Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34094.t1 | XP_013469426.1 | 100 | 230 | 0 | 0 | 1 | 230 | 1 | 230 | 1.10E-123 | 452.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34094.t1 | Q9C835 | 59.7 | 233 | 88 | 2 | 1 | 227 | 1 | 233 | 6.2e-67 | 255.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34094.t1 | B7FHA8 | 100.0 | 230 | 0 | 0 | 1 | 230 | 1 | 230 | 7.9e-124 | 452.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene34094 | 0.832097 | 1.15E-55 | -1.69E-46 |
| MS.gene04998 | MS.gene34094 | 0.816593 | 5.11E-52 | -1.69E-46 |
| MS.gene050414 | MS.gene34094 | 0.806813 | 6.85E-50 | -1.69E-46 |
| MS.gene050945 | MS.gene34094 | 0.836546 | 8.78E-57 | -1.69E-46 |
| MS.gene051043 | MS.gene34094 | 0.834006 | 3.85E-56 | -1.69E-46 |
| MS.gene051234 | MS.gene34094 | 0.824286 | 8.77E-54 | -1.69E-46 |
| MS.gene051699 | MS.gene34094 | 0.810268 | 1.25E-50 | -1.69E-46 |
| MS.gene051902 | MS.gene34094 | 0.801438 | 9.00E-49 | -1.69E-46 |
| MS.gene051959 | MS.gene34094 | 0.800604 | 1.33E-48 | -1.69E-46 |
| MS.gene052016 | MS.gene34094 | 0.806643 | 7.45E-50 | -1.69E-46 |
| MS.gene052296 | MS.gene34094 | 0.807136 | 5.86E-50 | -1.69E-46 |
| MS.gene052533 | MS.gene34094 | 0.801895 | 7.26E-49 | -1.69E-46 |
| MS.gene054178 | MS.gene34094 | 0.820019 | 8.56E-53 | -1.69E-46 |
| MS.gene054413 | MS.gene34094 | 0.835889 | 1.29E-56 | -1.69E-46 |
| MS.gene054892 | MS.gene34094 | 0.803264 | 3.79E-49 | -1.69E-46 |
| MS.gene054893 | MS.gene34094 | 0.80784 | 4.15E-50 | -1.69E-46 |
| MS.gene057093 | MS.gene34094 | 0.802726 | 4.89E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene34094 | -0.818951 | 1.50E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene34094 | 0.835162 | 1.97E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34094.t1 | MTR_1g094065 | 100.000 | 230 | 0 | 0 | 1 | 230 | 1 | 230 | 4.11e-173 | 475 |
| MS.gene34094.t1 | MTR_1g035360 | 72.926 | 229 | 60 | 2 | 1 | 228 | 1 | 228 | 9.04e-121 | 343 |
| MS.gene34094.t1 | MTR_2g085075 | 35.976 | 164 | 99 | 2 | 71 | 228 | 453 | 616 | 5.31e-27 | 108 |
| MS.gene34094.t1 | MTR_7g105220 | 33.113 | 151 | 95 | 2 | 83 | 227 | 13 | 163 | 1.00e-22 | 90.9 |
| MS.gene34094.t1 | MTR_8g036015 | 33.775 | 151 | 92 | 3 | 83 | 226 | 4 | 153 | 1.21e-18 | 80.1 |
| MS.gene34094.t1 | MTR_5g015500 | 34.641 | 153 | 92 | 3 | 80 | 225 | 305 | 456 | 4.45e-18 | 82.8 |
| MS.gene34094.t1 | MTR_5g015500 | 34.641 | 153 | 92 | 3 | 80 | 225 | 345 | 496 | 5.45e-18 | 82.8 |
| MS.gene34094.t1 | MTR_4g086760 | 36.129 | 155 | 80 | 7 | 88 | 224 | 17 | 170 | 8.89e-17 | 78.6 |
| MS.gene34094.t1 | MTR_4g086760 | 36.129 | 155 | 80 | 7 | 88 | 224 | 17 | 170 | 9.60e-17 | 77.8 |
| MS.gene34094.t1 | MTR_4g086760 | 36.129 | 155 | 80 | 7 | 88 | 224 | 17 | 170 | 1.04e-16 | 78.2 |
| MS.gene34094.t1 | MTR_7g110980 | 34.437 | 151 | 82 | 6 | 87 | 224 | 108 | 254 | 3.88e-16 | 75.5 |
| MS.gene34094.t1 | MTR_4g075290 | 35.220 | 159 | 77 | 6 | 82 | 219 | 11 | 164 | 5.31e-15 | 70.9 |
| MS.gene34094.t1 | MTR_1g117010 | 35.811 | 148 | 72 | 7 | 89 | 219 | 94 | 235 | 2.71e-14 | 70.1 |
| MS.gene34094.t1 | MTR_1g117010 | 35.811 | 148 | 72 | 7 | 89 | 219 | 94 | 235 | 2.71e-14 | 70.1 |
| MS.gene34094.t1 | MTR_8g079690 | 33.758 | 157 | 81 | 7 | 88 | 224 | 17 | 170 | 4.38e-14 | 70.9 |
| MS.gene34094.t1 | MTR_3g117750 | 35.897 | 156 | 66 | 7 | 89 | 219 | 26 | 172 | 7.17e-14 | 68.2 |
| MS.gene34094.t1 | MTR_3g463900 | 32.237 | 152 | 84 | 7 | 89 | 223 | 48 | 197 | 5.49e-13 | 65.9 |
| MS.gene34094.t1 | MTR_8g040180 | 33.333 | 156 | 87 | 7 | 85 | 224 | 28 | 182 | 1.02e-12 | 64.7 |
| MS.gene34094.t1 | MTR_2g023120 | 27.922 | 154 | 101 | 3 | 80 | 224 | 13 | 165 | 4.48e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34094.t1 | AT3G66654 | 59.657 | 233 | 88 | 3 | 1 | 227 | 1 | 233 | 1.58e-90 | 266 |
| MS.gene34094.t1 | AT3G66654 | 59.657 | 233 | 88 | 3 | 1 | 227 | 1 | 233 | 1.58e-90 | 266 |
| MS.gene34094.t1 | AT3G66654 | 59.657 | 233 | 88 | 3 | 1 | 227 | 1 | 233 | 1.58e-90 | 266 |
| MS.gene34094.t1 | AT3G66654 | 59.657 | 233 | 88 | 3 | 1 | 227 | 1 | 233 | 1.58e-90 | 266 |
| MS.gene34094.t1 | AT3G66654 | 59.657 | 233 | 88 | 3 | 1 | 227 | 1 | 233 | 1.58e-90 | 266 |
| MS.gene34094.t1 | AT2G47320 | 54.348 | 230 | 101 | 3 | 1 | 228 | 1 | 228 | 2.79e-79 | 238 |
| MS.gene34094.t1 | AT3G44600 | 36.000 | 175 | 101 | 3 | 60 | 228 | 461 | 630 | 3.58e-27 | 109 |
| MS.gene34094.t1 | AT2G36130 | 31.333 | 150 | 97 | 2 | 79 | 222 | 9 | 158 | 2.51e-21 | 87.4 |
| MS.gene34094.t1 | AT1G01940 | 32.667 | 150 | 95 | 2 | 83 | 226 | 4 | 153 | 3.88e-19 | 81.3 |
| MS.gene34094.t1 | AT5G67530 | 33.766 | 154 | 94 | 4 | 80 | 226 | 344 | 496 | 1.91e-18 | 84.0 |
| MS.gene34094.t1 | AT5G13120 | 35.762 | 151 | 76 | 6 | 89 | 224 | 107 | 251 | 5.10e-16 | 75.1 |
| MS.gene34094.t1 | AT5G13120 | 35.762 | 151 | 76 | 6 | 89 | 224 | 103 | 247 | 5.18e-16 | 75.1 |
| MS.gene34094.t1 | AT2G16600 | 35.374 | 147 | 77 | 6 | 87 | 216 | 17 | 162 | 1.55e-15 | 72.0 |
| MS.gene34094.t1 | AT2G15790 | 35.484 | 155 | 81 | 7 | 88 | 224 | 17 | 170 | 2.85e-15 | 74.3 |
| MS.gene34094.t1 | AT4G34870 | 35.135 | 148 | 80 | 5 | 86 | 217 | 15 | 162 | 1.76e-14 | 69.3 |
| MS.gene34094.t1 | AT2G29960 | 33.775 | 151 | 77 | 7 | 87 | 223 | 44 | 185 | 4.54e-13 | 65.9 |
| MS.gene34094.t1 | AT4G33060 | 28.966 | 145 | 93 | 3 | 80 | 215 | 13 | 156 | 1.04e-12 | 67.0 |
| MS.gene34094.t1 | AT3G56070 | 31.034 | 145 | 70 | 7 | 89 | 210 | 18 | 155 | 3.73e-11 | 60.5 |
| MS.gene34094.t1 | AT3G56070 | 31.034 | 145 | 70 | 7 | 89 | 210 | 18 | 155 | 3.73e-11 | 60.5 |
Find 53 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTAGGTTGAAAATAGTTT+TGG | 0.284508 | 1.2:-74531811 | MS.gene34094:intron |
| TGATTTGTCTGCAGTCAAAA+AGG | 0.285296 | 1.2:-74530276 | MS.gene34094:intron |
| TACACTCCTAAAATAACTAT+TGG | 0.286009 | 1.2:-74529351 | MS.gene34094:CDS |
| AATGAGAAGCTTATTGTGTT+TGG | 0.290264 | 1.2:-74529947 | MS.gene34094:CDS |
| CTACGCTTTGATTCTTGTCT+TGG | 0.316133 | 1.2:-74533140 | MS.gene34094:CDS |
| TATTAAGCACTATGTGATTC+AGG | 0.332742 | 1.2:-74530223 | MS.gene34094:CDS |
| TTGACGAATTTATTGACTTA+TGG | 0.343573 | 1.2:-74531543 | MS.gene34094:intron |
| ATAAATTCGTCAACAGCTTC+AGG | 0.351785 | 1.2:+74531553 | None:intergenic |
| CATACAGACATTGGTCTAAC+AGG | 0.351889 | 1.2:-74533096 | MS.gene34094:intron |
| CAAGGGAGAGGATGTTGTTC+AGG | 0.390816 | 1.2:-74529915 | MS.gene34094:intron |
| AAAGAATAAGAAAACCTTGC+AGG | 0.393868 | 1.2:+74530147 | None:intergenic |
| TAGGTCTTAAATACATCTAA+AGG | 0.399050 | 1.2:-74531610 | MS.gene34094:CDS |
| TTTGTTGGTGTGTTTGCCCT+TGG | 0.409985 | 1.2:+74530012 | None:intergenic |
| GCTTTGATTCTTGTCTTGGT+TGG | 0.410038 | 1.2:-74533136 | MS.gene34094:CDS |
| ACACTCCTAAAATAACTATT+GGG | 0.416681 | 1.2:-74529350 | MS.gene34094:CDS |
| ATAAGCTTCTCATTTAGATC+TGG | 0.424089 | 1.2:+74529956 | None:intergenic |
| AAGGCACAGGAGCAGCTGAT+TGG | 0.470138 | 1.2:-74530188 | MS.gene34094:CDS |
| GCAGGGGATGGTCAAGGCAC+AGG | 0.470569 | 1.2:-74530201 | MS.gene34094:CDS |
| GAAAAGATCAAATCCTTTGT+TGG | 0.478754 | 1.2:+74529997 | None:intergenic |
| TTCTCATTTAGATCTGGAAT+CGG | 0.478846 | 1.2:+74529962 | None:intergenic |
| AGGTCTTAAATACATCTAAA+GGG | 0.486599 | 1.2:-74531609 | MS.gene34094:CDS |
| CTCTGTTACAACAAAGCAAA+AGG | 0.489993 | 1.2:-74533204 | MS.gene34094:CDS |
| GCAGCTGATTGGAACTTAAG+AGG | 0.490971 | 1.2:-74530177 | MS.gene34094:CDS |
| AAAGGAAGAAGGGACCTTCT+CGG | 0.493022 | 1.2:-74533186 | MS.gene34094:CDS |
| ACAACAAAGCAAAAGGAAGA+AGG | 0.520495 | 1.2:-74533197 | MS.gene34094:CDS |
| AATGTCTGTATGTAGCCAAA+AGG | 0.524194 | 1.2:+74533107 | None:intergenic |
| AAGCACTATGTGATTCAGGC+AGG | 0.525167 | 1.2:-74530219 | MS.gene34094:CDS |
| TCGAAGAAATCTGAGCTACC+TGG | 0.535071 | 1.2:-74531784 | MS.gene34094:CDS |
| CTTTGTTGTAACAGAGCCTG+AGG | 0.536853 | 1.2:+74533211 | None:intergenic |
| AATGGCTAGGATCAAACCTC+AGG | 0.537124 | 1.2:-74533227 | MS.gene34094:CDS |
| AAACATGAAGCATTCATGCT+TGG | 0.537837 | 1.2:-74530040 | MS.gene34094:CDS |
| ATGAAACTTACAGCATATCC+AGG | 0.544358 | 1.2:+74531766 | None:intergenic |
| ATTCCAGGAAATCGAAGAAG+TGG | 0.550139 | 1.2:-74529388 | MS.gene34094:intron |
| GCACTATGTGATTCAGGCAG+GGG | 0.552477 | 1.2:-74530217 | MS.gene34094:CDS |
| GTGTTTGGACAAGTCGTCAA+GGG | 0.558972 | 1.2:-74529932 | MS.gene34094:CDS |
| TGGACAAGTCGTCAAGGGAG+AGG | 0.559232 | 1.2:-74529927 | MS.gene34094:CDS |
| CTCTCAAACAGAAGGTCTGA+AGG | 0.559435 | 1.2:-74529314 | None:intergenic |
| TAGGATTAGGTTAAATGGCT+AGG | 0.565103 | 1.2:-74533240 | None:intergenic |
| ATTCATGCTTGGAACATCCA+AGG | 0.573047 | 1.2:-74530029 | MS.gene34094:CDS |
| ATTCAGGCAGGGGATGGTCA+AGG | 0.591509 | 1.2:-74530207 | MS.gene34094:CDS |
| TATGTGATTCAGGCAGGGGA+TGG | 0.596403 | 1.2:-74530213 | MS.gene34094:CDS |
| CAACAAAGCAAAAGGAAGAA+GGG | 0.596730 | 1.2:-74533196 | MS.gene34094:CDS |
| TTCATGCTTGGAACATCCAA+GGG | 0.601739 | 1.2:-74530028 | MS.gene34094:CDS |
| TATAATAGTAGAACTGTACA+AGG | 0.602132 | 1.2:-74531584 | MS.gene34094:CDS |
| AGCACTATGTGATTCAGGCA+GGG | 0.602224 | 1.2:-74530218 | MS.gene34094:CDS |
| AAATAACTTGTCAGTCTCTG+AGG | 0.605740 | 1.2:-74532051 | MS.gene34094:CDS |
| AAGGGCAAACACACCAACAA+AGG | 0.607399 | 1.2:-74530010 | MS.gene34094:CDS |
| TGTGTTTGGACAAGTCGTCA+AGG | 0.618995 | 1.2:-74529933 | MS.gene34094:CDS |
| TGATGTGACTCTCAAACAGA+AGG | 0.625289 | 1.2:-74529322 | MS.gene34094:CDS |
| TAAGAGGAAAGCAACCTGCA+AGG | 0.628079 | 1.2:-74530161 | MS.gene34094:intron |
| CTAGCCGCGCTAATCCGAGA+AGG | 0.659399 | 1.2:+74533172 | None:intergenic |
| TAACTTGTCAGTCTCTGAGG+AGG | 0.678198 | 1.2:-74532048 | MS.gene34094:intron |
| GGGACCTTCTCGGATTAGCG+CGG | 0.730312 | 1.2:-74533176 | MS.gene34094:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTAATTGAAATTATTATA+TGG | - | chr1.2:74530872-74530891 | MS.gene34094:intron | 10.0% |
| !!! | TTATATTGATTGAAAATAAA+TGG | + | chr1.2:74532811-74532830 | None:intergenic | 10.0% |
| !! | AAAAATGCTAAAAAATTCAA+TGG | + | chr1.2:74530286-74530305 | None:intergenic | 15.0% |
| !! | ATTGAAAATAAATGGAAAAA+TGG | + | chr1.2:74532803-74532822 | None:intergenic | 15.0% |
| !! | TATCACTTTATATGTAATTA+TGG | - | chr1.2:74532873-74532892 | MS.gene34094:intron | 15.0% |
| !! | TTTAGTAATGAATACAATAA+CGG | - | chr1.2:74532910-74532929 | MS.gene34094:intron | 15.0% |
| !! | TTTATGTTGGAAAATAAAAA+GGG | - | chr1.2:74529960-74529979 | MS.gene34094:CDS | 15.0% |
| !!! | AGAGAAAATATTTTTTATGT+TGG | - | chr1.2:74529947-74529966 | MS.gene34094:CDS | 15.0% |
| !!! | TTTTATGTTGGAAAATAAAA+AGG | - | chr1.2:74529959-74529978 | MS.gene34094:CDS | 15.0% |
| !!! | TTTTCAATCAATATAAATCA+AGG | - | chr1.2:74532815-74532834 | MS.gene34094:intron | 15.0% |
| !! | AATCAAGAGTTTCAATATTA+AGG | - | chr1.2:74533107-74533126 | MS.gene34094:CDS | 20.0% |
| !! | ACCTATAATAATGAAGAAAT+AGG | + | chr1.2:74530918-74530937 | None:intergenic | 20.0% |
| !! | AGTGATAAATCAACAAAAAT+TGG | + | chr1.2:74532860-74532879 | None:intergenic | 20.0% |
| !! | ATATATTTCAGCTAAGATTA+TGG | + | chr1.2:74531223-74531242 | None:intergenic | 20.0% |
| !! | ATTTGTGCTATATATAAGAT+TGG | + | chr1.2:74531743-74531762 | None:intergenic | 20.0% |
| !! | GCCAATTTATAAATAAAACA+CGG | - | chr1.2:74530103-74530122 | MS.gene34094:intron | 20.0% |
| !! | TCACCAAAAAAAAAAAAAAG+AGG | + | chr1.2:74531275-74531294 | None:intergenic | 20.0% |
| !! | TTAGTATAAGTAAGAATACT+AGG | - | chr1.2:74531717-74531736 | MS.gene34094:intron | 20.0% |
| !! | TTCCATATTAAAAACTTTGT+TGG | + | chr1.2:74531041-74531060 | None:intergenic | 20.0% |
| !!! | AATTTTGACATCTGTATAAA+TGG | - | chr1.2:74532962-74532981 | MS.gene34094:intron | 20.0% |
| !!! | ACCGTGTTTTATTTATAAAT+TGG | + | chr1.2:74530107-74530126 | None:intergenic | 20.0% |
| !!! | AGTCCTCTTTTTTTTTTTTT+TGG | - | chr1.2:74531269-74531288 | MS.gene34094:intron | 20.0% |
| !!! | ATCTTAGCTGAAATATATTT+TGG | - | chr1.2:74531225-74531244 | MS.gene34094:intron | 20.0% |
| !!! | CAGTTATATGATTTTAAAGA+AGG | - | chr1.2:74530336-74530355 | MS.gene34094:intron | 20.0% |
| !!! | CTTTAAAATCATATAACTGA+TGG | + | chr1.2:74530335-74530354 | None:intergenic | 20.0% |
| !!! | TCTATTTTTCTCATACAAAT+AGG | - | chr1.2:74530386-74530405 | MS.gene34094:intron | 20.0% |
| !!! | TGAAATGCTTGATAATTTTT+GGG | - | chr1.2:74529629-74529648 | MS.gene34094:intron | 20.0% |
| !!! | TTCCAACAAAGTTTTTAATA+TGG | - | chr1.2:74531036-74531055 | MS.gene34094:intron | 20.0% |
| !!! | TTTTATTTATAAATTGGCCA+TGG | + | chr1.2:74530101-74530120 | None:intergenic | 20.0% |
| ! | AAAGTAAGAAATGAATGGTT+AGG | + | chr1.2:74530442-74530461 | None:intergenic | 25.0% |
| ! | AATTATGCAAAAAACCTTCA+TGG | + | chr1.2:74532754-74532773 | None:intergenic | 25.0% |
| ! | ACACTCCTAAAATAACTATT+GGG | - | chr1.2:74533193-74533212 | MS.gene34094:CDS | 25.0% |
| ! | ACAGATGTCAAAATTAGTAT+GGG | + | chr1.2:74532957-74532976 | None:intergenic | 25.0% |
| ! | AGGTCTTAAATACATCTAAA+GGG | - | chr1.2:74530934-74530953 | MS.gene34094:intron | 25.0% |
| ! | AGTAGTCTGTTCATTATAAA+TGG | - | chr1.2:74532195-74532214 | MS.gene34094:intron | 25.0% |
| ! | AGTGATAGAGAGATAATATA+GGG | - | chr1.2:74529898-74529917 | MS.gene34094:intron | 25.0% |
| ! | ATATTACATAACACTATTCC+AGG | - | chr1.2:74533140-74533159 | MS.gene34094:CDS | 25.0% |
| ! | CAAATTTCCTTTGTCATATA+AGG | - | chr1.2:74531616-74531635 | MS.gene34094:intron | 25.0% |
| ! | CAGTTAAAGTAAGAAATGAA+TGG | + | chr1.2:74530447-74530466 | None:intergenic | 25.0% |
| ! | GATGTATAAAACATGTTACA+CGG | + | chr1.2:74531859-74531878 | None:intergenic | 25.0% |
| ! | GTAGTCTGTTCATTATAAAT+GGG | - | chr1.2:74532196-74532215 | MS.gene34094:intron | 25.0% |
| ! | TACACTCCTAAAATAACTAT+TGG | - | chr1.2:74533192-74533211 | MS.gene34094:CDS | 25.0% |
| ! | TACAGATGTCAAAATTAGTA+TGG | + | chr1.2:74532958-74532977 | None:intergenic | 25.0% |
| ! | TAGAAAATTATACAACTCAC+TGG | + | chr1.2:74532452-74532471 | None:intergenic | 25.0% |
| ! | TAGGTCTTAAATACATCTAA+AGG | - | chr1.2:74530933-74530952 | MS.gene34094:intron | 25.0% |
| ! | TATAATAGTAGAACTGTACA+AGG | - | chr1.2:74530959-74530978 | MS.gene34094:intron | 25.0% |
| ! | TATTTGTGTCTGAGAAATAA+TGG | - | chr1.2:74533059-74533078 | MS.gene34094:intron | 25.0% |
| ! | TTCTTCAATGAAGTTTAGAA+TGG | - | chr1.2:74530848-74530867 | MS.gene34094:intron | 25.0% |
| !! | AAGTGCTGTAAATATTACTT+GGG | + | chr1.2:74531188-74531207 | None:intergenic | 25.0% |
| !! | ATATTCGATTTTCTGTATTC+TGG | - | chr1.2:74529992-74530011 | MS.gene34094:CDS | 25.0% |
| !! | GCCTATTTCTTCATTATTAT+AGG | - | chr1.2:74530914-74530933 | MS.gene34094:intron | 25.0% |
| !! | GTGAAATGTTGTTATTGATA+TGG | + | chr1.2:74531323-74531342 | None:intergenic | 25.0% |
| !! | GTTGTTATTGATATGGAATA+TGG | + | chr1.2:74531316-74531335 | None:intergenic | 25.0% |
| !! | TCATATCTTGTTTCTTTGTT+AGG | - | chr1.2:74531344-74531363 | MS.gene34094:intron | 25.0% |
| !! | TGGAATTTTATCTTATTACC+TGG | - | chr1.2:74530892-74530911 | MS.gene34094:intron | 25.0% |
| !! | TTCTTACTTTAACTGTTTTC+AGG | - | chr1.2:74530452-74530471 | MS.gene34094:intron | 25.0% |
| !!! | AAAGTGCTGTAAATATTACT+TGG | + | chr1.2:74531189-74531208 | None:intergenic | 25.0% |
| !!! | AGTATCCCAATAGTTATTTT+AGG | + | chr1.2:74533201-74533220 | None:intergenic | 25.0% |
| !!! | ATTTTAAAGAAGGCTGTTAT+TGG | - | chr1.2:74530346-74530365 | MS.gene34094:intron | 25.0% |
| !!! | CAAATTTGTACTTTTTGATC+TGG | - | chr1.2:74531896-74531915 | MS.gene34094:intron | 25.0% |
| !!! | CTGAAATGCTTGATAATTTT+TGG | - | chr1.2:74529628-74529647 | MS.gene34094:intron | 25.0% |
| !!! | GTTATTTTGTGATAGACAAT+AGG | - | chr1.2:74531129-74531148 | MS.gene34094:intron | 25.0% |
| !!! | TAAATTGAGCTTTATTGCTT+TGG | - | chr1.2:74529585-74529604 | MS.gene34094:intron | 25.0% |
| !!! | TGTAGGTTGAAAATAGTTTT+GGG | - | chr1.2:74530733-74530752 | MS.gene34094:intron | 25.0% |
| !!! | TTGACGAATTTATTGACTTA+TGG | - | chr1.2:74531000-74531019 | MS.gene34094:intron | 25.0% |
| !!! | TTGTAGGTTGAAAATAGTTT+TGG | - | chr1.2:74530732-74530751 | MS.gene34094:intron | 25.0% |
| !!! | TTTGTTTTGCTAAAAAACAG+AGG | + | chr1.2:74530154-74530173 | None:intergenic | 25.0% |
| AAAAGGAGTAACAAAAGGAA+AGG | + | chr1.2:74532715-74532734 | None:intergenic | 30.0% | |
| AAAGAATAAGAAAACCTTGC+AGG | + | chr1.2:74532399-74532418 | None:intergenic | 30.0% | |
| AAAGGAGTAACAAAAGGAAA+GGG | + | chr1.2:74532714-74532733 | None:intergenic | 30.0% | |
| AAGAAATGAATGGTTAGGTA+AGG | + | chr1.2:74530437-74530456 | None:intergenic | 30.0% | |
| AATGAGAAGCTTATTGTGTT+TGG | - | chr1.2:74532596-74532615 | MS.gene34094:intron | 30.0% | |
| ACATTTCTGATTTCGCTTAT+AGG | + | chr1.2:74531791-74531810 | None:intergenic | 30.0% | |
| AGATAACATGAAACTACAGA+AGG | + | chr1.2:74530567-74530586 | None:intergenic | 30.0% | |
| AGGATAAAAGGAGTAACAAA+AGG | + | chr1.2:74532720-74532739 | None:intergenic | 30.0% | |
| ATAACTGACATTCAAACAGT+TGG | + | chr1.2:74533033-74533052 | None:intergenic | 30.0% | |
| ATAAGCTTCTCATTTAGATC+TGG | + | chr1.2:74532590-74532609 | None:intergenic | 30.0% | |
| ATAGAAGGCCTTTAGATAAA+AGG | + | chr1.2:74530614-74530633 | None:intergenic | 30.0% | |
| CAGATGTCAAAATTAGTATG+GGG | + | chr1.2:74532956-74532975 | None:intergenic | 30.0% | |
| CTCAAACAACACATAATAGA+AGG | + | chr1.2:74530629-74530648 | None:intergenic | 30.0% | |
| GAAAAGATCAAATCCTTTGT+TGG | + | chr1.2:74532549-74532568 | None:intergenic | 30.0% | |
| GAAAATGAATTATAGCAGTG+TGG | + | chr1.2:74530806-74530825 | None:intergenic | 30.0% | |
| GAGTGATAGAGAGATAATAT+AGG | - | chr1.2:74529897-74529916 | MS.gene34094:intron | 30.0% | |
| GATAACATGAAACTACAGAA+GGG | + | chr1.2:74530566-74530585 | None:intergenic | 30.0% | |
| GCTAAAACAGAAAGGATAAA+AGG | + | chr1.2:74532732-74532751 | None:intergenic | 30.0% | |
| GGCTGAGAAGTAAAAAAAAA+AGG | + | chr1.2:74530545-74530564 | None:intergenic | 30.0% | |
| GTAGAAGTTCAATATTTGCT+AGG | - | chr1.2:74531151-74531170 | MS.gene34094:intron | 30.0% | |
| TAAATTGATGCCAAAAAACG+TGG | + | chr1.2:74532172-74532191 | None:intergenic | 30.0% | |
| TAATAATGAAGAAATAGGCC+AGG | + | chr1.2:74530913-74530932 | None:intergenic | 30.0% | |
| TACGAATAACAACTTCTGTT+TGG | - | chr1.2:74532113-74532132 | MS.gene34094:intron | 30.0% | |
| TAGAAGGCCTTTAGATAAAA+GGG | + | chr1.2:74530613-74530632 | None:intergenic | 30.0% | |
| TATCAGATATATGTAGAGCT+TGG | - | chr1.2:74531435-74531454 | MS.gene34094:intron | 30.0% | |
| TATTAAGCACTATGTGATTC+AGG | - | chr1.2:74532320-74532339 | MS.gene34094:intron | 30.0% | |
| TATTGATATGGAATATGGAG+AGG | + | chr1.2:74531311-74531330 | None:intergenic | 30.0% | |
| TCAGCTAAGATTATGGAAAA+AGG | + | chr1.2:74531216-74531235 | None:intergenic | 30.0% | |
| TGAGAGAGATCAATTGATAT+AGG | + | chr1.2:74529722-74529741 | None:intergenic | 30.0% | |
| TTAATATGGAAGCTGCTTAA+TGG | - | chr1.2:74531050-74531069 | MS.gene34094:intron | 30.0% | |
| ! | AAGTTGTTATTCGTATCAAG+CGG | + | chr1.2:74532108-74532127 | None:intergenic | 30.0% |
| ! | AGTTAATGCAGCAATTTTCA+AGG | + | chr1.2:74531583-74531602 | None:intergenic | 30.0% |
| ! | ATCTTGTTTCTTTGTTAGGT+TGG | - | chr1.2:74531348-74531367 | MS.gene34094:intron | 30.0% |
| ! | GATAAAAGGGAGTATACATT+AGG | + | chr1.2:74530600-74530619 | None:intergenic | 30.0% |
| ! | GCAAGGTTTTCTTATTCTTT+TGG | - | chr1.2:74532399-74532418 | MS.gene34094:intron | 30.0% |
| ! | GTATACTCCCTTTTATCTAA+AGG | - | chr1.2:74530603-74530622 | MS.gene34094:intron | 30.0% |
| ! | TTCTCATTTAGATCTGGAAT+CGG | + | chr1.2:74532584-74532603 | None:intergenic | 30.0% |
| ! | TTGCATAATTTTTCATGTGC+TGG | - | chr1.2:74532764-74532783 | MS.gene34094:intron | 30.0% |
| !! | AATCGTATTTTGTTGGCTAA+AGG | - | chr1.2:74529684-74529703 | MS.gene34094:intron | 30.0% |
| !! | ATTTGTACTTTTTGATCTGG+AGG | - | chr1.2:74531899-74531918 | MS.gene34094:intron | 30.0% |
| !! | CTCAGACAATTTACTTTTGT+AGG | - | chr1.2:74530716-74530735 | MS.gene34094:intron | 30.0% |
| !! | GTAGGTTGAAAATAGTTTTG+GGG | - | chr1.2:74530734-74530753 | MS.gene34094:intron | 30.0% |
| !! | GTTTGGTAATACAGCTTTTT+GGG | - | chr1.2:74532130-74532149 | MS.gene34094:intron | 30.0% |
| !! | TGTCTGAAATCGTATTTTGT+TGG | - | chr1.2:74529677-74529696 | MS.gene34094:intron | 30.0% |
| !! | TGTTTGGTAATACAGCTTTT+TGG | - | chr1.2:74532129-74532148 | MS.gene34094:intron | 30.0% |
| AATGTCTGTATGTAGCCAAA+AGG | + | chr1.2:74529439-74529458 | None:intergenic | 35.0% | |
| ACAACAAAGCAAAAGGAAGA+AGG | - | chr1.2:74529346-74529365 | MS.gene34094:CDS | 35.0% | |
| AGACAAATCATAGGTTAGGT+TGG | + | chr1.2:74532257-74532276 | None:intergenic | 35.0% | |
| ATAAATTCGTCAACAGCTTC+AGG | + | chr1.2:74530993-74531012 | None:intergenic | 35.0% | |
| ATAATCTGCTAGTGTTTGTG+TGG | + | chr1.2:74531534-74531553 | None:intergenic | 35.0% | |
| ATCTCAATCAAGTACAGATG+TGG | + | chr1.2:74531695-74531714 | None:intergenic | 35.0% | |
| ATGAAACTTACAGCATATCC+AGG | + | chr1.2:74530780-74530799 | None:intergenic | 35.0% | |
| ATGCTATTGCTATAGGATAG+AGG | - | chr1.2:74529652-74529671 | MS.gene34094:intron | 35.0% | |
| CAACAAAGCAAAAGGAAGAA+GGG | - | chr1.2:74529347-74529366 | MS.gene34094:CDS | 35.0% | |
| CACTAACATAGCAATTCTAC+TGG | + | chr1.2:74531956-74531975 | None:intergenic | 35.0% | |
| CTCTGTTACAACAAAGCAAA+AGG | - | chr1.2:74529339-74529358 | MS.gene34094:CDS | 35.0% | |
| GAATGCTTCATGTTTCATAC+TGG | + | chr1.2:74532498-74532517 | None:intergenic | 35.0% | |
| GACAAAAACTTGTCTCATCA+TGG | - | chr1.2:74530014-74530033 | MS.gene34094:CDS | 35.0% | |
| GAGTACTAGGATTATTAGTG+TGG | - | chr1.2:74531654-74531673 | MS.gene34094:intron | 35.0% | |
| GATTTGTCTGCAGTCAAAAA+GGG | - | chr1.2:74532268-74532287 | MS.gene34094:intron | 35.0% | |
| GTGAATCAAACACTCTCTAA+TGG | + | chr1.2:74529824-74529843 | None:intergenic | 35.0% | |
| TAAAAAACAGAGGACTGTAC+TGG | + | chr1.2:74530144-74530163 | None:intergenic | 35.0% | |
| TGGTTAACTGGACATGATAT+AGG | - | chr1.2:74531503-74531522 | MS.gene34094:intron | 35.0% | |
| TTAGTGAGGGACAAGAATTT+CGG | - | chr1.2:74530038-74530057 | MS.gene34094:CDS | 35.0% | |
| TTAGTGTGAGAAATGATACG+CGG | - | chr1.2:74529516-74529535 | MS.gene34094:intron | 35.0% | |
| TTCGACACCTTATATGACAA+AGG | + | chr1.2:74531626-74531645 | None:intergenic | 35.0% | |
| TTTGACTGCAGACAAATCAT+AGG | + | chr1.2:74532266-74532285 | None:intergenic | 35.0% | |
| ! | AAACATGAAGCATTCATGCT+TGG | - | chr1.2:74532503-74532522 | MS.gene34094:intron | 35.0% |
| ! | AAATAACTTGTCAGTCTCTG+AGG | - | chr1.2:74530492-74530511 | MS.gene34094:intron | 35.0% |
| ! | AGCATCGAGCTAATATCTAT+GGG | + | chr1.2:74531461-74531480 | None:intergenic | 35.0% |
| ! | CTTGGTTGGATTTTTCCTTT+TGG | - | chr1.2:74529421-74529440 | MS.gene34094:intron | 35.0% |
| ! | TGATTTGTCTGCAGTCAAAA+AGG | - | chr1.2:74532267-74532286 | MS.gene34094:intron | 35.0% |
| ! | TTTGGTTTATGCTCTAGTTC+TGG | - | chr1.2:74530202-74530221 | MS.gene34094:CDS | 35.0% |
| ! | TTTTGATCTGGAGGTTACTT+TGG | - | chr1.2:74531908-74531927 | MS.gene34094:intron | 35.0% |
| !! | AAGCATCGAGCTAATATCTA+TGG | + | chr1.2:74531462-74531481 | None:intergenic | 35.0% |
| !! | GTCATATAAGGTGTCGAATT+CGG | - | chr1.2:74531628-74531647 | MS.gene34094:intron | 35.0% |
| !! | TTTTGGCTACATACAGACAT+TGG | - | chr1.2:74529438-74529457 | MS.gene34094:intron | 35.0% |
| !!! | GTAAGTACTCCTGTCTTTTT+TGG | - | chr1.2:74529790-74529809 | MS.gene34094:intron | 35.0% |
| !!! | TGGTTTTTTACAGTCAATCC+TGG | - | chr1.2:74532419-74532438 | MS.gene34094:intron | 35.0% |
| !!! | TTTTGGGATGCTATTGCTAT+AGG | - | chr1.2:74529645-74529664 | MS.gene34094:intron | 35.0% |
| ATGGAACTAGACAAAACAGG+TGG | + | chr1.2:74530082-74530101 | None:intergenic | 40.0% | |
| ATGGAAGCTGCTTAATGGTT+TGG | - | chr1.2:74531055-74531074 | MS.gene34094:intron | 40.0% | |
| ATTCATGCTTGGAACATCCA+AGG | - | chr1.2:74532514-74532533 | MS.gene34094:intron | 40.0% | |
| ATTCCAGGAAATCGAAGAAG+TGG | - | chr1.2:74533155-74533174 | MS.gene34094:CDS | 40.0% | |
| CCTTCATGGCTAAAACAGAA+AGG | + | chr1.2:74532740-74532759 | None:intergenic | 40.0% | |
| CTACGCTTTGATTCTTGTCT+TGG | - | chr1.2:74529403-74529422 | MS.gene34094:intron | 40.0% | |
| CTGCAGACAAATCATAGGTT+AGG | + | chr1.2:74532261-74532280 | None:intergenic | 40.0% | |
| GCTTTGATTCTTGTCTTGGT+TGG | - | chr1.2:74529407-74529426 | MS.gene34094:intron | 40.0% | |
| GTCTCATCATGGTTTAGTGA+GGG | - | chr1.2:74530025-74530044 | MS.gene34094:CDS | 40.0% | |
| GTGACATCAGAACAAAGCTA+AGG | + | chr1.2:74530182-74530201 | None:intergenic | 40.0% | |
| GTTCTACCACCAAAAAAGAC+AGG | + | chr1.2:74529802-74529821 | None:intergenic | 40.0% | |
| TATCCACTTCTTCGATTTCC+TGG | + | chr1.2:74533161-74533180 | None:intergenic | 40.0% | |
| TATTCGTATCAAGCGGTTGT+TGG | + | chr1.2:74532101-74532120 | None:intergenic | 40.0% | |
| TGATGTGACTCTCAAACAGA+AGG | - | chr1.2:74533221-74533240 | MS.gene34094:CDS | 40.0% | |
| TGGAAGCTGCTTAATGGTTT+GGG | - | chr1.2:74531056-74531075 | MS.gene34094:intron | 40.0% | |
| TGTCTCATCATGGTTTAGTG+AGG | - | chr1.2:74530024-74530043 | MS.gene34094:CDS | 40.0% | |
| TTCATGCTTGGAACATCCAA+GGG | - | chr1.2:74532515-74532534 | MS.gene34094:intron | 40.0% | |
| TTGAGGTGGTAGAACCTTTA+GGG | - | chr1.2:74529747-74529766 | MS.gene34094:intron | 40.0% | |
| ! | AAAGGGAGTATACATTAGGC+AGG | + | chr1.2:74530596-74530615 | None:intergenic | 40.0% |
| ! | CATACAGACATTGGTCTAAC+AGG | - | chr1.2:74529447-74529466 | MS.gene34094:intron | 40.0% |
| ! | GCTTTGTTCTGATGTCACTT+TGG | - | chr1.2:74530184-74530203 | MS.gene34094:CDS | 40.0% |
| ! | GGTTTGGTTAGACTTGATGT+TGG | - | chr1.2:74531077-74531096 | MS.gene34094:intron | 40.0% |
| ! | TCGAATTCGGTTAGAGTACT+AGG | - | chr1.2:74531641-74531660 | MS.gene34094:intron | 40.0% |
| ! | TGATCTCTCTCAGTCTTTTG+AGG | - | chr1.2:74529730-74529749 | MS.gene34094:intron | 40.0% |
| ! | TGGAGTTGCTATTCTGTGAT+TGG | - | chr1.2:74532982-74533001 | MS.gene34094:intron | 40.0% |
| ! | TTTGAGGTGGTAGAACCTTT+AGG | - | chr1.2:74529746-74529765 | MS.gene34094:intron | 40.0% |
| !! | ACCTGTTTTGTCTAGTTCCA+TGG | - | chr1.2:74530081-74530100 | MS.gene34094:intron | 40.0% |
| !! | AGTCAAAAAGGGCACTTCAA+AGG | - | chr1.2:74532279-74532298 | MS.gene34094:intron | 40.0% |
| !! | CTGTGATTGGTTGACTTGTT+CGG | - | chr1.2:74532995-74533014 | MS.gene34094:intron | 40.0% |
| !! | GGCTGTTATTGGTTTGTAAC+AGG | - | chr1.2:74530357-74530376 | MS.gene34094:intron | 40.0% |
| !! | GTCAAAAAGGGCACTTCAAA+GGG | - | chr1.2:74532280-74532299 | MS.gene34094:intron | 40.0% |
| !! | TGGTAATACAGCTTTTTGGG+TGG | - | chr1.2:74532133-74532152 | MS.gene34094:intron | 40.0% |
| !! | TGTGATTGGTTGACTTGTTC+GGG | - | chr1.2:74532996-74533015 | MS.gene34094:intron | 40.0% |
| !! | TTTCATGTGCTGGCTGTTTA+TGG | - | chr1.2:74532774-74532793 | MS.gene34094:intron | 40.0% |
| !!! | AGTACTCCTGTCTTTTTTGG+TGG | - | chr1.2:74529793-74529812 | MS.gene34094:intron | 40.0% |
| !!! | CCTTTCTGTTTTAGCCATGA+AGG | - | chr1.2:74532737-74532756 | MS.gene34094:intron | 40.0% |
| !!! | GATGTTTCTGCCACGTTTTT+TGG | - | chr1.2:74532159-74532178 | MS.gene34094:intron | 40.0% |
| AAAGGAAGAAGGGACCTTCT+CGG | - | chr1.2:74529357-74529376 | MS.gene34094:CDS | 45.0% | |
| AAGCACTATGTGATTCAGGC+AGG | - | chr1.2:74532324-74532343 | MS.gene34094:intron | 45.0% | |
| AAGGGCAAACACACCAACAA+AGG | - | chr1.2:74532533-74532552 | MS.gene34094:intron | 45.0% | |
| ACTAGACAAAACAGGTGGCA+AGG | + | chr1.2:74530077-74530096 | None:intergenic | 45.0% | |
| AGCACTATGTGATTCAGGCA+GGG | - | chr1.2:74532325-74532344 | MS.gene34094:intron | 45.0% | |
| CAAGTACAGATGTGGTACAG+CGG | + | chr1.2:74531687-74531706 | None:intergenic | 45.0% | |
| CAGAAAGTCCTCGTCTCAAT+GGG | + | chr1.2:74530656-74530675 | None:intergenic | 45.0% | |
| CCTGAAATAAACACACCCTC+TGG | - | chr1.2:74532048-74532067 | MS.gene34094:intron | 45.0% | |
| CTAGACAAAACAGGTGGCAA+GGG | + | chr1.2:74530076-74530095 | None:intergenic | 45.0% | |
| GCAGCTGATTGGAACTTAAG+AGG | - | chr1.2:74532366-74532385 | MS.gene34094:intron | 45.0% | |
| GCCATGGAACTAGACAAAAC+AGG | + | chr1.2:74530085-74530104 | None:intergenic | 45.0% | |
| GTGAATCAAACGCTCCCTAA+AGG | + | chr1.2:74529764-74529783 | None:intergenic | 45.0% | |
| GTGTTTGGACAAGTCGTCAA+GGG | - | chr1.2:74532611-74532630 | MS.gene34094:intron | 45.0% | |
| TAAGAGGAAAGCAACCTGCA+AGG | - | chr1.2:74532382-74532401 | MS.gene34094:intron | 45.0% | |
| TCGAAGAAATCTGAGCTACC+TGG | - | chr1.2:74530759-74530778 | MS.gene34094:intron | 45.0% | |
| TGTGTTTGGACAAGTCGTCA+AGG | - | chr1.2:74532610-74532629 | MS.gene34094:intron | 45.0% | |
| TTTGTTGGTGTGTTTGCCCT+TGG | + | chr1.2:74532534-74532553 | None:intergenic | 45.0% | |
| ! | CCAGAGGGTGTGTTTATTTC+AGG | + | chr1.2:74532051-74532070 | None:intergenic | 45.0% |
| ! | CTTTGTTGTAACAGAGCCTG+AGG | + | chr1.2:74529335-74529354 | None:intergenic | 45.0% |
| ! | GCTCGATGCTTTAGTTTCTC+TGG | - | chr1.2:74531471-74531490 | MS.gene34094:intron | 45.0% |
| ! | GCTGCTTAATGGTTTGGGTT+TGG | - | chr1.2:74531061-74531080 | MS.gene34094:intron | 45.0% |
| ! | TAACTTGTCAGTCTCTGAGG+AGG | - | chr1.2:74530495-74530514 | MS.gene34094:intron | 45.0% |
| ! | TGAGTTTTCCCATTGAGACG+AGG | - | chr1.2:74530645-74530664 | MS.gene34094:intron | 45.0% |
| !! | AGTTTCTCTGGACTAGTGCA+TGG | - | chr1.2:74531483-74531502 | MS.gene34094:intron | 45.0% |
| !! | TCTCTCTCAGTCTTTTGAGG+TGG | - | chr1.2:74529733-74529752 | MS.gene34094:intron | 45.0% |
| !! | TGGACTAGTGCATGGTTAAC+TGG | - | chr1.2:74531491-74531510 | MS.gene34094:intron | 45.0% |
| !!! | GCTCTAGTTCTGGCAGATTT+TGG | - | chr1.2:74530212-74530231 | MS.gene34094:CDS | 45.0% |
| CAAAACAGGTGGCAAGGGAT+CGG | + | chr1.2:74530071-74530090 | None:intergenic | 50.0% | |
| CAACTCACTGGATCATCACC+AGG | + | chr1.2:74532440-74532459 | None:intergenic | 50.0% | |
| CAAGGGAGAGGATGTTGTTC+AGG | - | chr1.2:74532628-74532647 | MS.gene34094:intron | 50.0% | |
| GCACTATGTGATTCAGGCAG+GGG | - | chr1.2:74532326-74532345 | MS.gene34094:intron | 50.0% | |
| GCAGAAAGTCCTCGTCTCAA+TGG | + | chr1.2:74530657-74530676 | None:intergenic | 50.0% | |
| TATGTGATTCAGGCAGGGGA+TGG | - | chr1.2:74532330-74532349 | MS.gene34094:intron | 50.0% | |
| TGAGACGAGGACTTTCTGCA+AGG | - | chr1.2:74530658-74530677 | MS.gene34094:intron | 50.0% | |
| AAGGCACAGGAGCAGCTGAT+TGG | - | chr1.2:74532355-74532374 | MS.gene34094:intron | 55.0% | |
| ATTCAGGCAGGGGATGGTCA+AGG | - | chr1.2:74532336-74532355 | MS.gene34094:intron | 55.0% | |
| CCCACAAACAGTTGCGCTTG+CGG | + | chr1.2:74532077-74532096 | None:intergenic | 55.0% | |
| CCGCAAGCGCAACTGTTTGT+GGG | - | chr1.2:74532074-74532093 | MS.gene34094:intron | 55.0% | |
| CGCAAGCGCAACTGTTTGTG+GGG | - | chr1.2:74532075-74532094 | MS.gene34094:intron | 55.0% | |
| TCCGCAAGCGCAACTGTTTG+TGG | - | chr1.2:74532073-74532092 | MS.gene34094:intron | 55.0% | |
| TGGACAAGTCGTCAAGGGAG+AGG | - | chr1.2:74532616-74532635 | MS.gene34094:intron | 55.0% | |
| CTAGCCGCGCTAATCCGAGA+AGG | + | chr1.2:74529374-74529393 | None:intergenic | 60.0% | |
| TTGCGCTTGCGGACACCAGA+GGG | + | chr1.2:74532066-74532085 | None:intergenic | 60.0% | |
| !! | GGGACCTTCTCGGATTAGCG+CGG | - | chr1.2:74529367-74529386 | MS.gene34094:CDS | 60.0% |
| GCAGGGGATGGTCAAGGCAC+AGG | - | chr1.2:74532342-74532361 | MS.gene34094:intron | 65.0% | |
| GTTGCGCTTGCGGACACCAG+AGG | + | chr1.2:74532067-74532086 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 74529317 | 74533248 | 74529317 | ID=MS.gene34094 |
| chr1.2 | mRNA | 74529317 | 74533248 | 74529317 | ID=MS.gene34094.t1;Parent=MS.gene34094 |
| chr1.2 | exon | 74533097 | 74533248 | 74533097 | ID=MS.gene34094.t1.exon1;Parent=MS.gene34094.t1 |
| chr1.2 | CDS | 74533097 | 74533248 | 74533097 | ID=cds.MS.gene34094.t1;Parent=MS.gene34094.t1 |
| chr1.2 | exon | 74532049 | 74532091 | 74532049 | ID=MS.gene34094.t1.exon2;Parent=MS.gene34094.t1 |
| chr1.2 | CDS | 74532049 | 74532091 | 74532049 | ID=cds.MS.gene34094.t1;Parent=MS.gene34094.t1 |
| chr1.2 | exon | 74531777 | 74531827 | 74531777 | ID=MS.gene34094.t1.exon3;Parent=MS.gene34094.t1 |
| chr1.2 | CDS | 74531777 | 74531827 | 74531777 | ID=cds.MS.gene34094.t1;Parent=MS.gene34094.t1 |
| chr1.2 | exon | 74531544 | 74531629 | 74531544 | ID=MS.gene34094.t1.exon4;Parent=MS.gene34094.t1 |
| chr1.2 | CDS | 74531544 | 74531629 | 74531544 | ID=cds.MS.gene34094.t1;Parent=MS.gene34094.t1 |
| chr1.2 | exon | 74530162 | 74530284 | 74530162 | ID=MS.gene34094.t1.exon5;Parent=MS.gene34094.t1 |
| chr1.2 | CDS | 74530162 | 74530284 | 74530162 | ID=cds.MS.gene34094.t1;Parent=MS.gene34094.t1 |
| chr1.2 | exon | 74529916 | 74530066 | 74529916 | ID=MS.gene34094.t1.exon6;Parent=MS.gene34094.t1 |
| chr1.2 | CDS | 74529916 | 74530066 | 74529916 | ID=cds.MS.gene34094.t1;Parent=MS.gene34094.t1 |
| chr1.2 | exon | 74529317 | 74529403 | 74529317 | ID=MS.gene34094.t1.exon7;Parent=MS.gene34094.t1 |
| chr1.2 | CDS | 74529317 | 74529403 | 74529317 | ID=cds.MS.gene34094.t1;Parent=MS.gene34094.t1 |
| Gene Sequence |
| Protein sequence |
