Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050824.t1 | XP_003626095.2 | 95.7 | 257 | 10 | 1 | 1 | 257 | 6 | 261 | 1.60E-136 | 495.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050824.t1 | Q41651 | 69.0 | 258 | 69 | 4 | 1 | 257 | 1 | 248 | 2.8e-92 | 339.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050824.t1 | G7KVH0 | 95.7 | 257 | 10 | 1 | 1 | 257 | 6 | 261 | 1.2e-136 | 495.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene050824 | 0.83936 | 1.66E-57 | -1.69E-46 |
| MS.gene04984 | MS.gene050824 | 0.815256 | 1.01E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene050824 | 0.82041 | 6.96E-53 | -1.69E-46 |
| MS.gene050227 | MS.gene050824 | 0.839806 | 1.27E-57 | -1.69E-46 |
| MS.gene050228 | MS.gene050824 | 0.827701 | 1.35E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene050824 | 0.810176 | 1.31E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene050824 | 0.878187 | 3.44E-69 | -1.69E-46 |
| MS.gene050721 | MS.gene050824 | 0.875928 | 2.09E-68 | -1.69E-46 |
| MS.gene050724 | MS.gene050824 | 0.88334 | 4.87E-71 | -1.69E-46 |
| MS.gene050820 | MS.gene050824 | 0.812828 | 3.48E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene052176 | 0.804809 | 1.81E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene052376 | 0.816738 | 4.74E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene054930 | 0.804659 | 1.94E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene056506 | 0.813312 | 2.73E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene057967 | 0.800374 | 1.49E-48 | -1.69E-46 |
| MS.gene050824 | MS.gene058084 | 0.805672 | 1.19E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene060572 | 0.808223 | 3.44E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene063128 | 0.805813 | 1.11E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene06449 | 0.811081 | 8.37E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene065267 | 0.814376 | 1.59E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene066599 | 0.807602 | 4.66E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene06705 | 0.826636 | 2.43E-54 | -1.69E-46 |
| MS.gene050824 | MS.gene067151 | 0.804497 | 2.10E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene068726 | 0.80214 | 6.46E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene068727 | 0.801446 | 8.97E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene06921 | 0.832888 | 7.31E-56 | -1.69E-46 |
| MS.gene050824 | MS.gene06922 | 0.834341 | 3.17E-56 | -1.69E-46 |
| MS.gene050824 | MS.gene069754 | 0.813923 | 2.00E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene07084 | 0.835559 | 1.56E-56 | -1.69E-46 |
| MS.gene050824 | MS.gene07089 | 0.800418 | 1.46E-48 | -1.69E-46 |
| MS.gene050824 | MS.gene071438 | -0.805715 | 1.17E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene071529 | 0.807335 | 5.32E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene072624 | 0.877767 | 4.82E-69 | -1.69E-46 |
| MS.gene050824 | MS.gene072627 | 0.88144 | 2.40E-70 | -1.69E-46 |
| MS.gene050824 | MS.gene072630 | 0.880892 | 3.77E-70 | -1.69E-46 |
| MS.gene050824 | MS.gene072677 | 0.834932 | 2.25E-56 | -1.69E-46 |
| MS.gene050824 | MS.gene072945 | 0.800453 | 1.43E-48 | -1.69E-46 |
| MS.gene050824 | MS.gene072950 | 0.812647 | 3.82E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene074257 | 0.831364 | 1.74E-55 | -1.69E-46 |
| MS.gene050824 | MS.gene07536 | 0.806968 | 6.36E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene08716 | 0.806234 | 9.08E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene09136 | 0.805067 | 1.60E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene20184 | 0.824674 | 7.10E-54 | -1.69E-46 |
| MS.gene050824 | MS.gene21200 | 0.820617 | 6.24E-53 | -1.69E-46 |
| MS.gene050824 | MS.gene21881 | 0.826663 | 2.40E-54 | -1.69E-46 |
| MS.gene050824 | MS.gene21958 | 0.805776 | 1.13E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene25706 | 0.819819 | 9.50E-53 | -1.69E-46 |
| MS.gene050824 | MS.gene25707 | 0.802903 | 4.50E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene26288 | 0.826641 | 2.43E-54 | -1.69E-46 |
| MS.gene050824 | MS.gene28204 | 0.806568 | 7.72E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene28322 | 0.812478 | 4.15E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene28498 | 0.812749 | 3.63E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene28514 | 0.814885 | 1.23E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene28638 | 0.822639 | 2.13E-53 | -1.69E-46 |
| MS.gene050824 | MS.gene29986 | 0.801518 | 8.67E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene30356 | 0.801099 | 1.06E-48 | -1.69E-46 |
| MS.gene050824 | MS.gene30964 | 0.815114 | 1.09E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene31059 | 0.810149 | 1.33E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene31148 | 0.809279 | 2.05E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene32589 | 0.81789 | 2.61E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene34039 | 0.807585 | 4.70E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene34085 | 0.838218 | 3.28E-57 | -1.69E-46 |
| MS.gene050824 | MS.gene34323 | 0.832367 | 9.85E-56 | -1.69E-46 |
| MS.gene050824 | MS.gene36281 | 0.804108 | 2.53E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene36290 | 0.828537 | 8.51E-55 | -1.69E-46 |
| MS.gene050824 | MS.gene36374 | 0.809689 | 1.67E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene37312 | 0.809886 | 1.52E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene37483 | 0.815525 | 8.84E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene40463 | 0.812825 | 3.49E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene43886 | 0.828788 | 7.40E-55 | -1.69E-46 |
| MS.gene050824 | MS.gene44603 | 0.81578 | 7.76E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene44986 | 0.815535 | 8.80E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene45498 | 0.816224 | 6.17E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene48435 | 0.805551 | 1.26E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene49003 | 0.825561 | 4.38E-54 | -1.69E-46 |
| MS.gene050824 | MS.gene49486 | 0.812844 | 3.45E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene50595 | 0.810147 | 1.33E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene51588 | 0.809775 | 1.60E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene51850 | 0.831503 | 1.61E-55 | -1.69E-46 |
| MS.gene050824 | MS.gene52059 | 0.815465 | 9.12E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene53383 | 0.809925 | 1.49E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene54544 | 0.801017 | 1.10E-48 | -1.69E-46 |
| MS.gene050824 | MS.gene56253 | 0.804786 | 1.83E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene57160 | -0.824378 | 8.34E-54 | -1.69E-46 |
| MS.gene050824 | MS.gene57162 | -0.833147 | 6.30E-56 | -1.69E-46 |
| MS.gene050824 | MS.gene59305 | 0.810513 | 1.11E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene59876 | 0.817642 | 2.97E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene60298 | 0.804647 | 1.95E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene60529 | 0.809766 | 1.61E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene61163 | 0.809867 | 1.53E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene63288 | 0.802861 | 4.59E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene63412 | 0.818162 | 2.26E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene63887 | 0.816044 | 6.77E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene64645 | 0.803148 | 4.00E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene68873 | 0.823104 | 1.66E-53 | -1.69E-46 |
| MS.gene050824 | MS.gene69928 | 0.818238 | 2.18E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene70811 | 0.832152 | 1.11E-55 | -1.69E-46 |
| MS.gene050824 | MS.gene70819 | 0.800656 | 1.30E-48 | -1.69E-46 |
| MS.gene050824 | MS.gene71178 | 0.802805 | 4.71E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene71232 | 0.809831 | 1.56E-50 | -1.69E-46 |
| MS.gene050824 | MS.gene73227 | 0.829508 | 4.95E-55 | -1.69E-46 |
| MS.gene050824 | MS.gene73273 | 0.805684 | 1.19E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene73902 | 0.805895 | 1.07E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene74980 | 0.802208 | 6.26E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene76035 | 0.844734 | 6.29E-59 | -1.69E-46 |
| MS.gene050824 | MS.gene76403 | 0.817045 | 4.04E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene76645 | 0.815738 | 7.92E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene77588 | 0.817798 | 2.74E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene78247 | 0.846183 | 2.55E-59 | -1.69E-46 |
| MS.gene050824 | MS.gene78659 | 0.814764 | 1.30E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene79439 | 0.818101 | 2.34E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene81381 | 0.803772 | 2.97E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene84086 | 0.817123 | 3.88E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene84382 | 0.822222 | 2.66E-53 | -1.69E-46 |
| MS.gene050824 | MS.gene84396 | 0.848577 | 5.61E-60 | -1.69E-46 |
| MS.gene050824 | MS.gene85149 | -0.801183 | 1.02E-48 | -1.69E-46 |
| MS.gene050824 | MS.gene87115 | 0.803115 | 4.07E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene87170 | 0.805108 | 1.57E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene87377 | 0.814439 | 1.54E-51 | -1.69E-46 |
| MS.gene050824 | MS.gene91965 | 0.815306 | 9.89E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene92338 | 0.801598 | 8.35E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene92548 | 0.841282 | 5.22E-58 | -1.69E-46 |
| MS.gene050824 | MS.gene93457 | 0.8599 | 3.00E-63 | -1.69E-46 |
| MS.gene050824 | MS.gene97782 | 0.801424 | 9.06E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene99462 | 0.815059 | 1.12E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050824.t1 | MTR_7g110980 | 95.720 | 257 | 10 | 1 | 1 | 257 | 6 | 261 | 0.0 | 506 |
| MS.gene050824.t1 | MTR_1g085560 | 70.930 | 258 | 67 | 6 | 1 | 257 | 1 | 251 | 8.99e-119 | 340 |
| MS.gene050824.t1 | MTR_1g117010 | 66.310 | 187 | 60 | 1 | 72 | 255 | 57 | 243 | 5.47e-89 | 264 |
| MS.gene050824.t1 | MTR_1g117010 | 66.310 | 187 | 60 | 1 | 72 | 255 | 57 | 243 | 5.47e-89 | 264 |
| MS.gene050824.t1 | MTR_3g463900 | 61.413 | 184 | 59 | 3 | 83 | 255 | 21 | 203 | 1.19e-74 | 226 |
| MS.gene050824.t1 | MTR_3g070500 | 63.158 | 171 | 55 | 2 | 90 | 253 | 62 | 231 | 7.57e-72 | 220 |
| MS.gene050824.t1 | MTR_4g075290 | 59.649 | 171 | 61 | 2 | 90 | 253 | 2 | 171 | 4.05e-69 | 211 |
| MS.gene050824.t1 | MTR_3g117750 | 59.064 | 171 | 62 | 2 | 93 | 256 | 13 | 182 | 4.93e-67 | 206 |
| MS.gene050824.t1 | MTR_7g116340 | 60.714 | 168 | 58 | 2 | 93 | 253 | 5 | 171 | 5.01e-67 | 205 |
| MS.gene050824.t1 | MTR_8g040180 | 57.576 | 165 | 64 | 2 | 95 | 253 | 21 | 185 | 9.83e-63 | 195 |
| MS.gene050824.t1 | MTR_4g086760 | 56.140 | 171 | 67 | 1 | 92 | 254 | 4 | 174 | 1.00e-61 | 198 |
| MS.gene050824.t1 | MTR_4g086760 | 56.140 | 171 | 67 | 1 | 92 | 254 | 4 | 174 | 1.32e-61 | 196 |
| MS.gene050824.t1 | MTR_4g086760 | 56.140 | 171 | 67 | 1 | 92 | 254 | 4 | 174 | 1.85e-61 | 196 |
| MS.gene050824.t1 | MTR_8g079690 | 55.030 | 169 | 68 | 1 | 93 | 253 | 5 | 173 | 1.36e-60 | 195 |
| MS.gene050824.t1 | MTR_4g073650 | 49.468 | 188 | 87 | 2 | 74 | 254 | 29 | 215 | 2.14e-60 | 190 |
| MS.gene050824.t1 | MTR_7g095750 | 58.929 | 168 | 60 | 2 | 94 | 253 | 9 | 175 | 2.47e-60 | 201 |
| MS.gene050824.t1 | MTR_3g070500 | 67.717 | 127 | 34 | 1 | 90 | 209 | 62 | 188 | 1.12e-56 | 179 |
| MS.gene050824.t1 | MTR_2g085075 | 54.730 | 148 | 62 | 4 | 104 | 250 | 469 | 612 | 2.48e-44 | 158 |
| MS.gene050824.t1 | MTR_3g070500 | 65.686 | 102 | 28 | 1 | 90 | 184 | 62 | 163 | 6.37e-41 | 139 |
| MS.gene050824.t1 | MTR_3g070500 | 65.347 | 101 | 28 | 1 | 90 | 183 | 62 | 162 | 1.37e-40 | 138 |
| MS.gene050824.t1 | MTR_7g105220 | 50.000 | 146 | 68 | 4 | 104 | 248 | 17 | 158 | 1.30e-39 | 135 |
| MS.gene050824.t1 | MTR_3g107660 | 47.368 | 171 | 81 | 2 | 95 | 257 | 13 | 182 | 3.04e-39 | 145 |
| MS.gene050824.t1 | MTR_1g011980 | 44.262 | 183 | 86 | 4 | 86 | 257 | 1 | 178 | 5.85e-39 | 144 |
| MS.gene050824.t1 | MTR_3g085705 | 61.616 | 99 | 33 | 3 | 138 | 236 | 27 | 120 | 2.76e-37 | 128 |
| MS.gene050824.t1 | MTR_8g036015 | 51.034 | 145 | 66 | 4 | 104 | 247 | 8 | 148 | 2.25e-35 | 124 |
| MS.gene050824.t1 | MTR_5g015500 | 46.528 | 144 | 72 | 4 | 106 | 248 | 314 | 453 | 1.58e-30 | 119 |
| MS.gene050824.t1 | MTR_5g015500 | 46.528 | 144 | 72 | 4 | 106 | 248 | 354 | 493 | 2.76e-30 | 119 |
| MS.gene050824.t1 | MTR_2g023120 | 44.000 | 150 | 73 | 7 | 106 | 250 | 22 | 165 | 4.53e-22 | 95.1 |
| MS.gene050824.t1 | MTR_6g084140 | 41.353 | 133 | 65 | 5 | 104 | 227 | 25 | 153 | 3.15e-19 | 87.0 |
| MS.gene050824.t1 | MTR_6g084140 | 41.353 | 133 | 65 | 5 | 104 | 227 | 8 | 136 | 3.39e-19 | 87.0 |
| MS.gene050824.t1 | MTR_8g442420 | 40.602 | 133 | 66 | 5 | 104 | 227 | 8 | 136 | 5.30e-18 | 83.6 |
| MS.gene050824.t1 | MTR_1g094065 | 35.948 | 153 | 77 | 7 | 104 | 250 | 87 | 224 | 5.71e-17 | 77.8 |
| MS.gene050824.t1 | MTR_2g461260 | 30.667 | 150 | 85 | 5 | 105 | 235 | 91 | 240 | 3.00e-15 | 74.3 |
| MS.gene050824.t1 | MTR_1g035360 | 29.932 | 147 | 95 | 5 | 104 | 250 | 86 | 224 | 6.20e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050824.t1 | AT3G62030 | 60.853 | 258 | 99 | 1 | 1 | 256 | 1 | 258 | 1.06e-109 | 317 |
| MS.gene050824.t1 | AT3G62030 | 60.618 | 259 | 99 | 1 | 1 | 256 | 1 | 259 | 2.34e-109 | 316 |
| MS.gene050824.t1 | AT3G62030 | 70.046 | 217 | 58 | 3 | 45 | 257 | 100 | 313 | 3.29e-106 | 310 |
| MS.gene050824.t1 | AT5G13120 | 62.304 | 191 | 69 | 1 | 68 | 255 | 66 | 256 | 6.70e-88 | 261 |
| MS.gene050824.t1 | AT5G13120 | 62.304 | 191 | 69 | 1 | 68 | 255 | 62 | 252 | 9.29e-88 | 261 |
| MS.gene050824.t1 | AT5G58710 | 61.497 | 187 | 60 | 3 | 76 | 255 | 23 | 204 | 7.92e-76 | 229 |
| MS.gene050824.t1 | AT2G29960 | 60.963 | 187 | 65 | 2 | 76 | 255 | 16 | 201 | 3.03e-75 | 227 |
| MS.gene050824.t1 | AT2G29960 | 60.963 | 187 | 65 | 2 | 76 | 255 | 16 | 201 | 3.03e-75 | 227 |
| MS.gene050824.t1 | AT2G21130 | 61.905 | 168 | 56 | 2 | 93 | 253 | 6 | 172 | 8.36e-71 | 215 |
| MS.gene050824.t1 | AT4G38740 | 60.714 | 168 | 58 | 2 | 93 | 253 | 5 | 171 | 1.81e-69 | 212 |
| MS.gene050824.t1 | AT3G56070 | 61.310 | 168 | 57 | 2 | 93 | 253 | 5 | 171 | 9.39e-69 | 210 |
| MS.gene050824.t1 | AT3G56070 | 61.310 | 168 | 57 | 2 | 93 | 253 | 5 | 171 | 9.39e-69 | 210 |
| MS.gene050824.t1 | AT2G16600 | 59.412 | 170 | 57 | 3 | 93 | 253 | 6 | 172 | 1.03e-68 | 210 |
| MS.gene050824.t1 | AT3G55920 | 53.731 | 201 | 75 | 3 | 72 | 255 | 29 | 228 | 4.86e-68 | 210 |
| MS.gene050824.t1 | AT2G29960 | 56.684 | 187 | 63 | 3 | 76 | 255 | 16 | 191 | 4.14e-66 | 204 |
| MS.gene050824.t1 | AT4G34870 | 55.491 | 173 | 59 | 3 | 93 | 253 | 5 | 171 | 1.05e-61 | 192 |
| MS.gene050824.t1 | AT2G15790 | 56.140 | 171 | 67 | 1 | 92 | 254 | 4 | 174 | 5.10e-61 | 196 |
| MS.gene050824.t1 | AT3G63400 | 56.000 | 175 | 68 | 2 | 86 | 252 | 1 | 174 | 7.25e-61 | 197 |
| MS.gene050824.t1 | AT2G38730 | 55.758 | 165 | 67 | 2 | 95 | 253 | 35 | 199 | 1.69e-59 | 187 |
| MS.gene050824.t1 | AT3G63400 | 56.000 | 175 | 68 | 2 | 86 | 252 | 1 | 174 | 2.05e-59 | 197 |
| MS.gene050824.t1 | AT3G63400 | 56.000 | 175 | 68 | 2 | 86 | 252 | 1 | 174 | 2.05e-59 | 197 |
| MS.gene050824.t1 | AT3G63400 | 56.000 | 175 | 68 | 2 | 86 | 252 | 1 | 174 | 2.05e-59 | 197 |
| MS.gene050824.t1 | AT4G34960 | 52.571 | 175 | 76 | 1 | 89 | 256 | 44 | 218 | 2.49e-59 | 187 |
| MS.gene050824.t1 | AT2G16600 | 54.601 | 163 | 54 | 3 | 93 | 253 | 6 | 150 | 1.07e-57 | 181 |
| MS.gene050824.t1 | AT4G34960 | 57.031 | 128 | 48 | 1 | 89 | 209 | 44 | 171 | 5.63e-47 | 154 |
| MS.gene050824.t1 | AT3G44600 | 55.405 | 148 | 61 | 4 | 104 | 250 | 483 | 626 | 1.27e-43 | 156 |
| MS.gene050824.t1 | AT2G36130 | 49.315 | 146 | 69 | 4 | 104 | 248 | 17 | 158 | 2.00e-39 | 135 |
| MS.gene050824.t1 | AT1G01940 | 49.655 | 145 | 68 | 4 | 104 | 247 | 8 | 148 | 1.27e-35 | 125 |
| MS.gene050824.t1 | AT4G32420 | 43.575 | 179 | 84 | 4 | 86 | 252 | 1 | 174 | 1.37e-34 | 132 |
| MS.gene050824.t1 | AT4G32420 | 43.575 | 179 | 84 | 4 | 86 | 252 | 1 | 174 | 1.37e-34 | 132 |
| MS.gene050824.t1 | AT4G32420 | 43.575 | 179 | 84 | 4 | 86 | 252 | 1 | 174 | 1.37e-34 | 132 |
| MS.gene050824.t1 | AT4G32420 | 43.575 | 179 | 84 | 4 | 86 | 252 | 1 | 174 | 1.37e-34 | 132 |
| MS.gene050824.t1 | AT4G32420 | 45.455 | 154 | 76 | 1 | 86 | 231 | 1 | 154 | 4.76e-34 | 130 |
| MS.gene050824.t1 | AT3G22920 | 42.442 | 172 | 79 | 7 | 93 | 253 | 5 | 167 | 8.21e-33 | 120 |
| MS.gene050824.t1 | AT5G67530 | 44.521 | 146 | 76 | 4 | 106 | 250 | 353 | 494 | 1.74e-30 | 119 |
| MS.gene050824.t1 | AT4G33060 | 44.755 | 143 | 72 | 6 | 106 | 245 | 22 | 160 | 1.04e-25 | 105 |
| MS.gene050824.t1 | AT1G53720 | 37.908 | 153 | 82 | 5 | 104 | 247 | 8 | 156 | 1.04e-19 | 87.4 |
| MS.gene050824.t1 | AT1G53720 | 37.908 | 153 | 82 | 5 | 104 | 247 | 8 | 156 | 2.27e-19 | 87.4 |
| MS.gene050824.t1 | AT2G47320 | 31.081 | 148 | 95 | 4 | 106 | 253 | 87 | 227 | 1.83e-14 | 70.9 |
| MS.gene050824.t1 | AT3G66654 | 29.878 | 164 | 86 | 5 | 95 | 247 | 82 | 227 | 1.41e-12 | 65.9 |
| MS.gene050824.t1 | AT3G66654 | 29.878 | 164 | 86 | 5 | 95 | 247 | 82 | 227 | 1.41e-12 | 65.9 |
| MS.gene050824.t1 | AT3G66654 | 29.878 | 164 | 86 | 5 | 95 | 247 | 82 | 227 | 1.41e-12 | 65.9 |
| MS.gene050824.t1 | AT3G66654 | 29.878 | 164 | 86 | 5 | 95 | 247 | 82 | 227 | 1.41e-12 | 65.9 |
| MS.gene050824.t1 | AT3G66654 | 29.878 | 164 | 86 | 5 | 95 | 247 | 82 | 227 | 1.41e-12 | 65.9 |
Find 54 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTTGGGCAGAATCGTTT+TGG | 0.218231 | 7.4:-5139318 | MS.gene050824:CDS |
| GCATAAGTATCAACCATCTA+TGG | 0.238764 | 7.4:+5138163 | None:intergenic |
| AATTGACTACCATTGGTATT+AGG | 0.256008 | 7.4:+5138641 | None:intergenic |
| AATCAAAGAATTCATGATTC+AGG | 0.260889 | 7.4:-5139093 | MS.gene050824:CDS |
| TAGCCAAGATGTGTTGTCTA+TGG | 0.302130 | 7.4:-5140296 | MS.gene050824:CDS |
| TGTTTCTTTGACGTAGAAAC+TGG | 0.306670 | 7.4:-5139347 | MS.gene050824:CDS |
| TCACATACCGTGTCACAAAT+TGG | 0.359007 | 7.4:-5140265 | MS.gene050824:CDS |
| GACAATCGACATGTCGTGTT+TGG | 0.370445 | 7.4:-5138293 | MS.gene050824:CDS |
| ACCGGTGGAGCTAGTATCTA+TGG | 0.385843 | 7.4:-5138883 | MS.gene050824:CDS |
| GAAACATTTGGTAGTCACTT+TGG | 0.413346 | 7.4:+5139364 | None:intergenic |
| TTCCATTGGCTGCAGGGAAC+CGG | 0.414205 | 7.4:-5138901 | MS.gene050824:intron |
| TAAAATCACATGTTGCTTTG+AGG | 0.423621 | 7.4:-5140222 | MS.gene050824:CDS |
| TGCGGAGAACTGCCCATAGA+TGG | 0.424005 | 7.4:-5138176 | MS.gene050824:CDS |
| GTGTTTGGACATGTTATTGA+TGG | 0.424405 | 7.4:-5138278 | MS.gene050824:CDS |
| AATTTCCGTGCTTTGTGCAC+AGG | 0.435339 | 7.4:-5139260 | MS.gene050824:intron |
| ATCAAAGAATTCATGATTCA+GGG | 0.448304 | 7.4:-5139092 | MS.gene050824:CDS |
| TGTGAGGACACTTGAGTCTC+AGG | 0.450710 | 7.4:-5138246 | MS.gene050824:CDS |
| TTCTACGTCAAAGAAACATT+TGG | 0.461054 | 7.4:+5139352 | None:intergenic |
| GAACCATAGACAACACATCT+TGG | 0.462350 | 7.4:+5140293 | None:intergenic |
| TAATCTTGTGCAGGAGAGAA+AGG | 0.477763 | 7.4:-5139149 | MS.gene050824:intron |
| TTCTTTGATTATACGATGGA+AGG | 0.485601 | 7.4:+5139106 | None:intergenic |
| TGAAAATGAGAAAGTGGGTT+GGG | 0.490663 | 7.4:+5140413 | None:intergenic |
| GCAGTGAAGCATGTTGGTCC+TGG | 0.495639 | 7.4:-5138689 | MS.gene050824:intron |
| CAAGATCAATTAGATATAGT+AGG | 0.497529 | 7.4:-5140174 | MS.gene050824:CDS |
| TGGACATGTTATTGATGGAA+TGG | 0.518793 | 7.4:-5138273 | MS.gene050824:CDS |
| CATTGGCTGCAGGGAACCGG+TGG | 0.542546 | 7.4:-5138898 | MS.gene050824:intron |
| GTTTCTTTGACGTAGAAACT+GGG | 0.547473 | 7.4:-5139346 | MS.gene050824:CDS |
| ACTACCATTGGTATTAGGAC+CGG | 0.552266 | 7.4:+5138646 | None:intergenic |
| CAAACCTGAAAATGAGAAAG+TGG | 0.556937 | 7.4:+5140407 | None:intergenic |
| TTTGCCATGCTCAAAACTCC+AGG | 0.566786 | 7.4:+5138671 | None:intergenic |
| ATGTGTTGTCTATGGTTCAA+AGG | 0.570074 | 7.4:-5140288 | MS.gene050824:CDS |
| GCTTGCCTGTGCACAAAGCA+CGG | 0.576315 | 7.4:+5139255 | None:intergenic |
| AGATTGAAGCAGTTGAGTTG+AGG | 0.584496 | 7.4:+5140436 | None:intergenic |
| ACCATAGATACTAGCTCCAC+CGG | 0.585192 | 7.4:+5138882 | None:intergenic |
| CTGAAAATGAGAAAGTGGGT+TGG | 0.587157 | 7.4:+5140412 | None:intergenic |
| CCGCAATTAACGATTCTGCA+AGG | 0.599554 | 7.4:+5138194 | None:intergenic |
| TGTGCAGGAGAGAAAGGATA+CGG | 0.600737 | 7.4:-5139143 | MS.gene050824:intron |
| CATAAGTATCAACCATCTAT+GGG | 0.602479 | 7.4:+5138164 | None:intergenic |
| CTTCTTGCAGTGAAGCATGT+TGG | 0.605444 | 7.4:-5138695 | MS.gene050824:intron |
| ACTGTAACCAATTTGTGACA+CGG | 0.612206 | 7.4:+5140258 | None:intergenic |
| TGAATTCTTTGATTATACGA+TGG | 0.620498 | 7.4:+5139102 | None:intergenic |
| GAGAAAGGATACGGTTACAA+AGG | 0.621131 | 7.4:-5139134 | MS.gene050824:CDS |
| CCTTGCAGAATCGTTAATTG+CGG | 0.632875 | 7.4:-5138194 | MS.gene050824:CDS |
| TTGAGTCTCAGGAAACAAGC+AGG | 0.634425 | 7.4:-5138235 | MS.gene050824:CDS |
| CAGGGAGGAGACTTCACTGA+GGG | 0.643258 | 7.4:-5139074 | MS.gene050824:CDS |
| TTCTTTGACGTAGAAACTGG+GGG | 0.645557 | 7.4:-5139344 | MS.gene050824:CDS |
| TTTCTTTGACGTAGAAACTG+GGG | 0.649184 | 7.4:-5139345 | MS.gene050824:CDS |
| AATGCCGGTCCTAATACCAA+TGG | 0.661326 | 7.4:-5138650 | MS.gene050824:CDS |
| TTGATGGAATGGATGTTGTG+AGG | 0.678873 | 7.4:-5138262 | MS.gene050824:CDS |
| AAACCTGAAAATGAGAAAGT+GGG | 0.705584 | 7.4:+5140408 | None:intergenic |
| TCTTGCTCCAAATTGTTGCG+TGG | 0.716266 | 7.4:+5140192 | None:intergenic |
| ACATGTCGATTGTCTAACCA+CGG | 0.718954 | 7.4:+5138302 | None:intergenic |
| AAAGAATTCATGATTCAGGG+AGG | 0.735053 | 7.4:-5139089 | MS.gene050824:CDS |
| TCAGGGAGGAGACTTCACTG+AGG | 0.753671 | 7.4:-5139075 | MS.gene050824:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCAATATATATTATTGA+CGG | + | chr7.4:5138712-5138731 | None:intergenic | 10.0% |
| !! | ATAAAAAAATCATTTCAGAT+AGG | + | chr7.4:5139041-5139060 | None:intergenic | 15.0% |
| !! | GTTATATTTGAATATTAGAT+TGG | - | chr7.4:5140187-5140206 | MS.gene050824:CDS | 15.0% |
| !!! | AAAATGTAAGTTTTTCATTT+TGG | - | chr7.4:5138498-5138517 | MS.gene050824:intron | 15.0% |
| !!! | AAATGAAAAACTTACATTTT+CGG | + | chr7.4:5138498-5138517 | None:intergenic | 15.0% |
| !!! | AATGTTTGTTTGTTTTTTTA+AGG | - | chr7.4:5138295-5138314 | MS.gene050824:CDS | 15.0% |
| !!! | ATGTTTGTTTGTTTTTTTAA+GGG | - | chr7.4:5138296-5138315 | MS.gene050824:CDS | 15.0% |
| !!! | GTGTTGAAAATAATTTTTTT+AGG | + | chr7.4:5139907-5139926 | None:intergenic | 15.0% |
| !! | AATAAAAAATTGACTACCAT+TGG | + | chr7.4:5139990-5140009 | None:intergenic | 20.0% |
| !! | CATAGAAACAAATATAACAA+AGG | + | chr7.4:5139621-5139640 | None:intergenic | 20.0% |
| !! | GATTAATGAACAAAAACAAT+TGG | + | chr7.4:5138269-5138288 | None:intergenic | 20.0% |
| !!! | AAATGAGTAAATAGTCATTT+TGG | - | chr7.4:5138654-5138673 | MS.gene050824:CDS | 20.0% |
| !!! | AGTTTTGAAGTAAAAATATC+AGG | + | chr7.4:5140043-5140062 | None:intergenic | 20.0% |
| !!! | ATGGTTTTATTACTGTTATT+AGG | - | chr7.4:5139219-5139238 | MS.gene050824:intron | 20.0% |
| !!! | ATTTTTTATTTGCACTGTTA+AGG | - | chr7.4:5140000-5140019 | MS.gene050824:intron | 20.0% |
| !!! | TAACATAGCATTTTAAAGTT+TGG | - | chr7.4:5139443-5139462 | MS.gene050824:intron | 20.0% |
| !!! | TACTTACTACTGTAATTTTA+AGG | - | chr7.4:5138976-5138995 | MS.gene050824:intron | 20.0% |
| !!! | TTAATTACACTGTTTTAAAC+TGG | + | chr7.4:5139881-5139900 | None:intergenic | 20.0% |
| ! | AAAAATCAATAATCACTGGT+TGG | - | chr7.4:5140108-5140127 | MS.gene050824:intron | 25.0% |
| ! | AATCAAAGAATTCATGATTC+AGG | - | chr7.4:5139528-5139547 | MS.gene050824:intron | 25.0% |
| ! | ATCAAAGAATTCATGATTCA+GGG | - | chr7.4:5139529-5139548 | MS.gene050824:intron | 25.0% |
| ! | CAAGATCAATTAGATATAGT+AGG | - | chr7.4:5138447-5138466 | MS.gene050824:intron | 25.0% |
| ! | CTTAGCATATACAGAAAATA+AGG | + | chr7.4:5140221-5140240 | None:intergenic | 25.0% |
| ! | GCTTAAAAATCAATAATCAC+TGG | - | chr7.4:5140104-5140123 | MS.gene050824:intron | 25.0% |
| ! | GTATCTTTCATTTGTAACAT+TGG | - | chr7.4:5138746-5138765 | MS.gene050824:intron | 25.0% |
| ! | GTCCATAAAATTACTAACAA+AGG | - | chr7.4:5138839-5138858 | MS.gene050824:intron | 25.0% |
| ! | TGAATTCTTTGATTATACGA+TGG | + | chr7.4:5139522-5139541 | None:intergenic | 25.0% |
| ! | TGGTTGTTTATTTACATGAT+TGG | - | chr7.4:5140128-5140147 | MS.gene050824:intron | 25.0% |
| ! | TTGTTAATCACAAAAATCGT+TGG | - | chr7.4:5139139-5139158 | MS.gene050824:CDS | 25.0% |
| !! | GTCCTTTGTTAGTAATTTTA+TGG | + | chr7.4:5138844-5138863 | None:intergenic | 25.0% |
| !!! | GTTTTAAAACGAGATTGTTA+TGG | + | chr7.4:5138616-5138635 | None:intergenic | 25.0% |
| !!! | TGGTTTTTAAAATTTCTCCT+TGG | - | chr7.4:5139847-5139866 | MS.gene050824:intron | 25.0% |
| AAACCTGAAAATGAGAAAGT+GGG | + | chr7.4:5138216-5138235 | None:intergenic | 30.0% | |
| AAGGATGTTATGTTATGACA+TGG | - | chr7.4:5138560-5138579 | MS.gene050824:intron | 30.0% | |
| AATTGACTACCATTGGTATT+AGG | + | chr7.4:5139983-5140002 | None:intergenic | 30.0% | |
| ACTAACAAAGGACACATTTA+GGG | - | chr7.4:5138851-5138870 | MS.gene050824:intron | 30.0% | |
| AGGATGTTATGTTATGACAT+GGG | - | chr7.4:5138561-5138580 | MS.gene050824:intron | 30.0% | |
| CACATTCAAAAAAGTAATCC+AGG | + | chr7.4:5139423-5139442 | None:intergenic | 30.0% | |
| CCATGTATTTGTTTCAATGA+AGG | - | chr7.4:5139667-5139686 | MS.gene050824:intron | 30.0% | |
| CCTTCATTGAAACAAATACA+TGG | + | chr7.4:5139670-5139689 | None:intergenic | 30.0% | |
| GGACGTTTATTATCTTTACA+TGG | - | chr7.4:5139200-5139219 | MS.gene050824:intron | 30.0% | |
| TACTAACAAAGGACACATTT+AGG | - | chr7.4:5138850-5138869 | MS.gene050824:intron | 30.0% | |
| TTAAACTGGAATTAAAGCCA+AGG | + | chr7.4:5139867-5139886 | None:intergenic | 30.0% | |
| TTCTACGTCAAAGAAACATT+TGG | + | chr7.4:5139272-5139291 | None:intergenic | 30.0% | |
| TTCTTTGATTATACGATGGA+AGG | + | chr7.4:5139518-5139537 | None:intergenic | 30.0% | |
| TTTGGTCCTTAAATGTTTGA+GGG | - | chr7.4:5138672-5138691 | MS.gene050824:CDS | 30.0% | |
| ! | ATCAAAGGTGCAGAAAAATA+TGG | + | chr7.4:5139394-5139413 | None:intergenic | 30.0% |
| ! | CGGAAATTTTCAACTGTTTT+AGG | + | chr7.4:5139349-5139368 | None:intergenic | 30.0% |
| ! | TTTTGGTCCTTAAATGTTTG+AGG | - | chr7.4:5138671-5138690 | MS.gene050824:CDS | 30.0% |
| !! | CTAGATTTTTAGATAGTGCT+TGG | - | chr7.4:5139827-5139846 | MS.gene050824:intron | 30.0% |
| !! | TAAAATCACATGTTGCTTTG+AGG | - | chr7.4:5138399-5138418 | MS.gene050824:intron | 30.0% |
| !!! | ATTTTCAGGTTTGCACAAAT+GGG | - | chr7.4:5138224-5138243 | MS.gene050824:CDS | 30.0% |
| AAAGAATTCATGATTCAGGG+AGG | - | chr7.4:5139532-5139551 | MS.gene050824:intron | 35.0% | |
| ACTGTAACCAATTTGTGACA+CGG | + | chr7.4:5138366-5138385 | None:intergenic | 35.0% | |
| ACTTTAATGCCTCACACATT+TGG | - | chr7.4:5138905-5138924 | MS.gene050824:intron | 35.0% | |
| ATGTGTTGTCTATGGTTCAA+AGG | - | chr7.4:5138333-5138352 | MS.gene050824:intron | 35.0% | |
| CAAACCTGAAAATGAGAAAG+TGG | + | chr7.4:5138217-5138236 | None:intergenic | 35.0% | |
| CACTCAAAATGTGTTTCCAT+TGG | - | chr7.4:5139706-5139725 | MS.gene050824:intron | 35.0% | |
| CTGTGTTGTGATTAAGATGT+TGG | - | chr7.4:5139179-5139198 | MS.gene050824:intron | 35.0% | |
| CTTTAATGCCTCACACATTT+GGG | - | chr7.4:5138906-5138925 | MS.gene050824:intron | 35.0% | |
| GTGTTTGGACATGTTATTGA+TGG | - | chr7.4:5140343-5140362 | MS.gene050824:intron | 35.0% | |
| GTTAGTACAATAATTGTCCC+TGG | - | chr7.4:5138526-5138545 | MS.gene050824:intron | 35.0% | |
| GTTTCTTTGACGTAGAAACT+GGG | - | chr7.4:5139275-5139294 | MS.gene050824:CDS | 35.0% | |
| TAATCCAGGTACAAGATCAA+AGG | + | chr7.4:5139409-5139428 | None:intergenic | 35.0% | |
| TGAAACAAATACATGGCAAG+TGG | + | chr7.4:5139663-5139682 | None:intergenic | 35.0% | |
| TGGACATGTTATTGATGGAA+TGG | - | chr7.4:5140348-5140367 | MS.gene050824:intron | 35.0% | |
| TGTTTCTTTGACGTAGAAAC+TGG | - | chr7.4:5139274-5139293 | MS.gene050824:CDS | 35.0% | |
| TTGGTCCTTAAATGTTTGAG+GGG | - | chr7.4:5138673-5138692 | MS.gene050824:CDS | 35.0% | |
| TTTCTTTGACGTAGAAACTG+GGG | - | chr7.4:5139276-5139295 | MS.gene050824:CDS | 35.0% | |
| ! | GAAACATTTGGTAGTCACTT+TGG | + | chr7.4:5139260-5139279 | None:intergenic | 35.0% |
| ! | TGAAAATGAGAAAGTGGGTT+GGG | + | chr7.4:5138211-5138230 | None:intergenic | 35.0% |
| !! | ATTTTGATCCCAAATGTGTG+AGG | + | chr7.4:5138917-5138936 | None:intergenic | 35.0% |
| !!! | CATTTTCAGGTTTGCACAAA+TGG | - | chr7.4:5138223-5138242 | MS.gene050824:CDS | 35.0% |
| !!! | TTTTCAGGTTTGCACAAATG+GGG | - | chr7.4:5138225-5138244 | MS.gene050824:CDS | 35.0% |
| AACATGCAACAGAGACATAC+AGG | + | chr7.4:5139790-5139809 | None:intergenic | 40.0% | |
| ACTACCATTGGTATTAGGAC+CGG | + | chr7.4:5139978-5139997 | None:intergenic | 40.0% | |
| ATCCTTCAACAACATCTCCA+GGG | + | chr7.4:5138546-5138565 | None:intergenic | 40.0% | |
| CATGATTGGAAAGCTCACTA+TGG | - | chr7.4:5140142-5140161 | MS.gene050824:CDS | 40.0% | |
| CCTTGCAGAATCGTTAATTG+CGG | - | chr7.4:5140427-5140446 | MS.gene050824:CDS | 40.0% | |
| CTGAAAATGAGAAAGTGGGT+TGG | + | chr7.4:5138212-5138231 | None:intergenic | 40.0% | |
| GAACCATAGACAACACATCT+TGG | + | chr7.4:5138331-5138350 | None:intergenic | 40.0% | |
| GACAACCCCTCAAACATTTA+AGG | + | chr7.4:5138681-5138700 | None:intergenic | 40.0% | |
| GAGAAAGGATACGGTTACAA+AGG | - | chr7.4:5139487-5139506 | MS.gene050824:intron | 40.0% | |
| TAATCTTGTGCAGGAGAGAA+AGG | - | chr7.4:5139472-5139491 | MS.gene050824:intron | 40.0% | |
| TAGCCAAGATGTGTTGTCTA+TGG | - | chr7.4:5138325-5138344 | MS.gene050824:intron | 40.0% | |
| TCACATACCGTGTCACAAAT+TGG | - | chr7.4:5138356-5138375 | MS.gene050824:intron | 40.0% | |
| TGGCTTCAATAATCTTGTGC+AGG | - | chr7.4:5139463-5139482 | MS.gene050824:intron | 40.0% | |
| TTCTTTGACGTAGAAACTGG+GGG | - | chr7.4:5139277-5139296 | MS.gene050824:CDS | 40.0% | |
| TTGATGGAATGGATGTTGTG+AGG | - | chr7.4:5140359-5140378 | MS.gene050824:intron | 40.0% | |
| ! | ACATGTCGATTGTCTAACCA+CGG | + | chr7.4:5140322-5140341 | None:intergenic | 40.0% |
| ! | ACGATTCTGCAAGGCTTTTT+AGG | + | chr7.4:5140421-5140440 | None:intergenic | 40.0% |
| ! | AGATTGAAGCAGTTGAGTTG+AGG | + | chr7.4:5138188-5138207 | None:intergenic | 40.0% |
| ! | ATCTTTGGGCAGAATCGTTT+TGG | - | chr7.4:5139303-5139322 | MS.gene050824:CDS | 40.0% |
| ! | ATTTTATGATGCAGACTCCG+TGG | - | chr7.4:5140302-5140321 | MS.gene050824:CDS | 40.0% |
| ! | CAACCCACTTTCTCATTTTC+AGG | - | chr7.4:5138210-5138229 | MS.gene050824:CDS | 40.0% |
| ! | CGATTCTGCAAGGCTTTTTA+GGG | + | chr7.4:5140420-5140439 | None:intergenic | 40.0% |
| ! | GTTTGCACAAATGGGGTTTT+GGG | - | chr7.4:5138232-5138251 | MS.gene050824:CDS | 40.0% |
| ! | TCTTTGGGCAGAATCGTTTT+GGG | - | chr7.4:5139304-5139323 | MS.gene050824:CDS | 40.0% |
| ! | TTTTCTGCCACGCAACAATT+TGG | - | chr7.4:5138422-5138441 | MS.gene050824:intron | 40.0% |
| !! | AGAATCGTTTTGGGCTTGTT+TGG | - | chr7.4:5139313-5139332 | MS.gene050824:CDS | 40.0% |
| AATGCCGGTCCTAATACCAA+TGG | - | chr7.4:5139971-5139990 | MS.gene050824:intron | 45.0% | |
| AATTTCCGTGCTTTGTGCAC+AGG | - | chr7.4:5139361-5139380 | MS.gene050824:CDS | 45.0% | |
| ACCATAGATACTAGCTCCAC+CGG | + | chr7.4:5139742-5139761 | None:intergenic | 45.0% | |
| AGAAACTGGGGGTCAATCTT+TGG | - | chr7.4:5139288-5139307 | MS.gene050824:CDS | 45.0% | |
| CATCCTTCAACAACATCTCC+AGG | + | chr7.4:5138547-5138566 | None:intergenic | 45.0% | |
| CCGCAATTAACGATTCTGCA+AGG | + | chr7.4:5140430-5140449 | None:intergenic | 45.0% | |
| CTTCTTGCAGTGAAGCATGT+TGG | - | chr7.4:5139926-5139945 | MS.gene050824:intron | 45.0% | |
| GAAACTGGGGGTCAATCTTT+GGG | - | chr7.4:5139289-5139308 | MS.gene050824:CDS | 45.0% | |
| GACAATCGACATGTCGTGTT+TGG | - | chr7.4:5140328-5140347 | MS.gene050824:intron | 45.0% | |
| TCTTGCTCCAAATTGTTGCG+TGG | + | chr7.4:5138432-5138451 | None:intergenic | 45.0% | |
| TGCACCTTTGATCTTGTACC+TGG | - | chr7.4:5139402-5139421 | MS.gene050824:intron | 45.0% | |
| TGTGCAGGAGAGAAAGGATA+CGG | - | chr7.4:5139478-5139497 | MS.gene050824:intron | 45.0% | |
| TTGAGTCTCAGGAAACAAGC+AGG | - | chr7.4:5140386-5140405 | MS.gene050824:intron | 45.0% | |
| TTGGAAAGCTCACTATGGCA+TGG | - | chr7.4:5140147-5140166 | MS.gene050824:CDS | 45.0% | |
| TTTGCCATGCTCAAAACTCC+AGG | + | chr7.4:5139953-5139972 | None:intergenic | 45.0% | |
| ! | AATGTGTTTCCATTGGCTGC+AGG | - | chr7.4:5139713-5139732 | MS.gene050824:intron | 45.0% |
| ! | ATGTGTTTCCATTGGCTGCA+GGG | - | chr7.4:5139714-5139733 | MS.gene050824:intron | 45.0% |
| ! | GGTTTGCACAAATGGGGTTT+TGG | - | chr7.4:5138231-5138250 | MS.gene050824:CDS | 45.0% |
| !! | GTTTTGAGCATGGCAAATGC+CGG | - | chr7.4:5139956-5139975 | MS.gene050824:intron | 45.0% |
| ACCGGTGGAGCTAGTATCTA+TGG | - | chr7.4:5139738-5139757 | MS.gene050824:intron | 50.0% | |
| GTCCCTGGAGATGTTGTTGA+AGG | - | chr7.4:5138541-5138560 | MS.gene050824:intron | 50.0% | |
| TGTGAGGACACTTGAGTCTC+AGG | - | chr7.4:5140375-5140394 | MS.gene050824:intron | 50.0% | |
| !! | CGTTTTGGGCTTGTTTGGAG+AGG | - | chr7.4:5139318-5139337 | MS.gene050824:CDS | 50.0% |
| !!! | TGGTCCTGGAGTTTTGAGCA+TGG | - | chr7.4:5139946-5139965 | MS.gene050824:intron | 50.0% |
| CAGGGAGGAGACTTCACTGA+GGG | - | chr7.4:5139547-5139566 | MS.gene050824:intron | 55.0% | |
| GCAGTGAAGCATGTTGGTCC+TGG | - | chr7.4:5139932-5139951 | MS.gene050824:intron | 55.0% | |
| GCTTGCCTGTGCACAAAGCA+CGG | + | chr7.4:5139369-5139388 | None:intergenic | 55.0% | |
| TCAGGGAGGAGACTTCACTG+AGG | - | chr7.4:5139546-5139565 | MS.gene050824:intron | 55.0% | |
| TGCGGAGAACTGCCCATAGA+TGG | - | chr7.4:5140445-5140464 | MS.gene050824:CDS | 55.0% | |
| ! | TTCCATTGGCTGCAGGGAAC+CGG | - | chr7.4:5139720-5139739 | MS.gene050824:intron | 55.0% |
| ! | CATTGGCTGCAGGGAACCGG+TGG | - | chr7.4:5139723-5139742 | MS.gene050824:intron | 65.0% |
| !! | CACCGGTTCCCTGCAGCCAA+TGG | + | chr7.4:5139725-5139744 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 5138172 | 5140471 | 5138172 | ID=MS.gene050824 |
| chr7.4 | mRNA | 5138172 | 5140471 | 5138172 | ID=MS.gene050824.t1;Parent=MS.gene050824 |
| chr7.4 | exon | 5140412 | 5140471 | 5140412 | ID=MS.gene050824.t1.exon1;Parent=MS.gene050824.t1 |
| chr7.4 | CDS | 5140412 | 5140471 | 5140412 | ID=cds.MS.gene050824.t1;Parent=MS.gene050824.t1 |
| chr7.4 | exon | 5140141 | 5140326 | 5140141 | ID=MS.gene050824.t1.exon2;Parent=MS.gene050824.t1 |
| chr7.4 | CDS | 5140141 | 5140326 | 5140141 | ID=cds.MS.gene050824.t1;Parent=MS.gene050824.t1 |
| chr7.4 | exon | 5139261 | 5139402 | 5139261 | ID=MS.gene050824.t1.exon3;Parent=MS.gene050824.t1 |
| chr7.4 | CDS | 5139261 | 5139402 | 5139261 | ID=cds.MS.gene050824.t1;Parent=MS.gene050824.t1 |
| chr7.4 | exon | 5139070 | 5139158 | 5139070 | ID=MS.gene050824.t1.exon4;Parent=MS.gene050824.t1 |
| chr7.4 | CDS | 5139070 | 5139158 | 5139070 | ID=cds.MS.gene050824.t1;Parent=MS.gene050824.t1 |
| chr7.4 | exon | 5138854 | 5138908 | 5138854 | ID=MS.gene050824.t1.exon5;Parent=MS.gene050824.t1 |
| chr7.4 | CDS | 5138854 | 5138908 | 5138854 | ID=cds.MS.gene050824.t1;Parent=MS.gene050824.t1 |
| chr7.4 | exon | 5138622 | 5138707 | 5138622 | ID=MS.gene050824.t1.exon6;Parent=MS.gene050824.t1 |
| chr7.4 | CDS | 5138622 | 5138707 | 5138622 | ID=cds.MS.gene050824.t1;Parent=MS.gene050824.t1 |
| chr7.4 | exon | 5138172 | 5138327 | 5138172 | ID=MS.gene050824.t1.exon7;Parent=MS.gene050824.t1 |
| chr7.4 | CDS | 5138172 | 5138327 | 5138172 | ID=cds.MS.gene050824.t1;Parent=MS.gene050824.t1 |
| Gene Sequence |
| Protein sequence |
