Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35030.t1 | XP_013457203.1 | 96.9 | 451 | 13 | 1 | 1 | 450 | 1 | 451 | 3.00E-242 | 847.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35030.t1 | Q7NXD4 | 33.4 | 290 | 163 | 8 | 84 | 364 | 5 | 273 | 3.7e-31 | 137.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35030.t1 | A0A072UN52 | 96.9 | 451 | 13 | 1 | 1 | 450 | 1 | 451 | 2.2e-242 | 847.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049255 | MS.gene35030 | 0.800847 | 1.19E-48 | -1.69E-46 |
| MS.gene049382 | MS.gene35030 | 0.814964 | 1.18E-51 | -1.69E-46 |
| MS.gene049756 | MS.gene35030 | 0.803042 | 4.21E-49 | -1.69E-46 |
| MS.gene050237 | MS.gene35030 | 0.80222 | 6.22E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene35030 | 0.824861 | 6.42E-54 | -1.69E-46 |
| MS.gene050689 | MS.gene35030 | 0.800175 | 1.63E-48 | -1.69E-46 |
| MS.gene050807 | MS.gene35030 | 0.804875 | 1.75E-49 | -1.69E-46 |
| MS.gene050987 | MS.gene35030 | 0.80473 | 1.88E-49 | -1.69E-46 |
| MS.gene051243 | MS.gene35030 | 0.840066 | 1.09E-57 | -1.69E-46 |
| MS.gene051245 | MS.gene35030 | 0.805909 | 1.06E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene35030 | 0.833758 | 4.44E-56 | -1.69E-46 |
| MS.gene051577 | MS.gene35030 | 0.810924 | 9.05E-51 | -1.69E-46 |
| MS.gene051789 | MS.gene35030 | 0.804556 | 2.04E-49 | -1.69E-46 |
| MS.gene052286 | MS.gene35030 | 0.804777 | 1.84E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene35030 | 0.810523 | 1.11E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene35030 | 0.802172 | 6.37E-49 | -1.69E-46 |
| MS.gene053216 | MS.gene35030 | 0.819657 | 1.04E-52 | -1.69E-46 |
| MS.gene053630 | MS.gene35030 | 0.808845 | 2.54E-50 | -1.69E-46 |
| MS.gene054657 | MS.gene35030 | 0.802005 | 6.89E-49 | -1.69E-46 |
| MS.gene054823 | MS.gene35030 | 0.81393 | 1.99E-51 | -1.69E-46 |
| MS.gene055441 | MS.gene35030 | 0.807741 | 4.36E-50 | -1.69E-46 |
| MS.gene056580 | MS.gene35030 | 0.8249 | 6.28E-54 | -1.69E-46 |
| MS.gene056760 | MS.gene35030 | 0.841892 | 3.61E-58 | -1.69E-46 |
| MS.gene057057 | MS.gene35030 | 0.811184 | 7.95E-51 | -1.69E-46 |
| MS.gene057140 | MS.gene35030 | 0.832467 | 9.30E-56 | -1.69E-46 |
| MS.gene057234 | MS.gene35030 | 0.81035 | 1.20E-50 | -1.69E-46 |
| MS.gene057451 | MS.gene35030 | -0.802536 | 5.36E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene35030 | 0.806474 | 8.08E-50 | -1.69E-46 |
| MS.gene058054 | MS.gene35030 | 0.802086 | 6.63E-49 | -1.69E-46 |
| MS.gene058055 | MS.gene35030 | 0.81775 | 2.80E-52 | -1.69E-46 |
| MS.gene058646 | MS.gene35030 | 0.813332 | 2.70E-51 | -1.69E-46 |
| MS.gene060297 | MS.gene35030 | 0.805778 | 1.13E-49 | -1.69E-46 |
| MS.gene060480 | MS.gene35030 | 0.801222 | 9.97E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35030.t1 | MTR_4g094258 | 98.226 | 451 | 7 | 1 | 1 | 450 | 1 | 451 | 0.0 | 914 |
| MS.gene35030.t1 | MTR_4g094258 | 91.796 | 451 | 6 | 2 | 1 | 450 | 1 | 421 | 0.0 | 833 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35030.t1 | AT2G13840 | 62.143 | 420 | 153 | 3 | 31 | 448 | 17 | 432 | 0.0 | 541 |
Find 107 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCTCTTGTTGATGATTT+TGG | 0.031208 | 4.4:+20732361 | MS.gene35030:CDS |
| CAAACCTTGTAATTGTTTCT+AGG | 0.169257 | 4.4:-20735577 | None:intergenic |
| TTGATCATTGTTTACCTCTT+TGG | 0.224468 | 4.4:+20735654 | MS.gene35030:CDS |
| AAAATCCTGTTGCTATTATT+AGG | 0.255436 | 4.4:+20734133 | MS.gene35030:CDS |
| CACTTCCCAGTTCAGATTCA+TGG | 0.274753 | 4.4:-20735442 | None:intergenic |
| CTATATGGTGCAATGCTATA+AGG | 0.299389 | 4.4:+20735513 | MS.gene35030:CDS |
| CAATGCTATAAGGGAATTAT+TGG | 0.306066 | 4.4:+20735523 | MS.gene35030:CDS |
| GATGACCCATGAACAAGTTT+TGG | 0.306632 | 4.4:+20732282 | MS.gene35030:CDS |
| CGGGCTACATGGAGCCTTCC+GGG | 0.310253 | 4.4:-20733856 | None:intergenic |
| GTAGAATCGGCTCGCAAATA+TGG | 0.314220 | 4.4:+20733136 | MS.gene35030:CDS |
| AAAAGTGATGGAAGGCTTGC+AGG | 0.316738 | 4.4:+20734195 | MS.gene35030:CDS |
| TTAAGGTAGCTAGGCCTATA+TGG | 0.320672 | 4.4:+20735498 | MS.gene35030:CDS |
| CTAGAAACAATTACAAGGTT+TGG | 0.330990 | 4.4:+20735578 | MS.gene35030:CDS |
| TGTAACTGAATGGGTTTCAT+TGG | 0.360755 | 4.4:+20732315 | MS.gene35030:CDS |
| TAAAAGCCAAAACTTGTTCA+TGG | 0.361148 | 4.4:-20732288 | None:intergenic |
| TAGAAACAATTACAAGGTTT+GGG | 0.368543 | 4.4:+20735579 | MS.gene35030:CDS |
| TTGCCGTTCTGGCTCATCCA+TGG | 0.379810 | 4.4:+20734103 | MS.gene35030:CDS |
| GAGCATGTTTGTAGGATTGC+AGG | 0.382471 | 4.4:+20733820 | MS.gene35030:CDS |
| TTCCAACGTTTCTACCAGTC+AGG | 0.399060 | 4.4:+20735730 | MS.gene35030:CDS |
| TTAGCATATTACAGCAGTAT+TGG | 0.401822 | 4.4:+20733682 | MS.gene35030:CDS |
| AGGACACCATGAATCTGAAC+TGG | 0.403868 | 4.4:+20735436 | MS.gene35030:CDS |
| AACCTCCTAATAATAGCAAC+AGG | 0.413958 | 4.4:-20734138 | None:intergenic |
| TAATATGCTAAAACGTGAAC+AGG | 0.417023 | 4.4:-20733670 | None:intergenic |
| TTAAATGGGAGCATGTTTGT+AGG | 0.422997 | 4.4:+20733812 | MS.gene35030:CDS |
| TTAAAAGAAGCAGGCCTTCA+TGG | 0.425114 | 4.4:+20734159 | MS.gene35030:CDS |
| CTTATAGCATTGCACCATAT+AGG | 0.426022 | 4.4:-20735512 | None:intergenic |
| CAATTCAAACAAGAGCAATA+AGG | 0.426821 | 4.4:+20732210 | MS.gene35030:CDS |
| GATGGAAAATGAAGAGTTTG+AGG | 0.430917 | 4.4:+20735691 | MS.gene35030:CDS |
| ACGGGCTACATGGAGCCTTC+CGG | 0.436221 | 4.4:-20733857 | None:intergenic |
| GATGAAGTAGCGAAAGGAGA+AGG | 0.437413 | 4.4:-20732343 | None:intergenic |
| CAAATCCTTTCCACAATACA+AGG | 0.438699 | 4.4:-20735630 | None:intergenic |
| TATATGGTGCAATGCTATAA+GGG | 0.441866 | 4.4:+20735514 | MS.gene35030:CDS |
| TTCTAAGTCTCTATGAGAAC+CGG | 0.445315 | 4.4:-20735761 | None:intergenic |
| AAGTCATGCAAAACTAGTAC+TGG | 0.451309 | 4.4:-20735473 | None:intergenic |
| CAACCATAGCACGGGCTACA+TGG | 0.457224 | 4.4:-20733867 | None:intergenic |
| CGAGCCGATTCTACAGCCTC+GGG | 0.458504 | 4.4:-20733127 | None:intergenic |
| GCTCTCTCAACAACCTTAGA+AGG | 0.460070 | 4.4:-20732469 | None:intergenic |
| TCTGACAGATCACGATACTA+TGG | 0.460637 | 4.4:+20733096 | MS.gene35030:CDS |
| TGCCGTTCTGGCTCATCCAT+GGG | 0.473635 | 4.4:+20734104 | MS.gene35030:CDS |
| CATCCCCGAGGCTGTAGAAT+CGG | 0.477174 | 4.4:+20733123 | MS.gene35030:CDS |
| ATGACTTTCTTAAGGTAGCT+AGG | 0.478259 | 4.4:+20735489 | MS.gene35030:CDS |
| ATGAAGTAGCGAAAGGAGAA+GGG | 0.480967 | 4.4:-20732342 | None:intergenic |
| ATTAGGAGGTTAAAAGAAGC+AGG | 0.481000 | 4.4:+20734150 | MS.gene35030:CDS |
| TTTATTGCTTCCTCCACCAC+AGG | 0.488429 | 4.4:-20734057 | None:intergenic |
| AACCGGAGTTCCTCCCTGAC+TGG | 0.502354 | 4.4:-20735744 | None:intergenic |
| AAAAGCCAAAACTTGTTCAT+GGG | 0.503915 | 4.4:-20732287 | None:intergenic |
| TAAAACTTACGCCGTTCATG+TGG | 0.507053 | 4.4:-20732492 | None:intergenic |
| CTCAATCCAGTTATGGGAGA+TGG | 0.507268 | 4.4:+20732166 | None:intergenic |
| TTGGTTAAGTAGCCAAGAGA+TGG | 0.514042 | 4.4:+20735673 | MS.gene35030:CDS |
| TATTGGACCATCAAAATTTG+AGG | 0.515732 | 4.4:+20733699 | MS.gene35030:CDS |
| GGGAAGTGAACCTGTGGTGG+AGG | 0.520171 | 4.4:+20734047 | MS.gene35030:CDS |
| TGTAGACCTCCATCCCATGA+AGG | 0.525586 | 4.4:-20734173 | None:intergenic |
| TAAAAGAAGCAGGCCTTCAT+GGG | 0.526089 | 4.4:+20734160 | MS.gene35030:CDS |
| TTCACCCTTGTATTGTGGAA+AGG | 0.529199 | 4.4:+20735625 | MS.gene35030:CDS |
| ATTGGAGGGTCAGACTATCA+TGG | 0.530154 | 4.4:+20735407 | MS.gene35030:CDS |
| GCGAGCCGATTCTACAGCCT+CGG | 0.530385 | 4.4:-20733128 | None:intergenic |
| GCCCGTGCTATGGTTGAAGC+AGG | 0.533657 | 4.4:+20733874 | MS.gene35030:CDS |
| GCTCCATGTAGCCCGTGCTA+TGG | 0.537065 | 4.4:+20733864 | MS.gene35030:CDS |
| AACGTTGGAAAGCTTCAACT+TGG | 0.537287 | 4.4:-20735717 | None:intergenic |
| CAGGGGAAGTGAACCTGTGG+TGG | 0.538470 | 4.4:+20734044 | MS.gene35030:intron |
| TACCAGTCAGGGAGGAACTC+CGG | 0.543925 | 4.4:+20735742 | MS.gene35030:CDS |
| AGAAGCAGGCCTTCATGGGA+TGG | 0.546814 | 4.4:+20734164 | MS.gene35030:CDS |
| GGAGGTTCACCCTTGTATTG+TGG | 0.547408 | 4.4:+20735620 | MS.gene35030:CDS |
| AAGAAGAATAAGAACAGAGG+TGG | 0.548356 | 4.4:+20732247 | MS.gene35030:CDS |
| CTAACCTAGAAACAATTACA+AGG | 0.549045 | 4.4:+20735573 | MS.gene35030:CDS |
| GTTAGTATTAGACGGTTCCT+CGG | 0.549211 | 4.4:-20735555 | None:intergenic |
| ATCCTGTTGCTATTATTAGG+AGG | 0.550357 | 4.4:+20734136 | MS.gene35030:CDS |
| GCAGGCAACGGAGTTGCTCC+CGG | 0.551611 | 4.4:+20733838 | MS.gene35030:CDS |
| ATTGTACTAACTTCAACACC+TGG | 0.552254 | 4.4:-20733172 | None:intergenic |
| GTTTCTAGGTTAGTATTAGA+CGG | 0.556827 | 4.4:-20735563 | None:intergenic |
| CAATATTACTTGGAGTAAGC+AGG | 0.557337 | 4.4:-20733949 | None:intergenic |
| GGGTCAGACTATCATGGAAG+AGG | 0.560598 | 4.4:+20735413 | MS.gene35030:CDS |
| AAGAAGAAGAATAAGAACAG+AGG | 0.572930 | 4.4:+20732244 | MS.gene35030:CDS |
| ATGGAGGTCTACAAAAGTGA+TGG | 0.578050 | 4.4:+20734183 | MS.gene35030:CDS |
| TCCCTGACTGGTAGAAACGT+TGG | 0.579843 | 4.4:-20735732 | None:intergenic |
| ACCTGCTTCAACCATAGCAC+GGG | 0.581188 | 4.4:-20733875 | None:intergenic |
| AACCTGCTTCAACCATAGCA+CGG | 0.582016 | 4.4:-20733876 | None:intergenic |
| TTTGGGGTGCAGAAGCCTGT+TGG | 0.583868 | 4.4:+20732379 | MS.gene35030:CDS |
| GTTTGTAGGATTGCAGGCAA+CGG | 0.584225 | 4.4:+20733826 | MS.gene35030:CDS |
| TCCAACGTTTCTACCAGTCA+GGG | 0.584764 | 4.4:+20735731 | MS.gene35030:CDS |
| TATGGCATTAAGATAATCCC+AGG | 0.585730 | 4.4:+20733154 | MS.gene35030:CDS |
| GTTGAGAGAGCCCACATGAA+CGG | 0.586954 | 4.4:+20732481 | MS.gene35030:CDS |
| AGTGACCTGGCTGATGCCTA+CGG | 0.590587 | 4.4:+20735374 | MS.gene35030:CDS |
| TGTCACTCTAAATGCAGTGA+TGG | 0.597504 | 4.4:+20732436 | MS.gene35030:CDS |
| TGCCCATGGATGAGCCAGAA+CGG | 0.598033 | 4.4:-20734106 | None:intergenic |
| ACAGATCACGATACTATGGC+AGG | 0.600390 | 4.4:+20733100 | MS.gene35030:CDS |
| GCAACGGAGTTGCTCCCGGA+AGG | 0.600663 | 4.4:+20733842 | MS.gene35030:CDS |
| ACAAGAGATGAAGTAGCGAA+AGG | 0.606592 | 4.4:-20732349 | None:intergenic |
| AAAGGCCGTAGGCATCAGCC+AGG | 0.611891 | 4.4:-20735379 | None:intergenic |
| AGCAGGCCTTCATGGGATGG+AGG | 0.629146 | 4.4:+20734167 | MS.gene35030:CDS |
| TCAGACTATCATGGAAGAGG+AGG | 0.633037 | 4.4:+20735416 | MS.gene35030:CDS |
| TGGTGGAGACACTGAAGCAG+AGG | 0.633552 | 4.4:+20733645 | MS.gene35030:CDS |
| CATGCAAAACTAGTACTGGA+AGG | 0.634426 | 4.4:-20735469 | None:intergenic |
| ATTATTGGAGTGTTATGCCG+AGG | 0.638655 | 4.4:+20735538 | MS.gene35030:CDS |
| AGGTCTACAAAAGTGATGGA+AGG | 0.642912 | 4.4:+20734187 | MS.gene35030:CDS |
| TTGTACTAACTTCAACACCT+GGG | 0.643477 | 4.4:-20733171 | None:intergenic |
| TCTTGGCTACTTAACCAAAG+AGG | 0.654559 | 4.4:-20735668 | None:intergenic |
| AAAACTTACGCCGTTCATGT+GGG | 0.655200 | 4.4:-20732491 | None:intergenic |
| TTATCTTCGAGCAAAGAACA+TGG | 0.660434 | 4.4:+20733759 | MS.gene35030:CDS |
| TTTCAGGGGAAGTGAACCTG+TGG | 0.661634 | 4.4:+20734041 | MS.gene35030:intron |
| GTATGCAGCATATAGTGACC+TGG | 0.671490 | 4.4:+20735361 | MS.gene35030:intron |
| GGACACCATGAATCTGAACT+GGG | 0.676928 | 4.4:+20735437 | MS.gene35030:CDS |
| AAATCCTTTCCACAATACAA+GGG | 0.689638 | 4.4:-20735629 | None:intergenic |
| TACTATGGCAGGCATCCCCG+AGG | 0.703124 | 4.4:+20733111 | MS.gene35030:CDS |
| AACGTTTCTACCAGTCAGGG+AGG | 0.703221 | 4.4:+20735734 | MS.gene35030:CDS |
| GAGCCGATTCTACAGCCTCG+GGG | 0.740138 | 4.4:-20733126 | None:intergenic |
| AAAATGATTTGTGATACTGG+GGG | 0.788482 | 4.4:+20734078 | MS.gene35030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATGGTTATTATTTTATA+AGG | + | chr4.4:20732852-20732871 | MS.gene35030:intron | 10.0% |
| !!! | ATTTTTGTTTGAATTATTTA+AGG | + | chr4.4:20732558-20732577 | MS.gene35030:intron | 10.0% |
| !! | AATATGTAATGAATATAAGA+AGG | - | chr4.4:20732732-20732751 | None:intergenic | 15.0% |
| !! | TTAATTAGAATCAATTATGA+AGG | + | chr4.4:20733507-20733526 | MS.gene35030:intron | 15.0% |
| !!! | ATTTTTCTTAACTACAAAAA+TGG | - | chr4.4:20734004-20734023 | None:intergenic | 15.0% |
| !!! | ATTTTTGTAGTTAAGAAAAA+TGG | + | chr4.4:20734003-20734022 | MS.gene35030:intron | 15.0% |
| !!! | ATTTTTTATGTTTCCAAAAT+CGG | - | chr4.4:20735109-20735128 | None:intergenic | 15.0% |
| !!! | TACAGTTTTTTTGTTTTATT+TGG | - | chr4.4:20732614-20732633 | None:intergenic | 15.0% |
| !!! | TTTTAAATTTGTAACTGAAT+GGG | + | chr4.4:20732306-20732325 | MS.gene35030:CDS | 15.0% |
| !!! | AATTAACTTGAACTTGAAAT+TGG | - | chr4.4:20733493-20733512 | None:intergenic | 20.0% |
| !!! | ATAAAAATGATTTGTGATAC+TGG | + | chr4.4:20734075-20734094 | MS.gene35030:CDS | 20.0% |
| !!! | ATAAGTTTTTGTCAAACATA+AGG | + | chr4.4:20733728-20733747 | MS.gene35030:CDS | 20.0% |
| !!! | CATAAAAAATCGTTATTTTG+CGG | + | chr4.4:20735119-20735138 | MS.gene35030:intron | 20.0% |
| !!! | CTTTTAAATTTGTAACTGAA+TGG | + | chr4.4:20732305-20732324 | MS.gene35030:CDS | 20.0% |
| !!! | TAAAAATGATTTGTGATACT+GGG | + | chr4.4:20734076-20734095 | MS.gene35030:CDS | 20.0% |
| !!! | TAAGTTTTTGTCAAACATAA+GGG | + | chr4.4:20733729-20733748 | MS.gene35030:CDS | 20.0% |
| !!! | TATTTTGAATGAATCAATTC+TGG | + | chr4.4:20733356-20733375 | MS.gene35030:intron | 20.0% |
| !!! | TTAGTACAATATTTTATCCA+AGG | + | chr4.4:20733185-20733204 | MS.gene35030:CDS | 20.0% |
| ! | AAAGCTTAACAAGCTAAAAA+TGG | + | chr4.4:20733786-20733805 | MS.gene35030:CDS | 25.0% |
| ! | AAGCGATAATATTCAATACT+CGG | + | chr4.4:20734993-20735012 | MS.gene35030:intron | 25.0% |
| ! | AATCACTGTGATTTCATATA+TGG | - | chr4.4:20734897-20734916 | None:intergenic | 25.0% |
| ! | AATCGTCACTAAACAAAATT+GGG | + | chr4.4:20734569-20734588 | MS.gene35030:intron | 25.0% |
| ! | AGGATAATGAAGTCAATTTA+AGG | + | chr4.4:20732872-20732891 | MS.gene35030:intron | 25.0% |
| ! | ATGCGTTACAATCTAAATTA+CGG | + | chr4.4:20732756-20732775 | MS.gene35030:intron | 25.0% |
| ! | CTTAAGTTTGAAAATTACCT+TGG | - | chr4.4:20733205-20733224 | None:intergenic | 25.0% |
| ! | GGATGATAATTAGATTTGAT+GGG | + | chr4.4:20734770-20734789 | MS.gene35030:intron | 25.0% |
| ! | TAATGAAGTCAATTTAAGGA+TGG | + | chr4.4:20732876-20732895 | MS.gene35030:intron | 25.0% |
| ! | TAGAAACAATTACAAGGTTT+GGG | + | chr4.4:20735579-20735598 | MS.gene35030:CDS | 25.0% |
| ! | TCACTAAATCTTACAATTTG+AGG | - | chr4.4:20734455-20734474 | None:intergenic | 25.0% |
| ! | TCTCATAAAAACCAAAACTA+AGG | + | chr4.4:20734276-20734295 | MS.gene35030:intron | 25.0% |
| ! | TGGATGATAATTAGATTTGA+TGG | + | chr4.4:20734769-20734788 | MS.gene35030:intron | 25.0% |
| !! | AAAAATGATTTGTGATACTG+GGG | + | chr4.4:20734077-20734096 | MS.gene35030:CDS | 25.0% |
| !! | AAAATCCTGTTGCTATTATT+AGG | + | chr4.4:20734133-20734152 | MS.gene35030:CDS | 25.0% |
| !! | AAGAAAACTACCATTTGTTA+TGG | - | chr4.4:20734713-20734732 | None:intergenic | 25.0% |
| !! | ATTGATTTCCTTTGTAGTTT+AGG | + | chr4.4:20733021-20733040 | MS.gene35030:intron | 25.0% |
| !! | CAATTGATTTAGTGTATGTT+TGG | - | chr4.4:20733569-20733588 | None:intergenic | 25.0% |
| !! | TGTGCATCATTTTATGATTA+TGG | + | chr4.4:20732836-20732855 | MS.gene35030:intron | 25.0% |
| !! | TTAAGCATCTTGTATTTTCA+GGG | + | chr4.4:20734026-20734045 | MS.gene35030:intron | 25.0% |
| !! | TTCCAATGAATTCTAAAAGA+TGG | + | chr4.4:20732968-20732987 | MS.gene35030:intron | 25.0% |
| !!! | AACCATCTTTTAGAATTCAT+TGG | - | chr4.4:20732973-20732992 | None:intergenic | 25.0% |
| !!! | CGATATAATAGTTTTAAACC+TGG | + | chr4.4:20734523-20734542 | MS.gene35030:intron | 25.0% |
| !!! | TGATCTTGCTTGTTAATTTT+TGG | + | chr4.4:20735339-20735358 | MS.gene35030:intron | 25.0% |
| !!! | TTTTGTTTTTTGATTGTCGT+AGG | + | chr4.4:20732522-20732541 | MS.gene35030:intron | 25.0% |
| AAATCCTTTCCACAATACAA+GGG | - | chr4.4:20735632-20735651 | None:intergenic | 30.0% | |
| AACACTTAAAATCGTGGTTA+AGG | + | chr4.4:20732648-20732667 | MS.gene35030:intron | 30.0% | |
| AAGAAGAAGAATAAGAACAG+AGG | + | chr4.4:20732244-20732263 | MS.gene35030:CDS | 30.0% | |
| AATATTCAATACTCGGAATC+AGG | + | chr4.4:20735000-20735019 | MS.gene35030:intron | 30.0% | |
| ACTTTGTCAATTGTCATACA+AGG | + | chr4.4:20734306-20734325 | MS.gene35030:intron | 30.0% | |
| AGAACCAATGGAGAAAAAAA+AGG | - | chr4.4:20733602-20733621 | None:intergenic | 30.0% | |
| AGCTAAAAATGGCTCTTAAA+TGG | + | chr4.4:20733797-20733816 | MS.gene35030:CDS | 30.0% | |
| ATATTCAATACTCGGAATCA+GGG | + | chr4.4:20735001-20735020 | MS.gene35030:intron | 30.0% | |
| ATCAAAAAGATATCGAGCAA+AGG | - | chr4.4:20733923-20733942 | None:intergenic | 30.0% | |
| ATCGCTTCACTAATATGATT+AGG | - | chr4.4:20734980-20734999 | None:intergenic | 30.0% | |
| CAATCGTCACTAAACAAAAT+TGG | + | chr4.4:20734568-20734587 | MS.gene35030:intron | 30.0% | |
| CAATGCTATAAGGGAATTAT+TGG | + | chr4.4:20735523-20735542 | MS.gene35030:CDS | 30.0% | |
| CAATTCAAACAAGAGCAATA+AGG | + | chr4.4:20732210-20732229 | MS.gene35030:CDS | 30.0% | |
| CAATTCTGGTATAAATGAGT+TGG | + | chr4.4:20733370-20733389 | MS.gene35030:intron | 30.0% | |
| CATAAAAACCAAAACTAAGG+TGG | + | chr4.4:20734279-20734298 | MS.gene35030:intron | 30.0% | |
| CTAACCTAGAAACAATTACA+AGG | + | chr4.4:20735573-20735592 | MS.gene35030:CDS | 30.0% | |
| CTAGAAACAATTACAAGGTT+TGG | + | chr4.4:20735578-20735597 | MS.gene35030:CDS | 30.0% | |
| GAAAGTTAACTGTATTGTAG+AGG | + | chr4.4:20732910-20732929 | MS.gene35030:intron | 30.0% | |
| GCTAAAAATGGCTCTTAAAT+GGG | + | chr4.4:20733798-20733817 | MS.gene35030:CDS | 30.0% | |
| GGACACATTTACATAAAAGT+AGG | + | chr4.4:20733413-20733432 | MS.gene35030:intron | 30.0% | |
| TAATATGCTAAAACGTGAAC+AGG | - | chr4.4:20733673-20733692 | None:intergenic | 30.0% | |
| TATATGGTGCAATGCTATAA+GGG | + | chr4.4:20735514-20735533 | MS.gene35030:CDS | 30.0% | |
| TATTGGACCATCAAAATTTG+AGG | + | chr4.4:20733699-20733718 | MS.gene35030:CDS | 30.0% | |
| TGTGATGTTATCAAATCATC+AGG | + | chr4.4:20734400-20734419 | MS.gene35030:intron | 30.0% | |
| TGTTACCATTTGTTCATAAC+AGG | + | chr4.4:20733060-20733079 | MS.gene35030:intron | 30.0% | |
| TGTTGTCACAATTGTGTAAT+AGG | + | chr4.4:20735272-20735291 | MS.gene35030:intron | 30.0% | |
| TTAGCATATTACAGCAGTAT+TGG | + | chr4.4:20733682-20733701 | MS.gene35030:CDS | 30.0% | |
| TTGATCATTGTTTACCTCTT+TGG | + | chr4.4:20735654-20735673 | MS.gene35030:CDS | 30.0% | |
| TTTCACCTGTTATGAACAAA+TGG | - | chr4.4:20733068-20733087 | None:intergenic | 30.0% | |
| TTTGATATTGCAATGAAACG+TGG | + | chr4.4:20735068-20735087 | MS.gene35030:intron | 30.0% | |
| ! | AAAAGCCAAAACTTGTTCAT+GGG | - | chr4.4:20732290-20732309 | None:intergenic | 30.0% |
| ! | AAAATGATTTGTGATACTGG+GGG | + | chr4.4:20734078-20734097 | MS.gene35030:CDS | 30.0% |
| ! | AGTTTTGCATGACTTTCTTA+AGG | + | chr4.4:20735481-20735500 | MS.gene35030:CDS | 30.0% |
| ! | CAAACCTTGTAATTGTTTCT+AGG | - | chr4.4:20735580-20735599 | None:intergenic | 30.0% |
| ! | GTTAAGCATCTTGTATTTTC+AGG | + | chr4.4:20734025-20734044 | MS.gene35030:intron | 30.0% |
| ! | GTTTCTAGGTTAGTATTAGA+CGG | - | chr4.4:20735566-20735585 | None:intergenic | 30.0% |
| ! | TAAAAGCCAAAACTTGTTCA+TGG | - | chr4.4:20732291-20732310 | None:intergenic | 30.0% |
| ! | TAAATGAGTTGGATGTAATG+TGG | + | chr4.4:20733381-20733400 | MS.gene35030:intron | 30.0% |
| ! | TAAGCATCTTGTATTTTCAG+GGG | + | chr4.4:20734027-20734046 | MS.gene35030:intron | 30.0% |
| ! | TAGGTTGAACGATAAATTTG+AGG | + | chr4.4:20733432-20733451 | MS.gene35030:intron | 30.0% |
| ! | TTCTAAAAGATGGTTGTCTA+AGG | + | chr4.4:20732978-20732997 | MS.gene35030:intron | 30.0% |
| ! | TTGATGCTTGTTGATTGAAT+TGG | + | chr4.4:20733229-20733248 | MS.gene35030:intron | 30.0% |
| ! | TTTGCTCGATATCTTTTTGA+TGG | + | chr4.4:20733922-20733941 | MS.gene35030:CDS | 30.0% |
| ! | TTTTTGTCAAACATAAGGGA+CGG | + | chr4.4:20733733-20733752 | MS.gene35030:CDS | 30.0% |
| !!! | AAGTCCTTTTTTTTCTCCAT+TGG | + | chr4.4:20733595-20733614 | MS.gene35030:intron | 30.0% |
| !!! | ATCTCTTGTTGATGATTTTG+GGG | + | chr4.4:20732363-20732382 | MS.gene35030:CDS | 30.0% |
| !!! | CATCTCTTGTTGATGATTTT+GGG | + | chr4.4:20732362-20732381 | MS.gene35030:CDS | 30.0% |
| !!! | TCATCTCTTGTTGATGATTT+TGG | + | chr4.4:20732361-20732380 | MS.gene35030:CDS | 30.0% |
| AAAACGAGCCTAAACTACAA+AGG | - | chr4.4:20733032-20733051 | None:intergenic | 35.0% | |
| AAAATCGGATGTTACTGCAT+TGG | - | chr4.4:20735094-20735113 | None:intergenic | 35.0% | |
| AACCTCCTAATAATAGCAAC+AGG | - | chr4.4:20734141-20734160 | None:intergenic | 35.0% | |
| AAGAAGAATAAGAACAGAGG+TGG | + | chr4.4:20732247-20732266 | MS.gene35030:CDS | 35.0% | |
| AAGTCAATTTAAGGATGGTG+TGG | + | chr4.4:20732881-20732900 | MS.gene35030:intron | 35.0% | |
| AAGTCATGCAAAACTAGTAC+TGG | - | chr4.4:20735476-20735495 | None:intergenic | 35.0% | |
| ACAACACAATGAGATGTAGT+AGG | - | chr4.4:20735258-20735277 | None:intergenic | 35.0% | |
| AGCTTGAACACTTAAAATCG+TGG | + | chr4.4:20732642-20732661 | MS.gene35030:intron | 35.0% | |
| AGGCTGAAATTCAATTGTAG+AGG | + | chr4.4:20733452-20733471 | MS.gene35030:intron | 35.0% | |
| ATAACAAGTGAAGTGATGCA+TGG | + | chr4.4:20734496-20734515 | MS.gene35030:intron | 35.0% | |
| ATCATCCAATGTCCACAAAA+AGG | - | chr4.4:20734757-20734776 | None:intergenic | 35.0% | |
| ATCTAGCAATCAACAAGTGA+AGG | - | chr4.4:20733980-20733999 | None:intergenic | 35.0% | |
| ATGACTTTCTTAAGGTAGCT+AGG | + | chr4.4:20735489-20735508 | MS.gene35030:CDS | 35.0% | |
| ATTAGGAGGTTAAAAGAAGC+AGG | + | chr4.4:20734150-20734169 | MS.gene35030:CDS | 35.0% | |
| ATTGTACTAACTTCAACACC+TGG | - | chr4.4:20733175-20733194 | None:intergenic | 35.0% | |
| CAAATCCTTTCCACAATACA+AGG | - | chr4.4:20735633-20735652 | None:intergenic | 35.0% | |
| CAATATTACTTGGAGTAAGC+AGG | - | chr4.4:20733952-20733971 | None:intergenic | 35.0% | |
| CCTCTGAATACAATTAACCA+CGG | - | chr4.4:20732684-20732703 | None:intergenic | 35.0% | |
| CTATATGGTGCAATGCTATA+AGG | + | chr4.4:20735513-20735532 | MS.gene35030:CDS | 35.0% | |
| CTTATAGCATTGCACCATAT+AGG | - | chr4.4:20735515-20735534 | None:intergenic | 35.0% | |
| CTTCATACAGTCTCTTTATG+TGG | - | chr4.4:20734856-20734875 | None:intergenic | 35.0% | |
| GATGGAAAATGAAGAGTTTG+AGG | + | chr4.4:20735691-20735710 | MS.gene35030:CDS | 35.0% | |
| GATGTAATGTGGTTTATGTC+TGG | + | chr4.4:20733392-20733411 | MS.gene35030:intron | 35.0% | |
| GCACATATTTCAAAGAGTTG+TGG | - | chr4.4:20732821-20732840 | None:intergenic | 35.0% | |
| TAATTGTCCAAGTGCATGTT+TGG | + | chr4.4:20733314-20733333 | MS.gene35030:intron | 35.0% | |
| TATGGCATTAAGATAATCCC+AGG | + | chr4.4:20733154-20733173 | MS.gene35030:CDS | 35.0% | |
| TCTGTGTCTTCCATAACAAA+TGG | + | chr4.4:20734700-20734719 | MS.gene35030:intron | 35.0% | |
| TGTTCGTTTATGACTAGACA+TGG | - | chr4.4:20735196-20735215 | None:intergenic | 35.0% | |
| TTATCTTCGAGCAAAGAACA+TGG | + | chr4.4:20733759-20733778 | MS.gene35030:CDS | 35.0% | |
| TTGTACTAACTTCAACACCT+GGG | - | chr4.4:20733174-20733193 | None:intergenic | 35.0% | |
| ! | AAGTAGATCCACCTTAGTTT+TGG | - | chr4.4:20734290-20734309 | None:intergenic | 35.0% |
| ! | AATGCAGTAACATCCGATTT+TGG | + | chr4.4:20735093-20735112 | MS.gene35030:intron | 35.0% |
| ! | ACTCTTCATTTTCCATCTCT+TGG | - | chr4.4:20735688-20735707 | None:intergenic | 35.0% |
| ! | ATCCTGTTGCTATTATTAGG+AGG | + | chr4.4:20734136-20734155 | MS.gene35030:CDS | 35.0% |
| ! | GGTTATTACGTAAGTGTTGT+GGG | - | chr4.4:20734658-20734677 | None:intergenic | 35.0% |
| ! | TGGTTATTACGTAAGTGTTG+TGG | - | chr4.4:20734659-20734678 | None:intergenic | 35.0% |
| ! | TGTAACTGAATGGGTTTCAT+TGG | + | chr4.4:20732315-20732334 | MS.gene35030:CDS | 35.0% |
| ! | TGTTGATTGAATTGGCACTT+TGG | + | chr4.4:20733237-20733256 | MS.gene35030:intron | 35.0% |
| ! | TTAAATGGGAGCATGTTTGT+AGG | + | chr4.4:20733812-20733831 | MS.gene35030:CDS | 35.0% |
| !! | TAAGCTGTTTTGTCATTTCC+AGG | - | chr4.4:20734544-20734563 | None:intergenic | 35.0% |
| !! | TCTAGCTCCTCAAATTTTGA+TGG | - | chr4.4:20733709-20733728 | None:intergenic | 35.0% |
| !!! | ACAGGATTTTTTAATGCCCA+TGG | - | chr4.4:20734123-20734142 | None:intergenic | 35.0% |
| !!! | ATGTTTGGTTCCACTTTTTG+AGG | - | chr4.4:20733554-20733573 | None:intergenic | 35.0% |
| !!! | TCCATCTCCACTTATTTTAG+AGG | - | chr4.4:20732936-20732955 | None:intergenic | 35.0% |
| !!! | TCGGAATCAGGGTTTTAAAT+GGG | + | chr4.4:20735012-20735031 | MS.gene35030:intron | 35.0% |
| AAAACTTACGCCGTTCATGT+GGG | - | chr4.4:20732494-20732513 | None:intergenic | 40.0% | |
| AAAGAGACTGTATGAAGCCT+AGG | + | chr4.4:20734859-20734878 | MS.gene35030:intron | 40.0% | |
| AACGTTGGAAAGCTTCAACT+TGG | - | chr4.4:20735720-20735739 | None:intergenic | 40.0% | |
| ACAAGAGATGAAGTAGCGAA+AGG | - | chr4.4:20732352-20732371 | None:intergenic | 40.0% | |
| ATCATGGGATGAATAGCAGA+TGG | - | chr4.4:20734943-20734962 | None:intergenic | 40.0% | |
| ATCCAATGTCCACAAAAAGG+TGG | - | chr4.4:20734754-20734773 | None:intergenic | 40.0% | |
| ATGAAGTAGCGAAAGGAGAA+GGG | - | chr4.4:20732345-20732364 | None:intergenic | 40.0% | |
| ATGGAGGTCTACAAAAGTGA+TGG | + | chr4.4:20734183-20734202 | MS.gene35030:CDS | 40.0% | |
| CAGAAGCCTGTTGGAAAAAA+TGG | + | chr4.4:20732388-20732407 | MS.gene35030:CDS | 40.0% | |
| CCGTGGTTAATTGTATTCAG+AGG | + | chr4.4:20732681-20732700 | MS.gene35030:intron | 40.0% | |
| CTACTTACCTCCTCAAAAAG+TGG | + | chr4.4:20733541-20733560 | MS.gene35030:intron | 40.0% | |
| CTGCTATTCATCCCATGATA+TGG | + | chr4.4:20734944-20734963 | MS.gene35030:intron | 40.0% | |
| GAAGGCAACGCAATATTACT+TGG | - | chr4.4:20733962-20733981 | None:intergenic | 40.0% | |
| GAGATGTAGTAGGCAGTATT+CGG | - | chr4.4:20735248-20735267 | None:intergenic | 40.0% | |
| GGAAGACACAGAATAATGAC+TGG | - | chr4.4:20734692-20734711 | None:intergenic | 40.0% | |
| GTCTCTTTATGTGGATCAGA+AGG | - | chr4.4:20734847-20734866 | None:intergenic | 40.0% | |
| GTGAACCTCCCTTAAAAATG+CGG | - | chr4.4:20735610-20735629 | None:intergenic | 40.0% | |
| GTTAGTATTAGACGGTTCCT+CGG | - | chr4.4:20735558-20735577 | None:intergenic | 40.0% | |
| TAAAACTTACGCCGTTCATG+TGG | - | chr4.4:20732495-20732514 | None:intergenic | 40.0% | |
| TAAAAGAAGCAGGCCTTCAT+GGG | + | chr4.4:20734160-20734179 | MS.gene35030:CDS | 40.0% | |
| TAATGACTGGTGCATTCACT+TGG | - | chr4.4:20734679-20734698 | None:intergenic | 40.0% | |
| TCCAATGTCCACAAAAAGGT+GGG | - | chr4.4:20734753-20734772 | None:intergenic | 40.0% | |
| TCTGACAGATCACGATACTA+TGG | + | chr4.4:20733096-20733115 | MS.gene35030:CDS | 40.0% | |
| TCTTGGCTACTTAACCAAAG+AGG | - | chr4.4:20735671-20735690 | None:intergenic | 40.0% | |
| TGAACCTCCCTTAAAAATGC+GGG | - | chr4.4:20735609-20735628 | None:intergenic | 40.0% | |
| TGTAGAACCAAACATGCACT+TGG | - | chr4.4:20733324-20733343 | None:intergenic | 40.0% | |
| TGTCACTCTAAATGCAGTGA+TGG | + | chr4.4:20732436-20732455 | MS.gene35030:CDS | 40.0% | |
| TTAAAAGAAGCAGGCCTTCA+TGG | + | chr4.4:20734159-20734178 | MS.gene35030:CDS | 40.0% | |
| TTAAGGTAGCTAGGCCTATA+TGG | + | chr4.4:20735498-20735517 | MS.gene35030:CDS | 40.0% | |
| TTCACCCTTGTATTGTGGAA+AGG | + | chr4.4:20735625-20735644 | MS.gene35030:CDS | 40.0% | |
| TTGGTTAAGTAGCCAAGAGA+TGG | + | chr4.4:20735673-20735692 | MS.gene35030:CDS | 40.0% | |
| ! | AGGTCTACAAAAGTGATGGA+AGG | + | chr4.4:20734187-20734206 | MS.gene35030:CDS | 40.0% |
| ! | ATTATTGGAGTGTTATGCCG+AGG | + | chr4.4:20735538-20735557 | MS.gene35030:CDS | 40.0% |
| ! | CATGCAAAACTAGTACTGGA+AGG | - | chr4.4:20735472-20735491 | None:intergenic | 40.0% |
| ! | CTGACCCTCCAATTTTCAAA+AGG | - | chr4.4:20735400-20735419 | None:intergenic | 40.0% |
| ! | GATGACCCATGAACAAGTTT+TGG | + | chr4.4:20732282-20732301 | MS.gene35030:CDS | 40.0% |
| ! | GCTCGATATCTTTTTGATGG+TGG | + | chr4.4:20733925-20733944 | MS.gene35030:CDS | 40.0% |
| ! | GTTAAGGACGTTTAAAACCG+TGG | + | chr4.4:20732664-20732683 | MS.gene35030:intron | 40.0% |
| ! | TCCAATTTTCAAAAGGCCGT+AGG | - | chr4.4:20735393-20735412 | None:intergenic | 40.0% |
| ! | TGGCTTTTTGTCTCCTTCTA+AGG | + | chr4.4:20732456-20732475 | MS.gene35030:CDS | 40.0% |
| !! | AAGTGCATGTTTGGTTCTAC+AGG | + | chr4.4:20733323-20733342 | MS.gene35030:intron | 40.0% |
| !! | ACGGCCTTTTGAAAATTGGA+GGG | + | chr4.4:20735393-20735412 | MS.gene35030:CDS | 40.0% |
| !! | AGTGCATGTTTGGTTCTACA+GGG | + | chr4.4:20733324-20733343 | MS.gene35030:intron | 40.0% |
| !! | GCAAGAAGCATCCATATCAT+GGG | - | chr4.4:20734958-20734977 | None:intergenic | 40.0% |
| !! | GCCTCTAAAATAAGTGGAGA+TGG | + | chr4.4:20732932-20732951 | MS.gene35030:intron | 40.0% |
| !! | GTAGAGGCCTCTAAAATAAG+TGG | + | chr4.4:20732926-20732945 | MS.gene35030:intron | 40.0% |
| !! | TACGGCCTTTTGAAAATTGG+AGG | + | chr4.4:20735392-20735411 | MS.gene35030:CDS | 40.0% |
| !!! | CGGAATCAGGGTTTTAAATG+GGG | + | chr4.4:20735013-20735032 | MS.gene35030:intron | 40.0% |
| !!! | CTCGGAATCAGGGTTTTAAA+TGG | + | chr4.4:20735011-20735030 | MS.gene35030:intron | 40.0% |
| !!! | CTGTCACCATTTTTTCCAAC+AGG | - | chr4.4:20732397-20732416 | None:intergenic | 40.0% |
| !!! | GGAATCAGGGTTTTAAATGG+GGG | + | chr4.4:20735014-20735033 | MS.gene35030:intron | 40.0% |
| !!! | TTTGGTTCCACTTTTTGAGG+AGG | - | chr4.4:20733551-20733570 | None:intergenic | 40.0% |
| AACCTGCTTCAACCATAGCA+CGG | - | chr4.4:20733879-20733898 | None:intergenic | 45.0% | |
| ACAGATCACGATACTATGGC+AGG | + | chr4.4:20733100-20733119 | MS.gene35030:CDS | 45.0% | |
| AGGACACCATGAATCTGAAC+TGG | + | chr4.4:20735436-20735455 | MS.gene35030:CDS | 45.0% | |
| ATTGGAGGGTCAGACTATCA+TGG | + | chr4.4:20735407-20735426 | MS.gene35030:CDS | 45.0% | |
| CACTTCCCAGTTCAGATTCA+TGG | - | chr4.4:20735445-20735464 | None:intergenic | 45.0% | |
| CCAATGTCCACAAAAAGGTG+GGG | - | chr4.4:20734752-20734771 | None:intergenic | 45.0% | |
| CTTGTGTTGCCTCTAACTAG+AGG | + | chr4.4:20733264-20733283 | MS.gene35030:intron | 45.0% | |
| GAGCATGTTTGTAGGATTGC+AGG | + | chr4.4:20733820-20733839 | MS.gene35030:CDS | 45.0% | |
| GATGAAGTAGCGAAAGGAGA+AGG | - | chr4.4:20732346-20732365 | None:intergenic | 45.0% | |
| GCTCTCTCAACAACCTTAGA+AGG | - | chr4.4:20732472-20732491 | None:intergenic | 45.0% | |
| GGACACCATGAATCTGAACT+GGG | + | chr4.4:20735437-20735456 | MS.gene35030:CDS | 45.0% | |
| GTATGCAGCATATAGTGACC+TGG | + | chr4.4:20735361-20735380 | MS.gene35030:intron | 45.0% | |
| GTTTGTAGGATTGCAGGCAA+CGG | + | chr4.4:20733826-20733845 | MS.gene35030:CDS | 45.0% | |
| TATGGTCAACCACTAAGCCT+AGG | - | chr4.4:20734879-20734898 | None:intergenic | 45.0% | |
| TCAGACTATCATGGAAGAGG+AGG | + | chr4.4:20735416-20735435 | MS.gene35030:CDS | 45.0% | |
| TCCAACGTTTCTACCAGTCA+GGG | + | chr4.4:20735731-20735750 | MS.gene35030:CDS | 45.0% | |
| TCTGATGTTTGCCCATCTAC+TGG | + | chr4.4:20733619-20733638 | MS.gene35030:intron | 45.0% | |
| TGGGCAAACATCAGAACCAA+TGG | - | chr4.4:20733614-20733633 | None:intergenic | 45.0% | |
| TGTATGAAGCCTAGGCTTAG+TGG | + | chr4.4:20734867-20734886 | MS.gene35030:intron | 45.0% | |
| TGTTGCCTCTAACTAGAGGA+GGG | + | chr4.4:20733268-20733287 | MS.gene35030:intron | 45.0% | |
| TTCCAACGTTTCTACCAGTC+AGG | + | chr4.4:20735730-20735749 | MS.gene35030:CDS | 45.0% | |
| TTTAAGGATGGTGTGGCTGA+TGG | + | chr4.4:20732888-20732907 | MS.gene35030:intron | 45.0% | |
| TTTATTGCTTCCTCCACCAC+AGG | - | chr4.4:20734060-20734079 | None:intergenic | 45.0% | |
| ! | AAAAGTGATGGAAGGCTTGC+AGG | + | chr4.4:20734195-20734214 | MS.gene35030:CDS | 45.0% |
| ! | GGGAGAACCCGCATTTTTAA+GGG | + | chr4.4:20735599-20735618 | MS.gene35030:CDS | 45.0% |
| ! | TGGGAGAACCCGCATTTTTA+AGG | + | chr4.4:20735598-20735617 | MS.gene35030:CDS | 45.0% |
| !! | AGAACCCGCATTTTTAAGGG+AGG | + | chr4.4:20735602-20735621 | MS.gene35030:CDS | 45.0% |
| !! | ATGGTTAGCCTCTATCTCAC+CGG | - | chr4.4:20735177-20735196 | None:intergenic | 45.0% |
| !! | GCCTACGGCCTTTTGAAAAT+TGG | + | chr4.4:20735389-20735408 | MS.gene35030:CDS | 45.0% |
| !! | GGCAAGAAGCATCCATATCA+TGG | - | chr4.4:20734959-20734978 | None:intergenic | 45.0% |
| !! | GTAGAATCGGCTCGCAAATA+TGG | + | chr4.4:20733136-20733155 | MS.gene35030:CDS | 45.0% |
| AACGTTTCTACCAGTCAGGG+AGG | + | chr4.4:20735734-20735753 | MS.gene35030:CDS | 50.0% | |
| ACCTGCTTCAACCATAGCAC+GGG | - | chr4.4:20733878-20733897 | None:intergenic | 50.0% | |
| ACTCATCACTACCGCCAACT+TGG | + | chr4.4:20735146-20735165 | MS.gene35030:intron | 50.0% | |
| CTCATCACTACCGCCAACTT+GGG | + | chr4.4:20735147-20735166 | MS.gene35030:intron | 50.0% | |
| GGAGGTTCACCCTTGTATTG+TGG | + | chr4.4:20735620-20735639 | MS.gene35030:CDS | 50.0% | |
| GGGTCAGACTATCATGGAAG+AGG | + | chr4.4:20735413-20735432 | MS.gene35030:CDS | 50.0% | |
| GTGTTGCCTCTAACTAGAGG+AGG | + | chr4.4:20733267-20733286 | MS.gene35030:intron | 50.0% | |
| GTTGAGAGAGCCCACATGAA+CGG | + | chr4.4:20732481-20732500 | MS.gene35030:CDS | 50.0% | |
| GTTGCCTCTAACTAGAGGAG+GGG | + | chr4.4:20733269-20733288 | MS.gene35030:intron | 50.0% | |
| TCCCTGACTGGTAGAAACGT+TGG | - | chr4.4:20735735-20735754 | None:intergenic | 50.0% | |
| TGTAGACCTCCATCCCATGA+AGG | - | chr4.4:20734176-20734195 | None:intergenic | 50.0% | |
| TTGCCTCTAACTAGAGGAGG+GGG | + | chr4.4:20733270-20733289 | MS.gene35030:intron | 50.0% | |
| TTTCAGGGGAAGTGAACCTG+TGG | + | chr4.4:20734041-20734060 | MS.gene35030:intron | 50.0% | |
| ! | CCCCACCTTTTTGTGGACAT+TGG | + | chr4.4:20734749-20734768 | MS.gene35030:intron | 50.0% |
| ! | TGCACTACCCCACCTTTTTG+TGG | + | chr4.4:20734742-20734761 | MS.gene35030:intron | 50.0% |
| AGAAGCAGGCCTTCATGGGA+TGG | + | chr4.4:20734164-20734183 | MS.gene35030:CDS | 55.0% | |
| AGTGACCTGGCTGATGCCTA+CGG | + | chr4.4:20735374-20735393 | MS.gene35030:CDS | 55.0% | |
| CATCCCCGAGGCTGTAGAAT+CGG | + | chr4.4:20733123-20733142 | MS.gene35030:CDS | 55.0% | |
| CTCCACCACTGCCAGTAGAT+GGG | - | chr4.4:20733633-20733652 | None:intergenic | 55.0% | |
| GTTTGCCCATCTACTGGCAG+TGG | + | chr4.4:20733625-20733644 | MS.gene35030:intron | 55.0% | |
| TACCAGTCAGGGAGGAACTC+CGG | + | chr4.4:20735742-20735761 | MS.gene35030:CDS | 55.0% | |
| TCTCCACCACTGCCAGTAGA+TGG | - | chr4.4:20733634-20733653 | None:intergenic | 55.0% | |
| TGCCCATGGATGAGCCAGAA+CGG | - | chr4.4:20734109-20734128 | None:intergenic | 55.0% | |
| TGCCTCTAACTAGAGGAGGG+GGG | + | chr4.4:20733271-20733290 | MS.gene35030:intron | 55.0% | |
| TGGTGGAGACACTGAAGCAG+AGG | + | chr4.4:20733645-20733664 | MS.gene35030:CDS | 55.0% | |
| TTCCCCCCTCCTCTAGTTAG+AGG | - | chr4.4:20733276-20733295 | None:intergenic | 55.0% | |
| ! | CAACCATAGCACGGGCTACA+TGG | - | chr4.4:20733870-20733889 | None:intergenic | 55.0% |
| ! | TTTGGGGTGCAGAAGCCTGT+TGG | + | chr4.4:20732379-20732398 | MS.gene35030:CDS | 55.0% |
| !! | TGCCGTTCTGGCTCATCCAT+GGG | + | chr4.4:20734104-20734123 | MS.gene35030:CDS | 55.0% |
| !! | TTGCCGTTCTGGCTCATCCA+TGG | + | chr4.4:20734103-20734122 | MS.gene35030:CDS | 55.0% |
| AAAGGCCGTAGGCATCAGCC+AGG | - | chr4.4:20735382-20735401 | None:intergenic | 60.0% | |
| AACCGGAGTTCCTCCCTGAC+TGG | - | chr4.4:20735747-20735766 | None:intergenic | 60.0% | |
| AGCAGGCCTTCATGGGATGG+AGG | + | chr4.4:20734167-20734186 | MS.gene35030:CDS | 60.0% | |
| CAGGGGAAGTGAACCTGTGG+TGG | + | chr4.4:20734044-20734063 | MS.gene35030:intron | 60.0% | |
| GCCCGTGCTATGGTTGAAGC+AGG | + | chr4.4:20733874-20733893 | MS.gene35030:CDS | 60.0% | |
| GCTCCATGTAGCCCGTGCTA+TGG | + | chr4.4:20733864-20733883 | MS.gene35030:CDS | 60.0% | |
| GGGAAGTGAACCTGTGGTGG+AGG | + | chr4.4:20734047-20734066 | MS.gene35030:CDS | 60.0% | |
| TACTATGGCAGGCATCCCCG+AGG | + | chr4.4:20733111-20733130 | MS.gene35030:CDS | 60.0% | |
| TGCCCATCTACTGGCAGTGG+TGG | + | chr4.4:20733628-20733647 | MS.gene35030:intron | 60.0% | |
| ! | ACGGGCTACATGGAGCCTTC+CGG | - | chr4.4:20733860-20733879 | None:intergenic | 60.0% |
| ! | CGAGCCGATTCTACAGCCTC+GGG | - | chr4.4:20733130-20733149 | None:intergenic | 60.0% |
| ! | GAGCCGATTCTACAGCCTCG+GGG | - | chr4.4:20733129-20733148 | None:intergenic | 60.0% |
| ! | GCGAGCCGATTCTACAGCCT+CGG | - | chr4.4:20733131-20733150 | None:intergenic | 60.0% |
| ! | TCTCACCGGCTAGCCCAAGT+TGG | - | chr4.4:20735163-20735182 | None:intergenic | 60.0% |
| !! | TACCGCCAACTTGGGCTAGC+CGG | + | chr4.4:20735155-20735174 | MS.gene35030:intron | 60.0% |
| !! | TACTGGGGGTGTTGCCGTTC+TGG | + | chr4.4:20734092-20734111 | MS.gene35030:CDS | 60.0% |
| !! | TGGGCTAGCCGGTGAGATAG+AGG | + | chr4.4:20735166-20735185 | MS.gene35030:intron | 60.0% |
| CGGGCTACATGGAGCCTTCC+GGG | - | chr4.4:20733859-20733878 | None:intergenic | 65.0% | |
| GCAACGGAGTTGCTCCCGGA+AGG | + | chr4.4:20733842-20733861 | MS.gene35030:CDS | 65.0% | |
| GCAGGCAACGGAGTTGCTCC+CGG | + | chr4.4:20733838-20733857 | MS.gene35030:CDS | 65.0% | |
| ! | CACCGGCTAGCCCAAGTTGG+CGG | - | chr4.4:20735160-20735179 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 20732178 | 20735781 | 20732178 | ID=MS.gene35030 |
| chr4.4 | mRNA | 20732178 | 20735781 | 20732178 | ID=MS.gene35030.t1;Parent=MS.gene35030 |
| chr4.4 | exon | 20732178 | 20732504 | 20732178 | ID=MS.gene35030.t1.exon1;Parent=MS.gene35030.t1 |
| chr4.4 | CDS | 20732178 | 20732504 | 20732178 | ID=cds.MS.gene35030.t1;Parent=MS.gene35030.t1 |
| chr4.4 | exon | 20733082 | 20733206 | 20733082 | ID=MS.gene35030.t1.exon2;Parent=MS.gene35030.t1 |
| chr4.4 | CDS | 20733082 | 20733206 | 20733082 | ID=cds.MS.gene35030.t1;Parent=MS.gene35030.t1 |
| chr4.4 | exon | 20733645 | 20733962 | 20733645 | ID=MS.gene35030.t1.exon3;Parent=MS.gene35030.t1 |
| chr4.4 | CDS | 20733645 | 20733962 | 20733645 | ID=cds.MS.gene35030.t1;Parent=MS.gene35030.t1 |
| chr4.4 | exon | 20734047 | 20734216 | 20734047 | ID=MS.gene35030.t1.exon4;Parent=MS.gene35030.t1 |
| chr4.4 | CDS | 20734047 | 20734216 | 20734047 | ID=cds.MS.gene35030.t1;Parent=MS.gene35030.t1 |
| chr4.4 | exon | 20735369 | 20735781 | 20735369 | ID=MS.gene35030.t1.exon5;Parent=MS.gene35030.t1 |
| chr4.4 | CDS | 20735369 | 20735781 | 20735369 | ID=cds.MS.gene35030.t1;Parent=MS.gene35030.t1 |
| Gene Sequence |
| Protein sequence |
