Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50180.t1 | XP_003615703.2 | 97.2 | 458 | 8 | 2 | 1 | 454 | 1 | 457 | 3.30E-256 | 894 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50180.t1 | O80874 | 72.5 | 465 | 116 | 3 | 1 | 454 | 1 | 464 | 8.2e-195 | 681.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50180.t1 | G7JZJ2 | 97.2 | 458 | 8 | 2 | 1 | 454 | 1 | 457 | 2.4e-256 | 894.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene50180 | MS.gene048480 | PPI |
| MS.gene50180 | MS.gene012456 | PPI |
| MS.gene50180 | MS.gene002362 | PPI |
| MS.gene50180 | MS.gene01336 | PPI |
| MS.gene50180 | MS.gene048610 | PPI |
| MS.gene50180 | MS.gene046054 | PPI |
| MS.gene50180 | MS.gene57021 | PPI |
| MS.gene50180 | MS.gene035652 | PPI |
| MS.gene50180 | MS.gene069940 | PPI |
| MS.gene50180 | MS.gene018389 | PPI |
| MS.gene50180 | MS.gene052562 | PPI |
| MS.gene50180 | MS.gene01745 | PPI |
| MS.gene50180 | MS.gene009833 | PPI |
| MS.gene50180 | MS.gene02306 | PPI |
| MS.gene50180 | MS.gene064199 | PPI |
| MS.gene50180 | MS.gene57946 | PPI |
| MS.gene50180 | MS.gene32211 | PPI |
| MS.gene50180 | MS.gene53986 | PPI |
| MS.gene50180 | MS.gene03971 | PPI |
| MS.gene50180 | MS.gene066720 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50180.t1 | MTR_5g071250 | 98.004 | 451 | 5 | 1 | 1 | 447 | 1 | 451 | 0.0 | 912 |
| MS.gene50180.t1 | MTR_5g071250 | 97.710 | 393 | 5 | 1 | 1 | 389 | 1 | 393 | 0.0 | 794 |
| MS.gene50180.t1 | MTR_3g464380 | 78.022 | 455 | 91 | 3 | 1 | 447 | 1 | 454 | 0.0 | 709 |
| MS.gene50180.t1 | MTR_4g090580 | 74.572 | 409 | 103 | 1 | 46 | 454 | 92 | 499 | 0.0 | 652 |
| MS.gene50180.t1 | MTR_4g045997 | 40.220 | 363 | 197 | 9 | 24 | 371 | 15 | 372 | 2.23e-75 | 248 |
| MS.gene50180.t1 | MTR_4g045997 | 40.220 | 363 | 197 | 9 | 24 | 371 | 15 | 372 | 4.32e-75 | 248 |
| MS.gene50180.t1 | MTR_2g011730 | 41.796 | 323 | 175 | 7 | 59 | 371 | 51 | 370 | 1.19e-73 | 244 |
| MS.gene50180.t1 | MTR_4g091240 | 41.176 | 323 | 177 | 7 | 59 | 371 | 51 | 370 | 1.03e-72 | 242 |
| MS.gene50180.t1 | MTR_4g045993 | 40.179 | 336 | 179 | 8 | 49 | 371 | 38 | 364 | 3.30e-70 | 235 |
| MS.gene50180.t1 | MTR_4g091240 | 37.594 | 266 | 155 | 6 | 116 | 371 | 2 | 266 | 3.97e-50 | 179 |
| MS.gene50180.t1 | MTR_0931s0010 | 28.571 | 385 | 243 | 10 | 68 | 448 | 243 | 599 | 1.63e-28 | 121 |
| MS.gene50180.t1 | MTR_8g094730 | 24.939 | 413 | 256 | 13 | 58 | 441 | 83 | 470 | 1.72e-12 | 70.1 |
| MS.gene50180.t1 | MTR_8g094730 | 24.939 | 413 | 256 | 13 | 58 | 441 | 83 | 470 | 1.88e-12 | 70.1 |
| MS.gene50180.t1 | MTR_8g094730 | 25.341 | 367 | 231 | 11 | 58 | 395 | 83 | 435 | 5.33e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50180.t1 | AT2G29990 | 72.473 | 465 | 116 | 3 | 1 | 454 | 1 | 464 | 0.0 | 673 |
| MS.gene50180.t1 | AT1G07180 | 73.423 | 444 | 102 | 2 | 26 | 454 | 24 | 466 | 0.0 | 658 |
| MS.gene50180.t1 | AT4G28220 | 40.184 | 326 | 175 | 8 | 63 | 375 | 52 | 370 | 9.68e-73 | 240 |
| MS.gene50180.t1 | AT4G28220 | 40.061 | 327 | 174 | 8 | 63 | 375 | 52 | 370 | 5.40e-72 | 240 |
| MS.gene50180.t1 | AT4G21490 | 38.440 | 359 | 210 | 6 | 43 | 393 | 38 | 393 | 7.51e-67 | 227 |
| MS.gene50180.t1 | AT4G21490 | 38.440 | 359 | 209 | 6 | 43 | 393 | 38 | 392 | 1.09e-66 | 226 |
| MS.gene50180.t1 | AT4G05020 | 40.810 | 321 | 178 | 6 | 59 | 371 | 57 | 373 | 3.15e-65 | 223 |
| MS.gene50180.t1 | AT4G05020 | 40.810 | 321 | 178 | 6 | 59 | 371 | 57 | 373 | 7.61e-65 | 222 |
| MS.gene50180.t1 | AT2G20800 | 32.752 | 516 | 278 | 14 | 10 | 497 | 5 | 479 | 4.64e-61 | 211 |
Find 139 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCTTCCACCAGGAGATTT+AGG | 0.197104 | 5.4:-62637420 | None:intergenic |
| CTCCTTGTTGTTCAGCTAAC+TGG | 0.234341 | 5.4:-62638951 | None:intergenic |
| CTCCTTGTTGTTCAGCTAAC+TGG | 0.234341 | 5.4:-62639050 | None:intergenic |
| GCATCGCAGCTCATTATTAA+AGG | 0.239399 | 5.4:+62638913 | MS.gene50180:intron |
| GCATCGCAGCTCATTATTAA+AGG | 0.239399 | 5.4:+62639012 | MS.gene50180:CDS |
| GATGAAGGGTTGGTGGTGTT+GGG | 0.253970 | 5.4:-62633707 | None:intergenic |
| GGAGCACAACCCACCACTTT+TGG | 0.268489 | 5.4:+62636505 | MS.gene50180:CDS |
| TTCCATATGGGTTGTTGGTT+TGG | 0.280912 | 5.4:+62637352 | MS.gene50180:CDS |
| ATGTTCAATTTGGTAGAAAT+TGG | 0.291264 | 5.4:+62639103 | MS.gene50180:CDS |
| AGATGAAGGGTTGGTGGTGT+TGG | 0.293102 | 5.4:-62633708 | None:intergenic |
| ATGAAGGGTTGGTGGTGTTG+GGG | 0.305167 | 5.4:-62633706 | None:intergenic |
| GGGTTGTTGGTTTGGTCTAC+TGG | 0.306576 | 5.4:+62637360 | MS.gene50180:CDS |
| TGGCATCAAGATTCAACTTT+AGG | 0.314908 | 5.4:+62639182 | MS.gene50180:CDS |
| TTCTTTCTTGCTAATTGTAC+TGG | 0.330871 | 5.4:+62634040 | MS.gene50180:CDS |
| ACCTTCCACCAGGAGATTTA+GGG | 0.336747 | 5.4:-62637419 | None:intergenic |
| TGTTACGTATATGTTCAATT+TGG | 0.338415 | 5.4:+62639093 | MS.gene50180:CDS |
| TGATTTGGATGCAGGGATTT+CGG | 0.349898 | 5.4:+62636698 | MS.gene50180:intron |
| TGAAGGGTTGGTGGTGTTGG+GGG | 0.359640 | 5.4:-62633705 | None:intergenic |
| AAGAGGATGGCAATAAAATA+TGG | 0.363264 | 5.4:+62639162 | MS.gene50180:CDS |
| AGATCCAGTGAGTGGATAAA+AGG | 0.364515 | 5.4:-62637396 | None:intergenic |
| GATAAGTTAGTAATTGCATT+AGG | 0.372684 | 5.4:+62636484 | MS.gene50180:CDS |
| TGAGGTTCCATATGGGTTGT+TGG | 0.390030 | 5.4:+62637347 | MS.gene50180:CDS |
| GAGAGAAGAGTGAGAGATGA+AGG | 0.394015 | 5.4:-62633722 | None:intergenic |
| GTACAAGATATCTTCTCAAT+AGG | 0.408338 | 5.4:+62637742 | MS.gene50180:CDS |
| GAATCTGCATCCGGCCCAAC+CGG | 0.410042 | 5.4:-62633846 | None:intergenic |
| GCTGTCTGCACGGCCTCCAT+TGG | 0.418506 | 5.4:-62638357 | None:intergenic |
| TAAAGCTCACCTTTGTCAAC+TGG | 0.420834 | 5.4:-62637155 | None:intergenic |
| GAAGGGTTGGTGGTGTTGGG+GGG | 0.423190 | 5.4:-62633704 | None:intergenic |
| GCGAACCGGAGCGGTTGAAC+CGG | 0.430398 | 5.4:-62633765 | None:intergenic |
| GTTCTCGGCACCGGTTGGGC+CGG | 0.434816 | 5.4:+62633836 | MS.gene50180:CDS |
| GCAGGTTGAATCCTTGCAAC+AGG | 0.435361 | 5.4:-62633992 | None:intergenic |
| CAACTGTTGCCATGCTTCCA+AGG | 0.436763 | 5.4:-62638421 | None:intergenic |
| TTGATGATGTCTGACGTTCC+AGG | 0.436902 | 5.4:+62636610 | MS.gene50180:CDS |
| TCGTGGCTTCTCGTGTGGTT+TGG | 0.441320 | 5.4:-62633807 | None:intergenic |
| TGCAATTACTAACTTATCAT+AGG | 0.442331 | 5.4:-62636479 | None:intergenic |
| GGATGCAGGGATTTCGGAAG+AGG | 0.444020 | 5.4:+62636704 | MS.gene50180:intron |
| CCTACGGGAGTTGAATTTAG+TGG | 0.445405 | 5.4:+62636768 | MS.gene50180:CDS |
| CGCTTCTCCACTTCAACACC+CGG | 0.450000 | 5.4:+62633746 | MS.gene50180:CDS |
| GAACACAGACACTGGATCCT+TGG | 0.451339 | 5.4:+62636443 | MS.gene50180:CDS |
| TATCCATGTTACTTTGATTG+AGG | 0.453761 | 5.4:+62636851 | MS.gene50180:CDS |
| GACCAAACCAACAACCCATA+TGG | 0.456250 | 5.4:-62637354 | None:intergenic |
| AAGAGTGAGAGATGAAGGGT+TGG | 0.459682 | 5.4:-62633717 | None:intergenic |
| CACCTTTGTCAACTGGTTGG+TGG | 0.460527 | 5.4:-62637148 | None:intergenic |
| CCAGGTTCTTTGGAAATAGC+AGG | 0.466685 | 5.4:-62634010 | None:intergenic |
| TTGGTTTGGTCTACTGGTGT+TGG | 0.469540 | 5.4:+62637366 | MS.gene50180:CDS |
| TTCAATTTGGTAGAAATTGG+TGG | 0.470878 | 5.4:+62639106 | MS.gene50180:CDS |
| AAGCCACGAGTGGTGGTTCT+CGG | 0.473117 | 5.4:+62633821 | MS.gene50180:CDS |
| GATGGTACTGAGGTTCCATA+TGG | 0.473808 | 5.4:+62637339 | MS.gene50180:CDS |
| TGAGTGGCTTCGTGTTCCTT+CGG | 0.474068 | 5.4:+62637720 | MS.gene50180:CDS |
| CCGGTTCGCTATGCGGCTCT+CGG | 0.474842 | 5.4:+62633779 | MS.gene50180:CDS |
| CCGAGAGCCGCATAGCGAAC+CGG | 0.477016 | 5.4:-62633779 | None:intergenic |
| ATGCAGATTCATGAAAGGAT+TGG | 0.478927 | 5.4:+62633859 | MS.gene50180:CDS |
| CACTGTGTGGTTGTCGGAGG+TGG | 0.479951 | 5.4:+62636744 | MS.gene50180:CDS |
| TCCTTTCATGAATCTGCATC+CGG | 0.482533 | 5.4:-62633855 | None:intergenic |
| CGAGTGGTGGTTCTCGGCAC+CGG | 0.482551 | 5.4:+62633827 | MS.gene50180:CDS |
| CTGGATCTCCCTAAATCTCC+TGG | 0.483676 | 5.4:+62637411 | MS.gene50180:CDS |
| AAAGTTACTTGGGCAAGAGC+TGG | 0.488874 | 5.4:-62637808 | None:intergenic |
| GGTGGTTCTCGGCACCGGTT+GGG | 0.489869 | 5.4:+62633832 | MS.gene50180:CDS |
| GTTGTCGGAGGTGGTCCTAC+GGG | 0.490066 | 5.4:+62636753 | MS.gene50180:CDS |
| TCGTGAAGTTTATCATGCAC+AGG | 0.493592 | 5.4:+62636561 | MS.gene50180:CDS |
| CTTCCTTTGATGACCGACTC+AGG | 0.494060 | 5.4:+62637118 | MS.gene50180:CDS |
| TGGTGGTTCTCGGCACCGGT+TGG | 0.494540 | 5.4:+62633831 | MS.gene50180:CDS |
| AAAGGAAGACAATATCTCAT+TGG | 0.494833 | 5.4:-62637103 | None:intergenic |
| AACACCCGGTTCAACCGCTC+CGG | 0.500329 | 5.4:+62633760 | MS.gene50180:CDS |
| GGCTTCTCGTGTGGTTTGGT+TGG | 0.502513 | 5.4:-62633803 | None:intergenic |
| CTGTTACACTGTGTGGTTGT+CGG | 0.506874 | 5.4:+62636738 | MS.gene50180:CDS |
| AGTGGATTTGTTGAAAGTAC+CGG | 0.512050 | 5.4:+62637772 | MS.gene50180:CDS |
| GGTTGTCGGAGGTGGTCCTA+CGG | 0.516435 | 5.4:+62636752 | MS.gene50180:CDS |
| ACCACTCGTGGCTTCTCGTG+TGG | 0.518284 | 5.4:-62633812 | None:intergenic |
| AGTGAGAGATGAAGGGTTGG+TGG | 0.519739 | 5.4:-62633714 | None:intergenic |
| GGGTTTGAGAAGTTGTTTCG+TGG | 0.521730 | 5.4:-62633684 | None:intergenic |
| TCAGGAGTGCGACTTGTTCG+TGG | 0.523879 | 5.4:+62637276 | MS.gene50180:CDS |
| CAGTTTGTTTACAAGCACCT+TGG | 0.525860 | 5.4:+62638404 | MS.gene50180:CDS |
| CCTGCTATTTCCAAAGAACC+TGG | 0.527740 | 5.4:+62634010 | MS.gene50180:CDS |
| TTTCGGAAGAGGAGAAGAAA+AGG | 0.527798 | 5.4:+62636715 | MS.gene50180:CDS |
| TGGGCAAGAGCTGGAAGTGT+TGG | 0.530653 | 5.4:-62637799 | None:intergenic |
| AGCATGAAAGATATAGACTT+GGG | 0.533211 | 5.4:+62638377 | MS.gene50180:CDS |
| CTCAAGAGTTCCAACACAAG+TGG | 0.536669 | 5.4:-62633951 | None:intergenic |
| GCAGCCTTGTTAAACAAAGT+AGG | 0.539948 | 5.4:+62638329 | MS.gene50180:CDS |
| TTACAAGCACCTTGGAAGCA+TGG | 0.546075 | 5.4:+62638412 | MS.gene50180:CDS |
| CGAACCGGAGCGGTTGAACC+GGG | 0.549006 | 5.4:-62633764 | None:intergenic |
| CAGCATGAAAGATATAGACT+TGG | 0.550417 | 5.4:+62638376 | MS.gene50180:CDS |
| AAAAGATAGCTTGAAGAGGA+TGG | 0.550590 | 5.4:+62639149 | MS.gene50180:CDS |
| AGAAATTGGTGGCACTTGAA+AGG | 0.553459 | 5.4:+62639117 | MS.gene50180:CDS |
| AACTCCATGAATTCCAAAAG+TGG | 0.557244 | 5.4:-62636518 | None:intergenic |
| CTTGGAAGCATGGCAACAGT+TGG | 0.557863 | 5.4:+62638422 | MS.gene50180:CDS |
| AGAGAAGAGTGAGAGATGAA+GGG | 0.558663 | 5.4:-62633721 | None:intergenic |
| TCCATGAATTCCAAAAGTGG+TGG | 0.567774 | 5.4:-62636515 | None:intergenic |
| TTCACCTACTTTGTTTAACA+AGG | 0.568346 | 5.4:-62638333 | None:intergenic |
| AAATTACCTTGTTCTGTCTG+AGG | 0.572657 | 5.4:-62638466 | None:intergenic |
| AACTGAAGGAACACAGACAC+TGG | 0.572704 | 5.4:+62636435 | MS.gene50180:CDS |
| TATCTTTCATGCTGTCTGCA+CGG | 0.573160 | 5.4:-62638367 | None:intergenic |
| TCCCTAAATCTCCTGGTGGA+AGG | 0.576208 | 5.4:+62637418 | MS.gene50180:CDS |
| TAGGAGATTGTAAACTTCCA+AGG | 0.576226 | 5.4:-62636460 | None:intergenic |
| GTGCCTGAGTCGGTCATCAA+AGG | 0.577551 | 5.4:-62637121 | None:intergenic |
| CGTCAGACATCATCAAATTG+AGG | 0.578854 | 5.4:-62636603 | None:intergenic |
| CTGTTGCTGAACCTGTTGCA+AGG | 0.583459 | 5.4:+62633981 | MS.gene50180:CDS |
| ACAGGATTGGTATTGATGAG+TGG | 0.585206 | 5.4:+62637704 | MS.gene50180:intron |
| TGTATCACCGCGTAATCACA+TGG | 0.586037 | 5.4:+62633907 | MS.gene50180:CDS |
| GGCAACAGTTGGAAGTTACA+AGG | 0.590642 | 5.4:+62638433 | MS.gene50180:CDS |
| GCCGGATGCAGATTCATGAA+AGG | 0.593084 | 5.4:+62633854 | MS.gene50180:CDS |
| GGTTGAACCGGGTGTTGAAG+TGG | 0.593883 | 5.4:-62633753 | None:intergenic |
| ATTTAGGGAGATCCAGTGAG+TGG | 0.595494 | 5.4:-62637404 | None:intergenic |
| ACACAAGTGGAAGCCAAAAG+AGG | 0.598929 | 5.4:-62633938 | None:intergenic |
| AGTGAGTGGATAAAAGGTGA+TGG | 0.604545 | 5.4:-62637390 | None:intergenic |
| ACACGAGAAGCCACGAGTGG+TGG | 0.605570 | 5.4:+62633814 | MS.gene50180:CDS |
| CCATGAATTCCAAAAGTGGT+GGG | 0.610117 | 5.4:-62636514 | None:intergenic |
| AGTAGACCTCAGACAGAACA+AGG | 0.610589 | 5.4:+62638460 | MS.gene50180:CDS |
| ATGGTACTGAGGTTCCATAT+GGG | 0.618943 | 5.4:+62637340 | MS.gene50180:CDS |
| GAGAAGATATCTTGTACCGA+AGG | 0.620961 | 5.4:-62637736 | None:intergenic |
| GCTCACCTTTGTCAACTGGT+TGG | 0.622023 | 5.4:-62637151 | None:intergenic |
| ACACAAAAGATAGCTTGAAG+AGG | 0.624375 | 5.4:+62639145 | MS.gene50180:CDS |
| AACAAAGTAGGTGAAGCCAA+TGG | 0.630315 | 5.4:+62638341 | MS.gene50180:CDS |
| TCAGAGATATGCTCATGTGA+AGG | 0.636417 | 5.4:+62636824 | MS.gene50180:CDS |
| AACCGCTCCGGTTCGCTATG+CGG | 0.638944 | 5.4:+62633772 | MS.gene50180:CDS |
| CCACTAAATTCAACTCCCGT+AGG | 0.642737 | 5.4:-62636768 | None:intergenic |
| TTCTCAATAGGTGACTGCAG+TGG | 0.644093 | 5.4:+62637754 | MS.gene50180:CDS |
| CAATGTGAGACTGTAACTGA+AGG | 0.645608 | 5.4:+62636421 | MS.gene50180:CDS |
| GAGGTTTCTAAACAAAGACA+TGG | 0.647360 | 5.4:-62633642 | None:intergenic |
| CCACAGGTAGCAGAGAGGCA+AGG | 0.650800 | 5.4:+62638296 | MS.gene50180:intron |
| GTGCCGAGAACCACCACTCG+TGG | 0.656504 | 5.4:-62633824 | None:intergenic |
| TATACTTAACGATGGTACTG+AGG | 0.661927 | 5.4:+62637329 | MS.gene50180:CDS |
| TGCCACCAACCAGTTGACAA+AGG | 0.666218 | 5.4:+62637146 | MS.gene50180:CDS |
| TATCAATGCTGATAAACATG+AGG | 0.672808 | 5.4:+62634063 | MS.gene50180:CDS |
| AAAGTAGGTGAAGCCAATGG+AGG | 0.673473 | 5.4:+62638344 | MS.gene50180:CDS |
| AGCCGCATAGCGAACCGGAG+CGG | 0.675373 | 5.4:-62633774 | None:intergenic |
| TTACACTGTGTGGTTGTCGG+AGG | 0.678237 | 5.4:+62636741 | MS.gene50180:CDS |
| GAGTAAACAAACCTTCCACC+AGG | 0.679279 | 5.4:-62637429 | None:intergenic |
| AAGAAGATTATACTTAACGA+TGG | 0.679351 | 5.4:+62637321 | MS.gene50180:CDS |
| GAAAAGGCTGTTACACTGTG+TGG | 0.679820 | 5.4:+62636731 | MS.gene50180:CDS |
| TGGTGGCATAGTGCCTGAGT+CGG | 0.683066 | 5.4:-62637131 | None:intergenic |
| ACCACACGAGAAGCCACGAG+TGG | 0.687969 | 5.4:+62633811 | MS.gene50180:CDS |
| ATACCTCAATCAAAGTAACA+TGG | 0.690821 | 5.4:-62636854 | None:intergenic |
| TTCCAGTTAGCTGAACAACA+AGG | 0.692111 | 5.4:+62638949 | MS.gene50180:CDS |
| TTCCAGTTAGCTGAACAACA+AGG | 0.692111 | 5.4:+62639048 | MS.gene50180:CDS |
| GCATGAAAGATATAGACTTG+GGG | 0.694188 | 5.4:+62638378 | MS.gene50180:CDS |
| GATCTCCCTAAATCTCCTGG+TGG | 0.703535 | 5.4:+62637414 | MS.gene50180:CDS |
| GAACTCCACAGGTAGCAGAG+AGG | 0.756524 | 5.4:+62638291 | MS.gene50180:intron |
| GTGAAAACCATGTGATTACG+CGG | 0.767264 | 5.4:-62633914 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTCATTGTAATAATAAAA+TGG | + | chr5.4:62636956-62636975 | MS.gene50180:intron | 10.0% |
| !!! | TTTTATAATTGATATATTCA+GGG | - | chr5.4:62635550-62635569 | None:intergenic | 10.0% |
| !!! | TTTTTATAATTGATATATTC+AGG | - | chr5.4:62635551-62635570 | None:intergenic | 10.0% |
| !! | GTGTTAAAACATAATATATT+TGG | - | chr5.4:62637612-62637631 | None:intergenic | 15.0% |
| !! | TACAATTCTTATGAAAAATA+GGG | + | chr5.4:62636231-62636250 | MS.gene50180:intron | 15.0% |
| !! | TTACAATTCTTATGAAAAAT+AGG | + | chr5.4:62636230-62636249 | MS.gene50180:intron | 15.0% |
| !! | TTTCATATATAAATTGTAAC+CGG | + | chr5.4:62635469-62635488 | MS.gene50180:intron | 15.0% |
| !!! | TTGCTTTTAAAAACATAAAA+CGG | + | chr5.4:62638591-62638610 | MS.gene50180:intron | 15.0% |
| !! | AACTTAATTAAGCACTTATA+AGG | - | chr5.4:62638236-62638255 | None:intergenic | 20.0% |
| !! | AAGATAAGTTCAAATTTAGT+CGG | - | chr5.4:62638010-62638029 | None:intergenic | 20.0% |
| !! | AATTAGCAATTAACTAATCA+AGG | + | chr5.4:62634570-62634589 | MS.gene50180:intron | 20.0% |
| !! | AGAAATTTCAACATAAGAAA+AGG | - | chr5.4:62637251-62637270 | None:intergenic | 20.0% |
| !! | ATAAAATGTCACAACTAAAT+AGG | - | chr5.4:62638853-62638872 | None:intergenic | 20.0% |
| !! | ATATGAAATTGAATTTCCAT+TGG | - | chr5.4:62635457-62635476 | None:intergenic | 20.0% |
| !! | ATATGGATACATATAGTATT+CGG | + | chr5.4:62637523-62637542 | MS.gene50180:intron | 20.0% |
| !! | ATTAAGTTAATTATCCAAAC+AGG | + | chr5.4:62638248-62638267 | MS.gene50180:intron | 20.0% |
| !! | CATTAAAAGGTAACTTATTT+GGG | + | chr5.4:62635199-62635218 | MS.gene50180:intron | 20.0% |
| !! | TATGAAATTGAATTTCCATT+GGG | - | chr5.4:62635456-62635475 | None:intergenic | 20.0% |
| !! | TGAAAATTGAAACCATTAAA+AGG | + | chr5.4:62635186-62635205 | MS.gene50180:intron | 20.0% |
| !! | TGTTACAATGATTAATTTCA+AGG | - | chr5.4:62634395-62634414 | None:intergenic | 20.0% |
| !! | TTAAGTTAATTATCCAAACA+GGG | + | chr5.4:62638249-62638268 | MS.gene50180:intron | 20.0% |
| !! | TTTATCTCTTATGATAGAAA+TGG | + | chr5.4:62638177-62638196 | MS.gene50180:intron | 20.0% |
| !! | TTTCAATTTCATTGCTTATA+TGG | + | chr5.4:62634157-62634176 | MS.gene50180:intron | 20.0% |
| !!! | AGCAGAATATGAAAATTTTT+AGG | + | chr5.4:62638782-62638801 | MS.gene50180:intron | 20.0% |
| !!! | TTAGTTGTGACATTTTATTA+AGG | + | chr5.4:62638855-62638874 | MS.gene50180:intron | 20.0% |
| !!! | TTTCTTTTTGCATTTTTGTA+GGG | + | chr5.4:62635249-62635268 | MS.gene50180:intron | 20.0% |
| !!! | TTTTAGATATTTCATTGACT+AGG | + | chr5.4:62634209-62634228 | MS.gene50180:intron | 20.0% |
| !!! | TTTTCTTTTTGCATTTTTGT+AGG | + | chr5.4:62635248-62635267 | MS.gene50180:intron | 20.0% |
| !!! | TTTTTAAAAGCAACAACAAA+AGG | - | chr5.4:62638584-62638603 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTGTAATCCGT+GGG | - | chr5.4:62634763-62634782 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTGTAATCCG+TGG | - | chr5.4:62634764-62634783 | None:intergenic | 20.0% |
| ! | AACTAAGTGGAATTTATTTG+AGG | + | chr5.4:62635161-62635180 | MS.gene50180:intron | 25.0% |
| ! | AAGAAGATTATACTTAACGA+TGG | + | chr5.4:62637321-62637340 | MS.gene50180:CDS | 25.0% |
| ! | AATAAACTGAAAACAGCTTA+TGG | - | chr5.4:62638091-62638110 | None:intergenic | 25.0% |
| ! | AATTCTGATTCTTAGATATC+AGG | - | chr5.4:62634554-62634573 | None:intergenic | 25.0% |
| ! | ACATATTGAACAAACAGTAA+AGG | - | chr5.4:62637227-62637246 | None:intergenic | 25.0% |
| ! | ATACTTGGTTATTGTTGTAT+TGG | + | chr5.4:62635314-62635333 | MS.gene50180:intron | 25.0% |
| ! | ATGAAATTGAATTTCCATTG+GGG | - | chr5.4:62635455-62635474 | None:intergenic | 25.0% |
| ! | ATGTTCAATTTGGTAGAAAT+TGG | + | chr5.4:62639103-62639122 | MS.gene50180:CDS | 25.0% |
| ! | ATTAACAAAAGACACATTCT+AGG | - | chr5.4:62634331-62634350 | None:intergenic | 25.0% |
| ! | ATTAGTTAGGGTAGAATAAA+AGG | - | chr5.4:62635291-62635310 | None:intergenic | 25.0% |
| ! | ATTCTATGTAGCTATTAACT+GGG | + | chr5.4:62638730-62638749 | MS.gene50180:intron | 25.0% |
| ! | ATTGTAACATTGTGAATTCT+TGG | + | chr5.4:62634406-62634425 | MS.gene50180:intron | 25.0% |
| ! | CATATTGAACAAACAGTAAA+GGG | - | chr5.4:62637226-62637245 | None:intergenic | 25.0% |
| ! | CCATTAAAAGGTAACTTATT+TGG | + | chr5.4:62635198-62635217 | MS.gene50180:intron | 25.0% |
| ! | CTAAATTTGAACTTATCTTC+CGG | + | chr5.4:62638011-62638030 | MS.gene50180:intron | 25.0% |
| ! | GATAAGTTAGTAATTGCATT+AGG | + | chr5.4:62636484-62636503 | MS.gene50180:CDS | 25.0% |
| ! | TAACTGACTAAATTGTCATT+TGG | + | chr5.4:62634246-62634265 | MS.gene50180:intron | 25.0% |
| ! | TAGATATTATACACATGTTG+TGG | + | chr5.4:62636889-62636908 | MS.gene50180:intron | 25.0% |
| ! | TAGGTAAAATACTTTCAGAA+TGG | + | chr5.4:62638801-62638820 | MS.gene50180:intron | 25.0% |
| ! | TCAAGAAATGAAAGTTACTT+GGG | - | chr5.4:62637821-62637840 | None:intergenic | 25.0% |
| ! | TGCAATTACTAACTTATCAT+AGG | - | chr5.4:62636482-62636501 | None:intergenic | 25.0% |
| ! | TGTTACGTATATGTTCAATT+TGG | + | chr5.4:62639093-62639112 | MS.gene50180:CDS | 25.0% |
| ! | TTAACAAAAGACACATTCTA+GGG | - | chr5.4:62634330-62634349 | None:intergenic | 25.0% |
| ! | TTACAAGTTTACCACAAAAT+TGG | - | chr5.4:62637009-62637028 | None:intergenic | 25.0% |
| ! | TTATATGGTTTAGTTATGGT+TGG | + | chr5.4:62634172-62634191 | MS.gene50180:intron | 25.0% |
| ! | TTCAAGAAATGAAAGTTACT+TGG | - | chr5.4:62637822-62637841 | None:intergenic | 25.0% |
| ! | TTCATATTCTGCTTATATCA+CGG | - | chr5.4:62638775-62638794 | None:intergenic | 25.0% |
| ! | TTCTTAATAAGAATGATGAG+TGG | + | chr5.4:62634877-62634896 | MS.gene50180:intron | 25.0% |
| ! | TTGCTTATATGGTTTAGTTA+TGG | + | chr5.4:62634168-62634187 | MS.gene50180:intron | 25.0% |
| ! | TTTGTAATCTGTAACTGATT+TGG | + | chr5.4:62636683-62636702 | MS.gene50180:intron | 25.0% |
| !! | AACTGACTAAATTGTCATTT+GGG | + | chr5.4:62634247-62634266 | MS.gene50180:intron | 25.0% |
| !! | CCAAATAAGTTACCTTTTAA+TGG | - | chr5.4:62635201-62635220 | None:intergenic | 25.0% |
| !! | TGATTTTTGTCTCAAACTTT+AGG | + | chr5.4:62634814-62634833 | MS.gene50180:intron | 25.0% |
| !! | TGTTACAATTTTGTTAGTCA+CGG | - | chr5.4:62635943-62635962 | None:intergenic | 25.0% |
| !!! | AAGCATTATTTTTCAAACAC+AGG | - | chr5.4:62636650-62636669 | None:intergenic | 25.0% |
| !!! | AATGTGTTACTTTCTTTACT+TGG | + | chr5.4:62637916-62637935 | MS.gene50180:intron | 25.0% |
| !!! | TTGCATTTATTTTCTTTCCA+TGG | + | chr5.4:62637462-62637481 | MS.gene50180:intron | 25.0% |
| !!! | TTGGTTTTAGTTTAACACTA+GGG | + | chr5.4:62637861-62637880 | MS.gene50180:intron | 25.0% |
| !!! | TTTGGTTTTAGTTTAACACT+AGG | + | chr5.4:62637860-62637879 | MS.gene50180:intron | 25.0% |
| AAAATACTTTCAGAATGGCT+AGG | + | chr5.4:62638806-62638825 | MS.gene50180:intron | 30.0% | |
| AAAGGAAGACAATATCTCAT+TGG | - | chr5.4:62637106-62637125 | None:intergenic | 30.0% | |
| AACCAAGTATCTCATTAGTT+AGG | - | chr5.4:62635304-62635323 | None:intergenic | 30.0% | |
| AACCCAAATGACTATTTACT+CGG | - | chr5.4:62635496-62635515 | None:intergenic | 30.0% | |
| AAGAGGATGGCAATAAAATA+TGG | + | chr5.4:62639162-62639181 | MS.gene50180:CDS | 30.0% | |
| ACACAAGAATTGTTAGCAAT+TGG | - | chr5.4:62634671-62634690 | None:intergenic | 30.0% | |
| ACCAAATAAGCCTCAATAAA+AGG | - | chr5.4:62638506-62638525 | None:intergenic | 30.0% | |
| ACCAAGTATCTCATTAGTTA+GGG | - | chr5.4:62635303-62635322 | None:intergenic | 30.0% | |
| ACCGTTGCAAAATTTACAAT+TGG | + | chr5.4:62637488-62637507 | MS.gene50180:intron | 30.0% | |
| ACTAGAAAAAGACACATTTG+AGG | - | chr5.4:62635577-62635596 | None:intergenic | 30.0% | |
| AGAAAGTAACACATTCAGAA+TGG | - | chr5.4:62637911-62637930 | None:intergenic | 30.0% | |
| AGAACAGTGTTATAAAAACC+AGG | - | chr5.4:62636274-62636293 | None:intergenic | 30.0% | |
| AGCATGAAAGATATAGACTT+GGG | + | chr5.4:62638377-62638396 | MS.gene50180:CDS | 30.0% | |
| AGTTATGGTTGGAGAAAAAA+AGG | + | chr5.4:62634183-62634202 | MS.gene50180:intron | 30.0% | |
| ATACCTCAATCAAAGTAACA+TGG | - | chr5.4:62636857-62636876 | None:intergenic | 30.0% | |
| ATATCAACTTAGCGTCTATT+TGG | + | chr5.4:62637983-62638002 | MS.gene50180:intron | 30.0% | |
| ATCTGTATTATCATGAAAGC+AGG | + | chr5.4:62637546-62637565 | MS.gene50180:intron | 30.0% | |
| ATTCAGAATGGAATGTGTTT+AGG | - | chr5.4:62637899-62637918 | None:intergenic | 30.0% | |
| ATTGCTAACAATTCTTGTGT+TGG | + | chr5.4:62634671-62634690 | MS.gene50180:intron | 30.0% | |
| CAATTTATTCATGTCTCTTC+AGG | + | chr5.4:62637080-62637099 | MS.gene50180:intron | 30.0% | |
| CTAAATAGGTTTAAGCTCTT+TGG | - | chr5.4:62638839-62638858 | None:intergenic | 30.0% | |
| CTAGAAAAAGACACATTTGA+GGG | - | chr5.4:62635576-62635595 | None:intergenic | 30.0% | |
| CTTATTTGTTCATGTCTATC+AGG | + | chr5.4:62634116-62634135 | MS.gene50180:intron | 30.0% | |
| CTTCGTTTAGTGTTCATTAT+TGG | + | chr5.4:62635681-62635700 | MS.gene50180:intron | 30.0% | |
| CTTTCACGTAATCTATAATC+TGG | - | chr5.4:62638143-62638162 | None:intergenic | 30.0% | |
| GATTCTATGTAGCTATTAAC+TGG | + | chr5.4:62638729-62638748 | MS.gene50180:intron | 30.0% | |
| GGTTTGATTAATATGACTGA+TGG | + | chr5.4:62635512-62635531 | MS.gene50180:intron | 30.0% | |
| GTACAAGATATCTTCTCAAT+AGG | + | chr5.4:62637742-62637761 | MS.gene50180:CDS | 30.0% | |
| GTAGAAAAGAAAGAGAATTC+TGG | + | chr5.4:62635810-62635829 | MS.gene50180:intron | 30.0% | |
| GTGATTCTTACTTTACAAGT+TGG | + | chr5.4:62634508-62634527 | MS.gene50180:intron | 30.0% | |
| GTGTTAAAGTGACTATGATA+TGG | + | chr5.4:62634924-62634943 | MS.gene50180:intron | 30.0% | |
| GTTATGGTTGGAGAAAAAAA+GGG | + | chr5.4:62634184-62634203 | MS.gene50180:intron | 30.0% | |
| GTTGATATGAATAAGCTTTC+AGG | - | chr5.4:62637971-62637990 | None:intergenic | 30.0% | |
| TAACATTGTGAATTCTTGGT+TGG | + | chr5.4:62634410-62634429 | MS.gene50180:intron | 30.0% | |
| TAAGCCTCAATAAAAGGTTA+AGG | - | chr5.4:62638500-62638519 | None:intergenic | 30.0% | |
| TAATAAGAATGATGAGTGGT+TGG | + | chr5.4:62634881-62634900 | MS.gene50180:intron | 30.0% | |
| TATCAATGCTGATAAACATG+AGG | + | chr5.4:62634063-62634082 | MS.gene50180:CDS | 30.0% | |
| TGTAACAGAATTCTGACTTT+GGG | + | chr5.4:62635956-62635975 | MS.gene50180:intron | 30.0% | |
| TGTTGAAATTTCTATCAGTC+AGG | + | chr5.4:62637258-62637277 | MS.gene50180:intron | 30.0% | |
| TTCAATTTGGTAGAAATTGG+TGG | + | chr5.4:62639106-62639125 | MS.gene50180:CDS | 30.0% | |
| TTCAGAATGGAATGTGTTTA+GGG | - | chr5.4:62637898-62637917 | None:intergenic | 30.0% | |
| TTCTTTCTTGCTAATTGTAC+TGG | + | chr5.4:62634040-62634059 | MS.gene50180:CDS | 30.0% | |
| TTGCTAACAATTCTTGTGTT+GGG | + | chr5.4:62634672-62634691 | MS.gene50180:intron | 30.0% | |
| TTGTAACAGAATTCTGACTT+TGG | + | chr5.4:62635955-62635974 | MS.gene50180:intron | 30.0% | |
| TTTCTGCTAAGAAAGAAGAT+GGG | + | chr5.4:62636030-62636049 | MS.gene50180:intron | 30.0% | |
| ! | AAGGTAACTTATTTGGGATT+TGG | + | chr5.4:62635205-62635224 | MS.gene50180:intron | 30.0% |
| ! | ACCTTTTATTGAGGCTTATT+TGG | + | chr5.4:62638502-62638521 | MS.gene50180:intron | 30.0% |
| ! | AGTCTCACAAGTTTTTATAC+CGG | - | chr5.4:62638033-62638052 | None:intergenic | 30.0% |
| ! | CATTCCTTAACCTTTTATTG+AGG | + | chr5.4:62638493-62638512 | MS.gene50180:intron | 30.0% |
| ! | GCCAATTGTAAATTTTGCAA+CGG | - | chr5.4:62637492-62637511 | None:intergenic | 30.0% |
| ! | TTCACCTACTTTGTTTAACA+AGG | - | chr5.4:62638336-62638355 | None:intergenic | 30.0% |
| ! | TTTACTAACTTTTCTCCTAC+AGG | + | chr5.4:62638619-62638638 | MS.gene50180:intron | 30.0% |
| ! | TTTTCTGCTAAGAAAGAAGA+TGG | + | chr5.4:62636029-62636048 | MS.gene50180:intron | 30.0% |
| !! | AAAGGGTGTTATACTAGTAT+TGG | + | chr5.4:62636334-62636353 | MS.gene50180:intron | 30.0% |
| !! | CAAATGTGTCTTTTTCTAGT+CGG | + | chr5.4:62635577-62635596 | MS.gene50180:intron | 30.0% |
| !! | TAGAATGTTCTGAAACTAAG+TGG | + | chr5.4:62635148-62635167 | MS.gene50180:intron | 30.0% |
| !! | TATCCATGTTACTTTGATTG+AGG | + | chr5.4:62636851-62636870 | MS.gene50180:CDS | 30.0% |
| !! | TGAAGAAGTAACTTTTTGAG+AGG | - | chr5.4:62633664-62633683 | None:intergenic | 30.0% |
| !!! | TACTTTACAAGTTGGTTTTG+AGG | + | chr5.4:62634516-62634535 | MS.gene50180:intron | 30.0% |
| !!! | TTACTGTGACAGACATTTTT+TGG | - | chr5.4:62637049-62637068 | None:intergenic | 30.0% |
| AAAAGATAGCTTGAAGAGGA+TGG | + | chr5.4:62639149-62639168 | MS.gene50180:CDS | 35.0% | |
| AAATTACCTTGTTCTGTCTG+AGG | - | chr5.4:62638469-62638488 | None:intergenic | 35.0% | |
| AACGAAGAAGTCACAATGTT+AGG | - | chr5.4:62635668-62635687 | None:intergenic | 35.0% | |
| AACTCCATGAATTCCAAAAG+TGG | - | chr5.4:62636521-62636540 | None:intergenic | 35.0% | |
| AATATCCTAACTAAACTGCC+AGG | - | chr5.4:62636112-62636131 | None:intergenic | 35.0% | |
| AATCAGATTTGAGAGAGTCT+TGG | + | chr5.4:62635834-62635853 | MS.gene50180:intron | 35.0% | |
| ACACAAAAGATAGCTTGAAG+AGG | + | chr5.4:62639145-62639164 | MS.gene50180:CDS | 35.0% | |
| ACCCAAATGACTATTTACTC+GGG | - | chr5.4:62635495-62635514 | None:intergenic | 35.0% | |
| ACCCTAACTAATGAGATACT+TGG | + | chr5.4:62635299-62635318 | MS.gene50180:intron | 35.0% | |
| AGACTGTTTAGAAGAGCTTA+TGG | + | chr5.4:62638048-62638067 | MS.gene50180:intron | 35.0% | |
| AGAGCACAGTGGTATATTTA+TGG | + | chr5.4:62635879-62635898 | MS.gene50180:intron | 35.0% | |
| AGTATGTGTCTTTCGTTTGT+CGG | + | chr5.4:62634363-62634382 | MS.gene50180:intron | 35.0% | |
| ATGAATAAGCTTTCAGGCAA+AGG | - | chr5.4:62637965-62637984 | None:intergenic | 35.0% | |
| ATGCAGATTCATGAAAGGAT+TGG | + | chr5.4:62633859-62633878 | MS.gene50180:CDS | 35.0% | |
| ATTGAACCTAAGACTTTGAG+AGG | - | chr5.4:62634644-62634663 | None:intergenic | 35.0% | |
| ATTGTGAATTCTTGGTTGGA+GGG | + | chr5.4:62634414-62634433 | MS.gene50180:intron | 35.0% | |
| CAAGAATTGTTAGCAATTGG+AGG | - | chr5.4:62634668-62634687 | None:intergenic | 35.0% | |
| CAGCATGAAAGATATAGACT+TGG | + | chr5.4:62638376-62638395 | MS.gene50180:CDS | 35.0% | |
| CTGAGATGCATAGAAAGTAA+AGG | + | chr5.4:62635782-62635801 | MS.gene50180:intron | 35.0% | |
| GAAAAAAGAACCAGGTTCTT+TGG | - | chr5.4:62634023-62634042 | None:intergenic | 35.0% | |
| GAAACATATGCCAAAGTCAA+AGG | - | chr5.4:62634976-62634995 | None:intergenic | 35.0% | |
| GATATATTCAGGGACTATAG+TGG | - | chr5.4:62635540-62635559 | None:intergenic | 35.0% | |
| GCAAGAAAGAAAAAAGAACC+AGG | - | chr5.4:62634031-62634050 | None:intergenic | 35.0% | |
| GCATGAAAGATATAGACTTG+GGG | + | chr5.4:62638378-62638397 | MS.gene50180:CDS | 35.0% | |
| GTTCAAGTGGCAATACATTA+AGG | - | chr5.4:62638275-62638294 | None:intergenic | 35.0% | |
| GTTTATTTCCATAATCCTCC+AGG | + | chr5.4:62638104-62638123 | MS.gene50180:intron | 35.0% | |
| TAGGAGATTGTAAACTTCCA+AGG | - | chr5.4:62636463-62636482 | None:intergenic | 35.0% | |
| TATACTTAACGATGGTACTG+AGG | + | chr5.4:62637329-62637348 | MS.gene50180:CDS | 35.0% | |
| TGAATTGCTGACAATGACAA+CGG | - | chr5.4:62636942-62636961 | None:intergenic | 35.0% | |
| TGAGTGACTATTGTTCCAAA+AGG | - | chr5.4:62635362-62635381 | None:intergenic | 35.0% | |
| TGGAACAATAGTCACTCAAT+GGG | + | chr5.4:62635364-62635383 | MS.gene50180:intron | 35.0% | |
| TGTCAAAACTCTAAGCAACA+TGG | - | chr5.4:62635722-62635741 | None:intergenic | 35.0% | |
| TTAGACAGCAACGAACAAAA+GGG | + | chr5.4:62636317-62636336 | MS.gene50180:intron | 35.0% | |
| TTCTGCTAAGAAAGAAGATG+GGG | + | chr5.4:62636031-62636050 | MS.gene50180:intron | 35.0% | |
| TTGAATTCCTGACAATGTGT+AGG | + | chr5.4:62637837-62637856 | MS.gene50180:intron | 35.0% | |
| TTGGAACAATAGTCACTCAA+TGG | + | chr5.4:62635363-62635382 | MS.gene50180:intron | 35.0% | |
| TTTAGACAGCAACGAACAAA+AGG | + | chr5.4:62636316-62636335 | MS.gene50180:intron | 35.0% | |
| ! | AACCAGAACAAAGCTTTGTA+TGG | - | chr5.4:62634703-62634722 | None:intergenic | 35.0% |
| ! | ACTTTCAAAGCAGTTCCTTT+TGG | + | chr5.4:62635344-62635363 | MS.gene50180:intron | 35.0% |
| ! | AGAATTCTGACTTTGGGAAA+AGG | + | chr5.4:62635962-62635981 | MS.gene50180:intron | 35.0% |
| ! | AGTGTTTTCGTTTGTCAGTT+TGG | + | chr5.4:62635625-62635644 | MS.gene50180:intron | 35.0% |
| ! | ATTGGCAGCTGATTTCTATA+TGG | + | chr5.4:62637506-62637525 | MS.gene50180:intron | 35.0% |
| ! | ATTGGCTTCTATGAACTCTA+AGG | - | chr5.4:62636991-62637010 | None:intergenic | 35.0% |
| ! | CAATTTTGTTAGTCACGGTT+AGG | - | chr5.4:62635938-62635957 | None:intergenic | 35.0% |
| ! | GAATTCTGACTTTGGGAAAA+GGG | + | chr5.4:62635963-62635982 | MS.gene50180:intron | 35.0% |
| ! | GTTCATAGAAGCCAATTTTG+TGG | + | chr5.4:62636995-62637014 | MS.gene50180:intron | 35.0% |
| ! | TTTGTCTCAAACTTTAGGAG+TGG | + | chr5.4:62634819-62634838 | MS.gene50180:intron | 35.0% |
| ! | TTTTGTTCGTTGCTGTCTAA+AGG | - | chr5.4:62636317-62636336 | None:intergenic | 35.0% |
| !! | AGTGGATTTGTTGAAAGTAC+CGG | + | chr5.4:62637772-62637791 | MS.gene50180:CDS | 35.0% |
| !! | TCGATTTTCCTTACTTTTCC+TGG | + | chr5.4:62636091-62636110 | MS.gene50180:intron | 35.0% |
| !!! | AGTCTGACACATTGTTTTGA+AGG | + | chr5.4:62636396-62636415 | MS.gene50180:intron | 35.0% |
| !!! | GTTTTCTCAGTTGGTTTGTT+TGG | + | chr5.4:62638666-62638685 | MS.gene50180:intron | 35.0% |
| !!! | TGGGCTACAACTTTTGTTTT+TGG | + | chr5.4:62638749-62638768 | MS.gene50180:intron | 35.0% |
| AAACCAAGTCGTAGGCTATT+AGG | - | chr5.4:62636010-62636029 | None:intergenic | 40.0% | |
| AAATGACTATTTACTCGGGC+CGG | - | chr5.4:62635491-62635510 | None:intergenic | 40.0% | |
| AACAAAGTAGGTGAAGCCAA+TGG | + | chr5.4:62638341-62638360 | MS.gene50180:CDS | 40.0% | |
| AACCAAACCTACACATTGTC+AGG | - | chr5.4:62637847-62637866 | None:intergenic | 40.0% | |
| AAGTTCTCTCTTCACAGGAT+TGG | + | chr5.4:62637691-62637710 | MS.gene50180:intron | 40.0% | |
| AATCCCACCGTTAACTAACA+GGG | - | chr5.4:62634737-62634756 | None:intergenic | 40.0% | |
| ACTCAATGGGATAGTTGACA+TGG | + | chr5.4:62635377-62635396 | MS.gene50180:intron | 40.0% | |
| ACTCACAGTGCAGCTTAATT+TGG | + | chr5.4:62636370-62636389 | MS.gene50180:intron | 40.0% | |
| AGAGAAGAGTGAGAGATGAA+GGG | - | chr5.4:62633724-62633743 | None:intergenic | 40.0% | |
| AGATCCAGTGAGTGGATAAA+AGG | - | chr5.4:62637399-62637418 | None:intergenic | 40.0% | |
| AGCAGAAAAAACCAAGTCGT+AGG | - | chr5.4:62636018-62636037 | None:intergenic | 40.0% | |
| AGTGAGTGGATAAAAGGTGA+TGG | - | chr5.4:62637393-62637412 | None:intergenic | 40.0% | |
| ATATGTAAACCCCCAAGCAT+TGG | + | chr5.4:62634598-62634617 | MS.gene50180:intron | 40.0% | |
| ATTCCTAATAGCCTACGACT+TGG | + | chr5.4:62636004-62636023 | MS.gene50180:intron | 40.0% | |
| CAATACATTAAGGCCCTGTT+TGG | - | chr5.4:62638265-62638284 | None:intergenic | 40.0% | |
| CAATGTGAGACTGTAACTGA+AGG | + | chr5.4:62636421-62636440 | MS.gene50180:CDS | 40.0% | |
| CAGGAAAATTATCGCAAACC+TGG | - | chr5.4:62636631-62636650 | None:intergenic | 40.0% | |
| CATTGTGAATTCTTGGTTGG+AGG | + | chr5.4:62634413-62634432 | MS.gene50180:intron | 40.0% | |
| CCATGAATTCCAAAAGTGGT+GGG | - | chr5.4:62636517-62636536 | None:intergenic | 40.0% | |
| CCTCTGCAAACTATGTATTG+AGG | + | chr5.4:62635020-62635039 | MS.gene50180:intron | 40.0% | |
| CGTCAGACATCATCAAATTG+AGG | - | chr5.4:62636606-62636625 | None:intergenic | 40.0% | |
| CTAAACTGCCAGGAAAAGTA+AGG | - | chr5.4:62636102-62636121 | None:intergenic | 40.0% | |
| CTCAATGGGATAGTTGACAT+GGG | + | chr5.4:62635378-62635397 | MS.gene50180:intron | 40.0% | |
| CTCACAGTGCAGCTTAATTT+GGG | + | chr5.4:62636371-62636390 | MS.gene50180:intron | 40.0% | |
| GAGAAGATATCTTGTACCGA+AGG | - | chr5.4:62637739-62637758 | None:intergenic | 40.0% | |
| GCATCGCAGCTCATTATTAA+AGG | + | chr5.4:62638913-62638932 | MS.gene50180:intron | 40.0% | |
| GCCCGAGTAAATAGTCATTT+GGG | + | chr5.4:62635491-62635510 | MS.gene50180:intron | 40.0% | |
| GTACAAAGTTCTCTCTTCAC+AGG | + | chr5.4:62637686-62637705 | MS.gene50180:intron | 40.0% | |
| GTGAAAACCATGTGATTACG+CGG | - | chr5.4:62633917-62633936 | None:intergenic | 40.0% | |
| TAAAGCTCACCTTTGTCAAC+TGG | - | chr5.4:62637158-62637177 | None:intergenic | 40.0% | |
| TAAGCTATCCTGGAGGATTA+TGG | - | chr5.4:62638115-62638134 | None:intergenic | 40.0% | |
| TAATCCCACCGTTAACTAAC+AGG | - | chr5.4:62634738-62634757 | None:intergenic | 40.0% | |
| TATCTTTCATGCTGTCTGCA+CGG | - | chr5.4:62638370-62638389 | None:intergenic | 40.0% | |
| TCAGAGATATGCTCATGTGA+AGG | + | chr5.4:62636824-62636843 | MS.gene50180:CDS | 40.0% | |
| TCATGAAAGCAGGATCACAT+TGG | + | chr5.4:62637556-62637575 | MS.gene50180:intron | 40.0% | |
| TCCATGAATTCCAAAAGTGG+TGG | - | chr5.4:62636518-62636537 | None:intergenic | 40.0% | |
| TCCTTTCATGAATCTGCATC+CGG | - | chr5.4:62633858-62633877 | None:intergenic | 40.0% | |
| TCGTGAAGTTTATCATGCAC+AGG | + | chr5.4:62636561-62636580 | MS.gene50180:CDS | 40.0% | |
| TGCTCTTATGCAACTCAGAA+TGG | - | chr5.4:62635865-62635884 | None:intergenic | 40.0% | |
| TGGAGAAAAGCTTAAACTGC+AGG | + | chr5.4:62634444-62634463 | MS.gene50180:intron | 40.0% | |
| TTCCAGTTAGCTGAACAACA+AGG | + | chr5.4:62638949-62638968 | MS.gene50180:CDS | 40.0% | |
| TTCCTGACAATGTGTAGGTT+TGG | + | chr5.4:62637842-62637861 | MS.gene50180:intron | 40.0% | |
| TTTCGGAAGAGGAGAAGAAA+AGG | + | chr5.4:62636715-62636734 | MS.gene50180:CDS | 40.0% | |
| TTTCTCCTACAGGATGCAAA+AGG | + | chr5.4:62638629-62638648 | MS.gene50180:intron | 40.0% | |
| ! | AATTTTGCAACGGTTGTCCA+TGG | - | chr5.4:62637482-62637501 | None:intergenic | 40.0% |
| ! | ACAATCCTTTTGCATCCTGT+AGG | - | chr5.4:62638637-62638656 | None:intergenic | 40.0% |
| ! | AGAAATTGGTGGCACTTGAA+AGG | + | chr5.4:62639117-62639136 | MS.gene50180:CDS | 40.0% |
| ! | ATCACCTTTTATCCACTCAC+TGG | + | chr5.4:62637392-62637411 | MS.gene50180:CDS | 40.0% |
| ! | ATGGTACTGAGGTTCCATAT+GGG | + | chr5.4:62637340-62637359 | MS.gene50180:CDS | 40.0% |
| ! | CAGTTTGTTTACAAGCACCT+TGG | + | chr5.4:62638404-62638423 | MS.gene50180:CDS | 40.0% |
| ! | CATGGTTTTCACACCTCTTT+TGG | + | chr5.4:62633925-62633944 | MS.gene50180:CDS | 40.0% |
| ! | CCTCAATACATAGTTTGCAG+AGG | - | chr5.4:62635023-62635042 | None:intergenic | 40.0% |
| ! | CTTTTCCTGGCAGTTTAGTT+AGG | + | chr5.4:62636104-62636123 | MS.gene50180:intron | 40.0% |
| ! | TCTGGTTTCATAAGCTATCC+TGG | - | chr5.4:62638125-62638144 | None:intergenic | 40.0% |
| ! | TGAGTTACGACCTTTGACTT+TGG | + | chr5.4:62634963-62634982 | MS.gene50180:intron | 40.0% |
| ! | TGATTTGGATGCAGGGATTT+CGG | + | chr5.4:62636698-62636717 | MS.gene50180:intron | 40.0% |
| ! | TGTGCTGCAAAATGCGTTTT+TGG | + | chr5.4:62635086-62635105 | MS.gene50180:intron | 40.0% |
| ! | TTCCATATGGGTTGTTGGTT+TGG | + | chr5.4:62637352-62637371 | MS.gene50180:CDS | 40.0% |
| !! | ACAGGATTGGTATTGATGAG+TGG | + | chr5.4:62637704-62637723 | MS.gene50180:intron | 40.0% |
| !! | CTGTAACTGATTTGGATGCA+GGG | + | chr5.4:62636691-62636710 | MS.gene50180:intron | 40.0% |
| !! | GACCATACAAAGCTTTGTTC+TGG | + | chr5.4:62634698-62634717 | MS.gene50180:intron | 40.0% |
| !! | GCAGCCTTGTTAAACAAAGT+AGG | + | chr5.4:62638329-62638348 | MS.gene50180:CDS | 40.0% |
| !! | TCTGTAACTGATTTGGATGC+AGG | + | chr5.4:62636690-62636709 | MS.gene50180:intron | 40.0% |
| AAAGTAGGTGAAGCCAATGG+AGG | + | chr5.4:62638344-62638363 | MS.gene50180:CDS | 45.0% | |
| AAAGTTACTTGGGCAAGAGC+TGG | - | chr5.4:62637811-62637830 | None:intergenic | 45.0% | |
| AACCTTCCACCAGGAGATTT+AGG | - | chr5.4:62637423-62637442 | None:intergenic | 45.0% | |
| AACTGAAGGAACACAGACAC+TGG | + | chr5.4:62636435-62636454 | MS.gene50180:CDS | 45.0% | |
| AAGAGTGAGAGATGAAGGGT+TGG | - | chr5.4:62633720-62633739 | None:intergenic | 45.0% | |
| ACACAAGTGGAAGCCAAAAG+AGG | - | chr5.4:62633941-62633960 | None:intergenic | 45.0% | |
| ACATCACCAGACCAATGCTT+GGG | - | chr5.4:62634612-62634631 | None:intergenic | 45.0% | |
| ACCTTCCACCAGGAGATTTA+GGG | - | chr5.4:62637422-62637441 | None:intergenic | 45.0% | |
| AGTAGACCTCAGACAGAACA+AGG | + | chr5.4:62638460-62638479 | MS.gene50180:CDS | 45.0% | |
| ATCCCACCGTTAACTAACAG+GGG | - | chr5.4:62634736-62634755 | None:intergenic | 45.0% | |
| ATCGCTCCTCTCAAAGTCTT+AGG | + | chr5.4:62634635-62634654 | MS.gene50180:intron | 45.0% | |
| ATTTAGGGAGATCCAGTGAG+TGG | - | chr5.4:62637407-62637426 | None:intergenic | 45.0% | |
| CATTGTATCCCAGGAGAAAG+GGG | + | chr5.4:62638533-62638552 | MS.gene50180:intron | 45.0% | |
| CCACTAAATTCAACTCCCGT+AGG | - | chr5.4:62636771-62636790 | None:intergenic | 45.0% | |
| CCTACGGGAGTTGAATTTAG+TGG | + | chr5.4:62636768-62636787 | MS.gene50180:CDS | 45.0% | |
| CTCAAGAGTTCCAACACAAG+TGG | - | chr5.4:62633954-62633973 | None:intergenic | 45.0% | |
| CTGTTACACTGTGTGGTTGT+CGG | + | chr5.4:62636738-62636757 | MS.gene50180:CDS | 45.0% | |
| GAAAAGGCTGTTACACTGTG+TGG | + | chr5.4:62636731-62636750 | MS.gene50180:CDS | 45.0% | |
| GACCAAACCAACAACCCATA+TGG | - | chr5.4:62637357-62637376 | None:intergenic | 45.0% | |
| GAGAGAAGAGTGAGAGATGA+AGG | - | chr5.4:62633725-62633744 | None:intergenic | 45.0% | |
| GAGTAAACAAACCTTCCACC+AGG | - | chr5.4:62637432-62637451 | None:intergenic | 45.0% | |
| GCAAAAGGATTGTCTCTAGC+AGG | + | chr5.4:62638644-62638663 | MS.gene50180:intron | 45.0% | |
| GCAACAACAAAAGGACCTCT+AGG | - | chr5.4:62638575-62638594 | None:intergenic | 45.0% | |
| GCACAACAGTACTACAGCTA+TGG | - | chr5.4:62636171-62636190 | None:intergenic | 45.0% | |
| GCATTGTATCCCAGGAGAAA+GGG | + | chr5.4:62638532-62638551 | MS.gene50180:intron | 45.0% | |
| GGCAACAGTTGGAAGTTACA+AGG | + | chr5.4:62638433-62638452 | MS.gene50180:CDS | 45.0% | |
| GGCCCGAGTAAATAGTCATT+TGG | + | chr5.4:62635490-62635509 | MS.gene50180:intron | 45.0% | |
| GGTTTCATAAGCTATCCTGG+AGG | - | chr5.4:62638122-62638141 | None:intergenic | 45.0% | |
| GTGAAACATCGTAACTCTCC+TGG | + | chr5.4:62636253-62636272 | MS.gene50180:intron | 45.0% | |
| GTTATGCAACAAGCCAAACC+AGG | + | chr5.4:62636053-62636072 | MS.gene50180:intron | 45.0% | |
| TACATCACCAGACCAATGCT+TGG | - | chr5.4:62634613-62634632 | None:intergenic | 45.0% | |
| TCGTTGCTGTCTAAAGGAGT+AGG | - | chr5.4:62636311-62636330 | None:intergenic | 45.0% | |
| TGTATCACCGCGTAATCACA+TGG | + | chr5.4:62633907-62633926 | MS.gene50180:CDS | 45.0% | |
| TGTTCCTCCAGCTAATGACA+CGG | - | chr5.4:62638709-62638728 | None:intergenic | 45.0% | |
| TTACAAGCACCTTGGAAGCA+TGG | + | chr5.4:62638412-62638431 | MS.gene50180:CDS | 45.0% | |
| TTCTCAATAGGTGACTGCAG+TGG | + | chr5.4:62637754-62637773 | MS.gene50180:CDS | 45.0% | |
| TTGACCCCCCTGTTAGTTAA+CGG | + | chr5.4:62634727-62634746 | MS.gene50180:intron | 45.0% | |
| ! | ATCTAACCCGTGTCATTAGC+TGG | + | chr5.4:62638699-62638718 | MS.gene50180:intron | 45.0% |
| ! | CCAGGTTCTTTGGAAATAGC+AGG | - | chr5.4:62634013-62634032 | None:intergenic | 45.0% |
| ! | CTCTAGCAGGTTTTCTCAGT+TGG | + | chr5.4:62638657-62638676 | MS.gene50180:intron | 45.0% |
| ! | GATGGTACTGAGGTTCCATA+TGG | + | chr5.4:62637339-62637358 | MS.gene50180:CDS | 45.0% |
| ! | GGGTTTGAGAAGTTGTTTCG+TGG | - | chr5.4:62633687-62633706 | None:intergenic | 45.0% |
| ! | GTGTCTTTCGTTTGTCGGTT+TGG | + | chr5.4:62634368-62634387 | MS.gene50180:intron | 45.0% |
| ! | GTTTTCACGCATTGTATCCC+AGG | + | chr5.4:62638524-62638543 | MS.gene50180:intron | 45.0% |
| ! | TATTGCCACTTGAACTCCAC+AGG | + | chr5.4:62638280-62638299 | MS.gene50180:intron | 45.0% |
| ! | TGAGGTTCCATATGGGTTGT+TGG | + | chr5.4:62637347-62637366 | MS.gene50180:CDS | 45.0% |
| ! | TGAGTTGCATAAGAGCACAG+TGG | + | chr5.4:62635868-62635887 | MS.gene50180:intron | 45.0% |
| !! | AAGCATTGGTCTGGTGATGT+AGG | + | chr5.4:62634612-62634631 | MS.gene50180:intron | 45.0% |
| !! | CCTGCTATTTCCAAAGAACC+TGG | + | chr5.4:62634010-62634029 | MS.gene50180:CDS | 45.0% |
| !! | CTCCTTGTTGTTCAGCTAAC+TGG | - | chr5.4:62638954-62638973 | None:intergenic | 45.0% |
| !! | TTGATGATGTCTGACGTTCC+AGG | + | chr5.4:62636610-62636629 | MS.gene50180:CDS | 45.0% |
| !! | TTGGTTTGGTCTACTGGTGT+TGG | + | chr5.4:62637366-62637385 | MS.gene50180:CDS | 45.0% |
| !!! | AGCTGGAAGTGTTGGTTTTC+CGG | - | chr5.4:62637794-62637813 | None:intergenic | 45.0% |
| !!! | CCCACCACTTTTGGAATTCA+TGG | + | chr5.4:62636514-62636533 | MS.gene50180:CDS | 45.0% |
| !!! | CTTTTGGCTTCCACTTGTGT+TGG | + | chr5.4:62633941-62633960 | MS.gene50180:CDS | 45.0% |
| !! | GATAAAAAAATATATATATT+TGG | - | chr5.4:62637583-62637602 | None:intergenic | 5.0% |
| AGTGAGAGATGAAGGGTTGG+TGG | - | chr5.4:62633717-62633736 | None:intergenic | 50.0% | |
| ATCACCAGACCAATGCTTGG+GGG | - | chr5.4:62634610-62634629 | None:intergenic | 50.0% | |
| ATGCAACAAGCCAAACCAGG+AGG | + | chr5.4:62636056-62636075 | MS.gene50180:intron | 50.0% | |
| CAACTGTTGCCATGCTTCCA+AGG | - | chr5.4:62638424-62638443 | None:intergenic | 50.0% | |
| CACCTTTGTCAACTGGTTGG+TGG | - | chr5.4:62637151-62637170 | None:intergenic | 50.0% | |
| CATCACCAGACCAATGCTTG+GGG | - | chr5.4:62634611-62634630 | None:intergenic | 50.0% | |
| CGAAAGTTCAACACTCCTCC+TGG | - | chr5.4:62636074-62636093 | None:intergenic | 50.0% | |
| CGCATTGTATCCCAGGAGAA+AGG | + | chr5.4:62638531-62638550 | MS.gene50180:intron | 50.0% | |
| CTGGATCTCCCTAAATCTCC+TGG | + | chr5.4:62637411-62637430 | MS.gene50180:CDS | 50.0% | |
| CTGTTGCTGAACCTGTTGCA+AGG | + | chr5.4:62633981-62634000 | MS.gene50180:CDS | 50.0% | |
| CTTCCAACAGTTCCTGACAC+TGG | + | chr5.4:62635426-62635445 | MS.gene50180:intron | 50.0% | |
| CTTCCAGTGTCAGGAACTGT+TGG | - | chr5.4:62635432-62635451 | None:intergenic | 50.0% | |
| CTTGGTTGGAGGGTCATTGT+TGG | + | chr5.4:62634424-62634443 | MS.gene50180:intron | 50.0% | |
| GAACACAGACACTGGATCCT+TGG | + | chr5.4:62636443-62636462 | MS.gene50180:CDS | 50.0% | |
| GATCTCCCTAAATCTCCTGG+TGG | + | chr5.4:62637414-62637433 | MS.gene50180:CDS | 50.0% | |
| GCCGGATGCAGATTCATGAA+AGG | + | chr5.4:62633854-62633873 | MS.gene50180:CDS | 50.0% | |
| GCTCACCTTTGTCAACTGGT+TGG | - | chr5.4:62637154-62637173 | None:intergenic | 50.0% | |
| GTTCAACACTCCTCCTGGTT+TGG | - | chr5.4:62636069-62636088 | None:intergenic | 50.0% | |
| GTTCCTCCAGCTAATGACAC+GGG | - | chr5.4:62638708-62638727 | None:intergenic | 50.0% | |
| TCCCACCGTTAACTAACAGG+GGG | - | chr5.4:62634735-62634754 | None:intergenic | 50.0% | |
| TCCCTAAATCTCCTGGTGGA+AGG | + | chr5.4:62637418-62637437 | MS.gene50180:CDS | 50.0% | |
| TGAGTGGCTTCGTGTTCCTT+CGG | + | chr5.4:62637720-62637739 | MS.gene50180:CDS | 50.0% | |
| TGCCACCAACCAGTTGACAA+AGG | + | chr5.4:62637146-62637165 | MS.gene50180:CDS | 50.0% | |
| TGCTACCTGTGGAGTTCAAG+TGG | - | chr5.4:62638288-62638307 | None:intergenic | 50.0% | |
| TTACACTGTGTGGTTGTCGG+AGG | + | chr5.4:62636741-62636760 | MS.gene50180:CDS | 50.0% | |
| ! | CTTCCTTTGATGACCGACTC+AGG | + | chr5.4:62637118-62637137 | MS.gene50180:CDS | 50.0% |
| ! | CTTGGAAGCATGGCAACAGT+TGG | + | chr5.4:62638422-62638441 | MS.gene50180:CDS | 50.0% |
| ! | GCAGGTTGAATCCTTGCAAC+AGG | - | chr5.4:62633995-62634014 | None:intergenic | 50.0% |
| ! | TAACCCGTGTCATTAGCTGG+AGG | + | chr5.4:62638702-62638721 | MS.gene50180:intron | 50.0% |
| !! | AGATGAAGGGTTGGTGGTGT+TGG | - | chr5.4:62633711-62633730 | None:intergenic | 50.0% |
| !! | ATGAAGGGTTGGTGGTGTTG+GGG | - | chr5.4:62633709-62633728 | None:intergenic | 50.0% |
| !! | CAGTTGGTTTGTTTGGCGCT+CGG | + | chr5.4:62638673-62638692 | MS.gene50180:intron | 50.0% |
| !! | GATGAAGGGTTGGTGGTGTT+GGG | - | chr5.4:62633710-62633729 | None:intergenic | 50.0% |
| !! | GGGTTGTTGGTTTGGTCTAC+TGG | + | chr5.4:62637360-62637379 | MS.gene50180:CDS | 50.0% |
| !! | TAAACCCCCAAGCATTGGTC+TGG | + | chr5.4:62634603-62634622 | MS.gene50180:intron | 50.0% |
| !! | TAACGGTGGGATTAGTCCCA+CGG | + | chr5.4:62634744-62634763 | MS.gene50180:intron | 50.0% |
| AAGCCACGAGTGGTGGTTCT+CGG | + | chr5.4:62633821-62633840 | MS.gene50180:CDS | 55.0% | |
| ACCCCCCTGTTAGTTAACGG+TGG | + | chr5.4:62634730-62634749 | MS.gene50180:intron | 55.0% | |
| AGATGTGGCCCCTTTCTCCT+GGG | - | chr5.4:62638544-62638563 | None:intergenic | 55.0% | |
| AGGAGAAAGGGGCCACATCT+GGG | + | chr5.4:62638544-62638563 | MS.gene50180:intron | 55.0% | |
| CCCACCGTTAACTAACAGGG+GGG | - | chr5.4:62634734-62634753 | None:intergenic | 55.0% | |
| CCCCCCTGTTAGTTAACGGT+GGG | + | chr5.4:62634731-62634750 | MS.gene50180:intron | 55.0% | |
| CGCTTCTCCACTTCAACACC+CGG | + | chr5.4:62633746-62633765 | MS.gene50180:CDS | 55.0% | |
| GAACTCCACAGGTAGCAGAG+AGG | + | chr5.4:62638291-62638310 | MS.gene50180:intron | 55.0% | |
| GGATGCAGGGATTTCGGAAG+AGG | + | chr5.4:62636704-62636723 | MS.gene50180:intron | 55.0% | |
| GTGCCTGAGTCGGTCATCAA+AGG | - | chr5.4:62637124-62637143 | None:intergenic | 55.0% | |
| TCGTGGCTTCTCGTGTGGTT+TGG | - | chr5.4:62633810-62633829 | None:intergenic | 55.0% | |
| TGGTGGCATAGTGCCTGAGT+CGG | - | chr5.4:62637134-62637153 | None:intergenic | 55.0% | |
| ! | GGAGCACAACCCACCACTTT+TGG | + | chr5.4:62636505-62636524 | MS.gene50180:CDS | 55.0% |
| ! | TCAGGAGTGCGACTTGTTCG+TGG | + | chr5.4:62637276-62637295 | MS.gene50180:CDS | 55.0% |
| ! | TGGGCAAGAGCTGGAAGTGT+TGG | - | chr5.4:62637802-62637821 | None:intergenic | 55.0% |
| !! | GGCTTCTCGTGTGGTTTGGT+TGG | - | chr5.4:62633806-62633825 | None:intergenic | 55.0% |
| !! | GGTTGAACCGGGTGTTGAAG+TGG | - | chr5.4:62633756-62633775 | None:intergenic | 55.0% |
| !! | TGAAGGGTTGGTGGTGTTGG+GGG | - | chr5.4:62633708-62633727 | None:intergenic | 55.0% |
| AACACCCGGTTCAACCGCTC+CGG | + | chr5.4:62633760-62633779 | MS.gene50180:CDS | 60.0% | |
| ACACGAGAAGCCACGAGTGG+TGG | + | chr5.4:62633814-62633833 | MS.gene50180:CDS | 60.0% | |
| ACCACACGAGAAGCCACGAG+TGG | + | chr5.4:62633811-62633830 | MS.gene50180:CDS | 60.0% | |
| ACCACTCGTGGCTTCTCGTG+TGG | - | chr5.4:62633815-62633834 | None:intergenic | 60.0% | |
| CACATCTGGGCTCGACCTAG+AGG | + | chr5.4:62638557-62638576 | MS.gene50180:intron | 60.0% | |
| CACTGTGTGGTTGTCGGAGG+TGG | + | chr5.4:62636744-62636763 | MS.gene50180:CDS | 60.0% | |
| CAGATGTGGCCCCTTTCTCC+TGG | - | chr5.4:62638545-62638564 | None:intergenic | 60.0% | |
| CAGGAGAAAGGGGCCACATC+TGG | + | chr5.4:62638543-62638562 | MS.gene50180:intron | 60.0% | |
| CCACAGGTAGCAGAGAGGCA+AGG | + | chr5.4:62638296-62638315 | MS.gene50180:intron | 60.0% | |
| CCATTGGGGCTTCCAGTGTC+AGG | - | chr5.4:62635441-62635460 | None:intergenic | 60.0% | |
| CCTGACACTGGAAGCCCCAA+TGG | + | chr5.4:62635438-62635457 | MS.gene50180:intron | 60.0% | |
| CCTTGCCTCTCTGCTACCTG+TGG | - | chr5.4:62638299-62638318 | None:intergenic | 60.0% | |
| CTCTAGGTCGAGCCCAGATG+TGG | - | chr5.4:62638559-62638578 | None:intergenic | 60.0% | |
| GAATCTGCATCCGGCCCAAC+CGG | - | chr5.4:62633849-62633868 | None:intergenic | 60.0% | |
| GGTTGTCGGAGGTGGTCCTA+CGG | + | chr5.4:62636752-62636771 | MS.gene50180:CDS | 60.0% | |
| GTTGTCGGAGGTGGTCCTAC+GGG | + | chr5.4:62636753-62636772 | MS.gene50180:CDS | 60.0% | |
| ! | AACCGCTCCGGTTCGCTATG+CGG | + | chr5.4:62633772-62633791 | MS.gene50180:CDS | 60.0% |
| !! | GAAGGGTTGGTGGTGTTGGG+GGG | - | chr5.4:62633707-62633726 | None:intergenic | 60.0% |
| AGCCGCATAGCGAACCGGAG+CGG | - | chr5.4:62633777-62633796 | None:intergenic | 65.0% | |
| CCGAGAGCCGCATAGCGAAC+CGG | - | chr5.4:62633782-62633801 | None:intergenic | 65.0% | |
| CGAACCGGAGCGGTTGAACC+GGG | - | chr5.4:62633767-62633786 | None:intergenic | 65.0% | |
| CGAGTGGTGGTTCTCGGCAC+CGG | + | chr5.4:62633827-62633846 | MS.gene50180:CDS | 65.0% | |
| GCGAACCGGAGCGGTTGAAC+CGG | - | chr5.4:62633768-62633787 | None:intergenic | 65.0% | |
| GCTGTCTGCACGGCCTCCAT+TGG | - | chr5.4:62638360-62638379 | None:intergenic | 65.0% | |
| GTGCCGAGAACCACCACTCG+TGG | - | chr5.4:62633827-62633846 | None:intergenic | 65.0% | |
| ! | CCGGTTCGCTATGCGGCTCT+CGG | + | chr5.4:62633779-62633798 | MS.gene50180:CDS | 65.0% |
| !! | GGTGGTTCTCGGCACCGGTT+GGG | + | chr5.4:62633832-62633851 | MS.gene50180:CDS | 65.0% |
| !! | TGGTGGTTCTCGGCACCGGT+TGG | + | chr5.4:62633831-62633850 | MS.gene50180:CDS | 65.0% |
| !! | GTTCTCGGCACCGGTTGGGC+CGG | + | chr5.4:62633836-62633855 | MS.gene50180:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 62633644 | 62639203 | 62633644 | ID=MS.gene50180 |
| chr5.4 | mRNA | 62633644 | 62639203 | 62633644 | ID=MS.gene50180.t1;Parent=MS.gene50180 |
| chr5.4 | exon | 62633644 | 62634084 | 62633644 | ID=MS.gene50180.t1.exon1;Parent=MS.gene50180.t1 |
| chr5.4 | CDS | 62633644 | 62634084 | 62633644 | ID=cds.MS.gene50180.t1;Parent=MS.gene50180.t1 |
| chr5.4 | exon | 62636418 | 62636631 | 62636418 | ID=MS.gene50180.t1.exon2;Parent=MS.gene50180.t1 |
| chr5.4 | CDS | 62636418 | 62636631 | 62636418 | ID=cds.MS.gene50180.t1;Parent=MS.gene50180.t1 |
| chr5.4 | exon | 62636712 | 62636872 | 62636712 | ID=MS.gene50180.t1.exon3;Parent=MS.gene50180.t1 |
| chr5.4 | CDS | 62636712 | 62636872 | 62636712 | ID=cds.MS.gene50180.t1;Parent=MS.gene50180.t1 |
| chr5.4 | exon | 62637102 | 62637167 | 62637102 | ID=MS.gene50180.t1.exon4;Parent=MS.gene50180.t1 |
| chr5.4 | CDS | 62637102 | 62637167 | 62637102 | ID=cds.MS.gene50180.t1;Parent=MS.gene50180.t1 |
| chr5.4 | exon | 62637276 | 62637439 | 62637276 | ID=MS.gene50180.t1.exon5;Parent=MS.gene50180.t1 |
| chr5.4 | CDS | 62637276 | 62637439 | 62637276 | ID=cds.MS.gene50180.t1;Parent=MS.gene50180.t1 |
| chr5.4 | exon | 62637708 | 62637822 | 62637708 | ID=MS.gene50180.t1.exon6;Parent=MS.gene50180.t1 |
| chr5.4 | CDS | 62637708 | 62637822 | 62637708 | ID=cds.MS.gene50180.t1;Parent=MS.gene50180.t1 |
| chr5.4 | exon | 62638302 | 62638481 | 62638302 | ID=MS.gene50180.t1.exon7;Parent=MS.gene50180.t1 |
| chr5.4 | CDS | 62638302 | 62638481 | 62638302 | ID=cds.MS.gene50180.t1;Parent=MS.gene50180.t1 |
| chr5.4 | exon | 62638922 | 62639203 | 62638922 | ID=MS.gene50180.t1.exon8;Parent=MS.gene50180.t1 |
| chr5.4 | CDS | 62638922 | 62639203 | 62638922 | ID=cds.MS.gene50180.t1;Parent=MS.gene50180.t1 |
| Gene Sequence |
| Protein sequence |
