Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34509.t1 | XP_003604146.2 | 98.8 | 678 | 8 | 0 | 1 | 678 | 87 | 764 | 0.00E+00 | 1269.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34509.t1 | Q9LTB0 | 75.8 | 678 | 156 | 5 | 1 | 677 | 81 | 751 | 6.5e-282 | 971.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34509.t1 | G7JVK6 | 98.8 | 678 | 8 | 0 | 1 | 678 | 87 | 764 | 0.0e+00 | 1269.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049193 | MS.gene34509 | 0.811744 | 6.01E-51 | -1.69E-46 |
| MS.gene050213 | MS.gene34509 | 0.822704 | 2.05E-53 | -1.69E-46 |
| MS.gene050646 | MS.gene34509 | 0.810279 | 1.25E-50 | -1.69E-46 |
| MS.gene050931 | MS.gene34509 | 0.815651 | 8.29E-52 | -1.69E-46 |
| MS.gene050945 | MS.gene34509 | 0.830656 | 2.60E-55 | -1.69E-46 |
| MS.gene051234 | MS.gene34509 | 0.818571 | 1.83E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene34509 | 0.811156 | 8.06E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene34509 | 0.818035 | 2.42E-52 | -1.69E-46 |
| MS.gene053143 | MS.gene34509 | 0.846662 | 1.89E-59 | -1.69E-46 |
| MS.gene053278 | MS.gene34509 | 0.834136 | 3.57E-56 | -1.69E-46 |
| MS.gene054004 | MS.gene34509 | 0.811385 | 7.19E-51 | -1.69E-46 |
| MS.gene054178 | MS.gene34509 | 0.833046 | 6.68E-56 | -1.69E-46 |
| MS.gene054585 | MS.gene34509 | 0.824238 | 9.00E-54 | -1.69E-46 |
| MS.gene057174 | MS.gene34509 | 0.825956 | 3.53E-54 | -1.69E-46 |
| MS.gene058095 | MS.gene34509 | 0.806711 | 7.20E-50 | -1.69E-46 |
| MS.gene059778 | MS.gene34509 | 0.866335 | 3.07E-65 | -1.69E-46 |
| MS.gene060522 | MS.gene34509 | 0.853534 | 2.24E-61 | -1.69E-46 |
| MS.gene060933 | MS.gene34509 | 0.812881 | 3.39E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene34509 | 0.808064 | 3.72E-50 | -1.69E-46 |
| MS.gene061100 | MS.gene34509 | 0.863142 | 3.07E-64 | -1.69E-46 |
| MS.gene061160 | MS.gene34509 | 0.830032 | 3.69E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 138 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAAGCTTTGAGGATTC+TGG | 0.189121 | 4.2:+93319758 | MS.gene34509:CDS |
| AACAGAAGCATTTGCTCTTC+TGG | 0.230386 | 4.2:+93318760 | MS.gene34509:CDS |
| AGTTGAGTTTCCTGATCTTT+TGG | 0.240158 | 4.2:+93318274 | MS.gene34509:CDS |
| AAACATATCTGCTGCTATAT+TGG | 0.247414 | 4.2:-93321360 | None:intergenic |
| CTCTCCCCGTTTATTTCCTT+TGG | 0.259208 | 4.2:-93323017 | None:intergenic |
| CCTTACAGGAATCTTGGTTT+AGG | 0.259751 | 4.2:-93319892 | None:intergenic |
| TCTTCTTCGTCCATTGATTC+TGG | 0.265720 | 4.2:-93319740 | None:intergenic |
| TTTCAGAAGATCAGAGCTTT+TGG | 0.266073 | 4.2:+93321447 | MS.gene34509:CDS |
| TCTACGGTTATCATCCTTAC+AGG | 0.270886 | 4.2:-93319906 | None:intergenic |
| CTCCTCCATTCCCGTTGTTC+AGG | 0.299705 | 4.2:-93319956 | None:intergenic |
| CTTACAGGAATCTTGGTTTA+GGG | 0.300947 | 4.2:-93319891 | None:intergenic |
| TGCCCATCGCTTCAATTTGA+TGG | 0.308622 | 4.2:+93319081 | MS.gene34509:CDS |
| TCGCTTCAATTTGATGGTTC+AGG | 0.316321 | 4.2:+93319087 | MS.gene34509:CDS |
| CTATGGCTGCTGCTGATGAT+TGG | 0.319105 | 4.2:+93318984 | MS.gene34509:CDS |
| GCTAGCTAATGCCTCATTAC+TGG | 0.329413 | 4.2:+93319829 | MS.gene34509:CDS |
| GAGGAAGGGCCAAGGCCTTT+AGG | 0.330967 | 4.2:+93321479 | MS.gene34509:CDS |
| TCATTAAACCATTCATCTTC+AGG | 0.346274 | 4.2:-93322957 | None:intergenic |
| GTTTAGGGAGGAGAGCTTCA+TGG | 0.358778 | 4.2:-93319876 | None:intergenic |
| AGCTGACATGTATATAAGTA+TGG | 0.372642 | 4.2:+93320075 | MS.gene34509:CDS |
| TAGCTAGCAGTGCAATCTGC+TGG | 0.380139 | 4.2:-93319814 | None:intergenic |
| TATCATCCTTACAGGAATCT+TGG | 0.382644 | 4.2:-93319898 | None:intergenic |
| AATTGCAAAACATACCTATA+CGG | 0.393334 | 4.2:-93322806 | None:intergenic |
| GAATTGTGAATGAAATTATC+AGG | 0.397966 | 4.2:+93322747 | MS.gene34509:CDS |
| CGGCCGTCAAACACCTCATA+TGG | 0.413368 | 4.2:+93318608 | MS.gene34509:CDS |
| TACTGCAGCTCTAGCACAAC+TGG | 0.415141 | 4.2:+93318640 | MS.gene34509:CDS |
| TATGGCTGCTGCTGATGATT+GGG | 0.419906 | 4.2:+93318985 | MS.gene34509:CDS |
| AGGTTGCTTGAGTGGATAGT+AGG | 0.422298 | 4.2:-93318127 | None:intergenic |
| CCAAGGCCTTTAGGTCCTCT+TGG | 0.424024 | 4.2:+93321488 | MS.gene34509:CDS |
| GGAAAACCAAAGGAAATAAA+CGG | 0.424170 | 4.2:+93323011 | MS.gene34509:CDS |
| AGTTCAGATCCACGGGTAGA+AGG | 0.425091 | 4.2:-93318479 | None:intergenic |
| AATCTGCTGGGCTTCAGTTT+CGG | 0.426706 | 4.2:-93319801 | None:intergenic |
| TGAAAGCTCACCTTCTAAAT+CGG | 0.432039 | 4.2:-93318093 | None:intergenic |
| GAAAACCAAAGGAAATAAAC+GGG | 0.435327 | 4.2:+93323012 | MS.gene34509:CDS |
| GCTTATACAGGACTTCTTTG+AGG | 0.435586 | 4.2:+93319619 | MS.gene34509:intron |
| AGCAACCTTGATACATGGTT+TGG | 0.436211 | 4.2:+93318142 | MS.gene34509:CDS |
| CATATCCTCCTAATGCTAAT+CGG | 0.438507 | 4.2:+93319014 | MS.gene34509:CDS |
| GCCTTTCTGTGGTTCTTCTA+CGG | 0.438652 | 4.2:-93319922 | None:intergenic |
| CATTTGCTCTTCTGGTGAAA+AGG | 0.441118 | 4.2:+93318768 | MS.gene34509:CDS |
| CCGGTCTGCCGATTAGCATT+AGG | 0.441791 | 4.2:-93319022 | None:intergenic |
| AAATCGTCATCCTGAACAAC+GGG | 0.443953 | 4.2:+93319946 | MS.gene34509:CDS |
| AAGGAGATATCCGATTTAGA+AGG | 0.455997 | 4.2:+93318083 | MS.gene34509:CDS |
| AGGTCCTCTTGGTCTACAAC+AGG | 0.457183 | 4.2:+93321499 | MS.gene34509:CDS |
| TGAAATATGTCAAGATGCTA+TGG | 0.457337 | 4.2:+93322977 | MS.gene34509:CDS |
| GACTCGTGGGTTCAGTTGAC+AGG | 0.457851 | 4.2:+93319981 | MS.gene34509:CDS |
| ACAAGCTGCAAGTGACTCAT+TGG | 0.462838 | 4.2:+93318679 | MS.gene34509:CDS |
| CCAAGAGGACCTAAAGGCCT+TGG | 0.469828 | 4.2:-93321488 | None:intergenic |
| ATAGCAGCAGATATGTTTGT+AGG | 0.476239 | 4.2:+93321365 | MS.gene34509:CDS |
| CAACAGGGATGGATCCGTAT+AGG | 0.477278 | 4.2:+93322792 | MS.gene34509:CDS |
| AAATATCAGACCTGGACAAA+TGG | 0.478669 | 4.2:+93318249 | MS.gene34509:CDS |
| GATGCTATGGAAAGATTAAG+TGG | 0.486477 | 4.2:+93322990 | MS.gene34509:CDS |
| AGCTAGCAGTGCAATCTGCT+GGG | 0.487168 | 4.2:-93319813 | None:intergenic |
| GCTTTGGCCGCTCTTGATGA+AGG | 0.487852 | 4.2:+93318329 | MS.gene34509:CDS |
| AAAAGCACTACCAGAATCAA+TGG | 0.488194 | 4.2:+93319730 | MS.gene34509:CDS |
| CCTCCATATGAGGTGTTTGA+CGG | 0.488508 | 4.2:-93318611 | None:intergenic |
| TTGATACATGGTTTGGCCGA+TGG | 0.489371 | 4.2:+93318149 | MS.gene34509:CDS |
| ACCTCTGCTTAGTATGCAGT+TGG | 0.491714 | 4.2:+93319649 | MS.gene34509:CDS |
| AGCAGATATGTTTGTAGGGA+GGG | 0.495602 | 4.2:+93321370 | MS.gene34509:CDS |
| ACAAGAGAGTACTGCTGCTA+TGG | 0.495618 | 4.2:+93318967 | MS.gene34509:CDS |
| TTCTAAATCGGATATCTCCT+TGG | 0.496112 | 4.2:-93318081 | None:intergenic |
| TGCAGAGACAGAAGTAAAGA+TGG | 0.497612 | 4.2:-93318395 | None:intergenic |
| AAGAGAACATCCAAAAGATC+AGG | 0.497714 | 4.2:-93318284 | None:intergenic |
| TTGGCTTCATCAGCAGCTGC+AGG | 0.498943 | 4.2:+93318797 | MS.gene34509:CDS |
| GGACGAAGAAGAAAGCTTTG+AGG | 0.502847 | 4.2:+93319751 | MS.gene34509:CDS |
| AAGGCGAGTAGAAGAAGCTT+TGG | 0.503692 | 4.2:+93318313 | MS.gene34509:CDS |
| AGTATATGCTCCTCCATATG+AGG | 0.506025 | 4.2:-93318621 | None:intergenic |
| TGGATGTTCTCTTGGCTGAA+AGG | 0.507358 | 4.2:+93318294 | MS.gene34509:CDS |
| GCAGTTGGGAGGACAAGCTC+TGG | 0.512635 | 4.2:+93319664 | MS.gene34509:CDS |
| TTTCATAAAACTGAACAGAA+TGG | 0.516066 | 4.2:+93321337 | MS.gene34509:CDS |
| GTCATCCTGAACAACGGGAA+TGG | 0.517673 | 4.2:+93319951 | MS.gene34509:CDS |
| TTGAAATGCTGTTGTACTAC+CGG | 0.521142 | 4.2:-93319041 | None:intergenic |
| GAAATGCGGATGAAGTTGAA+TGG | 0.522687 | 4.2:+93320101 | MS.gene34509:CDS |
| GAACCATCAAATTGAAGCGA+TGG | 0.527818 | 4.2:-93319084 | None:intergenic |
| GAGTGTGTTCAAATAGCATT+GGG | 0.528713 | 4.2:+93318839 | MS.gene34509:CDS |
| TCTGGTGAAAAGGCATGCAT+TGG | 0.529675 | 4.2:+93318778 | MS.gene34509:CDS |
| ATGTATCAAGGTTGCTTGAG+TGG | 0.531435 | 4.2:-93318135 | None:intergenic |
| CCTAAACCAAGATTCCTGTA+AGG | 0.532557 | 4.2:+93319892 | MS.gene34509:CDS |
| TTCTTCTGAACTTGTGATGT+GGG | 0.533142 | 4.2:+93318727 | MS.gene34509:CDS |
| TGACAAATACCGACCGTTGG+AGG | 0.534564 | 4.2:-93322711 | None:intergenic |
| CAGGACTTCTTTGAGGATGT+AGG | 0.541656 | 4.2:+93319626 | MS.gene34509:intron |
| ATTCTTCTGAACTTGTGATG+TGG | 0.543682 | 4.2:+93318726 | MS.gene34509:CDS |
| TAGCAGCAGATATGTTTGTA+GGG | 0.544112 | 4.2:+93321366 | MS.gene34509:CDS |
| ATCGGCCAAACCATGTATCA+AGG | 0.549441 | 4.2:-93318147 | None:intergenic |
| AGTATAACATGCAAAGTCTC+CGG | 0.553019 | 4.2:+93318588 | MS.gene34509:CDS |
| ACTCAAGCAACCTTGATACA+TGG | 0.553619 | 4.2:+93318137 | MS.gene34509:CDS |
| TAAATGTCATAGAACTTCCA+AGG | 0.554039 | 4.2:+93318064 | None:intergenic |
| AGTGGATAGTAGGTTTCTGA+TGG | 0.555242 | 4.2:-93318117 | None:intergenic |
| GACATGTATATAAGTATGGA+AGG | 0.560326 | 4.2:+93320079 | MS.gene34509:CDS |
| TGGAAACAAAATTGTACGAA+TGG | 0.565828 | 4.2:+93319778 | MS.gene34509:CDS |
| CATATGAGGTGTTTGACGGC+CGG | 0.569334 | 4.2:-93318607 | None:intergenic |
| AACCATCAAATTGAAGCGAT+GGG | 0.570523 | 4.2:-93319083 | None:intergenic |
| GGAGTGTGTTCAAATAGCAT+TGG | 0.572465 | 4.2:+93318838 | MS.gene34509:CDS |
| TGCACGAAGTTCAGATCCAC+GGG | 0.573946 | 4.2:-93318486 | None:intergenic |
| ATGATATTGAGGAAGGGCCA+AGG | 0.574464 | 4.2:+93321471 | MS.gene34509:CDS |
| CCTAATGCTAATCGGCAGAC+CGG | 0.576241 | 4.2:+93319022 | MS.gene34509:CDS |
| TTATCGATATCCGATTCTGA+TGG | 0.583099 | 4.2:+93318188 | MS.gene34509:CDS |
| TGTAGACCAAGAGGACCTAA+AGG | 0.584749 | 4.2:-93321494 | None:intergenic |
| GAGAGCTTCATGGCTGCGCG+TGG | 0.585405 | 4.2:-93319866 | None:intergenic |
| TCTAATGCTTGTTCAACACT+AGG | 0.587244 | 4.2:-93318926 | None:intergenic |
| TTGGGAGGACAAGCTCTGGA+AGG | 0.588760 | 4.2:+93319668 | MS.gene34509:CDS |
| CCTCTGCTTAGTATGCAGTT+GGG | 0.589651 | 4.2:+93319650 | MS.gene34509:CDS |
| GTGCAGAGACAGATGCAGTA+GGG | 0.590473 | 4.2:-93323052 | None:intergenic |
| GCTTGTCAGCCTTCTACCCG+TGG | 0.590728 | 4.2:+93318470 | MS.gene34509:CDS |
| TGTGAATGAAATTATCAGGA+AGG | 0.593693 | 4.2:+93322751 | MS.gene34509:CDS |
| ACAGGAATCTTGGTTTAGGG+AGG | 0.595294 | 4.2:-93319888 | None:intergenic |
| AAGATTAAGTGGAAAACCAA+AGG | 0.598349 | 4.2:+93323001 | MS.gene34509:CDS |
| TTTGGGATGATATTGAGGAA+GGG | 0.600436 | 4.2:+93321465 | MS.gene34509:CDS |
| TGGGAGGACAAGCTCTGGAA+GGG | 0.602271 | 4.2:+93319669 | MS.gene34509:CDS |
| CCTTGACAAATACCGACCGT+TGG | 0.602728 | 4.2:-93322714 | None:intergenic |
| ACCGTAGAAGAACCACAGAA+AGG | 0.603747 | 4.2:+93319921 | MS.gene34509:CDS |
| TGTGCAGAGACAGATGCAGT+AGG | 0.604544 | 4.2:-93323053 | None:intergenic |
| ATCCTGAACAACGGGAATGG+AGG | 0.608982 | 4.2:+93319954 | MS.gene34509:CDS |
| TATAAGTATGGAAGGAAATG+CGG | 0.609812 | 4.2:+93320087 | MS.gene34509:CDS |
| ATGCACGAAGTTCAGATCCA+CGG | 0.609989 | 4.2:-93318487 | None:intergenic |
| GTCTGCCGATTAGCATTAGG+AGG | 0.611723 | 4.2:-93319019 | None:intergenic |
| GTGATCTGCCTGAAGATGAA+TGG | 0.612166 | 4.2:+93322949 | MS.gene34509:intron |
| AAATCAGGCTCAAAGCATGT+TGG | 0.615504 | 4.2:-93320024 | None:intergenic |
| GGAATGGAGGAGACGACTCG+TGG | 0.616377 | 4.2:+93319967 | MS.gene34509:CDS |
| TAGTTCATCAGCCAGTAATG+AGG | 0.617154 | 4.2:-93319840 | None:intergenic |
| GCTTCATCAGCAGCTGCAGG+AGG | 0.617864 | 4.2:+93318800 | MS.gene34509:CDS |
| GCAGAGACAGAAGTAAAGAT+GGG | 0.618767 | 4.2:-93318394 | None:intergenic |
| CAGCAGATATGTTTGTAGGG+AGG | 0.620591 | 4.2:+93321369 | MS.gene34509:CDS |
| ACTCAACTAACCATTTGTCC+AGG | 0.622338 | 4.2:-93318259 | None:intergenic |
| TGCTCATTATTAGAAGCTCG+TGG | 0.624438 | 4.2:+93318866 | MS.gene34509:CDS |
| TGAATCGATGTGAACTCCAT+CGG | 0.624805 | 4.2:-93318165 | None:intergenic |
| CCAACGGTCGGTATTTGTCA+AGG | 0.628869 | 4.2:+93322714 | MS.gene34509:CDS |
| ACATAAAGAAATATCAGACC+TGG | 0.635904 | 4.2:+93318241 | MS.gene34509:CDS |
| AGTAGCAAGCTGTGAGCATG+CGG | 0.636005 | 4.2:-93318542 | None:intergenic |
| CCGTCAAACACCTCATATGG+AGG | 0.647577 | 4.2:+93318611 | MS.gene34509:CDS |
| CCCAACTGCATACTAAGCAG+AGG | 0.650328 | 4.2:-93319650 | None:intergenic |
| AAAATCGTCATCCTGAACAA+CGG | 0.651815 | 4.2:+93319945 | MS.gene34509:CDS |
| AGGAGGTTTAAGAGCTGCTG+CGG | 0.658917 | 4.2:+93318817 | MS.gene34509:CDS |
| CATACCTGTTGTAGACCAAG+AGG | 0.660216 | 4.2:-93321503 | None:intergenic |
| GAATGGAGGAGACGACTCGT+GGG | 0.664709 | 4.2:+93319968 | MS.gene34509:CDS |
| ACGTTCTCCTTCATCAAGAG+CGG | 0.665530 | 4.2:-93318336 | None:intergenic |
| ACAAGTTCAGAAGAATACGC+TGG | 0.693012 | 4.2:-93318719 | None:intergenic |
| CTGCTTAGTATGCAGTTGGG+AGG | 0.693555 | 4.2:+93319653 | MS.gene34509:CDS |
| AAAACCAAAGGAAATAAACG+GGG | 0.769107 | 4.2:+93323013 | MS.gene34509:CDS |
| AGAATTCTATTACCGAACGT+AGG | 0.770772 | 4.2:+93318417 | MS.gene34509:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATT+AGG | - | chr4.2:93320734-93320715 | None:intergenic | 0.0% |
| !!! | TTAATATAAATAATTTTAAA+TGG | - | chr4.2:93322189-93322208 | None:intergenic | 0.0% |
| !! | AACGTTAAAAAAAAATTATA+TGG | - | chr4.2:93322651-93322670 | None:intergenic | 10.0% |
| !! | TAAATATTATAACAAATACA+AGG | - | chr4.2:93322486-93322505 | None:intergenic | 10.0% |
| !! | ATATAATAAACCACAAAAAT+TGG | - | chr4.2:93320576-93320595 | None:intergenic | 15.0% |
| !! | TAAGTTATTAAGATATTCAA+AGG | - | chr4.2:93321168-93321187 | None:intergenic | 15.0% |
| !! | TCTACAATTAGAAATATATA+TGG | - | chr4.2:93320464-93320483 | None:intergenic | 15.0% |
| !! | TTATTAACATTAGCTATAAT+GGG | + | chr4.2:93322076-93322095 | MS.gene34509:intron | 15.0% |
| !! | TTGAATATCTTAATAACTTA+TGG | + | chr4.2:93321168-93321187 | MS.gene34509:intron | 15.0% |
| !!! | CAAATTGGATAATTTTATTT+GGG | + | chr4.2:93321624-93321643 | MS.gene34509:intron | 15.0% |
| !!! | TGTTGATTTTTAAAAATTAC+AGG | + | chr4.2:93320411-93320430 | MS.gene34509:intron | 15.0% |
| !!! | TTTTTAAAAATTACAGGATT+AGG | + | chr4.2:93320417-93320436 | MS.gene34509:intron | 15.0% |
| !! | AAGAACTCAAGTTTATTATT+GGG | - | chr4.2:93321878-93321897 | None:intergenic | 20.0% |
| !! | AGTATCAATTTAAGAAATCA+AGG | - | chr4.2:93322046-93322065 | None:intergenic | 20.0% |
| !! | CAAAAGAAATATTACTCATT+GGG | + | chr4.2:93320785-93320804 | MS.gene34509:intron | 20.0% |
| !! | GACAAAATAAAAAGATGAAA+AGG | - | chr4.2:93319410-93319429 | None:intergenic | 20.0% |
| !! | TAAAACATAGTTAGCATTTA+TGG | - | chr4.2:93321111-93321130 | None:intergenic | 20.0% |
| !!! | AAACAATTTTCAGTTAGTTT+TGG | + | chr4.2:93321552-93321571 | MS.gene34509:intron | 20.0% |
| !!! | ACAAATTTTCTTATAAGTTG+TGG | - | chr4.2:93322463-93322482 | None:intergenic | 20.0% |
| !!! | ATTATCCAATTTGCTTATAA+AGG | - | chr4.2:93321617-93321636 | None:intergenic | 20.0% |
| !!! | ATTTGTGAAATTGGTAATTA+AGG | + | chr4.2:93320526-93320545 | MS.gene34509:intron | 20.0% |
| !!! | ATTTTCAATTTACTTTAAGC+TGG | + | chr4.2:93319585-93319604 | MS.gene34509:intron | 20.0% |
| !!! | CAATTACATGTTTTAATCAA+AGG | + | chr4.2:93322008-93322027 | MS.gene34509:intron | 20.0% |
| !!! | GCAAATTGGATAATTTTATT+TGG | + | chr4.2:93321623-93321642 | MS.gene34509:intron | 20.0% |
| !!! | GGTAACTGTTTTTTTTTTAA+TGG | - | chr4.2:93319240-93319259 | None:intergenic | 20.0% |
| !!! | TTTTCAATTTACTTTAAGCT+GGG | + | chr4.2:93319586-93319605 | MS.gene34509:intron | 20.0% |
| !!! | TTTTTGGAAATTTGTGAAAT+TGG | + | chr4.2:93320517-93320536 | MS.gene34509:intron | 20.0% |
| ! | AAAAAACCACAAACTACATA+AGG | - | chr4.2:93319565-93319584 | None:intergenic | 25.0% |
| ! | AAAAACCACAAACTACATAA+GGG | - | chr4.2:93319564-93319583 | None:intergenic | 25.0% |
| ! | AAAATTCACATTGCAAATCA+AGG | - | chr4.2:93319261-93319280 | None:intergenic | 25.0% |
| ! | AATTGCAAAACATACCTATA+CGG | - | chr4.2:93322809-93322828 | None:intergenic | 25.0% |
| ! | ATCATAGACTAATAGACTAA+AGG | - | chr4.2:93319362-93319381 | None:intergenic | 25.0% |
| ! | ATGCAATTGAAATTTGATCA+TGG | + | chr4.2:93321523-93321542 | MS.gene34509:intron | 25.0% |
| ! | ATTAAAACATGTAATTGACG+AGG | - | chr4.2:93322005-93322024 | None:intergenic | 25.0% |
| ! | CAAGAACTCAAGTTTATTAT+TGG | - | chr4.2:93321879-93321898 | None:intergenic | 25.0% |
| ! | CAATTTATTATTTCCTTCTG+TGG | - | chr4.2:93320830-93320849 | None:intergenic | 25.0% |
| ! | CCAAAAGAAATATTACTCAT+TGG | + | chr4.2:93320784-93320803 | MS.gene34509:intron | 25.0% |
| ! | GAATTGTGAATGAAATTATC+AGG | + | chr4.2:93322747-93322766 | MS.gene34509:CDS | 25.0% |
| ! | TAATAACTTATGGAACATGT+TGG | + | chr4.2:93321178-93321197 | MS.gene34509:intron | 25.0% |
| ! | TAATTGTGTGAAAAAACAGA+TGG | + | chr4.2:93319305-93319324 | MS.gene34509:intron | 25.0% |
| ! | TATACCTGAAAAATCAAAGA+CGG | - | chr4.2:93320130-93320149 | None:intergenic | 25.0% |
| ! | TATGACATAGAATGATGTTT+GGG | + | chr4.2:93319141-93319160 | MS.gene34509:intron | 25.0% |
| ! | TATTATTCTGTTTAAACCAC+TGG | - | chr4.2:93321720-93321739 | None:intergenic | 25.0% |
| ! | TATTTACATGCCTTAAACTT+TGG | - | chr4.2:93321822-93321841 | None:intergenic | 25.0% |
| ! | TCAATTTAAGAAATCAAGGA+TGG | - | chr4.2:93322042-93322061 | None:intergenic | 25.0% |
| ! | TGATTCCTTTATAAGCAAAT+TGG | + | chr4.2:93321609-93321628 | MS.gene34509:intron | 25.0% |
| ! | TTATGACATAGAATGATGTT+TGG | + | chr4.2:93319140-93319159 | MS.gene34509:intron | 25.0% |
| ! | TTTCATAAAACTGAACAGAA+TGG | + | chr4.2:93321337-93321356 | MS.gene34509:CDS | 25.0% |
| !! | AAATCTTCAAAACTGATTCA+TGG | - | chr4.2:93320182-93320201 | None:intergenic | 25.0% |
| !! | AAGTGTTAAATTTAAAACCC+AGG | - | chr4.2:93320159-93320178 | None:intergenic | 25.0% |
| !! | ACAACTTTTTACATCTTAGT+GGG | + | chr4.2:93321031-93321050 | MS.gene34509:intron | 25.0% |
| !! | CCAATGAGTAATATTTCTTT+TGG | - | chr4.2:93320787-93320806 | None:intergenic | 25.0% |
| !! | CTAAAAAGTTTCAAAAGTAC+AGG | - | chr4.2:93318905-93318924 | None:intergenic | 25.0% |
| !! | TATTTCTTTTGGTAGATGAA+TGG | - | chr4.2:93320776-93320795 | None:intergenic | 25.0% |
| !! | TTAAACTCTGCATTTTATCA+AGG | - | chr4.2:93320980-93320999 | None:intergenic | 25.0% |
| !! | TTTTTGTTGAGTTTTACATG+CGG | + | chr4.2:93320913-93320932 | MS.gene34509:intron | 25.0% |
| !!! | CAGCTGCATTATTTTAATAT+TGG | + | chr4.2:93319507-93319526 | MS.gene34509:intron | 25.0% |
| !!! | CTTTGATTTTTCAGGTATAA+TGG | + | chr4.2:93320131-93320150 | MS.gene34509:intron | 25.0% |
| !!! | GGTATTTTTTATGCTTATAC+AGG | + | chr4.2:93319607-93319626 | MS.gene34509:intron | 25.0% |
| !!! | TTACAGAAACTGTTATTTTG+TGG | + | chr4.2:93321423-93321442 | MS.gene34509:CDS | 25.0% |
| AAAAAAGTTGACGTGTAACT+AGG | - | chr4.2:93320863-93320882 | None:intergenic | 30.0% | |
| AAAACCAAAGGAAATAAACG+GGG | + | chr4.2:93323013-93323032 | MS.gene34509:CDS | 30.0% | |
| AAACATATCTGCTGCTATAT+TGG | - | chr4.2:93321363-93321382 | None:intergenic | 30.0% | |
| AAATGCAGATAGAATGTTGA+TGG | - | chr4.2:93322851-93322870 | None:intergenic | 30.0% | |
| AAGATTAAGTGGAAAACCAA+AGG | + | chr4.2:93323001-93323020 | MS.gene34509:CDS | 30.0% | |
| ACATAAAGAAATATCAGACC+TGG | + | chr4.2:93318241-93318260 | MS.gene34509:CDS | 30.0% | |
| AGACTGTTATGTTATTATCC+AGG | + | chr4.2:93321310-93321329 | MS.gene34509:intron | 30.0% | |
| AGCTGACATGTATATAAGTA+TGG | + | chr4.2:93320075-93320094 | MS.gene34509:CDS | 30.0% | |
| AGTTGAAGCATAAACAGAAA+CGG | - | chr4.2:93321272-93321291 | None:intergenic | 30.0% | |
| ATAGACTAATAGACTAAAGG+TGG | - | chr4.2:93319359-93319378 | None:intergenic | 30.0% | |
| ATGTAAAAAGTTGTCTACCT+AGG | - | chr4.2:93321025-93321044 | None:intergenic | 30.0% | |
| CCAAACTAAACCAAAGTTTA+AGG | + | chr4.2:93321809-93321828 | MS.gene34509:intron | 30.0% | |
| GAAAACCAAAGGAAATAAAC+GGG | + | chr4.2:93323012-93323031 | MS.gene34509:CDS | 30.0% | |
| GACATGTATATAAGTATGGA+AGG | + | chr4.2:93320079-93320098 | MS.gene34509:CDS | 30.0% | |
| GCAGAAAATTGAAACTCTTA+CGG | + | chr4.2:93320602-93320621 | MS.gene34509:intron | 30.0% | |
| GCATTTCACATGTATTTATC+TGG | - | chr4.2:93322235-93322254 | None:intergenic | 30.0% | |
| GGAAAACCAAAGGAAATAAA+CGG | + | chr4.2:93323011-93323030 | MS.gene34509:CDS | 30.0% | |
| GGGCACATTTATTTACTTAT+TGG | + | chr4.2:93322400-93322419 | MS.gene34509:intron | 30.0% | |
| GTCCTTTCAAAAACACTTTA+GGG | + | chr4.2:93322380-93322399 | MS.gene34509:intron | 30.0% | |
| TAAACAAGATGTTTCGAAGT+TGG | - | chr4.2:93322147-93322166 | None:intergenic | 30.0% | |
| TAAATACATGTGAAATGCAC+AGG | + | chr4.2:93322237-93322256 | MS.gene34509:intron | 30.0% | |
| TACAGAAAAACCATCAGAAT+CGG | - | chr4.2:93318201-93318220 | None:intergenic | 30.0% | |
| TATAAGTATGGAAGGAAATG+CGG | + | chr4.2:93320087-93320106 | MS.gene34509:CDS | 30.0% | |
| TCATTAAACCATTCATCTTC+AGG | - | chr4.2:93322960-93322979 | None:intergenic | 30.0% | |
| TGAAATATGTCAAGATGCTA+TGG | + | chr4.2:93322977-93322996 | MS.gene34509:CDS | 30.0% | |
| TGGAAACAAAATTGTACGAA+TGG | + | chr4.2:93319778-93319797 | MS.gene34509:CDS | 30.0% | |
| TGTAAAAAGTTGTCTACCTA+GGG | - | chr4.2:93321024-93321043 | None:intergenic | 30.0% | |
| TGTGAATGAAATTATCAGGA+AGG | + | chr4.2:93322751-93322770 | MS.gene34509:CDS | 30.0% | |
| TTTCAGCCCTTAAAAAACTT+GGG | + | chr4.2:93318513-93318532 | MS.gene34509:CDS | 30.0% | |
| ! | AATACTAACCTTTTGGATTC+TGG | + | chr4.2:93322355-93322374 | MS.gene34509:intron | 30.0% |
| ! | AATCTGATTCTGTAGTCTTA+TGG | + | chr4.2:93320387-93320406 | MS.gene34509:intron | 30.0% |
| ! | ATTCTAAAGAGCAATACATG+CGG | - | chr4.2:93322533-93322552 | None:intergenic | 30.0% |
| ! | CCTTAAACTTTGGTTTAGTT+TGG | - | chr4.2:93321812-93321831 | None:intergenic | 30.0% |
| ! | GACAACTTTTTACATCTTAG+TGG | + | chr4.2:93321030-93321049 | MS.gene34509:intron | 30.0% |
| ! | GTCAATCAATACTAACCTTT+TGG | + | chr4.2:93322348-93322367 | MS.gene34509:intron | 30.0% |
| ! | TCTGATGGTTTTTCTGTAAA+TGG | + | chr4.2:93318203-93318222 | MS.gene34509:CDS | 30.0% |
| ! | TTTTGTTGAGTTTTACATGC+GGG | + | chr4.2:93320914-93320933 | MS.gene34509:intron | 30.0% |
| ! | TTTTTCTGTAAATGGTACAC+TGG | + | chr4.2:93318211-93318230 | MS.gene34509:CDS | 30.0% |
| !! | CTAAAGTGTTTTTGAAAGGA+CGG | - | chr4.2:93322381-93322400 | None:intergenic | 30.0% |
| !! | GGATTCTGAGAATATTTTCT+TGG | + | chr4.2:93320547-93320566 | MS.gene34509:intron | 30.0% |
| !! | TATCTATCTCCTGGTTTTTA+TGG | + | chr4.2:93320942-93320961 | MS.gene34509:intron | 30.0% |
| !! | TGAGTAGTTGTTCTAAAACT+AGG | + | chr4.2:93319200-93319219 | MS.gene34509:intron | 30.0% |
| !! | TTCTTGGTAACCAATTTTTG+TGG | + | chr4.2:93320563-93320582 | MS.gene34509:intron | 30.0% |
| !! | TTGTGGAGAATTTTCTGAAA+TGG | - | chr4.2:93322446-93322465 | None:intergenic | 30.0% |
| !!! | TAACGTTGTGCAGTTTTATT+TGG | + | chr4.2:93322664-93322683 | MS.gene34509:intron | 30.0% |
| !!! | TCGAATGTTGGCTAATTTTT+TGG | + | chr4.2:93320501-93320520 | MS.gene34509:intron | 30.0% |
| !!! | TGTGGAGAATTTTCTGAAAT+GGG | - | chr4.2:93322445-93322464 | None:intergenic | 30.0% |
| AAAATCGTCATCCTGAACAA+CGG | + | chr4.2:93319945-93319964 | MS.gene34509:CDS | 35.0% | |
| AAATATCAGACCTGGACAAA+TGG | + | chr4.2:93318249-93318268 | MS.gene34509:CDS | 35.0% | |
| AACCATCAAATTGAAGCGAT+GGG | - | chr4.2:93319086-93319105 | None:intergenic | 35.0% | |
| AAGAAACTTAGCTGTGTATG+TGG | - | chr4.2:93321935-93321954 | None:intergenic | 35.0% | |
| AAGACTACAGAATCAGATTC+TGG | - | chr4.2:93320386-93320405 | None:intergenic | 35.0% | |
| AAGAGAACATCCAAAAGATC+AGG | - | chr4.2:93318287-93318306 | None:intergenic | 35.0% | |
| AAGGAGATATCCGATTTAGA+AGG | + | chr4.2:93318083-93318102 | MS.gene34509:CDS | 35.0% | |
| AGAATTCTATTACCGAACGT+AGG | + | chr4.2:93318417-93318436 | MS.gene34509:CDS | 35.0% | |
| AGTATAACATGCAAAGTCTC+CGG | + | chr4.2:93318588-93318607 | MS.gene34509:CDS | 35.0% | |
| AGTTTGCGTCTATTGATCTT+CGG | - | chr4.2:93322589-93322608 | None:intergenic | 35.0% | |
| ATAGCAGCAGATATGTTTGT+AGG | + | chr4.2:93321365-93321384 | MS.gene34509:CDS | 35.0% | |
| ATTCTTCTGAACTTGTGATG+TGG | + | chr4.2:93318726-93318745 | MS.gene34509:CDS | 35.0% | |
| ATTGTTTCCATTGGAAGTTG+TGG | + | chr4.2:93322874-93322893 | MS.gene34509:intron | 35.0% | |
| CATATCCTCCTAATGCTAAT+CGG | + | chr4.2:93319014-93319033 | MS.gene34509:CDS | 35.0% | |
| CGTCCTTTCAAAAACACTTT+AGG | + | chr4.2:93322379-93322398 | MS.gene34509:intron | 35.0% | |
| CTGAAACACTGATACCTAAT+AGG | + | chr4.2:93321578-93321597 | MS.gene34509:intron | 35.0% | |
| CTTACAGGAATCTTGGTTTA+GGG | - | chr4.2:93319894-93319913 | None:intergenic | 35.0% | |
| GAATCAATTCGTGTCCTATT+AGG | - | chr4.2:93321595-93321614 | None:intergenic | 35.0% | |
| GAGTGTGTTCAAATAGCATT+GGG | + | chr4.2:93318839-93318858 | MS.gene34509:CDS | 35.0% | |
| GATATGTGTAACGAGGAAAA+AGG | + | chr4.2:93320359-93320378 | MS.gene34509:intron | 35.0% | |
| GATGCTATGGAAAGATTAAG+TGG | + | chr4.2:93322990-93323009 | MS.gene34509:CDS | 35.0% | |
| GCATTTGCAATTGTTTCCAT+TGG | + | chr4.2:93322865-93322884 | MS.gene34509:intron | 35.0% | |
| GTTTCAGCCCTTAAAAAACT+TGG | + | chr4.2:93318512-93318531 | MS.gene34509:CDS | 35.0% | |
| TAGCAGCAGATATGTTTGTA+GGG | + | chr4.2:93321366-93321385 | MS.gene34509:CDS | 35.0% | |
| TATCATCCTTACAGGAATCT+TGG | - | chr4.2:93319901-93319920 | None:intergenic | 35.0% | |
| TATTCCACTCCATAAAAACC+AGG | - | chr4.2:93320954-93320973 | None:intergenic | 35.0% | |
| TCGATGAAGAATGAACAAGA+AGG | - | chr4.2:93320218-93320237 | None:intergenic | 35.0% | |
| TCTAATGCTTGTTCAACACT+AGG | - | chr4.2:93318929-93318948 | None:intergenic | 35.0% | |
| TGAAAGCTCACCTTCTAAAT+CGG | - | chr4.2:93318096-93318115 | None:intergenic | 35.0% | |
| TGTTCATTGTATCAAGCACA+TGG | + | chr4.2:93322317-93322336 | MS.gene34509:intron | 35.0% | |
| TTATCGATATCCGATTCTGA+TGG | + | chr4.2:93318188-93318207 | MS.gene34509:CDS | 35.0% | |
| TTCAGCCCTTAAAAAACTTG+GGG | + | chr4.2:93318514-93318533 | MS.gene34509:CDS | 35.0% | |
| TTCTAAATCGGATATCTCCT+TGG | - | chr4.2:93318084-93318103 | None:intergenic | 35.0% | |
| TTCTTCTGAACTTGTGATGT+GGG | + | chr4.2:93318727-93318746 | MS.gene34509:CDS | 35.0% | |
| TTGAAATGCTGTTGTACTAC+CGG | - | chr4.2:93319044-93319063 | None:intergenic | 35.0% | |
| TTTGGATACTCTGCATTCTT+CGG | - | chr4.2:93321794-93321813 | None:intergenic | 35.0% | |
| ! | AGCTAATTTTTGCCTACGTT+CGG | - | chr4.2:93318432-93318451 | None:intergenic | 35.0% |
| ! | AGTTGAGTTTCCTGATCTTT+TGG | + | chr4.2:93318274-93318293 | MS.gene34509:CDS | 35.0% |
| ! | TGATCTTTTGGATGTTCTCT+TGG | + | chr4.2:93318286-93318305 | MS.gene34509:CDS | 35.0% |
| ! | TGTTTAAACCACTGGTTGTT+AGG | - | chr4.2:93321712-93321731 | None:intergenic | 35.0% |
| ! | TTCAGAAGATCAGAGCTTTT+GGG | + | chr4.2:93321448-93321467 | MS.gene34509:CDS | 35.0% |
| ! | TTTCAGAAGATCAGAGCTTT+TGG | + | chr4.2:93321447-93321466 | MS.gene34509:CDS | 35.0% |
| ! | TTTCAGGTATAATGGAACCT+GGG | + | chr4.2:93320139-93320158 | MS.gene34509:intron | 35.0% |
| ! | TTTGAGCCTGATTTTTACAG+AGG | + | chr4.2:93320033-93320052 | MS.gene34509:CDS | 35.0% |
| ! | TTTGGGATGATATTGAGGAA+GGG | + | chr4.2:93321465-93321484 | MS.gene34509:CDS | 35.0% |
| ! | TTTGTTGAGTTTTACATGCG+GGG | + | chr4.2:93320915-93320934 | MS.gene34509:intron | 35.0% |
| !! | AAAAGCACTACCAGAATCAA+TGG | + | chr4.2:93319730-93319749 | MS.gene34509:CDS | 35.0% |
| !! | AGAATGTTGATGGTGAAACA+TGG | - | chr4.2:93322841-93322860 | None:intergenic | 35.0% |
| !! | AGTGACTCATTGGCTATTTT+TGG | + | chr4.2:93318689-93318708 | MS.gene34509:CDS | 35.0% |
| !! | GATTCCGTCTTTGATTTTTC+AGG | + | chr4.2:93320123-93320142 | MS.gene34509:CDS | 35.0% |
| !! | TCAGTTTTATGAAAAGCTCC+TGG | - | chr4.2:93321331-93321350 | None:intergenic | 35.0% |
| !! | TGCCCTAAAGTGTTTTTGAA+AGG | - | chr4.2:93322385-93322404 | None:intergenic | 35.0% |
| !!! | ACCATCCCCAAGTTTTTTAA+GGG | - | chr4.2:93318522-93318541 | None:intergenic | 35.0% |
| !!! | GAATTTTCTGAAATGGGTGT+TGG | - | chr4.2:93322439-93322458 | None:intergenic | 35.0% |
| !!! | TCAGGTGAGACTTTTAGTTT+TGG | + | chr4.2:93319105-93319124 | MS.gene34509:intron | 35.0% |
| !!! | TTTTACATCTTAGTGGGTTC+AGG | + | chr4.2:93321037-93321056 | MS.gene34509:intron | 35.0% |
| !!! | TTTTCAGGTATAATGGAACC+TGG | + | chr4.2:93320138-93320157 | MS.gene34509:intron | 35.0% |
| !!! | TTTTGGGATGATATTGAGGA+AGG | + | chr4.2:93321464-93321483 | MS.gene34509:CDS | 35.0% |
| AAATCAGGCTCAAAGCATGT+TGG | - | chr4.2:93320027-93320046 | None:intergenic | 40.0% | |
| AAATCGTCATCCTGAACAAC+GGG | + | chr4.2:93319946-93319965 | MS.gene34509:CDS | 40.0% | |
| AACATTCGAAACTGTGGACA+AGG | - | chr4.2:93320490-93320509 | None:intergenic | 40.0% | |
| AACTACTCACATTGTCCCAA+CGG | - | chr4.2:93319189-93319208 | None:intergenic | 40.0% | |
| AATAGTGATATAGCAGCCGT+TGG | + | chr4.2:93319170-93319189 | MS.gene34509:intron | 40.0% | |
| ACAAGTTCAGAAGAATACGC+TGG | - | chr4.2:93318722-93318741 | None:intergenic | 40.0% | |
| ACACTTCTCATGCATAACAC+TGG | - | chr4.2:93320269-93320288 | None:intergenic | 40.0% | |
| ACTCAACTAACCATTTGTCC+AGG | - | chr4.2:93318262-93318281 | None:intergenic | 40.0% | |
| ACTCAAGCAACCTTGATACA+TGG | + | chr4.2:93318137-93318156 | MS.gene34509:CDS | 40.0% | |
| AGCAACCTTGATACATGGTT+TGG | + | chr4.2:93318142-93318161 | MS.gene34509:CDS | 40.0% | |
| AGCAATACATGCGGTTATGT+TGG | - | chr4.2:93322524-93322543 | None:intergenic | 40.0% | |
| AGCAGATATGTTTGTAGGGA+GGG | + | chr4.2:93321370-93321389 | MS.gene34509:CDS | 40.0% | |
| AGTATATGCTCCTCCATATG+AGG | - | chr4.2:93318624-93318643 | None:intergenic | 40.0% | |
| AGTGGATAGTAGGTTTCTGA+TGG | - | chr4.2:93318120-93318139 | None:intergenic | 40.0% | |
| ATAGTGATATAGCAGCCGTT+GGG | + | chr4.2:93319171-93319190 | MS.gene34509:intron | 40.0% | |
| ATGTATCAAGGTTGCTTGAG+TGG | - | chr4.2:93318138-93318157 | None:intergenic | 40.0% | |
| ATTTCCTTCTGTGGACAAAG+AGG | - | chr4.2:93320821-93320840 | None:intergenic | 40.0% | |
| CAAACTACATAAGGGAAACG+TGG | - | chr4.2:93319556-93319575 | None:intergenic | 40.0% | |
| CACCATCCTCTGTAAAAATC+AGG | - | chr4.2:93320042-93320061 | None:intergenic | 40.0% | |
| CATTTGCTCTTCTGGTGAAA+AGG | + | chr4.2:93318768-93318787 | MS.gene34509:CDS | 40.0% | |
| CCTAAACCAAGATTCCTGTA+AGG | + | chr4.2:93319892-93319911 | MS.gene34509:CDS | 40.0% | |
| CCTTACAGGAATCTTGGTTT+AGG | - | chr4.2:93319895-93319914 | None:intergenic | 40.0% | |
| CGTTTCCCTTATGTAGTTTG+TGG | + | chr4.2:93319556-93319575 | MS.gene34509:intron | 40.0% | |
| GAAATGCGGATGAAGTTGAA+TGG | + | chr4.2:93320101-93320120 | MS.gene34509:CDS | 40.0% | |
| GAACCATCAAATTGAAGCGA+TGG | - | chr4.2:93319087-93319106 | None:intergenic | 40.0% | |
| GCAGAGACAGAAGTAAAGAT+GGG | - | chr4.2:93318397-93318416 | None:intergenic | 40.0% | |
| GCTTATACAGGACTTCTTTG+AGG | + | chr4.2:93319619-93319638 | MS.gene34509:intron | 40.0% | |
| GGAGTGTGTTCAAATAGCAT+TGG | + | chr4.2:93318838-93318857 | MS.gene34509:CDS | 40.0% | |
| TAGTTCATCAGCCAGTAATG+AGG | - | chr4.2:93319843-93319862 | None:intergenic | 40.0% | |
| TCTACGGTTATCATCCTTAC+AGG | - | chr4.2:93319909-93319928 | None:intergenic | 40.0% | |
| TGAATCGATGTGAACTCCAT+CGG | - | chr4.2:93318168-93318187 | None:intergenic | 40.0% | |
| TGCAGAGACAGAAGTAAAGA+TGG | - | chr4.2:93318398-93318417 | None:intergenic | 40.0% | |
| TGCTCATTATTAGAAGCTCG+TGG | + | chr4.2:93318866-93318885 | MS.gene34509:CDS | 40.0% | |
| TGGTTGTTAGGAACTTGGAT+AGG | - | chr4.2:93321700-93321719 | None:intergenic | 40.0% | |
| TTAGCCAACATTCGAAACTG+TGG | - | chr4.2:93320496-93320515 | None:intergenic | 40.0% | |
| TTGTCCACAGTTTCGAATGT+TGG | + | chr4.2:93320489-93320508 | MS.gene34509:intron | 40.0% | |
| TTGTTGGGAACTTCTCTGTT+GGG | + | chr4.2:93320336-93320355 | MS.gene34509:intron | 40.0% | |
| ! | AGCCTGATTTTTACAGAGGA+TGG | + | chr4.2:93320037-93320056 | MS.gene34509:CDS | 40.0% |
| ! | ATGACGATTTTGCCTTTCTG+TGG | - | chr4.2:93319936-93319955 | None:intergenic | 40.0% |
| ! | ATGTCAGCATTTTCTGCAAC+AGG | + | chr4.2:93322776-93322795 | MS.gene34509:CDS | 40.0% |
| ! | ATTTGGGACGCATCTTTGTA+AGG | + | chr4.2:93321640-93321659 | MS.gene34509:intron | 40.0% |
| ! | CCTGCTCTTTTCTTCTTGTT+GGG | + | chr4.2:93320321-93320340 | MS.gene34509:intron | 40.0% |
| ! | TCGCTTCAATTTGATGGTTC+AGG | + | chr4.2:93319087-93319106 | MS.gene34509:CDS | 40.0% |
| ! | TGTCAGCATTTTCTGCAACA+GGG | + | chr4.2:93322777-93322796 | MS.gene34509:CDS | 40.0% |
| !! | AACAGAAGCATTTGCTCTTC+TGG | + | chr4.2:93318760-93318779 | MS.gene34509:CDS | 40.0% |
| !! | ATCTCCTGGTTTTTATGGAG+TGG | + | chr4.2:93320947-93320966 | MS.gene34509:intron | 40.0% |
| !! | CATCTTTGTAAGGCTAGTCT+TGG | + | chr4.2:93321650-93321669 | MS.gene34509:intron | 40.0% |
| !! | GAAGAAAGCTTTGAGGATTC+TGG | + | chr4.2:93319758-93319777 | MS.gene34509:CDS | 40.0% |
| !! | TCTTCTTCGTCCATTGATTC+TGG | - | chr4.2:93319743-93319762 | None:intergenic | 40.0% |
| !!! | CTCATTGGCTATTTTTGGTG+AGG | + | chr4.2:93318694-93318713 | MS.gene34509:CDS | 40.0% |
| !!! | GACCATCCCCAAGTTTTTTA+AGG | - | chr4.2:93318523-93318542 | None:intergenic | 40.0% |
| !!! | GAGCTTTTGGGATGATATTG+AGG | + | chr4.2:93321460-93321479 | MS.gene34509:CDS | 40.0% |
| AACTTGGATAGGTCAGTGCT+TGG | - | chr4.2:93321689-93321708 | None:intergenic | 45.0% | |
| AAGGCGAGTAGAAGAAGCTT+TGG | + | chr4.2:93318313-93318332 | MS.gene34509:CDS | 45.0% | |
| AAGTTGTCTACCTAGGGACA+TGG | - | chr4.2:93321018-93321037 | None:intergenic | 45.0% | |
| AATCTGCTGGGCTTCAGTTT+CGG | - | chr4.2:93319804-93319823 | None:intergenic | 45.0% | |
| ACAAGCTGCAAGTGACTCAT+TGG | + | chr4.2:93318679-93318698 | MS.gene34509:CDS | 45.0% | |
| ACAGGAATCTTGGTTTAGGG+AGG | - | chr4.2:93319891-93319910 | None:intergenic | 45.0% | |
| ACCGTAGAAGAACCACAGAA+AGG | + | chr4.2:93319921-93319940 | MS.gene34509:CDS | 45.0% | |
| ACCTCTGCTTAGTATGCAGT+TGG | + | chr4.2:93319649-93319668 | MS.gene34509:CDS | 45.0% | |
| ACGTTCTCCTTCATCAAGAG+CGG | - | chr4.2:93318339-93318358 | None:intergenic | 45.0% | |
| AGGTTGCTTGAGTGGATAGT+AGG | - | chr4.2:93318130-93318149 | None:intergenic | 45.0% | |
| AGTTGTCTACCTAGGGACAT+GGG | - | chr4.2:93321017-93321036 | None:intergenic | 45.0% | |
| ATCGGCCAAACCATGTATCA+AGG | - | chr4.2:93318150-93318169 | None:intergenic | 45.0% | |
| ATGATATTGAGGAAGGGCCA+AGG | + | chr4.2:93321471-93321490 | MS.gene34509:CDS | 45.0% | |
| ATGCACGAAGTTCAGATCCA+CGG | - | chr4.2:93318490-93318509 | None:intergenic | 45.0% | |
| CAGCAGATATGTTTGTAGGG+AGG | + | chr4.2:93321369-93321388 | MS.gene34509:CDS | 45.0% | |
| CATACCTGTTGTAGACCAAG+AGG | - | chr4.2:93321506-93321525 | None:intergenic | 45.0% | |
| CCCAACAAGAAGAAAAGAGC+AGG | - | chr4.2:93320324-93320343 | None:intergenic | 45.0% | |
| CCTCTGCTTAGTATGCAGTT+GGG | + | chr4.2:93319650-93319669 | MS.gene34509:CDS | 45.0% | |
| CTCTCCCCGTTTATTTCCTT+TGG | - | chr4.2:93323020-93323039 | None:intergenic | 45.0% | |
| CTTGTTGGGAACTTCTCTGT+TGG | + | chr4.2:93320335-93320354 | MS.gene34509:intron | 45.0% | |
| GAAGAAAAGAGCAGGCAGAA+AGG | - | chr4.2:93320316-93320335 | None:intergenic | 45.0% | |
| GCCCTTAAAAAACTTGGGGA+TGG | + | chr4.2:93318518-93318537 | MS.gene34509:CDS | 45.0% | |
| GCCTTTCTGTGGTTCTTCTA+CGG | - | chr4.2:93319925-93319944 | None:intergenic | 45.0% | |
| GCTAGCTAATGCCTCATTAC+TGG | + | chr4.2:93319829-93319848 | MS.gene34509:CDS | 45.0% | |
| GGACGAAGAAGAAAGCTTTG+AGG | + | chr4.2:93319751-93319770 | MS.gene34509:CDS | 45.0% | |
| GGCAGAAAGGAAAAGTAGAG+AGG | - | chr4.2:93320303-93320322 | None:intergenic | 45.0% | |
| GTGATCTGCCTGAAGATGAA+TGG | + | chr4.2:93322949-93322968 | MS.gene34509:intron | 45.0% | |
| TATGGCTGCTGCTGATGATT+GGG | + | chr4.2:93318985-93319004 | MS.gene34509:CDS | 45.0% | |
| TCCAAGTTCCTAACAACCAG+TGG | + | chr4.2:93321701-93321720 | MS.gene34509:intron | 45.0% | |
| TGCCCATCGCTTCAATTTGA+TGG | + | chr4.2:93319081-93319100 | MS.gene34509:CDS | 45.0% | |
| TGGATGTTCTCTTGGCTGAA+AGG | + | chr4.2:93318294-93318313 | MS.gene34509:CDS | 45.0% | |
| TGTAGACCAAGAGGACCTAA+AGG | - | chr4.2:93321497-93321516 | None:intergenic | 45.0% | |
| TGTTCCTCTTTGTCCACAGA+AGG | + | chr4.2:93320814-93320833 | MS.gene34509:intron | 45.0% | |
| TGTTGGGAACTTCTCTGTTG+GGG | + | chr4.2:93320337-93320356 | MS.gene34509:intron | 45.0% | |
| TGTTGGGGATATGTGTAACG+AGG | + | chr4.2:93320352-93320371 | MS.gene34509:intron | 45.0% | |
| TTCAGAGCCACAACTTCCAA+TGG | - | chr4.2:93322884-93322903 | None:intergenic | 45.0% | |
| ! | ACCACTGGTTGTTAGGAACT+TGG | - | chr4.2:93321705-93321724 | None:intergenic | 45.0% |
| ! | AGCATTTTCTGCAACAGGGA+TGG | + | chr4.2:93322781-93322800 | MS.gene34509:CDS | 45.0% |
| ! | CAGGACTTCTTTGAGGATGT+AGG | + | chr4.2:93319626-93319645 | MS.gene34509:intron | 45.0% |
| ! | CCTCCATATGAGGTGTTTGA+CGG | - | chr4.2:93318614-93318633 | None:intergenic | 45.0% |
| ! | GCCTGCTCTTTTCTTCTTGT+TGG | + | chr4.2:93320320-93320339 | MS.gene34509:intron | 45.0% |
| ! | GTTGTGTGTTTTGCCTCCAA+CGG | + | chr4.2:93322698-93322717 | MS.gene34509:CDS | 45.0% |
| ! | TCTGGTGAAAAGGCATGCAT+TGG | + | chr4.2:93318778-93318797 | MS.gene34509:CDS | 45.0% |
| ! | TTGATACATGGTTTGGCCGA+TGG | + | chr4.2:93318149-93318168 | MS.gene34509:CDS | 45.0% |
| !! | ACAAGAGAGTACTGCTGCTA+TGG | + | chr4.2:93318967-93318986 | MS.gene34509:CDS | 45.0% |
| !! | GAAACTCTTACGGCATTGAC+TGG | + | chr4.2:93320612-93320631 | MS.gene34509:intron | 45.0% |
| AAGGACGGCCAGAATCCAAA+AGG | - | chr4.2:93322366-93322385 | None:intergenic | 50.0% | |
| AGCTAGCAGTGCAATCTGCT+GGG | - | chr4.2:93319816-93319835 | None:intergenic | 50.0% | |
| AGGAGGTTTAAGAGCTGCTG+CGG | + | chr4.2:93318817-93318836 | MS.gene34509:CDS | 50.0% | |
| AGGTCCTCTTGGTCTACAAC+AGG | + | chr4.2:93321499-93321518 | MS.gene34509:CDS | 50.0% | |
| AGTAGCAAGCTGTGAGCATG+CGG | - | chr4.2:93318545-93318564 | None:intergenic | 50.0% | |
| AGTTCAGATCCACGGGTAGA+AGG | - | chr4.2:93318482-93318501 | None:intergenic | 50.0% | |
| ATCCTGAACAACGGGAATGG+AGG | + | chr4.2:93319954-93319973 | MS.gene34509:CDS | 50.0% | |
| CAACAGGGATGGATCCGTAT+AGG | + | chr4.2:93322792-93322811 | MS.gene34509:CDS | 50.0% | |
| CCAACGGTCGGTATTTGTCA+AGG | + | chr4.2:93322714-93322733 | MS.gene34509:CDS | 50.0% | |
| CCCAACTGCATACTAAGCAG+AGG | - | chr4.2:93319653-93319672 | None:intergenic | 50.0% | |
| CCGTCAAACACCTCATATGG+AGG | + | chr4.2:93318611-93318630 | MS.gene34509:CDS | 50.0% | |
| CCTAATGCTAATCGGCAGAC+CGG | + | chr4.2:93319022-93319041 | MS.gene34509:CDS | 50.0% | |
| CCTTGACAAATACCGACCGT+TGG | - | chr4.2:93322717-93322736 | None:intergenic | 50.0% | |
| CTATGGCTGCTGCTGATGAT+TGG | + | chr4.2:93318984-93319003 | MS.gene34509:CDS | 50.0% | |
| CTGCTTAGTATGCAGTTGGG+AGG | + | chr4.2:93319653-93319672 | MS.gene34509:CDS | 50.0% | |
| GTCATCCTGAACAACGGGAA+TGG | + | chr4.2:93319951-93319970 | MS.gene34509:CDS | 50.0% | |
| GTGCAGAGACAGATGCAGTA+GGG | - | chr4.2:93323055-93323074 | None:intergenic | 50.0% | |
| GTTTAGGGAGGAGAGCTTCA+TGG | - | chr4.2:93319879-93319898 | None:intergenic | 50.0% | |
| TAGCTAGCAGTGCAATCTGC+TGG | - | chr4.2:93319817-93319836 | None:intergenic | 50.0% | |
| TGACAAATACCGACCGTTGG+AGG | - | chr4.2:93322714-93322733 | None:intergenic | 50.0% | |
| TGCACGAAGTTCAGATCCAC+GGG | - | chr4.2:93318489-93318508 | None:intergenic | 50.0% | |
| TGTGCAGAGACAGATGCAGT+AGG | - | chr4.2:93323056-93323075 | None:intergenic | 50.0% | |
| ! | CATATGAGGTGTTTGACGGC+CGG | - | chr4.2:93318610-93318629 | None:intergenic | 50.0% |
| ! | GTCTGCCGATTAGCATTAGG+AGG | - | chr4.2:93319022-93319041 | None:intergenic | 50.0% |
| ! | TACTGCAGCTCTAGCACAAC+TGG | + | chr4.2:93318640-93318659 | MS.gene34509:CDS | 50.0% |
| ! | TGTGTTTTGCCTCCAACGGT+CGG | + | chr4.2:93322702-93322721 | MS.gene34509:CDS | 50.0% |
| !! | CATCTTAGTGGGTTCAGGCT+TGG | + | chr4.2:93321042-93321061 | MS.gene34509:intron | 50.0% |
| CCAAGAGGACCTAAAGGCCT+TGG | - | chr4.2:93321491-93321510 | None:intergenic | 55.0% | |
| CCAAGGCCTTTAGGTCCTCT+TGG | + | chr4.2:93321488-93321507 | MS.gene34509:CDS | 55.0% | |
| CGGCCGTCAAACACCTCATA+TGG | + | chr4.2:93318608-93318627 | MS.gene34509:CDS | 55.0% | |
| CGGGGTGCATATCTATCTCC+TGG | + | chr4.2:93320933-93320952 | MS.gene34509:intron | 55.0% | |
| CTCCTCCATTCCCGTTGTTC+AGG | - | chr4.2:93319959-93319978 | None:intergenic | 55.0% | |
| GAATGGAGGAGACGACTCGT+GGG | + | chr4.2:93319968-93319987 | MS.gene34509:CDS | 55.0% | |
| GACTCGTGGGTTCAGTTGAC+AGG | + | chr4.2:93319981-93320000 | MS.gene34509:CDS | 55.0% | |
| GCTTTGGCCGCTCTTGATGA+AGG | + | chr4.2:93318329-93318348 | MS.gene34509:CDS | 55.0% | |
| TGTCTACCTAGGGACATGGG+AGG | - | chr4.2:93321014-93321033 | None:intergenic | 55.0% | |
| TTGGCTTCATCAGCAGCTGC+AGG | + | chr4.2:93318797-93318816 | MS.gene34509:CDS | 55.0% | |
| ! | CCGGTCTGCCGATTAGCATT+AGG | - | chr4.2:93319025-93319044 | None:intergenic | 55.0% |
| !! | TGGGAGGACAAGCTCTGGAA+GGG | + | chr4.2:93319669-93319688 | MS.gene34509:CDS | 55.0% |
| !! | TTGGGAGGACAAGCTCTGGA+AGG | + | chr4.2:93319668-93319687 | MS.gene34509:CDS | 55.0% |
| GAAGCTCCTCCCATGTCCCT+AGG | + | chr4.2:93321005-93321024 | MS.gene34509:intron | 60.0% | |
| GAGGAAGGGCCAAGGCCTTT+AGG | + | chr4.2:93321479-93321498 | MS.gene34509:CDS | 60.0% | |
| GCAGTTGGGAGGACAAGCTC+TGG | + | chr4.2:93319664-93319683 | MS.gene34509:CDS | 60.0% | |
| GCTTCATCAGCAGCTGCAGG+AGG | + | chr4.2:93318800-93318819 | MS.gene34509:CDS | 60.0% | |
| GCTTGTCAGCCTTCTACCCG+TGG | + | chr4.2:93318470-93318489 | MS.gene34509:CDS | 60.0% | |
| GGAATGGAGGAGACGACTCG+TGG | + | chr4.2:93319967-93319986 | MS.gene34509:CDS | 60.0% | |
| GAGAGCTTCATGGCTGCGCG+TGG | - | chr4.2:93319869-93319888 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 93318076 | 93323112 | 93318076 | ID=MS.gene34509 |
| chr4.2 | mRNA | 93318076 | 93323112 | 93318076 | ID=MS.gene34509.t1;Parent=MS.gene34509 |
| chr4.2 | exon | 93318076 | 93319108 | 93318076 | ID=MS.gene34509.t1.exon1;Parent=MS.gene34509.t1 |
| chr4.2 | CDS | 93318076 | 93319108 | 93318076 | ID=cds.MS.gene34509.t1;Parent=MS.gene34509.t1 |
| chr4.2 | exon | 93319629 | 93320144 | 93319629 | ID=MS.gene34509.t1.exon2;Parent=MS.gene34509.t1 |
| chr4.2 | CDS | 93319629 | 93320144 | 93319629 | ID=cds.MS.gene34509.t1;Parent=MS.gene34509.t1 |
| chr4.2 | exon | 93321332 | 93321520 | 93321332 | ID=MS.gene34509.t1.exon3;Parent=MS.gene34509.t1 |
| chr4.2 | CDS | 93321332 | 93321520 | 93321332 | ID=cds.MS.gene34509.t1;Parent=MS.gene34509.t1 |
| chr4.2 | exon | 93322677 | 93322813 | 93322677 | ID=MS.gene34509.t1.exon4;Parent=MS.gene34509.t1 |
| chr4.2 | CDS | 93322677 | 93322813 | 93322677 | ID=cds.MS.gene34509.t1;Parent=MS.gene34509.t1 |
| chr4.2 | exon | 93322950 | 93323112 | 93322950 | ID=MS.gene34509.t1.exon5;Parent=MS.gene34509.t1 |
| chr4.2 | CDS | 93322950 | 93323112 | 93322950 | ID=cds.MS.gene34509.t1;Parent=MS.gene34509.t1 |
| Gene Sequence |
| Protein sequence |
