Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35000.t1 | RHN42290.1 | 98.9 | 363 | 4 | 0 | 1 | 363 | 1 | 363 | 4.40E-127 | 464.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35000.t1 | F4IP06 | 58.1 | 360 | 146 | 2 | 9 | 363 | 4 | 363 | 1.7e-71 | 271.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35000.t1 | A0A396GMM6 | 98.9 | 363 | 4 | 0 | 1 | 363 | 1 | 363 | 3.2e-127 | 464.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene35000 | 0.815707 | 8.05E-52 | -1.69E-46 |
| MS.gene049159 | MS.gene35000 | 0.821398 | 4.12E-53 | -1.69E-46 |
| MS.gene049341 | MS.gene35000 | 0.810137 | 1.34E-50 | -1.69E-46 |
| MS.gene049808 | MS.gene35000 | 0.822221 | 2.66E-53 | -1.69E-46 |
| MS.gene050237 | MS.gene35000 | 0.82063 | 6.20E-53 | -1.69E-46 |
| MS.gene050384 | MS.gene35000 | 0.818336 | 2.07E-52 | -1.69E-46 |
| MS.gene050386 | MS.gene35000 | 0.820852 | 5.51E-53 | -1.69E-46 |
| MS.gene050689 | MS.gene35000 | 0.809598 | 1.75E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene35000 | 0.803746 | 3.01E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene35000 | 0.801657 | 8.12E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene35000 | 0.800863 | 1.18E-48 | -1.69E-46 |
| MS.gene051102 | MS.gene35000 | 0.802041 | 6.77E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene35000 | 0.810423 | 1.16E-50 | -1.69E-46 |
| MS.gene052323 | MS.gene35000 | 0.808694 | 2.73E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene35000 | 0.821929 | 3.11E-53 | -1.69E-46 |
| MS.gene052611 | MS.gene35000 | 0.806078 | 9.80E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene35000 | 0.807019 | 6.20E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene35000 | 0.827735 | 1.33E-54 | -1.69E-46 |
| MS.gene052896 | MS.gene35000 | 0.820995 | 5.11E-53 | -1.69E-46 |
| MS.gene053008 | MS.gene35000 | 0.812872 | 3.41E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene35000 | 0.814269 | 1.68E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene35000 | 0.801362 | 9.33E-49 | -1.69E-46 |
| MS.gene053565 | MS.gene35000 | 0.832371 | 9.82E-56 | -1.69E-46 |
| MS.gene05462 | MS.gene35000 | 0.827764 | 1.31E-54 | -1.69E-46 |
| MS.gene055512 | MS.gene35000 | 0.854531 | 1.16E-61 | -1.69E-46 |
| MS.gene056181 | MS.gene35000 | 0.800373 | 1.49E-48 | -1.69E-46 |
| MS.gene056553 | MS.gene35000 | 0.82018 | 7.86E-53 | -1.69E-46 |
| MS.gene056760 | MS.gene35000 | 0.840669 | 7.57E-58 | -1.69E-46 |
| MS.gene057057 | MS.gene35000 | 0.800706 | 1.27E-48 | -1.69E-46 |
| MS.gene057140 | MS.gene35000 | 0.820151 | 7.98E-53 | -1.69E-46 |
| MS.gene057234 | MS.gene35000 | 0.800075 | 1.71E-48 | -1.69E-46 |
| MS.gene058055 | MS.gene35000 | 0.810501 | 1.12E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene35000 | 0.800251 | 1.57E-48 | -1.69E-46 |
| MS.gene058979 | MS.gene35000 | 0.804192 | 2.43E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene35000 | 0.82423 | 9.03E-54 | -1.69E-46 |
| MS.gene059725 | MS.gene35000 | 0.802626 | 5.13E-49 | -1.69E-46 |
| MS.gene05978 | MS.gene35000 | 0.807278 | 5.47E-50 | -1.69E-46 |
| MS.gene059937 | MS.gene35000 | 0.803649 | 3.15E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene35000 | 0.802673 | 5.02E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene35000 | 0.814821 | 1.27E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35000.t1 | AT2G36740 | 59.710 | 345 | 130 | 3 | 14 | 351 | 9 | 351 | 1.77e-129 | 375 |
| MS.gene35000.t1 | AT2G36740 | 62.126 | 301 | 105 | 3 | 10 | 303 | 5 | 303 | 2.01e-116 | 341 |
Find 64 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCATCATTATCATCAATTT+TGG | 0.077559 | 4.4:-18356010 | None:intergenic |
| GAAGAAAATCTTATCTAATT+TGG | 0.115613 | 4.4:+18355978 | MS.gene35000:CDS |
| GGCTTATATGATTCAGTTTC+TGG | 0.127458 | 4.4:+18359702 | MS.gene35000:CDS |
| AATTATGAACTTGAGGAATT+TGG | 0.176156 | 4.4:+18356978 | MS.gene35000:CDS |
| TCGCCTTTCTTCCTTATTAC+TGG | 0.196750 | 4.4:-18356795 | None:intergenic |
| TATGATTCAGTTTCTGGATA+TGG | 0.207235 | 4.4:+18359708 | MS.gene35000:CDS |
| GTGCATAAAACTGTCTTTAA+TGG | 0.216607 | 4.4:+18357045 | MS.gene35000:CDS |
| CGGCGATTTCGGCTTCTTCT+TGG | 0.253320 | 4.4:-18355728 | None:intergenic |
| GTCGAATTCGTCGGCGATTT+CGG | 0.266319 | 4.4:-18355739 | None:intergenic |
| TTCAACAAGATGAATTGTTC+TGG | 0.284399 | 4.4:+18355664 | MS.gene35000:CDS |
| CAACCTGTTTGCGTTATTAC+TGG | 0.293930 | 4.4:+18358550 | MS.gene35000:CDS |
| CTCTAGAAAAGAAACGAATA+TGG | 0.304931 | 4.4:+18359677 | MS.gene35000:CDS |
| GGCTGTTCTTCATCGGGTTC+AGG | 0.307025 | 4.4:-18355874 | None:intergenic |
| GCGAACAATGACGGAAGTTC+TGG | 0.369171 | 4.4:-18356106 | None:intergenic |
| ACAATGGAGGAAAAGAATTC+AGG | 0.384881 | 4.4:+18355552 | None:intergenic |
| ATAACGCAAACAGGTTGTTC+TGG | 0.392827 | 4.4:-18358544 | None:intergenic |
| CGTATTTGGAGTTTACTAAA+GGG | 0.400482 | 4.4:+18357187 | MS.gene35000:CDS |
| GCGTATGGCAGCCCAGTCTT+TGG | 0.402777 | 4.4:-18358765 | None:intergenic |
| GATATTGGAGATAACCTTGT+AGG | 0.403997 | 4.4:-18356169 | None:intergenic |
| AGATGAATTGTTCTGGGGTC+AGG | 0.416421 | 4.4:+18355671 | MS.gene35000:CDS |
| ATACACTACATATCACAAAA+TGG | 0.416807 | 4.4:+18357075 | MS.gene35000:CDS |
| AAGAAGCGATTGGTATATCC+TGG | 0.422746 | 4.4:+18355925 | MS.gene35000:CDS |
| TCAACAAGATGAATTGTTCT+GGG | 0.454323 | 4.4:+18355665 | MS.gene35000:CDS |
| CTTCCTAATCATTACCTCCT+TGG | 0.455438 | 4.4:-18356079 | None:intergenic |
| TTAGCCAATGTCGCCTTCCC+AGG | 0.459198 | 4.4:-18355943 | None:intergenic |
| CCTCCTTGGCATCATCGTCC+TGG | 0.471257 | 4.4:-18356065 | None:intergenic |
| TCGTATTTGGAGTTTACTAA+AGG | 0.472369 | 4.4:+18357186 | MS.gene35000:CDS |
| ATGCCAAGGAGGTAATGATT+AGG | 0.476554 | 4.4:+18356076 | MS.gene35000:CDS |
| CACATGATCGGTCCTTGGCT+CGG | 0.478772 | 4.4:+18359781 | MS.gene35000:CDS |
| GAGATCGAATCTTCTACTAC+TGG | 0.491006 | 4.4:+18355584 | MS.gene35000:CDS |
| GAATGGCTTCTCTTTCAGCT+TGG | 0.491571 | 4.4:-18356128 | None:intergenic |
| AGTTACGTCTTGATCGAAAT+CGG | 0.494921 | 4.4:-18355763 | None:intergenic |
| AAACCAGTAATAACGCAAAC+AGG | 0.498211 | 4.4:-18358553 | None:intergenic |
| AAGAAAGGCTCTTACTTGGC+AGG | 0.501328 | 4.4:-18358577 | None:intergenic |
| TTCAGCTTGGCGAACAATGA+CGG | 0.524822 | 4.4:-18356115 | None:intergenic |
| ACATCCACATGATCGGTCCT+TGG | 0.525200 | 4.4:+18359776 | MS.gene35000:CDS |
| AGGTACCGTGATCCAAAGAC+TGG | 0.525622 | 4.4:+18358753 | MS.gene35000:intron |
| GAATCTTCATCCTCAAAAGT+AGG | 0.528439 | 4.4:-18359816 | None:intergenic |
| CTGCAGAAATTATGAACTTG+AGG | 0.529753 | 4.4:+18356971 | MS.gene35000:intron |
| TGCTTTGAGAGCTTCGCGAA+TGG | 0.533499 | 4.4:-18356145 | None:intergenic |
| TCTAGAAAAGAAACGAATAT+GGG | 0.542033 | 4.4:+18359678 | MS.gene35000:CDS |
| ATATCCTGGGAAGGCGACAT+TGG | 0.555043 | 4.4:+18355939 | MS.gene35000:CDS |
| AAAATATACATCCACATGAT+CGG | 0.556585 | 4.4:+18359769 | MS.gene35000:CDS |
| AAAATTGATGATAATGATGA+CGG | 0.559093 | 4.4:+18356012 | MS.gene35000:CDS |
| CAGCCAGTAATAAGGAAGAA+AGG | 0.573774 | 4.4:+18356792 | MS.gene35000:intron |
| AGCTCTCAAAGCAACCTACA+AGG | 0.574053 | 4.4:+18356155 | MS.gene35000:CDS |
| CGTGCATCTCGAGCGACAAG+AGG | 0.584790 | 4.4:+18355609 | MS.gene35000:CDS |
| AGAAGCGATTGGTATATCCT+GGG | 0.596937 | 4.4:+18355926 | MS.gene35000:CDS |
| GTATTTGGAGTTTACTAAAG+GGG | 0.598121 | 4.4:+18357188 | MS.gene35000:CDS |
| CGCACATTCTTGAGACGTTG+TGG | 0.601571 | 4.4:-18357232 | None:intergenic |
| CGAGCCAAGGACCGATCATG+TGG | 0.604117 | 4.4:-18359780 | None:intergenic |
| GGAGAAGAAAATGTCACAAG+AGG | 0.609231 | 4.4:+18356818 | MS.gene35000:CDS |
| TGTGATATGTAGTGTATCTG+TGG | 0.609479 | 4.4:-18357069 | None:intergenic |
| GCAGCCCAGTCTTTGGATCA+CGG | 0.611548 | 4.4:-18358758 | None:intergenic |
| CAACCAGGACGATGATGCCA+AGG | 0.612779 | 4.4:+18356062 | MS.gene35000:CDS |
| AAACAACAAGAACAACAACC+AGG | 0.612812 | 4.4:+18356047 | MS.gene35000:CDS |
| GCGATTGGTATATCCTGGGA+AGG | 0.627485 | 4.4:+18355930 | MS.gene35000:CDS |
| AGAAAAGAAACGAATATGGG+AGG | 0.647868 | 4.4:+18359681 | MS.gene35000:CDS |
| AATTCTACGAAACCGAGCCA+AGG | 0.655235 | 4.4:-18359793 | None:intergenic |
| CAACAAGATGAATTGTTCTG+GGG | 0.658361 | 4.4:+18355666 | MS.gene35000:CDS |
| GAAATCGGAGTCGAATTCGT+CGG | 0.659651 | 4.4:-18355748 | None:intergenic |
| AGTAATAAGGAAGAAAGGCG+AGG | 0.677909 | 4.4:+18356797 | MS.gene35000:CDS |
| CCAGGACGATGATGCCAAGG+AGG | 0.685706 | 4.4:+18356065 | MS.gene35000:CDS |
| GGTACCGTGATCCAAAGACT+GGG | 0.697285 | 4.4:+18358754 | MS.gene35000:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTTTTTTTTCTTTTTTT+TGG | + | chr4.4:18356767-18356786 | MS.gene35000:intron | 10.0% |
| !! | TACTGTTATAAAAGAATATT+AGG | - | chr4.4:18358877-18358896 | None:intergenic | 15.0% |
| !! | TTATAAGAACAATTATAACT+AGG | - | chr4.4:18359391-18359410 | None:intergenic | 15.0% |
| !! | TTCAATACAAAAAAAATTGA+CGG | + | chr4.4:18358191-18358210 | MS.gene35000:intron | 15.0% |
| !!! | ATCATAAAAAGTTATCTTTT+TGG | - | chr4.4:18358945-18358964 | None:intergenic | 15.0% |
| !!! | CTAACTAATTTTTGTAAATT+CGG | - | chr4.4:18357600-18357619 | None:intergenic | 15.0% |
| !!! | GTTTAATTAGTTTAAAGTTA+GGG | + | chr4.4:18358213-18358232 | MS.gene35000:intron | 15.0% |
| !! | AAATATAGTGCTAGAATAAA+AGG | - | chr4.4:18357260-18357279 | None:intergenic | 20.0% |
| !! | AACTTAAATGCTTATCATAT+AGG | - | chr4.4:18356687-18356706 | None:intergenic | 20.0% |
| !! | AATATAGTGCTAGAATAAAA+GGG | - | chr4.4:18357259-18357278 | None:intergenic | 20.0% |
| !! | CGAATTTACAAAAATTAGTT+AGG | + | chr4.4:18357598-18357617 | MS.gene35000:intron | 20.0% |
| !! | CTTATTTCAATAATCTTTCT+GGG | - | chr4.4:18356482-18356501 | None:intergenic | 20.0% |
| !! | GAAGAAAATCTTATCTAATT+TGG | + | chr4.4:18355978-18355997 | MS.gene35000:CDS | 20.0% |
| !! | TACAAAAATTAGTTAGGTTT+AGG | + | chr4.4:18357604-18357623 | MS.gene35000:intron | 20.0% |
| !! | TTAGTAATTCAATAACATCA+TGG | - | chr4.4:18359060-18359079 | None:intergenic | 20.0% |
| !! | TTATTTCAATAATCTTTCTG+GGG | - | chr4.4:18356481-18356500 | None:intergenic | 20.0% |
| !!! | AAAATTGATGATAATGATGA+CGG | + | chr4.4:18356012-18356031 | MS.gene35000:CDS | 20.0% |
| !!! | AAATATAAAAGCATTCATGT+GGG | + | chr4.4:18359509-18359528 | MS.gene35000:intron | 20.0% |
| !!! | ACTAAGTGTTTTAGATAATT+AGG | + | chr4.4:18357884-18357903 | MS.gene35000:intron | 20.0% |
| !!! | ATTAGTTTATAGACAATAAC+TGG | + | chr4.4:18357415-18357434 | MS.gene35000:intron | 20.0% |
| !!! | ATTTTTGTAAATTCGGTATT+TGG | - | chr4.4:18357593-18357612 | None:intergenic | 20.0% |
| !!! | CTAAGTGTTTTAGATAATTA+GGG | + | chr4.4:18357885-18357904 | MS.gene35000:intron | 20.0% |
| !!! | CTTGTAATTGATTTTAATTG+AGG | + | chr4.4:18359621-18359640 | MS.gene35000:intron | 20.0% |
| !!! | CTTTTAAAATAATTCGACAA+CGG | + | chr4.4:18358799-18358818 | MS.gene35000:CDS | 20.0% |
| !!! | GGTTTAATTAGTTTAAAGTT+AGG | + | chr4.4:18358212-18358231 | MS.gene35000:intron | 20.0% |
| !!! | GTAAAACTTTTTCTACTTAA+AGG | - | chr4.4:18358004-18358023 | None:intergenic | 20.0% |
| !!! | TAAATATAAAAGCATTCATG+TGG | + | chr4.4:18359508-18359527 | MS.gene35000:intron | 20.0% |
| !!! | TCATCATTATCATCAATTTT+GGG | - | chr4.4:18356012-18356031 | None:intergenic | 20.0% |
| !!! | TTTATTCTAGCACTATATTT+TGG | + | chr4.4:18357260-18357279 | MS.gene35000:intron | 20.0% |
| !!! | TTTTATCTATTGTTGTGATA+AGG | - | chr4.4:18356410-18356429 | None:intergenic | 20.0% |
| ! | AAAAAAAAAAGTAGTTCAGC+CGG | + | chr4.4:18358667-18358686 | MS.gene35000:intron | 25.0% |
| ! | AAAATATACATCCACATGAT+CGG | + | chr4.4:18359769-18359788 | MS.gene35000:CDS | 25.0% |
| ! | AAATTAGTTAGGTTTAGGAA+AGG | + | chr4.4:18357609-18357628 | MS.gene35000:intron | 25.0% |
| ! | AAGCATAATTGAAACATCAA+AGG | - | chr4.4:18356945-18356964 | None:intergenic | 25.0% |
| ! | AATAAGCTTATAACAGCTTA+TGG | + | chr4.4:18356496-18356515 | MS.gene35000:intron | 25.0% |
| ! | AATGAATAAAAAGAAGCGAT+TGG | + | chr4.4:18355915-18355934 | MS.gene35000:CDS | 25.0% |
| ! | AATGACGAAACAATTTCTTT+GGG | - | chr4.4:18357359-18357378 | None:intergenic | 25.0% |
| ! | AATTATGAACTTGAGGAATT+TGG | + | chr4.4:18356978-18356997 | MS.gene35000:CDS | 25.0% |
| ! | ACAGATTGCTATATGTAAAA+TGG | - | chr4.4:18357149-18357168 | None:intergenic | 25.0% |
| ! | AGGATTAAACACAATTTCAT+GGG | - | chr4.4:18359371-18359390 | None:intergenic | 25.0% |
| ! | ATACACTACATATCACAAAA+TGG | + | chr4.4:18357075-18357094 | MS.gene35000:CDS | 25.0% |
| ! | ATGTAATATATTCCGTTTCT+TGG | + | chr4.4:18357302-18357321 | MS.gene35000:intron | 25.0% |
| ! | ATGTATAGTAAACAATGAGT+AGG | + | chr4.4:18357647-18357666 | MS.gene35000:intron | 25.0% |
| ! | CTTAACAGAATCTATGTAAA+TGG | + | chr4.4:18356588-18356607 | MS.gene35000:intron | 25.0% |
| ! | GAATTCGTTAGAGAAAAAAT+TGG | + | chr4.4:18358162-18358181 | MS.gene35000:intron | 25.0% |
| ! | GCTTATTTCAATAATCTTTC+TGG | - | chr4.4:18356483-18356502 | None:intergenic | 25.0% |
| ! | TAAGATTTGCAACTATGTAT+GGG | + | chr4.4:18358034-18358053 | MS.gene35000:intron | 25.0% |
| ! | TAATTCAATAACATCATGGT+GGG | - | chr4.4:18359056-18359075 | None:intergenic | 25.0% |
| ! | TACATAGATTCTGTTAAGAT+TGG | - | chr4.4:18356586-18356605 | None:intergenic | 25.0% |
| ! | TAGGATTAAACACAATTTCA+TGG | - | chr4.4:18359372-18359391 | None:intergenic | 25.0% |
| ! | TCTAGAAAAGAAACGAATAT+GGG | + | chr4.4:18359678-18359697 | MS.gene35000:CDS | 25.0% |
| ! | TGAATCACAGAAAAAGATAT+TGG | - | chr4.4:18356187-18356206 | None:intergenic | 25.0% |
| ! | TTGTACCTCAAATATTGTTA+AGG | + | chr4.4:18358714-18358733 | MS.gene35000:intron | 25.0% |
| !! | ATCTTTTTCTGTGATTCATT+AGG | + | chr4.4:18356189-18356208 | MS.gene35000:intron | 25.0% |
| !! | GTCATCATTATCATCAATTT+TGG | - | chr4.4:18356013-18356032 | None:intergenic | 25.0% |
| !! | TAACAATATTTGAGGTACAA+TGG | - | chr4.4:18358714-18358733 | None:intergenic | 25.0% |
| !! | TAATTCTTCTTGATTTTCTC+AGG | + | chr4.4:18355849-18355868 | MS.gene35000:intron | 25.0% |
| !! | TATCTAAAACACTTAGTTGT+GGG | - | chr4.4:18357881-18357900 | None:intergenic | 25.0% |
| !! | TCTTTTTCTGTGATTCATTA+GGG | + | chr4.4:18356190-18356209 | MS.gene35000:intron | 25.0% |
| !! | TGATGTTTCAATTATGCTTT+TGG | + | chr4.4:18356946-18356965 | MS.gene35000:intron | 25.0% |
| !! | TTATCTAAAACACTTAGTTG+TGG | - | chr4.4:18357882-18357901 | None:intergenic | 25.0% |
| !!! | AGCAATCTGTTTATTTTTTC+AGG | + | chr4.4:18357159-18357178 | MS.gene35000:intron | 25.0% |
| AAGTTTACTTGCAATCAAGA+AGG | - | chr4.4:18358830-18358849 | None:intergenic | 30.0% | |
| AATTCAATAACATCATGGTG+GGG | - | chr4.4:18359055-18359074 | None:intergenic | 30.0% | |
| ACATAGTTGCAAATCTTACT+AGG | - | chr4.4:18358032-18358051 | None:intergenic | 30.0% | |
| ACTACATATCACAAAATGGT+TGG | + | chr4.4:18357079-18357098 | MS.gene35000:intron | 30.0% | |
| ATAATATGTGAGGTTGAAGA+TGG | + | chr4.4:18358295-18358314 | MS.gene35000:intron | 30.0% | |
| ATAGTAAACAATGAGTAGGA+AGG | + | chr4.4:18357651-18357670 | MS.gene35000:intron | 30.0% | |
| ATTGTTGGATAGCTAATGAT+GGG | + | chr4.4:18359252-18359271 | MS.gene35000:intron | 30.0% | |
| CAAAGAAATTGTTTCGTCAT+TGG | + | chr4.4:18357358-18357377 | MS.gene35000:intron | 30.0% | |
| CAATGACGAAACAATTTCTT+TGG | - | chr4.4:18357360-18357379 | None:intergenic | 30.0% | |
| CTATCTTGAAAAACAGCTTA+TGG | - | chr4.4:18356351-18356370 | None:intergenic | 30.0% | |
| GAAAACTAAAACAAACAAGC+AGG | - | chr4.4:18356915-18356934 | None:intergenic | 30.0% | |
| GAACTCCTTAACAATATTTG+AGG | - | chr4.4:18358722-18358741 | None:intergenic | 30.0% | |
| GAACTTTATGAACCAAGAAA+CGG | - | chr4.4:18357317-18357336 | None:intergenic | 30.0% | |
| GGTCAATATTAGAATACACT+TGG | + | chr4.4:18356867-18356886 | MS.gene35000:intron | 30.0% | |
| GTAAGATTTGCAACTATGTA+TGG | + | chr4.4:18358033-18358052 | MS.gene35000:intron | 30.0% | |
| GTAATTCAATAACATCATGG+TGG | - | chr4.4:18359057-18359076 | None:intergenic | 30.0% | |
| GTGCATAAAACTGTCTTTAA+TGG | + | chr4.4:18357045-18357064 | MS.gene35000:CDS | 30.0% | |
| GTTAATGTGATTCACTTCAT+AGG | + | chr4.4:18358898-18358917 | MS.gene35000:intron | 30.0% | |
| TAGACAATAACTGGAATAAC+TGG | + | chr4.4:18357424-18357443 | MS.gene35000:intron | 30.0% | |
| TATTGTTGGATAGCTAATGA+TGG | + | chr4.4:18359251-18359270 | MS.gene35000:intron | 30.0% | |
| TCAACAAGATGAATTGTTCT+GGG | + | chr4.4:18355665-18355684 | MS.gene35000:CDS | 30.0% | |
| TCACATCAATACATCAAGAA+AGG | - | chr4.4:18358595-18358614 | None:intergenic | 30.0% | |
| TCTGAAAAGCTAGAGAAATT+GGG | - | chr4.4:18359310-18359329 | None:intergenic | 30.0% | |
| TGACATTATAACAAGTGCTA+AGG | + | chr4.4:18357517-18357536 | MS.gene35000:intron | 30.0% | |
| TTATAATCCAACTGAACTAC+TGG | - | chr4.4:18358635-18358654 | None:intergenic | 30.0% | |
| TTCAACAAGATGAATTGTTC+TGG | + | chr4.4:18355664-18355683 | MS.gene35000:CDS | 30.0% | |
| TTCAACCTCACATATTATGA+AGG | - | chr4.4:18358293-18358312 | None:intergenic | 30.0% | |
| ! | AACATTTTCAGACCATAATC+AGG | - | chr4.4:18356752-18356771 | None:intergenic | 30.0% |
| ! | ATTCTTTCATCATCGTTTTG+TGG | - | chr4.4:18355898-18355917 | None:intergenic | 30.0% |
| ! | CGTATTTGGAGTTTACTAAA+GGG | + | chr4.4:18357187-18357206 | MS.gene35000:CDS | 30.0% |
| ! | CTCTAGAAAAGAAACGAATA+TGG | + | chr4.4:18359677-18359696 | MS.gene35000:CDS | 30.0% |
| ! | GCAGTTGAACATAAATGTTT+TGG | + | chr4.4:18357541-18357560 | MS.gene35000:intron | 30.0% |
| ! | GTATTTGGAGTTTACTAAAG+GGG | + | chr4.4:18357188-18357207 | MS.gene35000:CDS | 30.0% |
| ! | TAATCGGTATGAATGAGTTT+TGG | - | chr4.4:18355795-18355814 | None:intergenic | 30.0% |
| ! | TATGATTCAGTTTCTGGATA+TGG | + | chr4.4:18359708-18359727 | MS.gene35000:CDS | 30.0% |
| ! | TCATTATCATCAATTTTGGG+AGG | - | chr4.4:18356009-18356028 | None:intergenic | 30.0% |
| ! | TCGTATTTGGAGTTTACTAA+AGG | + | chr4.4:18357186-18357205 | MS.gene35000:CDS | 30.0% |
| ! | TGAGAAGAATTTAAAGTACC+CGG | + | chr4.4:18358386-18358405 | MS.gene35000:intron | 30.0% |
| ! | TTCAGATGGTATCATTTTAC+TGG | + | chr4.4:18357484-18357503 | MS.gene35000:intron | 30.0% |
| !! | ATGTTGGTAACTCTTACAAA+TGG | + | chr4.4:18358319-18358338 | MS.gene35000:intron | 30.0% |
| !! | TGCATTTAGTTTGGTTGTAT+TGG | + | chr4.4:18357117-18357136 | MS.gene35000:intron | 30.0% |
| !! | TGTTGGTAACTCTTACAAAT+GGG | + | chr4.4:18358320-18358339 | MS.gene35000:intron | 30.0% |
| !!! | ATAAATGTTTTGGAGACCAA+GGG | + | chr4.4:18357551-18357570 | MS.gene35000:intron | 30.0% |
| !!! | TTTTTCAGGTTGTTCGTATT+TGG | + | chr4.4:18357173-18357192 | MS.gene35000:intron | 30.0% |
| AAACAACAAGAACAACAACC+AGG | + | chr4.4:18356047-18356066 | MS.gene35000:CDS | 35.0% | |
| AAACCAGTAATAACGCAAAC+AGG | - | chr4.4:18358556-18358575 | None:intergenic | 35.0% | |
| AAGTTAGGGTAGCTACTATA+TGG | + | chr4.4:18358227-18358246 | MS.gene35000:intron | 35.0% | |
| AATAACTGGACACATTCCAA+AGG | + | chr4.4:18357438-18357457 | MS.gene35000:intron | 35.0% | |
| ACAACCAAACTAAATGCACA+TGG | - | chr4.4:18357115-18357134 | None:intergenic | 35.0% | |
| ACATGCCTTCATAATATGTG+AGG | + | chr4.4:18358285-18358304 | MS.gene35000:intron | 35.0% | |
| AGAAAAGAAACGAATATGGG+AGG | + | chr4.4:18359681-18359700 | MS.gene35000:CDS | 35.0% | |
| AGATAGCTTATGCTTCTGTT+TGG | + | chr4.4:18356365-18356384 | MS.gene35000:intron | 35.0% | |
| AGGATGAAGATTCTGACTAA+AGG | + | chr4.4:18359826-18359845 | MS.gene35000:CDS | 35.0% | |
| AGTTACGTCTTGATCGAAAT+CGG | - | chr4.4:18355766-18355785 | None:intergenic | 35.0% | |
| ATAGACAAAGGGAAATCTTC+CGG | - | chr4.4:18358689-18358708 | None:intergenic | 35.0% | |
| ATGTATGGGTCAGAAATGTT+GGG | + | chr4.4:18358048-18358067 | MS.gene35000:intron | 35.0% | |
| CAACAAGATGAATTGTTCTG+GGG | + | chr4.4:18355666-18355685 | MS.gene35000:CDS | 35.0% | |
| CATTCCATGTGCATTTAGTT+TGG | + | chr4.4:18357108-18357127 | MS.gene35000:intron | 35.0% | |
| CTGCAGAAATTATGAACTTG+AGG | + | chr4.4:18356971-18356990 | MS.gene35000:intron | 35.0% | |
| CTTAAGATGACATGGTTCAT+TGG | - | chr4.4:18359133-18359152 | None:intergenic | 35.0% | |
| CTTATAACAGCTTATGGACA+TGG | + | chr4.4:18356502-18356521 | MS.gene35000:intron | 35.0% | |
| CTTTCCTTCTTAAGATGACA+TGG | - | chr4.4:18359141-18359160 | None:intergenic | 35.0% | |
| GAATCTTCATCCTCAAAAGT+AGG | - | chr4.4:18359819-18359838 | None:intergenic | 35.0% | |
| GATATTGGAGATAACCTTGT+AGG | - | chr4.4:18356172-18356191 | None:intergenic | 35.0% | |
| GCAATCATGAGCATAAATGA+TGG | + | chr4.4:18358080-18358099 | MS.gene35000:intron | 35.0% | |
| GGCTTATATGATTCAGTTTC+TGG | + | chr4.4:18359702-18359721 | MS.gene35000:CDS | 35.0% | |
| GGGTCTATCTTACAAAAGAA+AGG | + | chr4.4:18357905-18357924 | MS.gene35000:intron | 35.0% | |
| GGTTTGATCTAATGTTCCAT+AGG | + | chr4.4:18359007-18359026 | MS.gene35000:intron | 35.0% | |
| GTAACTCTTACAAATGGGTA+GGG | + | chr4.4:18358325-18358344 | MS.gene35000:intron | 35.0% | |
| GTACAATGGCTATAGACAAA+GGG | - | chr4.4:18358700-18358719 | None:intergenic | 35.0% | |
| GTTCTTCTAAACAATATCCC+AGG | + | chr4.4:18356530-18356549 | MS.gene35000:intron | 35.0% | |
| TAAACACAATTTCATGGGTG+TGG | - | chr4.4:18359366-18359385 | None:intergenic | 35.0% | |
| TAACTCTTACAAATGGGTAG+GGG | + | chr4.4:18358326-18358345 | MS.gene35000:intron | 35.0% | |
| TACATAGAATTTCCTGATGC+CGG | - | chr4.4:18358408-18358427 | None:intergenic | 35.0% | |
| TATGTATGGGTCAGAAATGT+TGG | + | chr4.4:18358047-18358066 | MS.gene35000:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr4.4:18357776-18357795 | None:intergenic | 35.0% | |
| TGAACCATGTCATCTTAAGA+AGG | + | chr4.4:18359134-18359153 | MS.gene35000:intron | 35.0% | |
| TGAGCATAAATGATGGTTGT+AGG | + | chr4.4:18358087-18358106 | MS.gene35000:intron | 35.0% | |
| TGTATTTGTGCTCATCTAGT+GGG | + | chr4.4:18356271-18356290 | MS.gene35000:intron | 35.0% | |
| TGTGATATGTAGTGTATCTG+TGG | - | chr4.4:18357072-18357091 | None:intergenic | 35.0% | |
| TTAGTTAGGTTTAGGAAAGG+AGG | + | chr4.4:18357612-18357631 | MS.gene35000:intron | 35.0% | |
| TTCCAAACAACACCTGATTA+TGG | + | chr4.4:18356737-18356756 | MS.gene35000:intron | 35.0% | |
| TTGAAGTAGAGAAATGCTTC+AGG | + | chr4.4:18357966-18357985 | MS.gene35000:intron | 35.0% | |
| TTGATCTAATGTTCCATAGG+AGG | + | chr4.4:18359010-18359029 | MS.gene35000:intron | 35.0% | |
| TTGATTACCAGTAGTTCAGT+TGG | + | chr4.4:18358625-18358644 | MS.gene35000:intron | 35.0% | |
| ! | AAAGCTTCTTTTGTAGCGTA+TGG | - | chr4.4:18358783-18358802 | None:intergenic | 35.0% |
| ! | AGCATTTAAGTTAGAAGCAC+TGG | + | chr4.4:18356695-18356714 | MS.gene35000:intron | 35.0% |
| ! | CATTGTCGATCTCTTTTTCT+TGG | - | chr4.4:18359742-18359761 | None:intergenic | 35.0% |
| ! | CTCTGAAAAGCTAGAGAAAT+TGG | - | chr4.4:18359311-18359330 | None:intergenic | 35.0% |
| ! | TCACATATTATGAAGGCATG+TGG | - | chr4.4:18358286-18358305 | None:intergenic | 35.0% |
| !! | AGGATTATTTTGCAGCATTC+TGG | + | chr4.4:18359641-18359660 | MS.gene35000:intron | 35.0% |
| !! | TCGTAGAATTCCTACTTTTG+AGG | + | chr4.4:18359806-18359825 | MS.gene35000:CDS | 35.0% |
| !! | TTTCTTAGTCTTGAAGTCCA+GGG | + | chr4.4:18359221-18359240 | MS.gene35000:intron | 35.0% |
| !!! | CATAAATGTTTTGGAGACCA+AGG | + | chr4.4:18357550-18357569 | MS.gene35000:intron | 35.0% |
| !!! | CTTTTTTTTTCCTTCTGCAG+TGG | + | chr4.4:18358986-18359005 | MS.gene35000:intron | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr4.4:18357775-18357794 | MS.gene35000:intron | 35.0% |
| !!! | TTTTCTTAGTCTTGAAGTCC+AGG | + | chr4.4:18359220-18359239 | MS.gene35000:intron | 35.0% |
| AACTCTTACAAATGGGTAGG+GGG | + | chr4.4:18358327-18358346 | MS.gene35000:intron | 40.0% | |
| AAGAAGCGATTGGTATATCC+TGG | + | chr4.4:18355925-18355944 | MS.gene35000:CDS | 40.0% | |
| AAGCTAGAGAAATTGGGTGA+AGG | - | chr4.4:18359304-18359323 | None:intergenic | 40.0% | |
| AAGGAGTTCTCTCTTGATAC+AGG | + | chr4.4:18358733-18358752 | MS.gene35000:intron | 40.0% | |
| ACAACTCAAGAGAAATCCCT+TGG | - | chr4.4:18357570-18357589 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr4.4:18357782-18357801 | None:intergenic | 40.0% | |
| ACATAGAATTTCCTGATGCC+GGG | - | chr4.4:18358407-18358426 | None:intergenic | 40.0% | |
| AGAAGCGATTGGTATATCCT+GGG | + | chr4.4:18355926-18355945 | MS.gene35000:CDS | 40.0% | |
| AGTAATAAGGAAGAAAGGCG+AGG | + | chr4.4:18356797-18356816 | MS.gene35000:CDS | 40.0% | |
| ATAACGCAAACAGGTTGTTC+TGG | - | chr4.4:18358547-18358566 | None:intergenic | 40.0% | |
| ATCTACTAGCATAAGCACCT+GGG | - | chr4.4:18356550-18356569 | None:intergenic | 40.0% | |
| ATGATGGTTGTAGGAATGAG+TGG | + | chr4.4:18358096-18358115 | MS.gene35000:intron | 40.0% | |
| ATGCCAAGGAGGTAATGATT+AGG | + | chr4.4:18356076-18356095 | MS.gene35000:CDS | 40.0% | |
| ATGTCCCACAATATCCAAAC+TGG | + | chr4.4:18357938-18357957 | MS.gene35000:intron | 40.0% | |
| CAACCTGTTTGCGTTATTAC+TGG | + | chr4.4:18358550-18358569 | MS.gene35000:CDS | 40.0% | |
| CAGCCAGTAATAAGGAAGAA+AGG | + | chr4.4:18356792-18356811 | MS.gene35000:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr4.4:18357781-18357800 | None:intergenic | 40.0% | |
| CATCAAGAAAGGCTCTTACT+TGG | - | chr4.4:18358584-18358603 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr4.4:18357750-18357769 | None:intergenic | 40.0% | |
| CTGTAAGAGCTATTGCATGA+GGG | + | chr4.4:18359478-18359497 | MS.gene35000:intron | 40.0% | |
| CTGTCCAGTTTGGATATTGT+GGG | - | chr4.4:18357945-18357964 | None:intergenic | 40.0% | |
| CTTCCTAATCATTACCTCCT+TGG | - | chr4.4:18356082-18356101 | None:intergenic | 40.0% | |
| GAGATCGAATCTTCTACTAC+TGG | + | chr4.4:18355584-18355603 | MS.gene35000:CDS | 40.0% | |
| GAGTACCCACAACTAAGTAA+GGG | + | chr4.4:18357676-18357695 | MS.gene35000:intron | 40.0% | |
| GCTCTCACAAATAATCTCAC+AGG | - | chr4.4:18356304-18356323 | None:intergenic | 40.0% | |
| GGAGAAGAAAATGTCACAAG+AGG | + | chr4.4:18356818-18356837 | MS.gene35000:CDS | 40.0% | |
| GGTAACTCTTACAAATGGGT+AGG | + | chr4.4:18358324-18358343 | MS.gene35000:intron | 40.0% | |
| GGTACAATGGCTATAGACAA+AGG | - | chr4.4:18358701-18358720 | None:intergenic | 40.0% | |
| GTGTATTTGTGCTCATCTAG+TGG | + | chr4.4:18356270-18356289 | MS.gene35000:intron | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | - | chr4.4:18357826-18357845 | None:intergenic | 40.0% | |
| TATCTACTAGCATAAGCACC+TGG | - | chr4.4:18356551-18356570 | None:intergenic | 40.0% | |
| TCGCCTTTCTTCCTTATTAC+TGG | - | chr4.4:18356798-18356817 | None:intergenic | 40.0% | |
| TGTAAGAGCTATTGCATGAG+GGG | + | chr4.4:18359479-18359498 | MS.gene35000:intron | 40.0% | |
| TGTAGGAATGAGTGGAGTAT+GGG | + | chr4.4:18358104-18358123 | MS.gene35000:intron | 40.0% | |
| TTAGATCAAACCACTGCAGA+AGG | - | chr4.4:18358999-18359018 | None:intergenic | 40.0% | |
| TTAGGTTTAGGAAAGGAGGA+TGG | + | chr4.4:18357616-18357635 | MS.gene35000:intron | 40.0% | |
| TTGTAGGAATGAGTGGAGTA+TGG | + | chr4.4:18358103-18358122 | MS.gene35000:intron | 40.0% | |
| ! | AATTTAAAGTACCCGGCATC+AGG | + | chr4.4:18358393-18358412 | MS.gene35000:intron | 40.0% |
| ! | ACACTTAGTTGTGGGTATTG+AGG | - | chr4.4:18357873-18357892 | None:intergenic | 40.0% |
| ! | AGAGTACCCACAACTAAGTA+AGG | + | chr4.4:18357675-18357694 | MS.gene35000:intron | 40.0% |
| ! | CATATTATGAAGGCATGTGG+TGG | - | chr4.4:18358283-18358302 | None:intergenic | 40.0% |
| ! | GGGAGTTGGTTAATGATAGT+AGG | + | chr4.4:18359529-18359548 | MS.gene35000:intron | 40.0% |
| ! | GTCGATCTCTTTTTCTTGGT+TGG | - | chr4.4:18359738-18359757 | None:intergenic | 40.0% |
| ! | GTTTTGTGGCTGTTCTTCAT+CGG | - | chr4.4:18355884-18355903 | None:intergenic | 40.0% |
| ! | TAGCTTTTCAGAGAGAGAGA+TGG | + | chr4.4:18359318-18359337 | MS.gene35000:intron | 40.0% |
| ! | TTTTGTGGCTGTTCTTCATC+GGG | - | chr4.4:18355883-18355902 | None:intergenic | 40.0% |
| !! | AAAAGCATTCATGTGGGAGT+TGG | + | chr4.4:18359515-18359534 | MS.gene35000:intron | 40.0% |
| !! | ACTTAGTTGTGGGTATTGAG+GGG | - | chr4.4:18357871-18357890 | None:intergenic | 40.0% |
| !! | CACTTAGTTGTGGGTATTGA+GGG | - | chr4.4:18357872-18357891 | None:intergenic | 40.0% |
| !! | CTTTTAGAAGCTGCTCAAAC+AGG | + | chr4.4:18356846-18356865 | MS.gene35000:CDS | 40.0% |
| !! | GACCATAATCAGGTGTTGTT+TGG | - | chr4.4:18356742-18356761 | None:intergenic | 40.0% |
| !!! | TTTTGGCTCAGCCAGTAATA+AGG | + | chr4.4:18356784-18356803 | MS.gene35000:intron | 40.0% |
| AAGAAAGGCTCTTACTTGGC+AGG | - | chr4.4:18358580-18358599 | None:intergenic | 45.0% | |
| AATTCTACGAAACCGAGCCA+AGG | - | chr4.4:18359796-18359815 | None:intergenic | 45.0% | |
| ACAACTAAGTAAGGGCAACC+CGG | + | chr4.4:18357684-18357703 | MS.gene35000:intron | 45.0% | |
| ACATTCCAAAGGAAGGACCT+TGG | + | chr4.4:18357449-18357468 | MS.gene35000:intron | 45.0% | |
| ACTGGACACATTCCAAAGGA+AGG | + | chr4.4:18357442-18357461 | MS.gene35000:intron | 45.0% | |
| AGCTCTCAAAGCAACCTACA+AGG | + | chr4.4:18356155-18356174 | MS.gene35000:CDS | 45.0% | |
| CCACAATATCCAAACTGGAC+AGG | + | chr4.4:18357943-18357962 | MS.gene35000:intron | 45.0% | |
| CCTGTCCAGTTTGGATATTG+TGG | - | chr4.4:18357946-18357965 | None:intergenic | 45.0% | |
| CTACTTCAACCTGTCCAGTT+TGG | - | chr4.4:18357955-18357974 | None:intergenic | 45.0% | |
| CTGAAACAAAGCCTCTACCA+AGG | - | chr4.4:18357469-18357488 | None:intergenic | 45.0% | |
| GAAATCGGAGTCGAATTCGT+CGG | - | chr4.4:18355751-18355770 | None:intergenic | 45.0% | |
| GAATGGCTTCTCTTTCAGCT+TGG | - | chr4.4:18356131-18356150 | None:intergenic | 45.0% | |
| GATGCTCAACTTGCGTCATT+TGG | + | chr4.4:18359177-18359196 | MS.gene35000:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr4.4:18357751-18357770 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr4.4:18357754-18357773 | None:intergenic | 45.0% | |
| GCTGTAAGAGCTATTGCATG+AGG | + | chr4.4:18359477-18359496 | MS.gene35000:intron | 45.0% | |
| GGTTGCCCTTACTTAGTTGT+GGG | - | chr4.4:18357684-18357703 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr4.4:18357820-18357839 | None:intergenic | 45.0% | |
| TACAGCTTGACGTGTAGAGT+TGG | - | chr4.4:18359463-18359482 | None:intergenic | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr4.4:18357819-18357838 | None:intergenic | 45.0% | |
| TCCAACAATAGTATGTGCCC+TGG | - | chr4.4:18359241-18359260 | None:intergenic | 45.0% | |
| TCCAGGGCACATACTATTGT+TGG | + | chr4.4:18359237-18359256 | MS.gene35000:intron | 45.0% | |
| TGAGGTTGAAGATGGCATGT+TGG | + | chr4.4:18358303-18358322 | MS.gene35000:intron | 45.0% | |
| TTCAGCTTGGCGAACAATGA+CGG | - | chr4.4:18356118-18356137 | None:intergenic | 45.0% | |
| ! | AACATCATGGTGGGGAAAAC+TGG | - | chr4.4:18359047-18359066 | None:intergenic | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4.4:18358467-18358486 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4.4:18358468-18358487 | None:intergenic | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr4.4:18357786-18357805 | MS.gene35000:intron | 45.0% |
| !! | AGATGAATTGTTCTGGGGTC+AGG | + | chr4.4:18355671-18355690 | MS.gene35000:CDS | 45.0% |
| !! | GGTAGAGGCTTTGTTTCAGA+TGG | + | chr4.4:18357470-18357489 | MS.gene35000:intron | 45.0% |
| !! | GAATTAATTAATTAATTAAT+CGG | - | chr4.4:18355811-18355830 | None:intergenic | 5.0% |
| ACATCCACATGATCGGTCCT+TGG | + | chr4.4:18359776-18359795 | MS.gene35000:CDS | 50.0% | |
| ATATCCTGGGAAGGCGACAT+TGG | + | chr4.4:18355939-18355958 | MS.gene35000:CDS | 50.0% | |
| CAAAGGAAGGACCTTGGTAG+AGG | + | chr4.4:18357455-18357474 | MS.gene35000:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr4.4:18357842-18357861 | MS.gene35000:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4.4:18358466-18358485 | MS.gene35000:intron | 50.0% | |
| CGCACATTCTTGAGACGTTG+TGG | - | chr4.4:18357235-18357254 | None:intergenic | 50.0% | |
| CTCTACCAAGGTCCTTCCTT+TGG | - | chr4.4:18357457-18357476 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr4.4:18358463-18358482 | None:intergenic | 50.0% | |
| GCGATTGGTATATCCTGGGA+AGG | + | chr4.4:18355930-18355949 | MS.gene35000:CDS | 50.0% | |
| GGGTTGCCCTTACTTAGTTG+TGG | - | chr4.4:18357685-18357704 | None:intergenic | 50.0% | |
| GGTACCGTGATCCAAAGACT+GGG | + | chr4.4:18358754-18358773 | MS.gene35000:intron | 50.0% | |
| GTCGAATTCGTCGGCGATTT+CGG | - | chr4.4:18355742-18355761 | None:intergenic | 50.0% | |
| GTGGGCATACTGAGATGGAT+AGG | + | chr4.4:18358131-18358150 | MS.gene35000:intron | 50.0% | |
| TATAGCCGACCCCACTTAGT+GGG | + | chr4.4:18358455-18358474 | MS.gene35000:intron | 50.0% | |
| TTATAGCCGACCCCACTTAG+TGG | + | chr4.4:18358454-18358473 | MS.gene35000:intron | 50.0% | |
| ! | AGGTACCGTGATCCAAAGAC+TGG | + | chr4.4:18358753-18358772 | MS.gene35000:intron | 50.0% |
| ! | ATTGGGTGAAGGCACATGCA+TGG | - | chr4.4:18359293-18359312 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4.4:18358469-18358488 | None:intergenic | 50.0% |
| ! | GCGAACAATGACGGAAGTTC+TGG | - | chr4.4:18356109-18356128 | None:intergenic | 50.0% |
| !! | TGCTTTGAGAGCTTCGCGAA+TGG | - | chr4.4:18356148-18356167 | None:intergenic | 50.0% |
| !! | TGGGTATTGAGGGGTAACCT+TGG | - | chr4.4:18357862-18357881 | None:intergenic | 50.0% |
| !!! | GGAGCGAGTTTTAGCTAGAG+AGG | + | chr4.4:18356999-18357018 | MS.gene35000:CDS | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr4.4:18357807-18357826 | None:intergenic | 55.0% | |
| CAACCAGGACGATGATGCCA+AGG | + | chr4.4:18356062-18356081 | MS.gene35000:CDS | 55.0% | |
| CACATGATCGGTCCTTGGCT+CGG | + | chr4.4:18359781-18359800 | MS.gene35000:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr4.4:18358461-18358480 | MS.gene35000:intron | 55.0% | |
| CGGCGATTTCGGCTTCTTCT+TGG | - | chr4.4:18355731-18355750 | None:intergenic | 55.0% | |
| GACGAGTGGGCATACTGAGA+TGG | + | chr4.4:18358126-18358145 | MS.gene35000:intron | 55.0% | |
| GAGTGGAGTATGGGACGAGT+GGG | + | chr4.4:18358113-18358132 | MS.gene35000:intron | 55.0% | |
| GCAGCCCAGTCTTTGGATCA+CGG | - | chr4.4:18358761-18358780 | None:intergenic | 55.0% | |
| GGCTGTTCTTCATCGGGTTC+AGG | - | chr4.4:18355877-18355896 | None:intergenic | 55.0% | |
| GGTCTGCAGTCATCCTCCTA+TGG | - | chr4.4:18359026-18359045 | None:intergenic | 55.0% | |
| TGAGTGGAGTATGGGACGAG+TGG | + | chr4.4:18358112-18358131 | MS.gene35000:intron | 55.0% | |
| TTAGCCAATGTCGCCTTCCC+AGG | - | chr4.4:18355946-18355965 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | + | chr4.4:18357710-18357729 | MS.gene35000:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr4.4:18357853-18357872 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr4.4:18357706-18357725 | None:intergenic | 60.0% | |
| CATACGCAGGGTCGAGGAAG+GGG | + | chr4.4:18357723-18357742 | MS.gene35000:intron | 60.0% | |
| CCAGGACGATGATGCCAAGG+AGG | + | chr4.4:18356065-18356084 | MS.gene35000:CDS | 60.0% | |
| CCTCCTTGGCATCATCGTCC+TGG | - | chr4.4:18356068-18356087 | None:intergenic | 60.0% | |
| CGAGCCAAGGACCGATCATG+TGG | - | chr4.4:18359783-18359802 | None:intergenic | 60.0% | |
| CGTGCATCTCGAGCGACAAG+AGG | + | chr4.4:18355609-18355628 | MS.gene35000:CDS | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | + | chr4.4:18357711-18357730 | MS.gene35000:intron | 60.0% | |
| CTTCCTCGACCCTGCGTATG+CGG | - | chr4.4:18357723-18357742 | None:intergenic | 60.0% | |
| GAGGAAGGGGTCCCACCATT+TGG | + | chr4.4:18357736-18357755 | MS.gene35000:intron | 60.0% | |
| GCATACGCAGGGTCGAGGAA+GGG | + | chr4.4:18357722-18357741 | MS.gene35000:intron | 60.0% | |
| GCGTATGGCAGCCCAGTCTT+TGG | - | chr4.4:18358768-18358787 | None:intergenic | 60.0% | |
| TTCCTCGACCCTGCGTATGC+GGG | - | chr4.4:18357722-18357741 | None:intergenic | 60.0% | |
| CGCATACGCAGGGTCGAGGA+AGG | + | chr4.4:18357721-18357740 | MS.gene35000:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr4.4:18357705-18357724 | None:intergenic | 65.0% | |
| CTCCCGCATACGCAGGGTCG+AGG | + | chr4.4:18357717-18357736 | MS.gene35000:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 18355555 | 18359845 | 18355555 | ID=MS.gene35000 |
| chr4.4 | mRNA | 18355555 | 18359845 | 18355555 | ID=MS.gene35000.t1;Parent=MS.gene35000 |
| chr4.4 | exon | 18355555 | 18355779 | 18355555 | ID=MS.gene35000.t1.exon1;Parent=MS.gene35000.t1 |
| chr4.4 | CDS | 18355555 | 18355779 | 18355555 | ID=cds.MS.gene35000.t1;Parent=MS.gene35000.t1 |
| chr4.4 | exon | 18355871 | 18356176 | 18355871 | ID=MS.gene35000.t1.exon2;Parent=MS.gene35000.t1 |
| chr4.4 | CDS | 18355871 | 18356176 | 18355871 | ID=cds.MS.gene35000.t1;Parent=MS.gene35000.t1 |
| chr4.4 | exon | 18356795 | 18356867 | 18356795 | ID=MS.gene35000.t1.exon3;Parent=MS.gene35000.t1 |
| chr4.4 | CDS | 18356795 | 18356867 | 18356795 | ID=cds.MS.gene35000.t1;Parent=MS.gene35000.t1 |
| chr4.4 | exon | 18356977 | 18357096 | 18356977 | ID=MS.gene35000.t1.exon4;Parent=MS.gene35000.t1 |
| chr4.4 | CDS | 18356977 | 18357096 | 18356977 | ID=cds.MS.gene35000.t1;Parent=MS.gene35000.t1 |
| chr4.4 | exon | 18357181 | 18357249 | 18357181 | ID=MS.gene35000.t1.exon5;Parent=MS.gene35000.t1 |
| chr4.4 | CDS | 18357181 | 18357249 | 18357181 | ID=cds.MS.gene35000.t1;Parent=MS.gene35000.t1 |
| chr4.4 | exon | 18358542 | 18358584 | 18358542 | ID=MS.gene35000.t1.exon6;Parent=MS.gene35000.t1 |
| chr4.4 | CDS | 18358542 | 18358584 | 18358542 | ID=cds.MS.gene35000.t1;Parent=MS.gene35000.t1 |
| chr4.4 | exon | 18358755 | 18358820 | 18358755 | ID=MS.gene35000.t1.exon7;Parent=MS.gene35000.t1 |
| chr4.4 | CDS | 18358755 | 18358820 | 18358755 | ID=cds.MS.gene35000.t1;Parent=MS.gene35000.t1 |
| chr4.4 | exon | 18359656 | 18359845 | 18359656 | ID=MS.gene35000.t1.exon8;Parent=MS.gene35000.t1 |
| chr4.4 | CDS | 18359656 | 18359845 | 18359656 | ID=cds.MS.gene35000.t1;Parent=MS.gene35000.t1 |
| Gene Sequence |
| Protein sequence |
