Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048610.t1 | XP_013460271.1 | 98.9 | 464 | 5 | 0 | 4 | 467 | 41 | 504 | 4.60E-270 | 939.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048610.t1 | M0ZYF3 | 81.2 | 452 | 84 | 1 | 16 | 467 | 45 | 495 | 1.2e-223 | 776.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048610.t1 | A0A072UXK7 | 98.9 | 464 | 5 | 0 | 4 | 467 | 41 | 504 | 3.3e-270 | 939.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene048610 | MS.gene069940 | PPI |
| MS.gene048610 | MS.gene018389 | PPI |
| MS.gene048610 | MS.gene052562 | PPI |
| MS.gene048610 | MS.gene009833 | PPI |
| MS.gene048610 | MS.gene53986 | PPI |
| MS.gene064199 | MS.gene048610 | PPI |
| MS.gene046054 | MS.gene048610 | PPI |
| MS.gene57946 | MS.gene048610 | PPI |
| MS.gene048610 | MS.gene066720 | PPI |
| MS.gene048480 | MS.gene048610 | PPI |
| MS.gene048610 | MS.gene012456 | PPI |
| MS.gene50180 | MS.gene048610 | PPI |
| MS.gene048610 | MS.gene03971 | PPI |
| MS.gene01745 | MS.gene048610 | PPI |
| MS.gene048610 | MS.gene002362 | PPI |
| MS.gene01336 | MS.gene048610 | PPI |
| MS.gene02306 | MS.gene048610 | PPI |
| MS.gene048610 | MS.gene57021 | PPI |
| MS.gene035652 | MS.gene048610 | PPI |
| MS.gene009833 | MS.gene048610 | PPI |
| MS.gene32211 | MS.gene048610 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048610.t1 | MTR_3g464380 | 98.922 | 464 | 5 | 0 | 4 | 467 | 41 | 504 | 0.0 | 949 |
| MS.gene048610.t1 | MTR_5g071250 | 83.036 | 448 | 76 | 0 | 20 | 467 | 54 | 501 | 0.0 | 775 |
| MS.gene048610.t1 | MTR_4g090580 | 73.289 | 453 | 120 | 1 | 15 | 467 | 92 | 543 | 0.0 | 710 |
| MS.gene048610.t1 | MTR_5g071250 | 86.471 | 340 | 46 | 0 | 20 | 359 | 54 | 393 | 0.0 | 600 |
| MS.gene048610.t1 | MTR_2g011730 | 38.095 | 357 | 203 | 9 | 18 | 364 | 42 | 390 | 8.05e-74 | 243 |
| MS.gene048610.t1 | MTR_2g011730 | 37.190 | 121 | 65 | 4 | 352 | 467 | 464 | 578 | 2.55e-11 | 66.2 |
| MS.gene048610.t1 | MTR_4g045997 | 40.181 | 331 | 182 | 8 | 21 | 341 | 48 | 372 | 1.02e-72 | 239 |
| MS.gene048610.t1 | MTR_4g091240 | 39.938 | 323 | 181 | 7 | 29 | 341 | 51 | 370 | 1.65e-72 | 239 |
| MS.gene048610.t1 | MTR_4g091240 | 36.364 | 121 | 66 | 4 | 352 | 467 | 464 | 578 | 2.20e-11 | 66.2 |
| MS.gene048610.t1 | MTR_4g045997 | 40.181 | 331 | 182 | 8 | 21 | 341 | 48 | 372 | 1.83e-72 | 239 |
| MS.gene048610.t1 | MTR_4g045997 | 34.483 | 145 | 67 | 5 | 339 | 467 | 445 | 577 | 1.80e-14 | 76.3 |
| MS.gene048610.t1 | MTR_4g045993 | 37.883 | 359 | 196 | 10 | 29 | 371 | 44 | 391 | 1.59e-70 | 234 |
| MS.gene048610.t1 | MTR_4g091240 | 37.218 | 266 | 156 | 6 | 86 | 341 | 2 | 266 | 2.65e-51 | 181 |
| MS.gene048610.t1 | MTR_4g091240 | 35.772 | 123 | 64 | 4 | 352 | 467 | 360 | 474 | 1.44e-11 | 66.6 |
| MS.gene048610.t1 | MTR_0931s0010 | 29.724 | 434 | 267 | 13 | 38 | 467 | 243 | 642 | 2.16e-38 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048610.t1 | AT1G07180 | 79.341 | 455 | 93 | 1 | 13 | 467 | 57 | 510 | 0.0 | 748 |
| MS.gene048610.t1 | AT2G29990 | 79.212 | 457 | 91 | 1 | 15 | 467 | 52 | 508 | 0.0 | 744 |
| MS.gene048610.t1 | AT4G28220 | 39.198 | 324 | 181 | 6 | 33 | 345 | 52 | 370 | 2.19e-72 | 237 |
| MS.gene048610.t1 | AT4G28220 | 39.198 | 324 | 181 | 6 | 33 | 345 | 52 | 370 | 5.35e-72 | 238 |
| MS.gene048610.t1 | AT4G28220 | 37.705 | 122 | 65 | 4 | 351 | 467 | 456 | 571 | 2.58e-13 | 72.4 |
| MS.gene048610.t1 | AT4G21490 | 37.249 | 349 | 206 | 6 | 30 | 369 | 55 | 399 | 1.42e-64 | 219 |
| MS.gene048610.t1 | AT4G21490 | 37.429 | 350 | 203 | 7 | 30 | 369 | 55 | 398 | 4.57e-64 | 217 |
| MS.gene048610.t1 | AT4G05020 | 38.820 | 322 | 183 | 6 | 29 | 341 | 57 | 373 | 1.10e-63 | 216 |
| MS.gene048610.t1 | AT2G20800 | 39.506 | 324 | 182 | 6 | 27 | 341 | 60 | 378 | 1.86e-63 | 216 |
| MS.gene048610.t1 | AT2G20800 | 36.885 | 122 | 66 | 4 | 351 | 467 | 467 | 582 | 5.04e-13 | 71.6 |
| MS.gene048610.t1 | AT4G05020 | 38.820 | 322 | 183 | 6 | 29 | 341 | 57 | 373 | 1.89e-63 | 216 |
| MS.gene048610.t1 | AT5G08740 | 25.268 | 467 | 263 | 19 | 28 | 455 | 78 | 497 | 9.36e-19 | 89.4 |
Find 108 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTCCACCAGGAGCTTT+TGG | 0.230258 | 3.1:+48309637 | None:intergenic |
| GGATCGCATCCTTCTACTTT+TGG | 0.230307 | 3.1:-48310879 | MS.gene048610:CDS |
| GTCACCAATTATTCAATCTT+TGG | 0.234216 | 3.1:-48309665 | MS.gene048610:CDS |
| TGAGGTTCCATTTGGTTTGC+TGG | 0.243195 | 3.1:-48309710 | MS.gene048610:CDS |
| TATGGTGTTTACACCTCTTT+TGG | 0.265050 | 3.1:-48311675 | MS.gene048610:CDS |
| TTCCATTTGGTTTGCTGGTA+TGG | 0.285985 | 3.1:-48309705 | MS.gene048610:CDS |
| GAATTCAACCTGCTATTTCT+AGG | 0.287275 | 3.1:-48311598 | MS.gene048610:CDS |
| AAGCCTAATGATTATCCTTC+AGG | 0.297969 | 3.1:-48311827 | MS.gene048610:CDS |
| GGTTTCTCATGAGGCTTTGT+TGG | 0.310538 | 3.1:+48311797 | None:intergenic |
| TAATTACCTTGCTTTGTCTA+AGG | 0.315766 | 3.1:+48309059 | None:intergenic |
| GAACCTCAGTACCATCATTT+AGG | 0.327904 | 3.1:+48309725 | None:intergenic |
| AGGTCCAAAGATTGAATAAT+TGG | 0.328338 | 3.1:+48309661 | None:intergenic |
| AGAGTGGTTGTGCTTGGTTC+AGG | 0.350172 | 3.1:-48311773 | MS.gene048610:CDS |
| TGGATTACAACTCTTATATT+CGG | 0.358788 | 3.1:-48308842 | MS.gene048610:CDS |
| CACTGTGTTGTTGTGGGAGG+TGG | 0.366862 | 3.1:-48310355 | MS.gene048610:CDS |
| GATTCTATGTATTTGTCAAC+TGG | 0.372762 | 3.1:-48308862 | MS.gene048610:CDS |
| AAACCTGAAGGATAATCATT+AGG | 0.377669 | 3.1:+48311824 | None:intergenic |
| GCAGGTTGAATTCTTCCAAT+AGG | 0.380849 | 3.1:+48311608 | None:intergenic |
| GTGCTTGGTTCAGGTTGGGC+TGG | 0.384619 | 3.1:-48311764 | MS.gene048610:CDS |
| GCAAGTATGTTAAACAAAAT+CGG | 0.386864 | 3.1:-48309196 | MS.gene048610:CDS |
| TAATGATTATCCTTCAGGTT+TGG | 0.388322 | 3.1:-48311822 | MS.gene048610:CDS |
| TTGATGCTATCTGATGTTCC+AGG | 0.392069 | 3.1:-48310774 | MS.gene048610:intron |
| CTGCAGACTCATGAAGGGTT+TGG | 0.398675 | 3.1:-48311741 | MS.gene048610:CDS |
| TGCATCAATGGCAGTACAAT+TGG | 0.399061 | 3.1:+48311550 | None:intergenic |
| ATCACAGGTGGCAGAGAGAC+AGG | 0.415856 | 3.1:-48309230 | MS.gene048610:intron |
| GGTTTGCTGGTATGGTCTAC+TGG | 0.419015 | 3.1:-48309697 | MS.gene048610:CDS |
| CTCGGCAGCATGGCAACTAT+TGG | 0.420711 | 3.1:-48309103 | MS.gene048610:CDS |
| GATGGTACTGAGGTTCCATT+TGG | 0.422519 | 3.1:-48309718 | MS.gene048610:CDS |
| GTACAAGATGTGTTCTCAAT+AGG | 0.425903 | 3.1:-48309476 | MS.gene048610:CDS |
| CCTTGAATTCCAAAAGTAGA+AGG | 0.426636 | 3.1:+48310870 | None:intergenic |
| AGATCAGTTGCTGAACCTAT+TGG | 0.427288 | 3.1:-48311623 | MS.gene048610:CDS |
| CCGAGATGCTTGTAAACAAA+TGG | 0.435027 | 3.1:+48309121 | None:intergenic |
| GGTTGTGCTTGGTTCAGGTT+GGG | 0.436398 | 3.1:-48311768 | MS.gene048610:CDS |
| ATGATCATGCAGGAAGGAAA+AGG | 0.437871 | 3.1:-48308962 | MS.gene048610:intron |
| GAACCAAGCACAACCACTCT+TGG | 0.442260 | 3.1:+48311776 | None:intergenic |
| CCTGCTATTTCTAGGGAGCC+TGG | 0.442612 | 3.1:-48311590 | MS.gene048610:CDS |
| TTTCAGCTCCCAACCTATTG+AGG | 0.459475 | 3.1:-48311864 | MS.gene048610:intron |
| TCACTTACTTGGGCCAATGC+TGG | 0.460907 | 3.1:+48309410 | None:intergenic |
| TGAGTGGCTTCGTGTTCCTT+CGG | 0.474068 | 3.1:-48309498 | MS.gene048610:CDS |
| GGCTGGCTGCAGACTCATGA+AGG | 0.474970 | 3.1:-48311747 | MS.gene048610:CDS |
| AAAGAGGTGTAAACACCATA+TGG | 0.476687 | 3.1:+48311678 | None:intergenic |
| CATCAGATAGCATCAAGTTA+AGG | 0.478406 | 3.1:+48310781 | None:intergenic |
| GTTGTGGGAGGTGGTCCTAC+AGG | 0.481106 | 3.1:-48310346 | MS.gene048610:CDS |
| GGAAAAGGGTTAGCGCTGGC+GGG | 0.482876 | 3.1:-48308947 | MS.gene048610:CDS |
| AGTGGATTTGTTGAAAGTAC+TGG | 0.494829 | 3.1:-48309446 | MS.gene048610:CDS |
| TGGTTGTGCTTGGTTCAGGT+TGG | 0.498529 | 3.1:-48311769 | MS.gene048610:CDS |
| CGTATGGTTATGTGCATCAA+TGG | 0.499458 | 3.1:+48311538 | None:intergenic |
| GACCATACCAGCAAACCAAA+TGG | 0.501285 | 3.1:+48309703 | None:intergenic |
| CTGGTATGGTCTACTGGCGT+TGG | 0.502336 | 3.1:-48309691 | MS.gene048610:CDS |
| TCAGGAGTTCGTCTTGTTCG+TGG | 0.502386 | 3.1:-48309781 | MS.gene048610:CDS |
| AATTCAACCTGCTATTTCTA+GGG | 0.505654 | 3.1:-48311597 | MS.gene048610:CDS |
| TTCATAGTCTGCTTATATCA+CGG | 0.508536 | 3.1:+48308819 | None:intergenic |
| TTAAACAAAATCGGTAAAGA+AGG | 0.508620 | 3.1:-48309187 | MS.gene048610:CDS |
| ATATTACACGGGTAGTCAGC+TGG | 0.513296 | 3.1:-48308892 | MS.gene048610:CDS |
| TTGGACCTCCCAAAAGCTCC+TGG | 0.516708 | 3.1:-48309646 | MS.gene048610:CDS |
| GTAAACACCATATGGTTCCT+AGG | 0.522344 | 3.1:+48311686 | None:intergenic |
| CAGAAGATTATCCTAAATGA+TGG | 0.528034 | 3.1:-48309736 | MS.gene048610:CDS |
| TGGGCCAATGCTGGAAGTGT+TGG | 0.528759 | 3.1:+48309419 | None:intergenic |
| TGTCTCACCTAGGAACCATA+TGG | 0.529363 | 3.1:-48311693 | MS.gene048610:CDS |
| AGGAAAAGGGTTAGCGCTGG+CGG | 0.536491 | 3.1:-48308948 | MS.gene048610:CDS |
| ACCACTCTTGGTTTCTCATG+AGG | 0.542964 | 3.1:+48311788 | None:intergenic |
| TGATCATGCAGGAAGGAAAA+GGG | 0.544040 | 3.1:-48308961 | MS.gene048610:intron |
| GGCAACTATTGGCAGATACA+AGG | 0.545899 | 3.1:-48309092 | MS.gene048610:CDS |
| AAGACCAACACTTCCAGCAT+TGG | 0.547283 | 3.1:-48309423 | MS.gene048610:CDS |
| GCTTACCTTTGTCAACTGCT+TGG | 0.548605 | 3.1:+48310032 | None:intergenic |
| CCATTTGTTTACAAGCATCT+CGG | 0.554838 | 3.1:-48309121 | MS.gene048610:CDS |
| TCCCAAAAGCTCCTGGTGGA+AGG | 0.560517 | 3.1:-48309639 | MS.gene048610:intron |
| TGTTGACCTTAGACAAAGCA+AGG | 0.561928 | 3.1:-48309065 | MS.gene048610:intron |
| ACTAGAGAACTAGCATGGCT+TGG | 0.563946 | 3.1:-48311988 | None:intergenic |
| TATGAGACTGTAAACTTCCA+AGG | 0.564634 | 3.1:+48310924 | None:intergenic |
| GCTGGCTGCAGACTCATGAA+GGG | 0.572061 | 3.1:-48311746 | MS.gene048610:CDS |
| CAGCAACTGATCTAAACTCA+AGG | 0.573354 | 3.1:+48311633 | None:intergenic |
| AAACCAAGAGTGGTTGTGCT+TGG | 0.573517 | 3.1:-48311779 | MS.gene048610:CDS |
| TTTGTTGGTTCCAAACCTGA+AGG | 0.573663 | 3.1:+48311812 | None:intergenic |
| GGAAGGAAAAGGGTTAGCGC+TGG | 0.575536 | 3.1:-48308951 | MS.gene048610:CDS |
| CCAGGCTCCCTAGAAATAGC+AGG | 0.576342 | 3.1:+48311590 | None:intergenic |
| AGTGCAAAAGAAATAGAACT+TGG | 0.578815 | 3.1:-48309148 | MS.gene048610:CDS |
| CCACTGAATTCAACTCCTGT+AGG | 0.581407 | 3.1:+48310331 | None:intergenic |
| TTGCACTGTGTTGTTGTGGG+AGG | 0.583309 | 3.1:-48310358 | MS.gene048610:CDS |
| GAGAGCAGACAATAGAACCT+TGG | 0.585195 | 3.1:-48310941 | MS.gene048610:CDS |
| ACAGGATTGGTGTTGATGAG+TGG | 0.587559 | 3.1:-48309514 | MS.gene048610:intron |
| CACTGTGAGACTGTAACTGA+TGG | 0.590761 | 3.1:-48310963 | MS.gene048610:CDS |
| AAAGATTGAATAATTGGTGA+CGG | 0.592765 | 3.1:+48309667 | None:intergenic |
| TTTCTGAAGATGAGAAGCAA+AGG | 0.593111 | 3.1:-48310384 | MS.gene048610:CDS |
| CATCCGTGTTACTTTAATCG+AGG | 0.598262 | 3.1:-48310248 | MS.gene048610:intron |
| CATTGATGCACATAACCATA+CGG | 0.599716 | 3.1:-48311537 | MS.gene048610:intron |
| AAAATCGGTAAAGAAGGTGC+AGG | 0.602349 | 3.1:-48309181 | MS.gene048610:CDS |
| ATCATGCACAAGAAATTCGT+CGG | 0.602396 | 3.1:-48310812 | MS.gene048610:CDS |
| ACACAAGTAGAAGCCAAAAG+AGG | 0.602639 | 3.1:+48311662 | None:intergenic |
| ACATTGTTTGTGTCTCACCT+AGG | 0.614839 | 3.1:-48311703 | MS.gene048610:CDS |
| TCAAAGATATACTCATGTGA+AGG | 0.617326 | 3.1:-48310275 | MS.gene048610:CDS |
| GAGAACACATCTTGTACCGA+AGG | 0.617580 | 3.1:+48309482 | None:intergenic |
| AGCAACTGATCTAAACTCAA+GGG | 0.634870 | 3.1:+48311634 | None:intergenic |
| GGCGCTCGGCGTATATTACA+CGG | 0.638294 | 3.1:-48308904 | MS.gene048610:CDS |
| TTACAAGCATCTCGGCAGCA+TGG | 0.640886 | 3.1:-48309113 | MS.gene048610:CDS |
| TGCTACCAAGCAGTTGACAA+AGG | 0.642265 | 3.1:-48310037 | MS.gene048610:intron |
| GACCTCCCAAAAGCTCCTGG+TGG | 0.643228 | 3.1:-48309643 | MS.gene048610:CDS |
| TCACAGGTGGCAGAGAGACA+GGG | 0.659781 | 3.1:-48309229 | MS.gene048610:intron |
| GATAAACTAGTAATTGCACT+AGG | 0.660634 | 3.1:-48310900 | MS.gene048610:CDS |
| GCCTCATGAGAAACCAAGAG+TGG | 0.663315 | 3.1:-48311789 | MS.gene048610:CDS |
| GCAAGAAAGAAATAAGAACC+AGG | 0.666804 | 3.1:+48311572 | None:intergenic |
| CCTACAGGAGTTGAATTCAG+TGG | 0.673990 | 3.1:-48310331 | MS.gene048610:CDS |
| TATCCTAAATGATGGTACTG+AGG | 0.675178 | 3.1:-48309728 | MS.gene048610:CDS |
| TATGAGACTAACCTTCCACC+AGG | 0.679101 | 3.1:+48309628 | None:intergenic |
| TTCTCAATAGGTGACTGCAG+TGG | 0.690005 | 3.1:-48309464 | MS.gene048610:CDS |
| GCGCTCGGCGTATATTACAC+GGG | 0.697292 | 3.1:-48308903 | MS.gene048610:CDS |
| ACACCTCGATTAAAGTAACA+CGG | 0.711753 | 3.1:+48310245 | None:intergenic |
| TTACACGGGTAGTCAGCTGG+AGG | 0.734155 | 3.1:-48308889 | MS.gene048610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGGAAAATATAAAAAAAATA+TGG | + | chr3.1:48310974-48310993 | None:intergenic | 10.0% |
| !! | TAATCTACTAAAACAAAAAT+TGG | + | chr3.1:48310621-48310640 | None:intergenic | 15.0% |
| !!! | GAGTTTTTAGTTTTTTTATT+TGG | - | chr3.1:48311869-48311888 | MS.gene048610:intron | 15.0% |
| !! | ACTAGAAAAAAATGATATCA+AGG | + | chr3.1:48309297-48309316 | None:intergenic | 20.0% |
| !! | ATATATGTAATAAAAGCCTA+TGG | - | chr3.1:48310592-48310611 | MS.gene048610:intron | 20.0% |
| !! | GAAAATTTGTATTTGATGTT+TGG | - | chr3.1:48309797-48309816 | MS.gene048610:intron | 20.0% |
| !!! | AAAAATGGATCAGTTTTATT+TGG | + | chr3.1:48308880-48308899 | None:intergenic | 20.0% |
| !!! | ATATTTTCTCAAATTCTTAC+TGG | + | chr3.1:48309481-48309500 | None:intergenic | 20.0% |
| !!! | TACTAGCATTATAATTTGTA+AGG | + | chr3.1:48310272-48310291 | None:intergenic | 20.0% |
| !!! | TATCTTAAGTTGTTTTTGAT+TGG | - | chr3.1:48310860-48310879 | MS.gene048610:CDS | 20.0% |
| ! | AAAGATGGTAAAAGGAAAAA+TGG | + | chr3.1:48308895-48308914 | None:intergenic | 25.0% |
| ! | AAAGATTGAATAATTGGTGA+CGG | + | chr3.1:48311130-48311149 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAGTTTA+AGG | - | chr3.1:48310218-48310237 | MS.gene048610:intron | 25.0% |
| ! | ACTGAGATAAACTACAATAT+TGG | + | chr3.1:48310994-48311013 | None:intergenic | 25.0% |
| ! | ACTTCAAATATCACTTACTT+GGG | + | chr3.1:48311397-48311416 | None:intergenic | 25.0% |
| ! | AGATATAAGTTTACTTGACA+CGG | + | chr3.1:48309377-48309396 | None:intergenic | 25.0% |
| ! | AGTTCAAATTCCAAAAAGAA+CGG | + | chr3.1:48309683-48309702 | None:intergenic | 25.0% |
| ! | GCAAGTATGTTAAACAAAAT+CGG | - | chr3.1:48311598-48311617 | MS.gene048610:CDS | 25.0% |
| ! | TAATATCTCATTTGCCTATT+AGG | + | chr3.1:48310708-48310727 | None:intergenic | 25.0% |
| ! | TACTTCAAATATCACTTACT+TGG | + | chr3.1:48311398-48311417 | None:intergenic | 25.0% |
| ! | TGGATTACAACTCTTATATT+CGG | - | chr3.1:48311952-48311971 | MS.gene048610:intron | 25.0% |
| ! | TTAAACAAAATCGGTAAAGA+AGG | - | chr3.1:48311607-48311626 | MS.gene048610:CDS | 25.0% |
| ! | TTGAATCTGAATACTTTGAT+TGG | - | chr3.1:48309506-48309525 | MS.gene048610:CDS | 25.0% |
| ! | TTGAGATGATTTAATGTTGT+TGG | + | chr3.1:48308854-48308873 | None:intergenic | 25.0% |
| ! | TTGTCATTAATCTATAAGCA+TGG | - | chr3.1:48310141-48310160 | MS.gene048610:intron | 25.0% |
| !! | AAAACATGAAATGAAAGTGT+TGG | + | chr3.1:48311429-48311448 | None:intergenic | 25.0% |
| !! | ACTTAGTGATTTTATCATGA+AGG | - | chr3.1:48310489-48310508 | MS.gene048610:intron | 25.0% |
| !! | TATAATTTGTAAGGCTGTTT+GGG | + | chr3.1:48310263-48310282 | None:intergenic | 25.0% |
| !! | TTATAATTTGTAAGGCTGTT+TGG | + | chr3.1:48310264-48310283 | None:intergenic | 25.0% |
| !!! | ATCACTTCTGTGTTTTATTT+TGG | - | chr3.1:48310378-48310397 | MS.gene048610:CDS | 25.0% |
| !!! | TATTTGATGTTTGGTTTTGA+AGG | - | chr3.1:48309806-48309825 | MS.gene048610:intron | 25.0% |
| !!! | TTTTCCAGAAAGTTTGTTTT+CGG | - | chr3.1:48311516-48311535 | MS.gene048610:intron | 25.0% |
| AAACAAAAATTGGCATCCAT+AGG | + | chr3.1:48310611-48310630 | None:intergenic | 30.0% | |
| AAACCTGAAGGATAATCATT+AGG | + | chr3.1:48308973-48308992 | None:intergenic | 30.0% | |
| AACATACTCTCCATAACTTA+AGG | + | chr3.1:48309635-48309654 | None:intergenic | 30.0% | |
| ACATTTGATGCATTACCATT+TGG | - | chr3.1:48311539-48311558 | MS.gene048610:CDS | 30.0% | |
| AGATGGACAAAATATGTTGA+AGG | + | chr3.1:48309410-48309429 | None:intergenic | 30.0% | |
| AGGTCCAAAGATTGAATAAT+TGG | + | chr3.1:48311136-48311155 | None:intergenic | 30.0% | |
| AGTGCAAAAGAAATAGAACT+TGG | - | chr3.1:48311646-48311665 | MS.gene048610:CDS | 30.0% | |
| CAATTTCTTCATGTCCTAAT+AGG | - | chr3.1:48310691-48310710 | MS.gene048610:intron | 30.0% | |
| CAGAAGATTATCCTAAATGA+TGG | - | chr3.1:48311058-48311077 | MS.gene048610:intron | 30.0% | |
| CTAGAATATTGTAACAAACC+TGG | + | chr3.1:48310041-48310060 | None:intergenic | 30.0% | |
| CTATTAGGACATGAAGAAAT+TGG | + | chr3.1:48310693-48310712 | None:intergenic | 30.0% | |
| GAAAAGTGAAAGATGGTAAA+AGG | + | chr3.1:48308903-48308922 | None:intergenic | 30.0% | |
| GACAAAATATGTTGAAGGAA+CGG | + | chr3.1:48309405-48309424 | None:intergenic | 30.0% | |
| GATAAACTAGTAATTGCACT+AGG | - | chr3.1:48309894-48309913 | MS.gene048610:intron | 30.0% | |
| GATTCTATGTATTTGTCAAC+TGG | - | chr3.1:48311932-48311951 | MS.gene048610:intron | 30.0% | |
| GGTAATAACAAGAAGACTAA+AGG | + | chr3.1:48311803-48311822 | None:intergenic | 30.0% | |
| GTCACCAATTATTCAATCTT+TGG | - | chr3.1:48311129-48311148 | MS.gene048610:intron | 30.0% | |
| GTTCAAATTCCAAAAAGAAC+GGG | + | chr3.1:48309682-48309701 | None:intergenic | 30.0% | |
| TAATTACCTTGCTTTGTCTA+AGG | + | chr3.1:48311738-48311757 | None:intergenic | 30.0% | |
| TAGTAATGTCTTAGTTGACA+AGG | - | chr3.1:48310931-48310950 | MS.gene048610:CDS | 30.0% | |
| TATTGTAGTTTATCTCAGTC+AGG | - | chr3.1:48310995-48311014 | MS.gene048610:intron | 30.0% | |
| TCAAAGATATACTCATGTGA+AGG | - | chr3.1:48310519-48310538 | MS.gene048610:intron | 30.0% | |
| ! | ACATAATGCTTTTCCTCAAT+AGG | + | chr3.1:48308946-48308965 | None:intergenic | 30.0% |
| ! | ACTAATTTGTGTTGGAATGT+TGG | - | chr3.1:48309752-48309771 | MS.gene048610:CDS | 30.0% |
| ! | AGTGTGATACTAATTTGTGT+TGG | - | chr3.1:48309744-48309763 | MS.gene048610:CDS | 30.0% |
| ! | ATAAAGTTGCAGCTGATTTA+TGG | - | chr3.1:48311186-48311205 | MS.gene048610:intron | 30.0% |
| ! | ATTAGCTTAGAAGACATCTT+TGG | + | chr3.1:48310658-48310677 | None:intergenic | 30.0% |
| ! | TAATGATTATCCTTCAGGTT+TGG | - | chr3.1:48308972-48308991 | MS.gene048610:intron | 30.0% |
| ! | TGTTGTTGGAAAATTTTGAG+AGG | + | chr3.1:48308840-48308859 | None:intergenic | 30.0% |
| ! | TTAAGTTGCTTATCCAAACA+TGG | + | chr3.1:48310065-48310084 | None:intergenic | 30.0% |
| !! | AATTCAACCTGCTATTTCTA+GGG | - | chr3.1:48309197-48309216 | MS.gene048610:CDS | 30.0% |
| !! | ACAAACTCTTAGTCTTAGTA+TGG | - | chr3.1:48310316-48310335 | MS.gene048610:CDS | 30.0% |
| !! | CAGGTTTGTTACAATATTCT+AGG | - | chr3.1:48310039-48310058 | MS.gene048610:CDS | 30.0% |
| !!! | ACTGAATGTTATTTTCTCAC+AGG | - | chr3.1:48311262-48311281 | MS.gene048610:intron | 30.0% |
| !!! | ATGTTATTTTCTCACAGGAT+TGG | - | chr3.1:48311267-48311286 | MS.gene048610:intron | 30.0% |
| !!! | CTGTGTTTTATTTTGGATAC+AGG | - | chr3.1:48310385-48310404 | MS.gene048610:CDS | 30.0% |
| !!! | TAGTTTTTTTATTTGGCGCT+CGG | - | chr3.1:48311876-48311895 | MS.gene048610:intron | 30.0% |
| AACATTGTAGATTACCTCTC+CGG | + | chr3.1:48310172-48310191 | None:intergenic | 35.0% | |
| AAGCCTAATGATTATCCTTC+AGG | - | chr3.1:48308967-48308986 | MS.gene048610:intron | 35.0% | |
| AATGTCTTAGTTGACAAGGT+AGG | - | chr3.1:48310935-48310954 | MS.gene048610:CDS | 35.0% | |
| ACAATATTCTAGGCCATGTT+TGG | - | chr3.1:48310049-48310068 | MS.gene048610:CDS | 35.0% | |
| ACACCTCGATTAAAGTAACA+CGG | + | chr3.1:48310552-48310571 | None:intergenic | 35.0% | |
| ACACCTTCAATATTCAGTGT+CGG | - | chr3.1:48309566-48309585 | MS.gene048610:intron | 35.0% | |
| AGCAACTGATCTAAACTCAA+GGG | + | chr3.1:48309163-48309182 | None:intergenic | 35.0% | |
| ATCATGCACAAGAAATTCGT+CGG | - | chr3.1:48309982-48310001 | MS.gene048610:intron | 35.0% | |
| ATGAACTTCGCGAAGAAAAA+TGG | + | chr3.1:48309964-48309983 | None:intergenic | 35.0% | |
| ATGTCCGAAAACAAACTTTC+TGG | + | chr3.1:48311523-48311542 | None:intergenic | 35.0% | |
| CATCAGATAGCATCAAGTTA+AGG | + | chr3.1:48310016-48310035 | None:intergenic | 35.0% | |
| CATTACCATTTGGATATCAC+AGG | - | chr3.1:48311549-48311568 | MS.gene048610:CDS | 35.0% | |
| CATTGATGCACATAACCATA+CGG | - | chr3.1:48309257-48309276 | MS.gene048610:intron | 35.0% | |
| CCATTTGTTTACAAGCATCT+CGG | - | chr3.1:48311673-48311692 | MS.gene048610:CDS | 35.0% | |
| CCTTGAATTCCAAAAGTAGA+AGG | + | chr3.1:48309927-48309946 | None:intergenic | 35.0% | |
| GCAAGAAAGAAATAAGAACC+AGG | + | chr3.1:48309225-48309244 | None:intergenic | 35.0% | |
| GGTAAGCTATATCTTGATAG+AGG | - | chr3.1:48310778-48310797 | MS.gene048610:CDS | 35.0% | |
| GTACAAGATGTGTTCTCAAT+AGG | - | chr3.1:48311318-48311337 | MS.gene048610:intron | 35.0% | |
| TATCCTAAATGATGGTACTG+AGG | - | chr3.1:48311066-48311085 | MS.gene048610:intron | 35.0% | |
| TATGAGACTGTAAACTTCCA+AGG | + | chr3.1:48309873-48309892 | None:intergenic | 35.0% | |
| ! | AAAGAGGTGTAAACACCATA+TGG | + | chr3.1:48309119-48309138 | None:intergenic | 35.0% |
| ! | AATGCTTTTCCTCAATAGGT+TGG | + | chr3.1:48308942-48308961 | None:intergenic | 35.0% |
| ! | ATGCTTTTCCTCAATAGGTT+GGG | + | chr3.1:48308941-48308960 | None:intergenic | 35.0% |
| ! | CAATTTTGTCCCGTTCTTTT+TGG | - | chr3.1:48309670-48309689 | MS.gene048610:CDS | 35.0% |
| ! | TATGGTGTTTACACCTCTTT+TGG | - | chr3.1:48309119-48309138 | MS.gene048610:CDS | 35.0% |
| ! | TTTCTGAAGATGAGAAGCAA+AGG | - | chr3.1:48310410-48310429 | MS.gene048610:intron | 35.0% |
| !! | AGTGGATTTGTTGAAAGTAC+TGG | - | chr3.1:48311348-48311367 | MS.gene048610:intron | 35.0% |
| !! | CTGAATATTGAAGGTGTTTC+CGG | + | chr3.1:48309563-48309582 | None:intergenic | 35.0% |
| !! | GAATTCAACCTGCTATTTCT+AGG | - | chr3.1:48309196-48309215 | MS.gene048610:CDS | 35.0% |
| !! | GATAGAGGCATTTCTTCATT+AGG | - | chr3.1:48310793-48310812 | MS.gene048610:CDS | 35.0% |
| !! | GTATCACACTCTCTTTTTCA+AGG | + | chr3.1:48309734-48309753 | None:intergenic | 35.0% |
| !!! | CCTTCTACTTTTGGAATTCA+AGG | - | chr3.1:48309924-48309943 | MS.gene048610:intron | 35.0% |
| ACACAAGTAGAAGCCAAAAG+AGG | + | chr3.1:48309135-48309154 | None:intergenic | 40.0% | |
| ACATTGTAGATTACCTCTCC+GGG | + | chr3.1:48310171-48310190 | None:intergenic | 40.0% | |
| ACATTGTTTGTGTCTCACCT+AGG | - | chr3.1:48309091-48309110 | MS.gene048610:CDS | 40.0% | |
| AGATCAGTTGCTGAACCTAT+TGG | - | chr3.1:48309171-48309190 | MS.gene048610:CDS | 40.0% | |
| ATCTATAAGCATGGCTATCC+CGG | - | chr3.1:48310150-48310169 | MS.gene048610:intron | 40.0% | |
| ATGATCATGCAGGAAGGAAA+AGG | - | chr3.1:48311832-48311851 | MS.gene048610:CDS | 40.0% | |
| CAGCAACTGATCTAAACTCA+AGG | + | chr3.1:48309164-48309183 | None:intergenic | 40.0% | |
| CATCTTTCATGAGCTACTTC+TGG | - | chr3.1:48311764-48311783 | MS.gene048610:CDS | 40.0% | |
| CCGAGATGCTTGTAAACAAA+TGG | + | chr3.1:48311676-48311695 | None:intergenic | 40.0% | |
| CGTATGGTTATGTGCATCAA+TGG | + | chr3.1:48309259-48309278 | None:intergenic | 40.0% | |
| GAACCTCAGTACCATCATTT+AGG | + | chr3.1:48311072-48311091 | None:intergenic | 40.0% | |
| GTAAACACCATATGGTTCCT+AGG | + | chr3.1:48309111-48309130 | None:intergenic | 40.0% | |
| GTAACACATAACACACCGTA+TGG | + | chr3.1:48309275-48309294 | None:intergenic | 40.0% | |
| TACCATTTGGATATCACAGG+TGG | - | chr3.1:48311552-48311571 | MS.gene048610:CDS | 40.0% | |
| TACTAACATGTGTCAGAGAC+CGG | - | chr3.1:48309541-48309560 | MS.gene048610:intron | 40.0% | |
| TGATCATGCAGGAAGGAAAA+GGG | - | chr3.1:48311833-48311852 | MS.gene048610:CDS | 40.0% | |
| TGCATCAATGGCAGTACAAT+TGG | + | chr3.1:48309247-48309266 | None:intergenic | 40.0% | |
| TGGGAGAGAAAAGTGAAAGA+TGG | + | chr3.1:48308910-48308929 | None:intergenic | 40.0% | |
| TGTTGACCTTAGACAAAGCA+AGG | - | chr3.1:48311729-48311748 | MS.gene048610:CDS | 40.0% | |
| TTCCATATAAGCCAAACTGC+AGG | + | chr3.1:48309780-48309799 | None:intergenic | 40.0% | |
| TTGATGCTATCTGATGTTCC+AGG | - | chr3.1:48310020-48310039 | MS.gene048610:intron | 40.0% | |
| ! | AAAATCGGTAAAGAAGGTGC+AGG | - | chr3.1:48311613-48311632 | MS.gene048610:CDS | 40.0% |
| ! | AATAGGTTGGGAGCTGAAAT+GGG | + | chr3.1:48308929-48308948 | None:intergenic | 40.0% |
| ! | GCAGGTTGAATTCTTCCAAT+AGG | + | chr3.1:48309189-48309208 | None:intergenic | 40.0% |
| ! | GTGTGGACTACCTTAAGTTA+TGG | - | chr3.1:48309622-48309641 | MS.gene048610:intron | 40.0% |
| ! | TACCTGCAGTTTGGCTTATA+TGG | - | chr3.1:48309775-48309794 | MS.gene048610:CDS | 40.0% |
| ! | TTTTCCTTCCTGCATGATCA+TGG | + | chr3.1:48311833-48311852 | None:intergenic | 40.0% |
| !! | CATCCGTGTTACTTTAATCG+AGG | - | chr3.1:48310546-48310565 | MS.gene048610:intron | 40.0% |
| !! | CTTTTGCACTGTGTTGTTGT+GGG | - | chr3.1:48310433-48310452 | MS.gene048610:intron | 40.0% |
| !! | TACTTTGATTGGTGTCGTGT+CGG | - | chr3.1:48309517-48309536 | MS.gene048610:intron | 40.0% |
| !! | TTCCATTTGGTTTGCTGGTA+TGG | - | chr3.1:48311089-48311108 | MS.gene048610:intron | 40.0% |
| !! | TTTGTTGGTTCCAAACCTGA+AGG | + | chr3.1:48308985-48309004 | None:intergenic | 40.0% |
| !!! | CTTTTGGCTTCTACTTGTGT+CGG | - | chr3.1:48309135-48309154 | MS.gene048610:CDS | 40.0% |
| AAACCAAGAGTGGTTGTGCT+TGG | - | chr3.1:48309015-48309034 | MS.gene048610:intron | 45.0% | |
| AAGACCAACACTTCCAGCAT+TGG | - | chr3.1:48311371-48311390 | MS.gene048610:intron | 45.0% | |
| ACCACTCTTGGTTTCTCATG+AGG | + | chr3.1:48309009-48309028 | None:intergenic | 45.0% | |
| AGCAGCACTACTACGTCTAA+AGG | + | chr3.1:48311487-48311506 | None:intergenic | 45.0% | |
| ATAGGTCGCACACAAGTAGA+TGG | + | chr3.1:48309427-48309446 | None:intergenic | 45.0% | |
| ATATTACACGGGTAGTCAGC+TGG | - | chr3.1:48311902-48311921 | MS.gene048610:intron | 45.0% | |
| ATGAAACACTGACACGGCAA+TGG | - | chr3.1:48309445-48309464 | MS.gene048610:CDS | 45.0% | |
| CACTGTGAGACTGTAACTGA+TGG | - | chr3.1:48309831-48309850 | MS.gene048610:intron | 45.0% | |
| CCACTGAATTCAACTCCTGT+AGG | + | chr3.1:48310466-48310485 | None:intergenic | 45.0% | |
| CCTACAGGAGTTGAATTCAG+TGG | - | chr3.1:48310463-48310482 | MS.gene048610:intron | 45.0% | |
| CGACCTATGAAACACTGACA+CGG | - | chr3.1:48309439-48309458 | MS.gene048610:CDS | 45.0% | |
| CTTACCAACCATGATCATGC+AGG | - | chr3.1:48311822-48311841 | MS.gene048610:CDS | 45.0% | |
| GAATGTTGGTACCTGCAGTT+TGG | - | chr3.1:48309766-48309785 | MS.gene048610:CDS | 45.0% | |
| GACCATACCAGCAAACCAAA+TGG | + | chr3.1:48311094-48311113 | None:intergenic | 45.0% | |
| GAGAACACATCTTGTACCGA+AGG | + | chr3.1:48311315-48311334 | None:intergenic | 45.0% | |
| GAGAGCAGACAATAGAACCT+TGG | - | chr3.1:48309853-48309872 | MS.gene048610:intron | 45.0% | |
| GCAGCACTACTACGTCTAAA+GGG | + | chr3.1:48311486-48311505 | None:intergenic | 45.0% | |
| GCTTACCTTTGTCAACTGCT+TGG | + | chr3.1:48310765-48310784 | None:intergenic | 45.0% | |
| GGCAACTATTGGCAGATACA+AGG | - | chr3.1:48311702-48311721 | MS.gene048610:CDS | 45.0% | |
| TATGAGACTAACCTTCCACC+AGG | + | chr3.1:48311169-48311188 | None:intergenic | 45.0% | |
| TCATGAGCTACTTCTGGTGA+AGG | - | chr3.1:48311770-48311789 | MS.gene048610:CDS | 45.0% | |
| TCCACACTCAACACTCATAG+TGG | + | chr3.1:48309609-48309628 | None:intergenic | 45.0% | |
| TGCCACCTGTGATATCCAAA+TGG | + | chr3.1:48311557-48311576 | None:intergenic | 45.0% | |
| TGCTACCAAGCAGTTGACAA+AGG | - | chr3.1:48310757-48310776 | MS.gene048610:intron | 45.0% | |
| TGTCTCACCTAGGAACCATA+TGG | - | chr3.1:48309101-48309120 | MS.gene048610:CDS | 45.0% | |
| TTCTCAATAGGTGACTGCAG+TGG | - | chr3.1:48311330-48311349 | MS.gene048610:intron | 45.0% | |
| TTGCCGTGTCAGTGTTTCAT+AGG | + | chr3.1:48309445-48309464 | None:intergenic | 45.0% | |
| TTTCAGCTCCCAACCTATTG+AGG | - | chr3.1:48308930-48308949 | MS.gene048610:CDS | 45.0% | |
| ! | AGGCTGTTTGGGATAGCTTA+TGG | + | chr3.1:48310252-48310271 | None:intergenic | 45.0% |
| ! | CAATAGGTTGGGAGCTGAAA+TGG | + | chr3.1:48308930-48308949 | None:intergenic | 45.0% |
| ! | CTGCATGATCATGGTTGGTA+AGG | + | chr3.1:48311824-48311843 | None:intergenic | 45.0% |
| ! | GATGGTACTGAGGTTCCATT+TGG | - | chr3.1:48311076-48311095 | MS.gene048610:intron | 45.0% |
| ! | GCACCGACACTGAATATTGA+AGG | + | chr3.1:48309572-48309591 | None:intergenic | 45.0% |
| ! | GGATCGCATCCTTCTACTTT+TGG | - | chr3.1:48309915-48309934 | MS.gene048610:intron | 45.0% |
| ! | GGTTTCTCATGAGGCTTTGT+TGG | + | chr3.1:48309000-48309019 | None:intergenic | 45.0% |
| !! | ACAGGATTGGTGTTGATGAG+TGG | - | chr3.1:48311280-48311299 | MS.gene048610:intron | 45.0% |
| !! | ACCACTATGAGTGTTGAGTG+TGG | - | chr3.1:48309605-48309624 | MS.gene048610:intron | 45.0% |
| !! | GCTTTTGCACTGTGTTGTTG+TGG | - | chr3.1:48310432-48310451 | MS.gene048610:intron | 45.0% |
| !! | TGAGGTTCCATTTGGTTTGC+TGG | - | chr3.1:48311084-48311103 | MS.gene048610:intron | 45.0% |
| AGAGTGGTTGTGCTTGGTTC+AGG | - | chr3.1:48309021-48309040 | MS.gene048610:intron | 50.0% | |
| CCAACCATGATCATGCAGGA+AGG | - | chr3.1:48311826-48311845 | MS.gene048610:CDS | 50.0% | |
| CCTTCCTGCATGATCATGGT+TGG | + | chr3.1:48311829-48311848 | None:intergenic | 50.0% | |
| CTGCAGACTCATGAAGGGTT+TGG | - | chr3.1:48309053-48309072 | MS.gene048610:intron | 50.0% | |
| GAACCAAGCACAACCACTCT+TGG | + | chr3.1:48309021-48309040 | None:intergenic | 50.0% | |
| GCCTCATGAGAAACCAAGAG+TGG | - | chr3.1:48309005-48309024 | MS.gene048610:intron | 50.0% | |
| TCACTTACTTGGGCCAATGC+TGG | + | chr3.1:48311387-48311406 | None:intergenic | 50.0% | |
| TGAGTGGCTTCGTGTTCCTT+CGG | - | chr3.1:48311296-48311315 | MS.gene048610:intron | 50.0% | |
| TGGTTGTGCTTGGTTCAGGT+TGG | - | chr3.1:48309025-48309044 | MS.gene048610:intron | 50.0% | |
| TTACAAGCATCTCGGCAGCA+TGG | - | chr3.1:48311681-48311700 | MS.gene048610:CDS | 50.0% | |
| ! | AACCTTCCACCAGGAGCTTT+TGG | + | chr3.1:48311160-48311179 | None:intergenic | 50.0% |
| ! | ACCTTCCACCAGGAGCTTTT+GGG | + | chr3.1:48311159-48311178 | None:intergenic | 50.0% |
| ! | GGTTGTGCTTGGTTCAGGTT+GGG | - | chr3.1:48309026-48309045 | MS.gene048610:intron | 50.0% |
| ! | TCAGGAGTTCGTCTTGTTCG+TGG | - | chr3.1:48311013-48311032 | MS.gene048610:intron | 50.0% |
| ! | TTGCACTGTGTTGTTGTGGG+AGG | - | chr3.1:48310436-48310455 | MS.gene048610:intron | 50.0% |
| !! | GGTTTGCTGGTATGGTCTAC+TGG | - | chr3.1:48311097-48311116 | MS.gene048610:intron | 50.0% |
| ATCACAGGTGGCAGAGAGAC+AGG | - | chr3.1:48311564-48311583 | MS.gene048610:CDS | 55.0% | |
| CCAGGCTCCCTAGAAATAGC+AGG | + | chr3.1:48309207-48309226 | None:intergenic | 55.0% | |
| CTCGGCAGCATGGCAACTAT+TGG | - | chr3.1:48311691-48311710 | MS.gene048610:CDS | 55.0% | |
| CTGGTATGGTCTACTGGCGT+TGG | - | chr3.1:48311103-48311122 | MS.gene048610:intron | 55.0% | |
| GCGCTCGGCGTATATTACAC+GGG | - | chr3.1:48311891-48311910 | MS.gene048610:intron | 55.0% | |
| GCTGGCTGCAGACTCATGAA+GGG | - | chr3.1:48309048-48309067 | MS.gene048610:intron | 55.0% | |
| GGCGCTCGGCGTATATTACA+CGG | - | chr3.1:48311890-48311909 | MS.gene048610:intron | 55.0% | |
| TAAGCATGGCTATCCCGGAG+AGG | - | chr3.1:48310155-48310174 | MS.gene048610:intron | 55.0% | |
| TCACAGGTGGCAGAGAGACA+GGG | - | chr3.1:48311565-48311584 | MS.gene048610:CDS | 55.0% | |
| TCCCAAAAGCTCCTGGTGGA+AGG | - | chr3.1:48311155-48311174 | MS.gene048610:intron | 55.0% | |
| TTACACGGGTAGTCAGCTGG+AGG | - | chr3.1:48311905-48311924 | MS.gene048610:intron | 55.0% | |
| TTGGACCTCCCAAAAGCTCC+TGG | - | chr3.1:48311148-48311167 | MS.gene048610:intron | 55.0% | |
| ! | AGGAAAAGGGTTAGCGCTGG+CGG | - | chr3.1:48311846-48311865 | MS.gene048610:CDS | 55.0% |
| ! | CACTGTGTTGTTGTGGGAGG+TGG | - | chr3.1:48310439-48310458 | MS.gene048610:intron | 55.0% |
| ! | GGAAGGAAAAGGGTTAGCGC+TGG | - | chr3.1:48311843-48311862 | MS.gene048610:CDS | 55.0% |
| ! | TGGGCCAATGCTGGAAGTGT+TGG | + | chr3.1:48311378-48311397 | None:intergenic | 55.0% |
| ! | TTCCACCAGGAGCTTTTGGG+AGG | + | chr3.1:48311156-48311175 | None:intergenic | 55.0% |
| !! | CCTGCTATTTCTAGGGAGCC+TGG | - | chr3.1:48309204-48309223 | MS.gene048610:CDS | 55.0% |
| GACCTCCCAAAAGCTCCTGG+TGG | - | chr3.1:48311151-48311170 | MS.gene048610:intron | 60.0% | |
| GTTGTGGGAGGTGGTCCTAC+AGG | - | chr3.1:48310448-48310467 | MS.gene048610:intron | 60.0% | |
| ! | GGCTGGCTGCAGACTCATGA+AGG | - | chr3.1:48309047-48309066 | MS.gene048610:intron | 60.0% |
| !! | GGAAAAGGGTTAGCGCTGGC+GGG | - | chr3.1:48311847-48311866 | MS.gene048610:CDS | 60.0% |
| !! | GTGCTTGGTTCAGGTTGGGC+TGG | - | chr3.1:48309030-48309049 | MS.gene048610:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 48308820 | 48311996 | 48308820 | ID=MS.gene048610 |
| chr3.1 | mRNA | 48308820 | 48311996 | 48308820 | ID=MS.gene048610.t1;Parent=MS.gene048610 |
| chr3.1 | exon | 48311989 | 48311996 | 48311989 | ID=MS.gene048610.t1.exon1;Parent=MS.gene048610.t1 |
| chr3.1 | CDS | 48311989 | 48311996 | 48311989 | ID=cds.MS.gene048610.t1;Parent=MS.gene048610.t1 |
| chr3.1 | exon | 48311538 | 48311880 | 48311538 | ID=MS.gene048610.t1.exon2;Parent=MS.gene048610.t1 |
| chr3.1 | CDS | 48311538 | 48311880 | 48311538 | ID=cds.MS.gene048610.t1;Parent=MS.gene048610.t1 |
| chr3.1 | exon | 48310775 | 48310988 | 48310775 | ID=MS.gene048610.t1.exon3;Parent=MS.gene048610.t1 |
| chr3.1 | CDS | 48310775 | 48310988 | 48310775 | ID=cds.MS.gene048610.t1;Parent=MS.gene048610.t1 |
| chr3.1 | exon | 48310249 | 48310409 | 48310249 | ID=MS.gene048610.t1.exon4;Parent=MS.gene048610.t1 |
| chr3.1 | CDS | 48310249 | 48310409 | 48310249 | ID=cds.MS.gene048610.t1;Parent=MS.gene048610.t1 |
| chr3.1 | exon | 48310038 | 48310103 | 48310038 | ID=MS.gene048610.t1.exon5;Parent=MS.gene048610.t1 |
| chr3.1 | CDS | 48310038 | 48310103 | 48310038 | ID=cds.MS.gene048610.t1;Parent=MS.gene048610.t1 |
| chr3.1 | exon | 48309640 | 48309803 | 48309640 | ID=MS.gene048610.t1.exon6;Parent=MS.gene048610.t1 |
| chr3.1 | CDS | 48309640 | 48309803 | 48309640 | ID=cds.MS.gene048610.t1;Parent=MS.gene048610.t1 |
| chr3.1 | exon | 48309418 | 48309532 | 48309418 | ID=MS.gene048610.t1.exon7;Parent=MS.gene048610.t1 |
| chr3.1 | CDS | 48309418 | 48309532 | 48309418 | ID=cds.MS.gene048610.t1;Parent=MS.gene048610.t1 |
| chr3.1 | exon | 48309066 | 48309245 | 48309066 | ID=MS.gene048610.t1.exon8;Parent=MS.gene048610.t1 |
| chr3.1 | CDS | 48309066 | 48309245 | 48309066 | ID=cds.MS.gene048610.t1;Parent=MS.gene048610.t1 |
| chr3.1 | exon | 48308820 | 48308972 | 48308820 | ID=MS.gene048610.t1.exon9;Parent=MS.gene048610.t1 |
| chr3.1 | CDS | 48308820 | 48308972 | 48308820 | ID=cds.MS.gene048610.t1;Parent=MS.gene048610.t1 |
| Gene Sequence |
| Protein sequence |
