Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35622.t1 | XP_013460839.1 | 98.9 | 659 | 7 | 0 | 1 | 659 | 1 | 659 | 0.00E+00 | 1254.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35622.t1 | Q9FEP7 | 75.9 | 656 | 153 | 4 | 1 | 655 | 1 | 652 | 7.7e-280 | 964.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35622.t1 | A0A072V0K2 | 98.9 | 659 | 7 | 0 | 1 | 659 | 1 | 659 | 0.0e+00 | 1254.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene35622 | MS.gene57599 | PPI |
| MS.gene35622 | MS.gene010268 | PPI |
| MS.gene35622 | MS.gene33361 | PPI |
| MS.gene29852 | MS.gene35622 | PPI |
| MS.gene35622 | MS.gene33360 | PPI |
| MS.gene35622 | MS.gene89102 | PPI |
| MS.gene35622 | MS.gene33359 | PPI |
| MS.gene053673 | MS.gene35622 | PPI |
| MS.gene35622 | MS.gene053674 | PPI |
| MS.gene35622 | MS.gene61200 | PPI |
| MS.gene35622 | MS.gene062785 | PPI |
| MS.gene35622 | MS.gene29013 | PPI |
| MS.gene35622 | MS.gene36287 | PPI |
| MS.gene35622 | MS.gene30731 | PPI |
| MS.gene35622 | MS.gene035937 | PPI |
| MS.gene35622 | MS.gene033981 | PPI |
| MS.gene35622 | MS.gene010265 | PPI |
| MS.gene35622 | MS.gene29852 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35622.t1 | MTR_3g073780 | 98.938 | 659 | 7 | 0 | 1 | 659 | 1 | 659 | 0.0 | 1333 |
| MS.gene35622.t1 | MTR_3g073780 | 99.147 | 586 | 5 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1186 |
| MS.gene35622.t1 | MTR_5g061880 | 84.018 | 657 | 102 | 2 | 4 | 659 | 1 | 655 | 0.0 | 1136 |
| MS.gene35622.t1 | MTR_3g073780 | 99.106 | 559 | 5 | 0 | 1 | 559 | 1 | 559 | 0.0 | 1127 |
| MS.gene35622.t1 | MTR_2g008470 | 70.128 | 626 | 183 | 3 | 30 | 654 | 51 | 673 | 0.0 | 902 |
| MS.gene35622.t1 | MTR_2g008470 | 70.128 | 626 | 183 | 3 | 30 | 654 | 32 | 654 | 0.0 | 901 |
| MS.gene35622.t1 | MTR_1g071530 | 53.096 | 646 | 291 | 4 | 23 | 659 | 3 | 645 | 0.0 | 696 |
| MS.gene35622.t1 | MTR_7g095430 | 52.335 | 621 | 292 | 3 | 33 | 652 | 18 | 635 | 0.0 | 694 |
| MS.gene35622.t1 | MTR_2g102243 | 53.344 | 628 | 289 | 3 | 33 | 659 | 23 | 647 | 0.0 | 694 |
| MS.gene35622.t1 | MTR_4g084620 | 51.411 | 638 | 304 | 5 | 17 | 652 | 1 | 634 | 0.0 | 683 |
| MS.gene35622.t1 | MTR_3g087740 | 53.704 | 648 | 278 | 9 | 11 | 651 | 17 | 649 | 0.0 | 679 |
| MS.gene35622.t1 | MTR_5g061860 | 54.327 | 624 | 269 | 6 | 38 | 651 | 29 | 646 | 0.0 | 678 |
| MS.gene35622.t1 | MTR_4g011970 | 51.823 | 631 | 294 | 4 | 33 | 659 | 30 | 654 | 0.0 | 675 |
| MS.gene35622.t1 | MTR_4g084640 | 50.230 | 651 | 316 | 4 | 9 | 659 | 2 | 644 | 0.0 | 669 |
| MS.gene35622.t1 | MTR_3g073730 | 51.314 | 647 | 290 | 5 | 13 | 651 | 23 | 652 | 0.0 | 664 |
| MS.gene35622.t1 | MTR_7g095430 | 53.514 | 555 | 254 | 3 | 33 | 586 | 18 | 569 | 0.0 | 637 |
| MS.gene35622.t1 | MTR_2g102243 | 54.595 | 555 | 248 | 3 | 33 | 586 | 23 | 574 | 0.0 | 635 |
| MS.gene35622.t1 | MTR_5g061860 | 57.331 | 532 | 212 | 6 | 38 | 559 | 28 | 554 | 0.0 | 608 |
| MS.gene35622.t1 | MTR_6g086170 | 43.680 | 625 | 345 | 4 | 28 | 651 | 5 | 623 | 0.0 | 572 |
| MS.gene35622.t1 | MTR_3g087730 | 41.014 | 651 | 356 | 9 | 9 | 648 | 16 | 649 | 1.86e-173 | 510 |
| MS.gene35622.t1 | MTR_7g022870 | 39.446 | 578 | 336 | 7 | 77 | 651 | 70 | 636 | 1.65e-137 | 419 |
| MS.gene35622.t1 | MTR_7g022870 | 40.351 | 513 | 292 | 7 | 77 | 586 | 70 | 571 | 3.40e-122 | 375 |
| MS.gene35622.t1 | MTR_6g024420 | 48.182 | 110 | 38 | 3 | 260 | 369 | 76 | 166 | 2.41e-24 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35622.t1 | AT1G22150 | 75.915 | 656 | 153 | 4 | 1 | 655 | 1 | 652 | 0.0 | 983 |
| MS.gene35622.t1 | AT1G22150 | 75.915 | 656 | 153 | 4 | 1 | 655 | 1 | 652 | 0.0 | 983 |
| MS.gene35622.t1 | AT1G22150 | 75.915 | 656 | 153 | 4 | 1 | 655 | 1 | 652 | 0.0 | 983 |
| MS.gene35622.t1 | AT1G78000 | 77.352 | 627 | 139 | 2 | 30 | 655 | 25 | 649 | 0.0 | 947 |
| MS.gene35622.t1 | AT1G78000 | 77.352 | 627 | 139 | 2 | 30 | 655 | 25 | 649 | 0.0 | 947 |
| MS.gene35622.t1 | AT1G78000 | 77.352 | 627 | 139 | 2 | 30 | 655 | 25 | 649 | 0.0 | 947 |
| MS.gene35622.t1 | AT4G08620 | 71.589 | 623 | 174 | 2 | 34 | 655 | 24 | 644 | 0.0 | 910 |
| MS.gene35622.t1 | AT1G78000 | 78.462 | 585 | 123 | 2 | 30 | 613 | 25 | 607 | 0.0 | 892 |
| MS.gene35622.t1 | AT1G22150 | 77.002 | 587 | 130 | 4 | 1 | 586 | 1 | 583 | 0.0 | 884 |
| MS.gene35622.t1 | AT1G78000 | 78.853 | 558 | 115 | 2 | 30 | 586 | 25 | 580 | 0.0 | 848 |
| MS.gene35622.t1 | AT1G78000 | 78.481 | 474 | 100 | 1 | 29 | 502 | 24 | 495 | 0.0 | 712 |
| MS.gene35622.t1 | AT3G51895 | 53.215 | 622 | 286 | 4 | 33 | 652 | 65 | 683 | 0.0 | 704 |
| MS.gene35622.t1 | AT3G51895 | 53.215 | 622 | 286 | 4 | 33 | 652 | 20 | 638 | 0.0 | 702 |
| MS.gene35622.t1 | AT3G15990 | 51.675 | 627 | 299 | 3 | 33 | 658 | 27 | 650 | 0.0 | 687 |
| MS.gene35622.t1 | AT1G78000 | 80.984 | 447 | 82 | 2 | 141 | 586 | 1 | 445 | 0.0 | 673 |
| MS.gene35622.t1 | AT5G10180 | 53.333 | 630 | 284 | 6 | 27 | 651 | 48 | 672 | 0.0 | 660 |
| MS.gene35622.t1 | AT1G23090 | 50.641 | 624 | 303 | 4 | 33 | 654 | 4 | 624 | 0.0 | 657 |
| MS.gene35622.t1 | AT4G02700 | 49.114 | 621 | 311 | 4 | 33 | 651 | 10 | 627 | 0.0 | 627 |
| MS.gene35622.t1 | AT1G77990 | 48.476 | 656 | 323 | 6 | 6 | 648 | 10 | 663 | 0.0 | 620 |
| MS.gene35622.t1 | AT5G19600 | 42.543 | 637 | 347 | 7 | 19 | 651 | 2 | 623 | 0.0 | 537 |
| MS.gene35622.t1 | AT1G23090 | 49.899 | 495 | 243 | 4 | 162 | 654 | 1 | 492 | 3.92e-174 | 506 |
| MS.gene35622.t1 | AT1G23090 | 49.899 | 495 | 243 | 4 | 162 | 654 | 1 | 492 | 3.92e-174 | 506 |
| MS.gene35622.t1 | AT1G23090 | 49.899 | 495 | 243 | 4 | 162 | 654 | 1 | 492 | 3.92e-174 | 506 |
| MS.gene35622.t1 | AT3G12520 | 38.581 | 578 | 341 | 7 | 77 | 651 | 47 | 613 | 1.25e-132 | 405 |
| MS.gene35622.t1 | AT3G12520 | 38.581 | 578 | 341 | 7 | 77 | 651 | 63 | 629 | 1.67e-132 | 405 |
| MS.gene35622.t1 | AT5G13550 | 37.688 | 597 | 358 | 7 | 58 | 651 | 57 | 642 | 1.87e-129 | 397 |
| MS.gene35622.t1 | AT3G12520 | 39.463 | 484 | 281 | 6 | 77 | 559 | 63 | 535 | 4.27e-112 | 348 |
Find 110 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGCCAAGAACTGCTATTT+TGG | 0.159336 | 3.3:+63754842 | MS.gene35622:CDS |
| CAAACTTTACACATCAAATT+TGG | 0.194351 | 3.3:+63755527 | MS.gene35622:CDS |
| TTAATGTCATACAATAAATT+TGG | 0.204828 | 3.3:-63753286 | None:intergenic |
| GCTTGCATGGGAGCATTCTT+TGG | 0.233187 | 3.3:+63754386 | MS.gene35622:CDS |
| TCAAATTTGGCTAACATAAT+TGG | 0.235564 | 3.3:+63755540 | MS.gene35622:CDS |
| TCATATTCCCTATACTTAAC+TGG | 0.244415 | 3.3:+63752187 | MS.gene35622:CDS |
| CTTGCATGGGAGCATTCTTT+GGG | 0.248132 | 3.3:+63754387 | MS.gene35622:CDS |
| GGCAGTGGTTTCTCTCTTGT+TGG | 0.266819 | 3.3:+63752599 | MS.gene35622:CDS |
| CTTGTTTGAGCAGCTTGTTC+TGG | 0.272068 | 3.3:+63755479 | MS.gene35622:intron |
| TTCCCCAAAATAGCAGTTCT+TGG | 0.283487 | 3.3:-63754846 | None:intergenic |
| ACCACTTATTTATGCTTTCA+TGG | 0.312166 | 3.3:+63752545 | MS.gene35622:CDS |
| TGGTTTGGAAAATAGGATAT+TGG | 0.313803 | 3.3:+63752364 | MS.gene35622:intron |
| TCCTTGAATAAATTCTGTTT+TGG | 0.314696 | 3.3:-63752066 | None:intergenic |
| TATTCTTCTGCATGCGTAAC+AGG | 0.316301 | 3.3:-63752648 | None:intergenic |
| GCAGTGGTTTCTCTCTTGTT+GGG | 0.317370 | 3.3:+63752600 | MS.gene35622:CDS |
| CATCAGTCTTGTGGACTATC+AGG | 0.327508 | 3.3:+63754322 | MS.gene35622:CDS |
| TTGGCCTTGTCACTTGTAAT+AGG | 0.331619 | 3.3:-63754827 | None:intergenic |
| CTATCCCATGCTGCTATTGT+CGG | 0.334142 | 3.3:+63752892 | MS.gene35622:CDS |
| TTACCTTTCTTTAACATAGT+TGG | 0.339689 | 3.3:-63754976 | None:intergenic |
| ATACTCTAAGCTTGCACATT+TGG | 0.342714 | 3.3:+63752387 | MS.gene35622:CDS |
| TACTAGCTTCTGTGTATTGT+TGG | 0.347401 | 3.3:-63754899 | None:intergenic |
| CATGGGTTCACATCTAGCTT+TGG | 0.355433 | 3.3:-63755612 | None:intergenic |
| GATATCAATGGGGCAATTGC+TGG | 0.356023 | 3.3:-63753423 | None:intergenic |
| AGAAGAACAAGAAATTCTTC+TGG | 0.361674 | 3.3:+63753397 | MS.gene35622:CDS |
| TCCTTTCAGGTTCTTTCTCT+CGG | 0.370793 | 3.3:+63754153 | MS.gene35622:intron |
| ATGAAGGATTATCAATTAGA+TGG | 0.377902 | 3.3:+63753866 | MS.gene35622:CDS |
| TGGTCTTTGAAAGATCTTAG+AGG | 0.380869 | 3.3:-63752129 | None:intergenic |
| GCACATTTGGCACCACAGTA+TGG | 0.381293 | 3.3:+63752400 | MS.gene35622:CDS |
| ATTGCAACTTTGTAAGCATA+TGG | 0.407177 | 3.3:-63752039 | None:intergenic |
| TCCAAAACAGAATTTATTCA+AGG | 0.407770 | 3.3:+63752065 | MS.gene35622:CDS |
| CAGCTTGTTCTGGCAAATCC+TGG | 0.413117 | 3.3:+63755489 | MS.gene35622:intron |
| TTCTGCTGTCATCAGTCTTG+TGG | 0.413682 | 3.3:+63754313 | MS.gene35622:CDS |
| TGATATTATCTCCGTGTTGA+AGG | 0.418696 | 3.3:+63753002 | MS.gene35622:CDS |
| AACTGGCAAACTATATTAAT+CGG | 0.422167 | 3.3:+63753234 | MS.gene35622:CDS |
| TTTAAAATTGGCGTCATGGC+AGG | 0.425028 | 3.3:+63753700 | MS.gene35622:CDS |
| ACAGAAGCTAGTAAGGTTCC+AGG | 0.431458 | 3.3:+63754909 | MS.gene35622:CDS |
| GAGAGAGCATACCCCATGTT+TGG | 0.437367 | 3.3:-63753040 | None:intergenic |
| TAAATTTCATGAACAGATGA+AGG | 0.439342 | 3.3:-63753649 | None:intergenic |
| ACAATACAACTGATATCAAT+GGG | 0.439415 | 3.3:-63753434 | None:intergenic |
| CAACAGCTAAAGGGTTTCCT+TGG | 0.439994 | 3.3:+63752949 | MS.gene35622:CDS |
| GGGATTACACAAGCAACTCT+TGG | 0.440824 | 3.3:+63752705 | MS.gene35622:CDS |
| AATTGCCCTTCAACAGCTAA+AGG | 0.441884 | 3.3:+63752939 | MS.gene35622:CDS |
| GAAGAACAAGAAATTCTTCT+GGG | 0.444848 | 3.3:+63753398 | MS.gene35622:CDS |
| AAGAACATTTGCATCTATGA+AGG | 0.450445 | 3.3:+63753850 | MS.gene35622:CDS |
| GGAAACCCTTTAGCTGTTGA+AGG | 0.451418 | 3.3:-63752945 | None:intergenic |
| TTCTTTAACATAGTTGGAGT+TGG | 0.452253 | 3.3:-63754970 | None:intergenic |
| AATGATGATGGCGGCGAGAA+TGG | 0.456380 | 3.3:-63754291 | None:intergenic |
| ACTTCTTGTTATGTGGCAAC+TGG | 0.456644 | 3.3:+63753938 | MS.gene35622:CDS |
| TTTGGCTAACATAATTGGTC+AGG | 0.456815 | 3.3:+63755545 | MS.gene35622:CDS |
| ATTGCCCTTCAACAGCTAAA+GGG | 0.458365 | 3.3:+63752940 | MS.gene35622:CDS |
| TGCAAGTCTTTGCATACCTC+AGG | 0.461632 | 3.3:+63752266 | MS.gene35622:CDS |
| CAGTGGTTTCTCTCTTGTTG+GGG | 0.462873 | 3.3:+63752601 | MS.gene35622:CDS |
| AAGGTAAATCACATAGAGAA+AGG | 0.464306 | 3.3:+63753619 | MS.gene35622:intron |
| ATGGCGGCGAGAATGGCATT+TGG | 0.465915 | 3.3:-63754284 | None:intergenic |
| ACAATACACAGAAGCTAGTA+AGG | 0.466966 | 3.3:+63754902 | MS.gene35622:CDS |
| AGTTCTCGCGATATAGCAAT+AGG | 0.473447 | 3.3:+63752570 | MS.gene35622:CDS |
| CGACAATAGCAGCATGGGAT+AGG | 0.479296 | 3.3:-63752891 | None:intergenic |
| CAATATTAGAGACTGCAGTT+TGG | 0.479467 | 3.3:-63754202 | None:intergenic |
| GGATTACACAAGCAACTCTT+GGG | 0.490943 | 3.3:+63752706 | MS.gene35622:CDS |
| ATTAGATGGAAACAGAGAAA+TGG | 0.491879 | 3.3:+63753880 | MS.gene35622:CDS |
| CATATTCCCTATACTTAACT+GGG | 0.493178 | 3.3:+63752188 | MS.gene35622:CDS |
| TTGTCTGTATCTTTATCAGT+TGG | 0.493507 | 3.3:-63751970 | None:intergenic |
| TTATCAGTTGGAGAATCCAT+TGG | 0.494298 | 3.3:-63751958 | None:intergenic |
| GACAATACAACTGATATCAA+TGG | 0.494922 | 3.3:-63753435 | None:intergenic |
| TTGTCTGTCACTGCTGAACC+AGG | 0.503392 | 3.3:-63755507 | None:intergenic |
| CCACTTATTTATGCTTTCAT+GGG | 0.515118 | 3.3:+63752546 | MS.gene35622:CDS |
| ACTCCAACTATGTTAAAGAA+AGG | 0.519136 | 3.3:+63754973 | MS.gene35622:CDS |
| TTCGATGACTTCTTGTTATG+TGG | 0.520745 | 3.3:+63753931 | MS.gene35622:CDS |
| AAATGTTCTTCCAATAGCTA+TGG | 0.529144 | 3.3:-63753837 | None:intergenic |
| CAGAATATTAAGATGGCTAA+CGG | 0.529634 | 3.3:+63755080 | MS.gene35622:intron |
| GGCAGGCATGATTGCACTGA+CGG | 0.532067 | 3.3:+63753717 | MS.gene35622:CDS |
| AACAGAGAAATGGTAGCGTT+AGG | 0.534101 | 3.3:+63753890 | MS.gene35622:CDS |
| TATGTAACTCTTCAAAGGCA+TGG | 0.541754 | 3.3:-63755289 | None:intergenic |
| AAGAGAGAAACCACTGCCAC+TGG | 0.543890 | 3.3:-63752594 | None:intergenic |
| AGCAATAGGACCAGTGGCAG+TGG | 0.545673 | 3.3:+63752584 | MS.gene35622:CDS |
| TTTAGGGGAGATATAATAGC+TGG | 0.546068 | 3.3:+63752234 | MS.gene35622:CDS |
| TTCAGGTTCTTTCTCTCGGT+CGG | 0.546094 | 3.3:+63754157 | MS.gene35622:intron |
| CCCATGAAAGCATAAATAAG+TGG | 0.547324 | 3.3:-63752546 | None:intergenic |
| AGGTTCTTTCTCTCGGTCGG+CGG | 0.551736 | 3.3:+63754160 | MS.gene35622:intron |
| TCGGCGGTAAATTACATGGC+TGG | 0.554084 | 3.3:+63754176 | MS.gene35622:CDS |
| AGGTAAATCACATAGAGAAA+GGG | 0.560126 | 3.3:+63753620 | MS.gene35622:intron |
| GTCACTGTTGATGTCTCCAA+TGG | 0.566938 | 3.3:+63751942 | None:intergenic |
| AGCGGCGATTACCTTGGGAA+AGG | 0.569473 | 3.3:+63753676 | MS.gene35622:CDS |
| TTAGGAACAATGAATGTCGT+TGG | 0.571428 | 3.3:+63753908 | MS.gene35622:CDS |
| GTATTCTCATCAGCCAAACA+TGG | 0.572638 | 3.3:+63753027 | MS.gene35622:CDS |
| GAAACCCTTTAGCTGTTGAA+GGG | 0.577893 | 3.3:-63752944 | None:intergenic |
| ACTTCTATGTAACTCTTCAA+AGG | 0.581904 | 3.3:-63755294 | None:intergenic |
| AAAACCGACAATAGCAGCAT+GGG | 0.585952 | 3.3:-63752896 | None:intergenic |
| TATTCTCATCAGCCAAACAT+GGG | 0.590661 | 3.3:+63753028 | MS.gene35622:CDS |
| ATGAAAGCATAAATAAGTGG+TGG | 0.604379 | 3.3:-63752543 | None:intergenic |
| ACTCTTACAATCATTACACC+TGG | 0.609301 | 3.3:-63754927 | None:intergenic |
| TCGGTCGGCGGTAAATTACA+TGG | 0.613139 | 3.3:+63754172 | MS.gene35622:CDS |
| CAATAAATTTGGCTACCAGA+AGG | 0.613694 | 3.3:-63753275 | None:intergenic |
| ACGGATGAAGAAGCAGTGAA+AGG | 0.618073 | 3.3:+63755099 | MS.gene35622:CDS |
| GATGACAGCAGAAATGATGA+TGG | 0.627258 | 3.3:-63754303 | None:intergenic |
| TTTCTATAGACAGATGTCCC+AGG | 0.630261 | 3.3:-63754873 | None:intergenic |
| TAAAACCGACAATAGCAGCA+TGG | 0.633354 | 3.3:-63752897 | None:intergenic |
| TTGCATGGGAGCATTCTTTG+GGG | 0.638724 | 3.3:+63754388 | MS.gene35622:CDS |
| CGATATAGCAATAGGACCAG+TGG | 0.642615 | 3.3:+63752578 | MS.gene35622:CDS |
| TATTCCCTATACTTAACTGG+GGG | 0.663981 | 3.3:+63752190 | MS.gene35622:CDS |
| ATAACACGCGCAGATAAACA+AGG | 0.670320 | 3.3:+63753474 | MS.gene35622:CDS |
| ATATTCCCTATACTTAACTG+GGG | 0.678687 | 3.3:+63752189 | MS.gene35622:CDS |
| TGAGAATACTGCCTTCAACA+CGG | 0.684095 | 3.3:-63753013 | None:intergenic |
| AGATCCTATTACAAGTGACA+AGG | 0.684935 | 3.3:+63754823 | MS.gene35622:CDS |
| CAACAGCTGCTGCAACAGTG+AGG | 0.697666 | 3.3:-63755578 | None:intergenic |
| ATTCTCATCAGCCAAACATG+GGG | 0.703298 | 3.3:+63753029 | MS.gene35622:CDS |
| GTCTTACATAGTCCATACTG+TGG | 0.710058 | 3.3:-63752412 | None:intergenic |
| GACAGCAGAAATGATGATGG+CGG | 0.713860 | 3.3:-63754300 | None:intergenic |
| CAATACAACTGATATCAATG+GGG | 0.724749 | 3.3:-63753433 | None:intergenic |
| GTTACTGACATCGATACGAG+TGG | 0.726960 | 3.3:+63755263 | MS.gene35622:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAACAAAAAAAACT+TGG | - | chr3.3:63752452-63752471 | None:intergenic | 10.0% |
| !! | TTACAATCTTAAAAAATTTA+GGG | + | chr3.3:63752218-63752237 | MS.gene35622:CDS | 10.0% |
| !! | GATATAAATTATGATACTAT+AGG | + | chr3.3:63755414-63755433 | MS.gene35622:intron | 15.0% |
| !! | GTTACAATCTTAAAAAATTT+AGG | + | chr3.3:63752217-63752236 | MS.gene35622:CDS | 15.0% |
| !! | TACAATCTTAAAAAATTTAG+GGG | + | chr3.3:63752219-63752238 | MS.gene35622:CDS | 15.0% |
| !! | TTAATGTCATACAATAAATT+TGG | - | chr3.3:63753289-63753308 | None:intergenic | 15.0% |
| !!! | CTATTATATCTGAAATATTT+AGG | + | chr3.3:63753327-63753346 | MS.gene35622:intron | 15.0% |
| !!! | TGTTTTTTTTATAAGTGTTT+TGG | + | chr3.3:63752461-63752480 | MS.gene35622:intron | 15.0% |
| !! | AACTAAATAAGAAAATGAGA+CGG | + | chr3.3:63753102-63753121 | MS.gene35622:intron | 20.0% |
| !! | ATATAATAGTAAGATGAAGT+AGG | - | chr3.3:63753316-63753335 | None:intergenic | 20.0% |
| !! | ATATTTGATGTTCTTATACT+TGG | + | chr3.3:63752344-63752363 | MS.gene35622:intron | 20.0% |
| !! | TAGAAAAATGTTGAAGTAAA+TGG | - | chr3.3:63753786-63753805 | None:intergenic | 20.0% |
| !! | TATAATAGTAAGATGAAGTA+GGG | - | chr3.3:63753315-63753334 | None:intergenic | 20.0% |
| !! | TCTCAAAAAAAAGTTCAAAT+TGG | - | chr3.3:63755040-63755059 | None:intergenic | 20.0% |
| !! | TGTTATGAATACAAAAAAAG+TGG | - | chr3.3:63753460-63753479 | None:intergenic | 20.0% |
| !! | TTCAAATGTATAAACAAAGA+AGG | - | chr3.3:63755012-63755031 | None:intergenic | 20.0% |
| !!! | ACATTTTAGTTTTAATTCCA+AGG | - | chr3.3:63752969-63752988 | None:intergenic | 20.0% |
| !!! | GTTCATGAAATTTATTTTAG+CGG | + | chr3.3:63753658-63753677 | MS.gene35622:CDS | 20.0% |
| !!! | TAATATTTAACATTTTGCAG+TGG | + | chr3.3:63753211-63753230 | MS.gene35622:intron | 20.0% |
| !!! | TGGTAGGAAATTTTAATATT+AGG | - | chr3.3:63753154-63753173 | None:intergenic | 20.0% |
| !!! | TTTTTTGCAGAATATTAAGA+TGG | + | chr3.3:63755073-63755092 | MS.gene35622:intron | 20.0% |
| ! | AACTGGCAAACTATATTAAT+CGG | + | chr3.3:63753234-63753253 | MS.gene35622:CDS | 25.0% |
| ! | ACAATACAACTGATATCAAT+GGG | - | chr3.3:63753437-63753456 | None:intergenic | 25.0% |
| ! | AGCATAGTATAACTAAGATT+TGG | - | chr3.3:63754459-63754478 | None:intergenic | 25.0% |
| ! | AGTATTAATCAGAATGTGAA+TGG | - | chr3.3:63753529-63753548 | None:intergenic | 25.0% |
| ! | ATAATAAAGTACATAGACTC+CGG | - | chr3.3:63754634-63754653 | None:intergenic | 25.0% |
| ! | ATATCACAGCAATTTAAACA+AGG | + | chr3.3:63754683-63754702 | MS.gene35622:intron | 25.0% |
| ! | ATGAAGGATTATCAATTAGA+TGG | + | chr3.3:63753866-63753885 | MS.gene35622:CDS | 25.0% |
| ! | CAAACTTTACACATCAAATT+TGG | + | chr3.3:63755527-63755546 | MS.gene35622:CDS | 25.0% |
| ! | CAACCTTAAATTTAAAGACT+AGG | + | chr3.3:63754536-63754555 | MS.gene35622:intron | 25.0% |
| ! | TAAATTTCATGAACAGATGA+AGG | - | chr3.3:63753652-63753671 | None:intergenic | 25.0% |
| ! | TATGAGGCTAAAACAAATTA+AGG | - | chr3.3:63755191-63755210 | None:intergenic | 25.0% |
| ! | TCAAAAACTGAATTCTTGTA+TGG | - | chr3.3:63755131-63755150 | None:intergenic | 25.0% |
| ! | TCAAATTTGGCTAACATAAT+TGG | + | chr3.3:63755540-63755559 | MS.gene35622:CDS | 25.0% |
| ! | TCCAAAACAGAATTTATTCA+AGG | + | chr3.3:63752065-63752084 | MS.gene35622:CDS | 25.0% |
| ! | TGATGATCTTATAACTGAAT+CGG | + | chr3.3:63752820-63752839 | MS.gene35622:intron | 25.0% |
| ! | TGTCAAAGTAATTCCTAATA+GGG | + | chr3.3:63754485-63754504 | MS.gene35622:intron | 25.0% |
| ! | TTACCTTTCTTTAACATAGT+TGG | - | chr3.3:63754979-63754998 | None:intergenic | 25.0% |
| ! | TTGTCAAAGTAATTCCTAAT+AGG | + | chr3.3:63754484-63754503 | MS.gene35622:intron | 25.0% |
| !! | AGTCCTAGTCTTTAAATTTA+AGG | - | chr3.3:63754542-63754561 | None:intergenic | 25.0% |
| !! | ATGTTTCTTTTACAGTGTAT+TGG | - | chr3.3:63752095-63752114 | None:intergenic | 25.0% |
| !! | CTAGTCTTTAAATTTAAGGT+TGG | - | chr3.3:63754538-63754557 | None:intergenic | 25.0% |
| !! | TCCTTGAATAAATTCTGTTT+TGG | - | chr3.3:63752069-63752088 | None:intergenic | 25.0% |
| !! | TTCATACATCTACCATTTTA+TGG | + | chr3.3:63754048-63754067 | MS.gene35622:intron | 25.0% |
| !! | TTTGGAGTGTATTTAAAAAG+AGG | - | chr3.3:63754269-63754288 | None:intergenic | 25.0% |
| !!! | ACATCAAAAAAGTTGATACT+TGG | + | chr3.3:63752156-63752175 | MS.gene35622:CDS | 25.0% |
| !!! | AGGAAATTTTAATATTAGGC+AGG | - | chr3.3:63753150-63753169 | None:intergenic | 25.0% |
| !!! | ATTTCATGTTGTGTTGATTA+GGG | + | chr3.3:63753372-63753391 | MS.gene35622:intron | 25.0% |
| !!! | CAGACAACAGTTTTTAATTT+CGG | + | chr3.3:63754000-63754019 | MS.gene35622:intron | 25.0% |
| !!! | GGAAATTTTAATATTAGGCA+GGG | - | chr3.3:63753149-63753168 | None:intergenic | 25.0% |
| !!! | TATTTCATGTTGTGTTGATT+AGG | + | chr3.3:63753371-63753390 | MS.gene35622:intron | 25.0% |
| !!! | TCAACTTTTTTGATGTACTT+TGG | - | chr3.3:63752152-63752171 | None:intergenic | 25.0% |
| !!! | TTATACTTGGTTTGGAAAAT+AGG | + | chr3.3:63752357-63752376 | MS.gene35622:intron | 25.0% |
| !!! | TTGAATAAATTCTGTTTTGG+AGG | - | chr3.3:63752066-63752085 | None:intergenic | 25.0% |
| AAATGTTCTTCCAATAGCTA+TGG | - | chr3.3:63753840-63753859 | None:intergenic | 30.0% | |
| AAGAACATTTGCATCTATGA+AGG | + | chr3.3:63753850-63753869 | MS.gene35622:CDS | 30.0% | |
| AAGGTAAATCACATAGAGAA+AGG | + | chr3.3:63753619-63753638 | MS.gene35622:intron | 30.0% | |
| ACAAAGCTTGAATCTGTAAA+AGG | - | chr3.3:63752522-63752541 | None:intergenic | 30.0% | |
| ACCACTTATTTATGCTTTCA+TGG | + | chr3.3:63752545-63752564 | MS.gene35622:CDS | 30.0% | |
| ACTCCAACTATGTTAAAGAA+AGG | + | chr3.3:63754973-63754992 | MS.gene35622:CDS | 30.0% | |
| ACTTCTATGTAACTCTTCAA+AGG | - | chr3.3:63755297-63755316 | None:intergenic | 30.0% | |
| AGAAGAACAAGAAATTCTTC+TGG | + | chr3.3:63753397-63753416 | MS.gene35622:CDS | 30.0% | |
| AGATACAGACAAAAACAAGA+TGG | + | chr3.3:63751981-63752000 | MS.gene35622:CDS | 30.0% | |
| AGGTAAATCACATAGAGAAA+GGG | + | chr3.3:63753620-63753639 | MS.gene35622:intron | 30.0% | |
| ATATTCCCTATACTTAACTG+GGG | + | chr3.3:63752189-63752208 | MS.gene35622:CDS | 30.0% | |
| ATTAGATGGAAACAGAGAAA+TGG | + | chr3.3:63753880-63753899 | MS.gene35622:CDS | 30.0% | |
| ATTGCAACTTTGTAAGCATA+TGG | - | chr3.3:63752042-63752061 | None:intergenic | 30.0% | |
| ATTGTGATTATATGATGCAG+CGG | + | chr3.3:63755241-63755260 | MS.gene35622:intron | 30.0% | |
| CAAAATTAATCATGTCTGCT+AGG | + | chr3.3:63755342-63755361 | MS.gene35622:intron | 30.0% | |
| CAAAGCTTGAATCTGTAAAA+GGG | - | chr3.3:63752521-63752540 | None:intergenic | 30.0% | |
| CAATACAACTGATATCAATG+GGG | - | chr3.3:63753436-63753455 | None:intergenic | 30.0% | |
| CAGAATATTAAGATGGCTAA+CGG | + | chr3.3:63755080-63755099 | MS.gene35622:intron | 30.0% | |
| CATATTCCCTATACTTAACT+GGG | + | chr3.3:63752188-63752207 | MS.gene35622:CDS | 30.0% | |
| CCACTTATTTATGCTTTCAT+GGG | + | chr3.3:63752546-63752565 | MS.gene35622:CDS | 30.0% | |
| CGTCAATTTAGTCCATAAAA+TGG | - | chr3.3:63754063-63754082 | None:intergenic | 30.0% | |
| GAAGAACAAGAAATTCTTCT+GGG | + | chr3.3:63753398-63753417 | MS.gene35622:CDS | 30.0% | |
| GACAATACAACTGATATCAA+TGG | - | chr3.3:63753438-63753457 | None:intergenic | 30.0% | |
| GATTTACCTTCACATATCAA+TGG | - | chr3.3:63753609-63753628 | None:intergenic | 30.0% | |
| GGAAAAATACTCATAAAGAG+AGG | - | chr3.3:63753765-63753784 | None:intergenic | 30.0% | |
| GTCAAAGTAATTCCTAATAG+GGG | + | chr3.3:63754486-63754505 | MS.gene35622:intron | 30.0% | |
| TCAAACAAGTAACACATTCT+TGG | - | chr3.3:63755468-63755487 | None:intergenic | 30.0% | |
| TCATAAGTCAAAATTACCTG+AGG | - | chr3.3:63752285-63752304 | None:intergenic | 30.0% | |
| TCATATTCCCTATACTTAAC+TGG | + | chr3.3:63752187-63752206 | MS.gene35622:CDS | 30.0% | |
| TCCTAAAAACCAAAATGCAA+TGG | - | chr3.3:63753815-63753834 | None:intergenic | 30.0% | |
| TGAAACCTGTCACAAAAATA+AGG | - | chr3.3:63754790-63754809 | None:intergenic | 30.0% | |
| TGATGTTCTTATACTTGGTT+TGG | + | chr3.3:63752349-63752368 | MS.gene35622:intron | 30.0% | |
| TTCTGTCAAAAAACCAGATT+AGG | + | chr3.3:63752853-63752872 | MS.gene35622:intron | 30.0% | |
| TTCTTTAACATAGTTGGAGT+TGG | - | chr3.3:63754973-63754992 | None:intergenic | 30.0% | |
| TTGTCTGTATCTTTATCAGT+TGG | - | chr3.3:63751973-63751992 | None:intergenic | 30.0% | |
| TTTAAAGACTAGGACTAAGT+AGG | + | chr3.3:63754546-63754565 | MS.gene35622:intron | 30.0% | |
| ! | ATGAAAGCATAAATAAGTGG+TGG | - | chr3.3:63752546-63752565 | None:intergenic | 30.0% |
| ! | CAAATTACTCAAGAAGTATG+AGG | - | chr3.3:63755207-63755226 | None:intergenic | 30.0% |
| ! | CTAACTAAACCATTGCATTT+TGG | + | chr3.3:63753803-63753822 | MS.gene35622:intron | 30.0% |
| ! | TGGTTTGGAAAATAGGATAT+TGG | + | chr3.3:63752364-63752383 | MS.gene35622:intron | 30.0% |
| ! | TTTTGACCATTGATATGTGA+AGG | + | chr3.3:63753600-63753619 | MS.gene35622:intron | 30.0% |
| !! | GGTCAAAAACTTTAGTTCTA+TGG | - | chr3.3:63753588-63753607 | None:intergenic | 30.0% |
| !! | TCTTGAAAAAAGAAGTGTTC+AGG | + | chr3.3:63755316-63755335 | MS.gene35622:CDS | 30.0% |
| !!! | ACCATTGCATTTTGGTTTTT+AGG | + | chr3.3:63753811-63753830 | MS.gene35622:intron | 30.0% |
| !!! | CAATTTTAAAACCTTTCCCA+AGG | - | chr3.3:63753690-63753709 | None:intergenic | 30.0% |
| !!! | CTTGGGAAAGGTTTTAAAAT+TGG | + | chr3.3:63753688-63753707 | MS.gene35622:CDS | 30.0% |
| !!! | GATCGATTTTTTTTCCTTTC+AGG | + | chr3.3:63754140-63754159 | MS.gene35622:intron | 30.0% |
| ACAATACACAGAAGCTAGTA+AGG | + | chr3.3:63754902-63754921 | MS.gene35622:CDS | 35.0% | |
| ACTCTTACAATCATTACACC+TGG | - | chr3.3:63754930-63754949 | None:intergenic | 35.0% | |
| AGATCCTATTACAAGTGACA+AGG | + | chr3.3:63754823-63754842 | MS.gene35622:CDS | 35.0% | |
| ATACTCTAAGCTTGCACATT+TGG | + | chr3.3:63752387-63752406 | MS.gene35622:CDS | 35.0% | |
| CAATAAATTTGGCTACCAGA+AGG | - | chr3.3:63753278-63753297 | None:intergenic | 35.0% | |
| CAATATTAGAGACTGCAGTT+TGG | - | chr3.3:63754205-63754224 | None:intergenic | 35.0% | |
| CATGTGTATATGTAGAAGCT+TGG | + | chr3.3:63755373-63755392 | MS.gene35622:intron | 35.0% | |
| GTCAATCAAGAATCCTAATC+TGG | - | chr3.3:63752869-63752888 | None:intergenic | 35.0% | |
| TATGTAACTCTTCAAAGGCA+TGG | - | chr3.3:63755292-63755311 | None:intergenic | 35.0% | |
| TATTCCCTATACTTAACTGG+GGG | + | chr3.3:63752190-63752209 | MS.gene35622:CDS | 35.0% | |
| TATTCTCATCAGCCAAACAT+GGG | + | chr3.3:63753028-63753047 | MS.gene35622:CDS | 35.0% | |
| TGATATTATCTCCGTGTTGA+AGG | + | chr3.3:63753002-63753021 | MS.gene35622:CDS | 35.0% | |
| TGTAATCCCAGCAAAAAAAG+TGG | - | chr3.3:63752694-63752713 | None:intergenic | 35.0% | |
| TTAGGAACAATGAATGTCGT+TGG | + | chr3.3:63753908-63753927 | MS.gene35622:CDS | 35.0% | |
| TTATCAGTTGGAGAATCCAT+TGG | - | chr3.3:63751961-63751980 | None:intergenic | 35.0% | |
| TTTAGGGGAGATATAATAGC+TGG | + | chr3.3:63752234-63752253 | MS.gene35622:CDS | 35.0% | |
| TTTGGCTAACATAATTGGTC+AGG | + | chr3.3:63755545-63755564 | MS.gene35622:CDS | 35.0% | |
| ! | CCCATGAAAGCATAAATAAG+TGG | - | chr3.3:63752549-63752568 | None:intergenic | 35.0% |
| ! | TACTAGCTTCTGTGTATTGT+TGG | - | chr3.3:63754902-63754921 | None:intergenic | 35.0% |
| ! | TGGTCTTTGAAAGATCTTAG+AGG | - | chr3.3:63752132-63752151 | None:intergenic | 35.0% |
| ! | TTAACATTTTGCAGTGGAAC+TGG | + | chr3.3:63753217-63753236 | MS.gene35622:intron | 35.0% |
| ! | TTCGATGACTTCTTGTTATG+TGG | + | chr3.3:63753931-63753950 | MS.gene35622:CDS | 35.0% |
| !! | ATCAGGCAGCAATTTTGATA+TGG | + | chr3.3:63754339-63754358 | MS.gene35622:CDS | 35.0% |
| !! | ATTCGATTTTGTTGCTTGCA+TGG | + | chr3.3:63754373-63754392 | MS.gene35622:CDS | 35.0% |
| !! | TTCGATTTTGTTGCTTGCAT+GGG | + | chr3.3:63754374-63754393 | MS.gene35622:CDS | 35.0% |
| !! | TTTTAGGAAGCCATAGCTAT+TGG | + | chr3.3:63753827-63753846 | MS.gene35622:intron | 35.0% |
| !!! | AAGCTTTTTGAGTTTCCTTC+TGG | + | chr3.3:63753260-63753279 | MS.gene35622:CDS | 35.0% |
| !!! | AGGTTTTAAAATTGGCGTCA+TGG | + | chr3.3:63753696-63753715 | MS.gene35622:CDS | 35.0% |
| !!! | TGAGACCTTATTTTTGTGAC+AGG | + | chr3.3:63754782-63754801 | MS.gene35622:intron | 35.0% |
| !!! | TTACTGCCACTTTTTTTGCT+GGG | + | chr3.3:63752685-63752704 | MS.gene35622:CDS | 35.0% |
| !!! | TTTACTGCCACTTTTTTTGC+TGG | + | chr3.3:63752684-63752703 | MS.gene35622:CDS | 35.0% |
| AAAACCGACAATAGCAGCAT+GGG | - | chr3.3:63752899-63752918 | None:intergenic | 40.0% | |
| AATTGCCCTTCAACAGCTAA+AGG | + | chr3.3:63752939-63752958 | MS.gene35622:CDS | 40.0% | |
| AGATTCTCGCATAGCATAAC+CGG | + | chr3.3:63754612-63754631 | MS.gene35622:intron | 40.0% | |
| AGTGTAACATTAGTAGCAGC+TGG | - | chr3.3:63752787-63752806 | None:intergenic | 40.0% | |
| AGTTCTCGCGATATAGCAAT+AGG | + | chr3.3:63752570-63752589 | MS.gene35622:CDS | 40.0% | |
| ATAACACGCGCAGATAAACA+AGG | + | chr3.3:63753474-63753493 | MS.gene35622:CDS | 40.0% | |
| ATTCTCATCAGCCAAACATG+GGG | + | chr3.3:63753029-63753048 | MS.gene35622:CDS | 40.0% | |
| ATTGCCCTTCAACAGCTAAA+GGG | + | chr3.3:63752940-63752959 | MS.gene35622:CDS | 40.0% | |
| GAAACCCTTTAGCTGTTGAA+GGG | - | chr3.3:63752947-63752966 | None:intergenic | 40.0% | |
| GATGACAGCAGAAATGATGA+TGG | - | chr3.3:63754306-63754325 | None:intergenic | 40.0% | |
| GCTGGTAGTACATGTATATC+CGG | - | chr3.3:63752769-63752788 | None:intergenic | 40.0% | |
| GGATTACACAAGCAACTCTT+GGG | + | chr3.3:63752706-63752725 | MS.gene35622:CDS | 40.0% | |
| GTATTCTCATCAGCCAAACA+TGG | + | chr3.3:63753027-63753046 | MS.gene35622:CDS | 40.0% | |
| GTCTTACATAGTCCATACTG+TGG | - | chr3.3:63752415-63752434 | None:intergenic | 40.0% | |
| GTCTTATGTACACCCCTATT+AGG | - | chr3.3:63754501-63754520 | None:intergenic | 40.0% | |
| TAAAACCGACAATAGCAGCA+TGG | - | chr3.3:63752900-63752919 | None:intergenic | 40.0% | |
| TATTCTTCTGCATGCGTAAC+AGG | - | chr3.3:63752651-63752670 | None:intergenic | 40.0% | |
| TGAGAATACTGCCTTCAACA+CGG | - | chr3.3:63753016-63753035 | None:intergenic | 40.0% | |
| TTCCCCAAAATAGCAGTTCT+TGG | - | chr3.3:63754849-63754868 | None:intergenic | 40.0% | |
| TTCTCCCCCAGTTAAGTATA+GGG | - | chr3.3:63752197-63752216 | None:intergenic | 40.0% | |
| TTGCAAACATACACACTGGT+AGG | - | chr3.3:63753170-63753189 | None:intergenic | 40.0% | |
| TTTCTATAGACAGATGTCCC+AGG | - | chr3.3:63754876-63754895 | None:intergenic | 40.0% | |
| ! | AACAGAGAAATGGTAGCGTT+AGG | + | chr3.3:63753890-63753909 | MS.gene35622:CDS | 40.0% |
| ! | AAGCAACTCTTGGGATTTTC+AGG | + | chr3.3:63752715-63752734 | MS.gene35622:CDS | 40.0% |
| ! | ACTTCTTGTTATGTGGCAAC+TGG | + | chr3.3:63753938-63753957 | MS.gene35622:CDS | 40.0% |
| ! | GTTTTCGTCTCTGTTGAGAT+AGG | + | chr3.3:63754413-63754432 | MS.gene35622:CDS | 40.0% |
| ! | TTTAAAATTGGCGTCATGGC+AGG | + | chr3.3:63753700-63753719 | MS.gene35622:CDS | 40.0% |
| !! | AAGGCCAAGAACTGCTATTT+TGG | + | chr3.3:63754842-63754861 | MS.gene35622:CDS | 40.0% |
| !! | ATTTTAGCGGCGATTACCTT+GGG | + | chr3.3:63753671-63753690 | MS.gene35622:CDS | 40.0% |
| !! | CTATTTTGGGGAAGATTCCT+GGG | + | chr3.3:63754856-63754875 | MS.gene35622:CDS | 40.0% |
| !! | TCCTTTCAGGTTCTTTCTCT+CGG | + | chr3.3:63754153-63754172 | MS.gene35622:intron | 40.0% |
| !! | TTGGCCTTGTCACTTGTAAT+AGG | - | chr3.3:63754830-63754849 | None:intergenic | 40.0% |
| !!! | AGGCCAAGAACTGCTATTTT+GGG | + | chr3.3:63754843-63754862 | MS.gene35622:CDS | 40.0% |
| !!! | CTGCTATTGTCGGTTTTATG+GGG | + | chr3.3:63752902-63752921 | MS.gene35622:CDS | 40.0% |
| !!! | GCTGCTATTGTCGGTTTTAT+GGG | + | chr3.3:63752901-63752920 | MS.gene35622:CDS | 40.0% |
| !!! | TATTTTAGCGGCGATTACCT+TGG | + | chr3.3:63753670-63753689 | MS.gene35622:CDS | 40.0% |
| !!! | TGCTATTGTCGGTTTTATGG+GGG | + | chr3.3:63752903-63752922 | MS.gene35622:CDS | 40.0% |
| !!! | TGCTGCTATTGTCGGTTTTA+TGG | + | chr3.3:63752900-63752919 | MS.gene35622:CDS | 40.0% |
| ACAGAAGCTAGTAAGGTTCC+AGG | + | chr3.3:63754909-63754928 | MS.gene35622:CDS | 45.0% | |
| ACCGAGAGAAAGAACCTGAA+AGG | - | chr3.3:63754157-63754176 | None:intergenic | 45.0% | |
| ACGGATGAAGAAGCAGTGAA+AGG | + | chr3.3:63755099-63755118 | MS.gene35622:CDS | 45.0% | |
| CAACAGCTAAAGGGTTTCCT+TGG | + | chr3.3:63752949-63752968 | MS.gene35622:CDS | 45.0% | |
| CAGTGGTTTCTCTCTTGTTG+GGG | + | chr3.3:63752601-63752620 | MS.gene35622:CDS | 45.0% | |
| CGATATAGCAATAGGACCAG+TGG | + | chr3.3:63752578-63752597 | MS.gene35622:CDS | 45.0% | |
| CTATCCCATGCTGCTATTGT+CGG | + | chr3.3:63752892-63752911 | MS.gene35622:CDS | 45.0% | |
| CTTCTCCCCCAGTTAAGTAT+AGG | - | chr3.3:63752198-63752217 | None:intergenic | 45.0% | |
| GATATCAATGGGGCAATTGC+TGG | - | chr3.3:63753426-63753445 | None:intergenic | 45.0% | |
| GCACTTGCAAACATACACAC+TGG | - | chr3.3:63753174-63753193 | None:intergenic | 45.0% | |
| GCAGTGGTTTCTCTCTTGTT+GGG | + | chr3.3:63752600-63752619 | MS.gene35622:CDS | 45.0% | |
| GGAAACCCTTTAGCTGTTGA+AGG | - | chr3.3:63752948-63752967 | None:intergenic | 45.0% | |
| GGGATTACACAAGCAACTCT+TGG | + | chr3.3:63752705-63752724 | MS.gene35622:CDS | 45.0% | |
| GTTACTGACATCGATACGAG+TGG | + | chr3.3:63755263-63755282 | MS.gene35622:CDS | 45.0% | |
| TGCAAGTCTTTGCATACCTC+AGG | + | chr3.3:63752266-63752285 | MS.gene35622:CDS | 45.0% | |
| TTCTGCTGTCATCAGTCTTG+TGG | + | chr3.3:63754313-63754332 | MS.gene35622:CDS | 45.0% | |
| ! | CATCAGTCTTGTGGACTATC+AGG | + | chr3.3:63754322-63754341 | MS.gene35622:CDS | 45.0% |
| ! | CATGGGTTCACATCTAGCTT+TGG | - | chr3.3:63755615-63755634 | None:intergenic | 45.0% |
| ! | CTTGTTTGAGCAGCTTGTTC+TGG | + | chr3.3:63755479-63755498 | MS.gene35622:intron | 45.0% |
| ! | TTCAGGTTCTTTCTCTCGGT+CGG | + | chr3.3:63754157-63754176 | MS.gene35622:intron | 45.0% |
| !! | CTTGCATGGGAGCATTCTTT+GGG | + | chr3.3:63754387-63754406 | MS.gene35622:CDS | 45.0% |
| !! | GACAGCAGAAATGATGATGG+CGG | - | chr3.3:63754303-63754322 | None:intergenic | 45.0% |
| !! | GCTATTTTGGGGAAGATTCC+TGG | + | chr3.3:63754855-63754874 | MS.gene35622:CDS | 45.0% |
| !! | TTGCATGGGAGCATTCTTTG+GGG | + | chr3.3:63754388-63754407 | MS.gene35622:CDS | 45.0% |
| !!! | GCTATTGTCGGTTTTATGGG+GGG | + | chr3.3:63752904-63752923 | MS.gene35622:CDS | 45.0% |
| !!! | GGCCAAGAACTGCTATTTTG+GGG | + | chr3.3:63754844-63754863 | MS.gene35622:CDS | 45.0% |
| AAGAGAGAAACCACTGCCAC+TGG | - | chr3.3:63752597-63752616 | None:intergenic | 50.0% | |
| CGACAATAGCAGCATGGGAT+AGG | - | chr3.3:63752894-63752913 | None:intergenic | 50.0% | |
| GCACATTTGGCACCACAGTA+TGG | + | chr3.3:63752400-63752419 | MS.gene35622:CDS | 50.0% | |
| GGCAGTGGTTTCTCTCTTGT+TGG | + | chr3.3:63752599-63752618 | MS.gene35622:CDS | 50.0% | |
| TCGGCGGTAAATTACATGGC+TGG | + | chr3.3:63754176-63754195 | MS.gene35622:CDS | 50.0% | |
| TCGGTCGGCGGTAAATTACA+TGG | + | chr3.3:63754172-63754191 | MS.gene35622:CDS | 50.0% | |
| TTGTCTGTCACTGCTGAACC+AGG | - | chr3.3:63755510-63755529 | None:intergenic | 50.0% | |
| ! | CAGCTTGTTCTGGCAAATCC+TGG | + | chr3.3:63755489-63755508 | MS.gene35622:intron | 50.0% |
| ! | CGAAGCACTAACACAGACAC+CGG | + | chr3.3:63752747-63752766 | MS.gene35622:intron | 50.0% |
| ! | GAGAGAGCATACCCCATGTT+TGG | - | chr3.3:63753043-63753062 | None:intergenic | 50.0% |
| !! | AATGATGATGGCGGCGAGAA+TGG | - | chr3.3:63754294-63754313 | None:intergenic | 50.0% |
| !! | GCTTGCATGGGAGCATTCTT+TGG | + | chr3.3:63754386-63754405 | MS.gene35622:CDS | 50.0% |
| AGCAATAGGACCAGTGGCAG+TGG | + | chr3.3:63752584-63752603 | MS.gene35622:CDS | 55.0% | |
| AGCGGCGATTACCTTGGGAA+AGG | + | chr3.3:63753676-63753695 | MS.gene35622:CDS | 55.0% | |
| AGGTTCTTTCTCTCGGTCGG+CGG | + | chr3.3:63754160-63754179 | MS.gene35622:intron | 55.0% | |
| ATGGCGGCGAGAATGGCATT+TGG | - | chr3.3:63754287-63754306 | None:intergenic | 55.0% | |
| CAACAGCTGCTGCAACAGTG+AGG | - | chr3.3:63755581-63755600 | None:intergenic | 55.0% | |
| GGCAGGCATGATTGCACTGA+CGG | + | chr3.3:63753717-63753736 | MS.gene35622:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 63751952 | 63755635 | 63751952 | ID=MS.gene35622 |
| chr3.3 | mRNA | 63751952 | 63755635 | 63751952 | ID=MS.gene35622.t1;Parent=MS.gene35622 |
| chr3.3 | exon | 63751952 | 63752287 | 63751952 | ID=MS.gene35622.t1.exon1;Parent=MS.gene35622.t1 |
| chr3.3 | CDS | 63751952 | 63752287 | 63751952 | ID=cds.MS.gene35622.t1;Parent=MS.gene35622.t1 |
| chr3.3 | exon | 63752379 | 63752427 | 63752379 | ID=MS.gene35622.t1.exon2;Parent=MS.gene35622.t1 |
| chr3.3 | CDS | 63752379 | 63752427 | 63752379 | ID=cds.MS.gene35622.t1;Parent=MS.gene35622.t1 |
| chr3.3 | exon | 63752529 | 63752736 | 63752529 | ID=MS.gene35622.t1.exon3;Parent=MS.gene35622.t1 |
| chr3.3 | CDS | 63752529 | 63752736 | 63752529 | ID=cds.MS.gene35622.t1;Parent=MS.gene35622.t1 |
| chr3.3 | exon | 63752870 | 63753050 | 63752870 | ID=MS.gene35622.t1.exon4;Parent=MS.gene35622.t1 |
| chr3.3 | CDS | 63752870 | 63753050 | 63752870 | ID=cds.MS.gene35622.t1;Parent=MS.gene35622.t1 |
| chr3.3 | exon | 63753231 | 63753296 | 63753231 | ID=MS.gene35622.t1.exon5;Parent=MS.gene35622.t1 |
| chr3.3 | CDS | 63753231 | 63753296 | 63753231 | ID=cds.MS.gene35622.t1;Parent=MS.gene35622.t1 |
| chr3.3 | exon | 63753393 | 63753506 | 63753393 | ID=MS.gene35622.t1.exon6;Parent=MS.gene35622.t1 |
| chr3.3 | CDS | 63753393 | 63753506 | 63753393 | ID=cds.MS.gene35622.t1;Parent=MS.gene35622.t1 |
| chr3.3 | exon | 63753622 | 63753738 | 63753622 | ID=MS.gene35622.t1.exon7;Parent=MS.gene35622.t1 |
| chr3.3 | CDS | 63753622 | 63753738 | 63753622 | ID=cds.MS.gene35622.t1;Parent=MS.gene35622.t1 |
| chr3.3 | exon | 63753833 | 63753959 | 63753833 | ID=MS.gene35622.t1.exon8;Parent=MS.gene35622.t1 |
| chr3.3 | CDS | 63753833 | 63753959 | 63753833 | ID=cds.MS.gene35622.t1;Parent=MS.gene35622.t1 |
| chr3.3 | exon | 63754162 | 63754448 | 63754162 | ID=MS.gene35622.t1.exon9;Parent=MS.gene35622.t1 |
| chr3.3 | CDS | 63754162 | 63754448 | 63754162 | ID=cds.MS.gene35622.t1;Parent=MS.gene35622.t1 |
| chr3.3 | exon | 63754804 | 63754994 | 63754804 | ID=MS.gene35622.t1.exon10;Parent=MS.gene35622.t1 |
| chr3.3 | CDS | 63754804 | 63754994 | 63754804 | ID=cds.MS.gene35622.t1;Parent=MS.gene35622.t1 |
| chr3.3 | exon | 63755083 | 63755165 | 63755083 | ID=MS.gene35622.t1.exon11;Parent=MS.gene35622.t1 |
| chr3.3 | CDS | 63755083 | 63755165 | 63755083 | ID=cds.MS.gene35622.t1;Parent=MS.gene35622.t1 |
| chr3.3 | exon | 63755261 | 63755337 | 63755261 | ID=MS.gene35622.t1.exon12;Parent=MS.gene35622.t1 |
| chr3.3 | CDS | 63755261 | 63755337 | 63755261 | ID=cds.MS.gene35622.t1;Parent=MS.gene35622.t1 |
| chr3.3 | exon | 63755492 | 63755635 | 63755492 | ID=MS.gene35622.t1.exon13;Parent=MS.gene35622.t1 |
| chr3.3 | CDS | 63755492 | 63755635 | 63755492 | ID=cds.MS.gene35622.t1;Parent=MS.gene35622.t1 |
| Gene Sequence |
| Protein sequence |
