Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29013.t1 | XP_013460839.1 | 98.6 | 656 | 9 | 0 | 1 | 656 | 4 | 659 | 0.00E+00 | 1245 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29013.t1 | Q9FEP7 | 76.3 | 650 | 149 | 4 | 4 | 652 | 7 | 652 | 2.2e-279 | 962.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29013.t1 | A0A072V0K2 | 98.6 | 656 | 9 | 0 | 1 | 656 | 4 | 659 | 0.0e+00 | 1245.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051122 | MS.gene29013 | 0.812297 | 4.55E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene29013 | 0.842365 | 2.70E-58 | -1.69E-46 |
| MS.gene05761 | MS.gene29013 | 0.800498 | 1.40E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29013 | MS.gene010268 | PPI |
| MS.gene033981 | MS.gene29013 | PPI |
| MS.gene29013 | MS.gene33361 | PPI |
| MS.gene29013 | MS.gene053674 | PPI |
| MS.gene29852 | MS.gene29013 | PPI |
| MS.gene29013 | MS.gene062785 | PPI |
| MS.gene61200 | MS.gene29013 | PPI |
| MS.gene29013 | MS.gene36287 | PPI |
| MS.gene29013 | MS.gene33359 | PPI |
| MS.gene053673 | MS.gene29013 | PPI |
| MS.gene29013 | MS.gene30731 | PPI |
| MS.gene35622 | MS.gene29013 | PPI |
| MS.gene29013 | MS.gene035937 | PPI |
| MS.gene89102 | MS.gene29013 | PPI |
| MS.gene29013 | MS.gene57599 | PPI |
| MS.gene29013 | MS.gene010265 | PPI |
| MS.gene33360 | MS.gene29013 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29013.t1 | MTR_3g073780 | 98.628 | 656 | 9 | 0 | 1 | 656 | 4 | 659 | 0.0 | 1320 |
| MS.gene29013.t1 | MTR_3g073780 | 98.799 | 583 | 7 | 0 | 1 | 583 | 4 | 586 | 0.0 | 1175 |
| MS.gene29013.t1 | MTR_5g061880 | 84.018 | 657 | 102 | 2 | 1 | 656 | 1 | 655 | 0.0 | 1136 |
| MS.gene29013.t1 | MTR_3g073780 | 98.741 | 556 | 7 | 0 | 1 | 556 | 4 | 559 | 0.0 | 1117 |
| MS.gene29013.t1 | MTR_2g008470 | 70.288 | 626 | 182 | 3 | 27 | 651 | 51 | 673 | 0.0 | 903 |
| MS.gene29013.t1 | MTR_2g008470 | 70.288 | 626 | 182 | 3 | 27 | 651 | 32 | 654 | 0.0 | 902 |
| MS.gene29013.t1 | MTR_1g071530 | 52.941 | 646 | 292 | 4 | 20 | 656 | 3 | 645 | 0.0 | 694 |
| MS.gene29013.t1 | MTR_2g102243 | 53.344 | 628 | 289 | 3 | 30 | 656 | 23 | 647 | 0.0 | 694 |
| MS.gene29013.t1 | MTR_7g095430 | 52.174 | 621 | 293 | 3 | 30 | 649 | 18 | 635 | 0.0 | 693 |
| MS.gene29013.t1 | MTR_4g084620 | 51.411 | 638 | 304 | 5 | 14 | 649 | 1 | 634 | 0.0 | 682 |
| MS.gene29013.t1 | MTR_5g061860 | 54.327 | 624 | 269 | 6 | 35 | 648 | 29 | 646 | 0.0 | 678 |
| MS.gene29013.t1 | MTR_3g087740 | 53.488 | 645 | 284 | 7 | 8 | 648 | 17 | 649 | 0.0 | 677 |
| MS.gene29013.t1 | MTR_4g011970 | 51.823 | 631 | 294 | 4 | 30 | 656 | 30 | 654 | 0.0 | 674 |
| MS.gene29013.t1 | MTR_4g084640 | 50.230 | 651 | 316 | 4 | 6 | 656 | 2 | 644 | 0.0 | 668 |
| MS.gene29013.t1 | MTR_3g073730 | 54.455 | 606 | 260 | 5 | 57 | 648 | 49 | 652 | 0.0 | 664 |
| MS.gene29013.t1 | MTR_7g095430 | 53.333 | 555 | 255 | 3 | 30 | 583 | 18 | 569 | 0.0 | 636 |
| MS.gene29013.t1 | MTR_2g102243 | 54.595 | 555 | 248 | 3 | 30 | 583 | 23 | 574 | 0.0 | 635 |
| MS.gene29013.t1 | MTR_5g061860 | 57.331 | 532 | 212 | 6 | 35 | 556 | 28 | 554 | 0.0 | 608 |
| MS.gene29013.t1 | MTR_6g086170 | 43.680 | 625 | 345 | 4 | 25 | 648 | 5 | 623 | 0.0 | 573 |
| MS.gene29013.t1 | MTR_3g087730 | 41.014 | 651 | 356 | 9 | 6 | 645 | 16 | 649 | 1.24e-173 | 510 |
| MS.gene29013.t1 | MTR_7g022870 | 39.446 | 578 | 336 | 7 | 74 | 648 | 70 | 636 | 1.84e-137 | 419 |
| MS.gene29013.t1 | MTR_7g022870 | 40.351 | 513 | 292 | 7 | 74 | 583 | 70 | 571 | 5.68e-122 | 374 |
| MS.gene29013.t1 | MTR_6g024420 | 48.182 | 110 | 38 | 3 | 257 | 366 | 76 | 166 | 2.49e-24 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29013.t1 | AT1G22150 | 76.308 | 650 | 149 | 4 | 4 | 652 | 7 | 652 | 0.0 | 979 |
| MS.gene29013.t1 | AT1G22150 | 76.308 | 650 | 149 | 4 | 4 | 652 | 7 | 652 | 0.0 | 979 |
| MS.gene29013.t1 | AT1G22150 | 76.308 | 650 | 149 | 4 | 4 | 652 | 7 | 652 | 0.0 | 979 |
| MS.gene29013.t1 | AT1G78000 | 77.352 | 627 | 139 | 2 | 27 | 652 | 25 | 649 | 0.0 | 946 |
| MS.gene29013.t1 | AT1G78000 | 77.352 | 627 | 139 | 2 | 27 | 652 | 25 | 649 | 0.0 | 946 |
| MS.gene29013.t1 | AT1G78000 | 77.352 | 627 | 139 | 2 | 27 | 652 | 25 | 649 | 0.0 | 946 |
| MS.gene29013.t1 | AT4G08620 | 71.589 | 623 | 174 | 2 | 31 | 652 | 24 | 644 | 0.0 | 909 |
| MS.gene29013.t1 | AT1G78000 | 78.462 | 585 | 123 | 2 | 27 | 610 | 25 | 607 | 0.0 | 891 |
| MS.gene29013.t1 | AT1G22150 | 77.453 | 581 | 126 | 4 | 4 | 583 | 7 | 583 | 0.0 | 881 |
| MS.gene29013.t1 | AT1G78000 | 78.853 | 558 | 115 | 2 | 27 | 583 | 25 | 580 | 0.0 | 847 |
| MS.gene29013.t1 | AT1G78000 | 78.481 | 474 | 100 | 1 | 26 | 499 | 24 | 495 | 0.0 | 712 |
| MS.gene29013.t1 | AT3G51895 | 53.215 | 622 | 286 | 4 | 30 | 649 | 65 | 683 | 0.0 | 704 |
| MS.gene29013.t1 | AT3G51895 | 53.215 | 622 | 286 | 4 | 30 | 649 | 20 | 638 | 0.0 | 702 |
| MS.gene29013.t1 | AT3G15990 | 51.675 | 627 | 299 | 3 | 30 | 655 | 27 | 650 | 0.0 | 686 |
| MS.gene29013.t1 | AT1G78000 | 80.984 | 447 | 82 | 2 | 138 | 583 | 1 | 445 | 0.0 | 672 |
| MS.gene29013.t1 | AT5G10180 | 53.333 | 630 | 284 | 6 | 24 | 648 | 48 | 672 | 0.0 | 659 |
| MS.gene29013.t1 | AT1G23090 | 50.641 | 624 | 303 | 4 | 30 | 651 | 4 | 624 | 0.0 | 657 |
| MS.gene29013.t1 | AT4G02700 | 49.114 | 621 | 311 | 4 | 30 | 648 | 10 | 627 | 0.0 | 627 |
| MS.gene29013.t1 | AT1G77990 | 49.525 | 632 | 310 | 5 | 21 | 645 | 34 | 663 | 0.0 | 620 |
| MS.gene29013.t1 | AT5G19600 | 42.543 | 637 | 347 | 7 | 16 | 648 | 2 | 623 | 0.0 | 537 |
| MS.gene29013.t1 | AT1G23090 | 49.899 | 495 | 243 | 4 | 159 | 651 | 1 | 492 | 2.56e-174 | 506 |
| MS.gene29013.t1 | AT1G23090 | 49.899 | 495 | 243 | 4 | 159 | 651 | 1 | 492 | 2.56e-174 | 506 |
| MS.gene29013.t1 | AT1G23090 | 49.899 | 495 | 243 | 4 | 159 | 651 | 1 | 492 | 2.56e-174 | 506 |
| MS.gene29013.t1 | AT3G12520 | 38.581 | 578 | 341 | 7 | 74 | 648 | 47 | 613 | 9.96e-133 | 405 |
| MS.gene29013.t1 | AT3G12520 | 38.581 | 578 | 341 | 7 | 74 | 648 | 63 | 629 | 1.74e-132 | 405 |
| MS.gene29013.t1 | AT5G13550 | 37.688 | 597 | 358 | 7 | 55 | 648 | 57 | 642 | 1.62e-129 | 397 |
| MS.gene29013.t1 | AT3G12520 | 39.463 | 484 | 281 | 6 | 74 | 556 | 63 | 535 | 4.32e-112 | 347 |
Find 108 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGCCAAGAACTGCTATTT+TGG | 0.159336 | 3.2:+66518927 | MS.gene29013:CDS |
| CAAACTTTACACATCAAATT+TGG | 0.194351 | 3.2:+66519611 | MS.gene29013:CDS |
| TTAATGTCATACAATAAATT+TGG | 0.204828 | 3.2:-66517371 | None:intergenic |
| CTTGTTTGAGCAGCTTGTTC+TGG | 0.232734 | 3.2:+66519563 | MS.gene29013:intron |
| GCTTGCATGGGAGCATTCTT+TGG | 0.233187 | 3.2:+66518471 | MS.gene29013:CDS |
| TCAAATTTGGCTAACATAAT+TGG | 0.235564 | 3.2:+66519624 | MS.gene29013:CDS |
| TCATATTCCCTATACTTAAC+TGG | 0.244415 | 3.2:+66516282 | MS.gene29013:CDS |
| CTTGCATGGGAGCATTCTTT+GGG | 0.248132 | 3.2:+66518472 | MS.gene29013:CDS |
| GGCAGTGGTTTCTCTCTTGT+TGG | 0.266819 | 3.2:+66516686 | MS.gene29013:CDS |
| TTCCCCAAAATAGCAGTTCT+TGG | 0.283487 | 3.2:-66518931 | None:intergenic |
| TCCTTGAATAAGTTCTGTTT+TGG | 0.295462 | 3.2:-66516161 | None:intergenic |
| ACCACTTATTTATGCTTTCA+TGG | 0.312166 | 3.2:+66516632 | MS.gene29013:CDS |
| TGGTTTGGAAAATAGGATAT+TGG | 0.313803 | 3.2:+66516459 | MS.gene29013:intron |
| TATTCTTCTGCATGCGTAAC+AGG | 0.316301 | 3.2:-66516735 | None:intergenic |
| GCAGTGGTTTCTCTCTTGTT+GGG | 0.317370 | 3.2:+66516687 | MS.gene29013:CDS |
| CCCTTTCAGGTTCTTTCTCT+CGG | 0.326604 | 3.2:+66518238 | MS.gene29013:intron |
| CATCAGTCTTGTGGACTATC+AGG | 0.327508 | 3.2:+66518407 | MS.gene29013:CDS |
| TTGGCCTTGTCACTTGTAAT+AGG | 0.331619 | 3.2:-66518912 | None:intergenic |
| CTATCCCATGCTGCTATTGT+CGG | 0.334142 | 3.2:+66516979 | MS.gene29013:CDS |
| ATACTCTAAGCTTGCACATT+TGG | 0.342714 | 3.2:+66516482 | MS.gene29013:CDS |
| TACTAGCTTCTGTGTATTGT+TGG | 0.347401 | 3.2:-66518984 | None:intergenic |
| CATGGGTTCACATCTAGCTT+TGG | 0.355433 | 3.2:-66519696 | None:intergenic |
| GATATCAATGGGGCAATTGC+TGG | 0.356023 | 3.2:-66517508 | None:intergenic |
| GTACCTTTCTTTAACATAGT+TGG | 0.358549 | 3.2:-66519061 | None:intergenic |
| AGAAGAACAAGAAATTCTTC+TGG | 0.361674 | 3.2:+66517482 | MS.gene29013:CDS |
| ATGAAGGATTATCAATTAGA+TGG | 0.377902 | 3.2:+66517951 | MS.gene29013:CDS |
| TGGTCTTTGAAAGATCTTAG+AGG | 0.380869 | 3.2:-66516224 | None:intergenic |
| GCACATTTGGCACCACAGTA+TGG | 0.381293 | 3.2:+66516495 | MS.gene29013:CDS |
| CAGCTTGTTCTGGCAAATCC+TGG | 0.413117 | 3.2:+66519573 | MS.gene29013:intron |
| TTCTGCTGTCATCAGTCTTG+TGG | 0.413682 | 3.2:+66518398 | MS.gene29013:CDS |
| TCCAAAACAGAACTTATTCA+AGG | 0.417587 | 3.2:+66516160 | MS.gene29013:CDS |
| TGATATTATCTCCGTGTTGA+AGG | 0.418696 | 3.2:+66517089 | MS.gene29013:CDS |
| AACTGGCAAACTATATTAAT+CGG | 0.422167 | 3.2:+66517319 | MS.gene29013:CDS |
| TTTAAAATTGGCGTCATGGC+AGG | 0.425028 | 3.2:+66517785 | MS.gene29013:CDS |
| ACAGAAGCTAGTAAGGTTCC+AGG | 0.431458 | 3.2:+66518994 | MS.gene29013:CDS |
| GAGATAGCATACTCCATGTT+TGG | 0.433528 | 3.2:-66517127 | None:intergenic |
| TTCTATGACTTCTTGTTATG+TGG | 0.437463 | 3.2:+66518016 | MS.gene29013:CDS |
| TAAATTTCATGAACAGATGA+AGG | 0.439342 | 3.2:-66517734 | None:intergenic |
| ACAATACAACTGATATCAAT+GGG | 0.439415 | 3.2:-66517519 | None:intergenic |
| CAACAGCTAAAGGGTTTCCT+TGG | 0.439994 | 3.2:+66517036 | MS.gene29013:CDS |
| GGGATTACACAAGCAACTCT+TGG | 0.440824 | 3.2:+66516792 | MS.gene29013:CDS |
| AATTGCCCTTCAACAGCTAA+AGG | 0.441884 | 3.2:+66517026 | MS.gene29013:CDS |
| GAAGAACAAGAAATTCTTCT+GGG | 0.444848 | 3.2:+66517483 | MS.gene29013:CDS |
| AAGAACATTTGCATCTATGA+AGG | 0.450445 | 3.2:+66517935 | MS.gene29013:CDS |
| GGAAACCCTTTAGCTGTTGA+AGG | 0.451418 | 3.2:-66517032 | None:intergenic |
| TTCTTTAACATAGTTGGAGT+TGG | 0.452253 | 3.2:-66519055 | None:intergenic |
| AATGATGATGGCGGCGAGAA+TGG | 0.456380 | 3.2:-66518376 | None:intergenic |
| TTTGGCTAACATAATTGGTC+AGG | 0.456815 | 3.2:+66519629 | MS.gene29013:CDS |
| ATTGCCCTTCAACAGCTAAA+GGG | 0.458365 | 3.2:+66517027 | MS.gene29013:CDS |
| TGCAAGTCTTTGCATACCTC+AGG | 0.461632 | 3.2:+66516361 | MS.gene29013:CDS |
| CAGTGGTTTCTCTCTTGTTG+GGG | 0.462873 | 3.2:+66516688 | MS.gene29013:CDS |
| AAGGTAAATCACATAGAGAA+AGG | 0.464306 | 3.2:+66517704 | MS.gene29013:intron |
| ATGGCGGCGAGAATGGCATT+TGG | 0.465915 | 3.2:-66518369 | None:intergenic |
| ACAATACACAGAAGCTAGTA+AGG | 0.466966 | 3.2:+66518987 | MS.gene29013:CDS |
| ATTGAAACTTTGTAAGCGTA+TGG | 0.468591 | 3.2:-66516134 | None:intergenic |
| ACTTCTTGTTATGTGGCAAC+TGG | 0.469483 | 3.2:+66518023 | MS.gene29013:CDS |
| AGTTCTCGCGATATAGCAAT+AGG | 0.473447 | 3.2:+66516657 | MS.gene29013:CDS |
| TTTCTTGCAGAATATTAAGA+TGG | 0.474803 | 3.2:+66519157 | MS.gene29013:intron |
| CGACAATAGCAGCATGGGAT+AGG | 0.479296 | 3.2:-66516978 | None:intergenic |
| CAATATTAGAGACTGCAGTT+TGG | 0.479467 | 3.2:-66518287 | None:intergenic |
| GGATTACACAAGCAACTCTT+GGG | 0.490943 | 3.2:+66516793 | MS.gene29013:CDS |
| ATTAGATGGAAACAGAGAAA+TGG | 0.491879 | 3.2:+66517965 | MS.gene29013:CDS |
| CATATTCCCTATACTTAACT+GGG | 0.493178 | 3.2:+66516283 | MS.gene29013:CDS |
| GACAATACAACTGATATCAA+TGG | 0.494922 | 3.2:-66517520 | None:intergenic |
| TTGTCTGTCACTGCTGAACC+AGG | 0.503392 | 3.2:-66519591 | None:intergenic |
| CCACTTATTTATGCTTTCAT+GGG | 0.515118 | 3.2:+66516633 | MS.gene29013:CDS |
| AAATGTTCTTCCAATAGCTA+TGG | 0.529144 | 3.2:-66517922 | None:intergenic |
| ACTCCAACTATGTTAAAGAA+AGG | 0.531555 | 3.2:+66519058 | MS.gene29013:CDS |
| GGCAGGCATGATTGCACTGA+CGG | 0.532067 | 3.2:+66517802 | MS.gene29013:CDS |
| AACAGAGAAATGGTAGCGTT+AGG | 0.534101 | 3.2:+66517975 | MS.gene29013:CDS |
| TTATCAGGTGGAGAATCCAT+TGG | 0.541251 | 3.2:-66516053 | None:intergenic |
| TATGTAACTCTTCAAAGGCA+TGG | 0.541754 | 3.2:-66519373 | None:intergenic |
| AAGAGAGAAACCACTGCCAC+TGG | 0.543890 | 3.2:-66516681 | None:intergenic |
| AGCAATAGGACCAGTGGCAG+TGG | 0.545673 | 3.2:+66516671 | MS.gene29013:CDS |
| TTTAGGGGAGATATAATAGC+TGG | 0.546068 | 3.2:+66516329 | MS.gene29013:CDS |
| TTCAGGTTCTTTCTCTCGGT+CGG | 0.546094 | 3.2:+66518242 | MS.gene29013:intron |
| CCCATGAAAGCATAAATAAG+TGG | 0.547324 | 3.2:-66516633 | None:intergenic |
| TTGTCTGTATCTTTATCAGG+TGG | 0.549737 | 3.2:-66516065 | None:intergenic |
| AGGTTCTTTCTCTCGGTCGG+CGG | 0.551736 | 3.2:+66518245 | MS.gene29013:intron |
| TCGGCGGTAAATTACATGGC+TGG | 0.554084 | 3.2:+66518261 | MS.gene29013:CDS |
| CAGAATATTAAGATGGCTAA+CGG | 0.557714 | 3.2:+66519164 | MS.gene29013:intron |
| AGGTAAATCACATAGAGAAA+GGG | 0.560126 | 3.2:+66517705 | MS.gene29013:intron |
| AGCGGCGATTACCTTGGGAA+AGG | 0.569473 | 3.2:+66517761 | MS.gene29013:CDS |
| TTAGGAACAATGAATGTCGT+TGG | 0.571428 | 3.2:+66517993 | MS.gene29013:CDS |
| GAAACCCTTTAGCTGTTGAA+GGG | 0.577893 | 3.2:-66517031 | None:intergenic |
| ACTTCTATGTAACTCTTCAA+AGG | 0.581904 | 3.2:-66519378 | None:intergenic |
| CAATAAATTTGGCGACCAGA+AGG | 0.585111 | 3.2:-66517360 | None:intergenic |
| AAAACCGACAATAGCAGCAT+GGG | 0.585952 | 3.2:-66516983 | None:intergenic |
| GTATTCTCATCAGCCAAACA+TGG | 0.590091 | 3.2:+66517114 | MS.gene29013:CDS |
| ATGAAAGCATAAATAAGTGG+TGG | 0.604379 | 3.2:-66516630 | None:intergenic |
| ACTCTTACAATCATTACACC+TGG | 0.609301 | 3.2:-66519012 | None:intergenic |
| TCGGTCGGCGGTAAATTACA+TGG | 0.613139 | 3.2:+66518257 | MS.gene29013:CDS |
| ACGGATGAAGAAGCAGTGAA+AGG | 0.618073 | 3.2:+66519183 | MS.gene29013:CDS |
| GATGACAGCAGAAATGATGA+TGG | 0.627258 | 3.2:-66518388 | None:intergenic |
| TTTCTATAGACAGATGTCCC+AGG | 0.630261 | 3.2:-66518958 | None:intergenic |
| TAAAACCGACAATAGCAGCA+TGG | 0.633354 | 3.2:-66516984 | None:intergenic |
| TTGCATGGGAGCATTCTTTG+GGG | 0.638724 | 3.2:+66518473 | MS.gene29013:CDS |
| CGATATAGCAATAGGACCAG+TGG | 0.642615 | 3.2:+66516665 | MS.gene29013:CDS |
| TATTCCCTATACTTAACTGG+GGG | 0.663981 | 3.2:+66516285 | MS.gene29013:CDS |
| ATAACACGCGCAGATAAACA+AGG | 0.670320 | 3.2:+66517559 | MS.gene29013:CDS |
| ATATTCCCTATACTTAACTG+GGG | 0.678687 | 3.2:+66516284 | MS.gene29013:CDS |
| TGAGAATACTGCCTTCAACA+CGG | 0.684095 | 3.2:-66517100 | None:intergenic |
| AGATCCTATTACAAGTGACA+AGG | 0.684935 | 3.2:+66518908 | MS.gene29013:CDS |
| CAACAGCTGCTGCAACAGTG+AGG | 0.697666 | 3.2:-66519662 | None:intergenic |
| GTCTTACATAGTCCATACTG+TGG | 0.710058 | 3.2:-66516507 | None:intergenic |
| GACAGCAGAAATGATGATGG+CGG | 0.713860 | 3.2:-66518385 | None:intergenic |
| CAATACAACTGATATCAATG+GGG | 0.724749 | 3.2:-66517518 | None:intergenic |
| GTTACTGACATCGATACGAG+TGG | 0.726960 | 3.2:+66519347 | MS.gene29013:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTACAATCTTAAAAAATTTA+GGG | + | chr3.2:66516313-66516332 | MS.gene29013:CDS | 10.0% |
| !!! | TTATTATATCTGAAATATTT+AGG | + | chr3.2:66517412-66517431 | MS.gene29013:intron | 10.0% |
| !! | AACACTTATAAAAAAAATCT+TGG | - | chr3.2:66516547-66516566 | None:intergenic | 15.0% |
| !! | ATATAATAATAAGATGAAGT+AGG | - | chr3.2:66517401-66517420 | None:intergenic | 15.0% |
| !! | GATATAAATTATGATACTAT+AGG | + | chr3.2:66519498-66519517 | MS.gene29013:intron | 15.0% |
| !! | GTTACAATCTTAAAAAATTT+AGG | + | chr3.2:66516312-66516331 | MS.gene29013:CDS | 15.0% |
| !! | TACAATCTTAAAAAATTTAG+GGG | + | chr3.2:66516314-66516333 | MS.gene29013:CDS | 15.0% |
| !! | TATAATAATAAGATGAAGTA+GGG | - | chr3.2:66517400-66517419 | None:intergenic | 15.0% |
| !! | TTAATGTCATACAATAAATT+TGG | - | chr3.2:66517374-66517393 | None:intergenic | 15.0% |
| !!! | GATTTTTTTTATAAGTGTTT+TGG | + | chr3.2:66516548-66516567 | MS.gene29013:intron | 15.0% |
| !! | AAATTATGATACTATAGGAT+AGG | + | chr3.2:66519503-66519522 | MS.gene29013:intron | 20.0% |
| !! | ATATTTGATGTTCTTATACT+TGG | + | chr3.2:66516439-66516458 | MS.gene29013:intron | 20.0% |
| !! | TGTTATGAATACAAAAAAAG+TGG | - | chr3.2:66517545-66517564 | None:intergenic | 20.0% |
| !! | TTGTTTCAATGTATAAACAA+AGG | - | chr3.2:66519100-66519119 | None:intergenic | 20.0% |
| !!! | ACATTTTAGTTTTAATTCCA+AGG | - | chr3.2:66517056-66517075 | None:intergenic | 20.0% |
| !!! | CTAATTAAACTATTGCATTT+TGG | + | chr3.2:66517888-66517907 | MS.gene29013:intron | 20.0% |
| !!! | GTTCATGAAATTTATTTTAG+CGG | + | chr3.2:66517743-66517762 | MS.gene29013:CDS | 20.0% |
| !!! | TAATATTTAACATTTTGCAG+TGG | + | chr3.2:66517296-66517315 | MS.gene29013:intron | 20.0% |
| !!! | TGGTAGGAAATTTTAATATT+AGG | - | chr3.2:66517239-66517258 | None:intergenic | 20.0% |
| !!! | TTCATACATCTACAATTTTA+TGG | + | chr3.2:66518133-66518152 | MS.gene29013:intron | 20.0% |
| ! | AACTGGCAAACTATATTAAT+CGG | + | chr3.2:66517319-66517338 | MS.gene29013:CDS | 25.0% |
| ! | ACAATACAACTGATATCAAT+GGG | - | chr3.2:66517522-66517541 | None:intergenic | 25.0% |
| ! | AGCATAGTATAACTAAGATT+TGG | - | chr3.2:66518544-66518563 | None:intergenic | 25.0% |
| ! | AGCTTCTTCATATACATAAA+TGG | - | chr3.2:66519457-66519476 | None:intergenic | 25.0% |
| ! | AGTATTAATCAGAATGTGAA+TGG | - | chr3.2:66517614-66517633 | None:intergenic | 25.0% |
| ! | ATAATAAAGTACATAGACTC+CGG | - | chr3.2:66518719-66518738 | None:intergenic | 25.0% |
| ! | ATATCACAGCAATTTAAACA+AGG | + | chr3.2:66518768-66518787 | MS.gene29013:intron | 25.0% |
| ! | ATGAAGGATTATCAATTAGA+TGG | + | chr3.2:66517951-66517970 | MS.gene29013:CDS | 25.0% |
| ! | CAAACTTTACACATCAAATT+TGG | + | chr3.2:66519611-66519630 | MS.gene29013:CDS | 25.0% |
| ! | CAACCTTAAATTTAAAGACT+AGG | + | chr3.2:66518621-66518640 | MS.gene29013:intron | 25.0% |
| ! | TAAATTTCATGAACAGATGA+AGG | - | chr3.2:66517737-66517756 | None:intergenic | 25.0% |
| ! | TAGAAAACTGTTGAAGTAAA+TGG | - | chr3.2:66517871-66517890 | None:intergenic | 25.0% |
| ! | TATGAGGCTAAAACAAATTA+AGG | - | chr3.2:66519275-66519294 | None:intergenic | 25.0% |
| ! | TCAAAAATTGAATTCTTGTG+TGG | - | chr3.2:66519215-66519234 | None:intergenic | 25.0% |
| ! | TCAAATTTGGCTAACATAAT+TGG | + | chr3.2:66519624-66519643 | MS.gene29013:CDS | 25.0% |
| ! | TCTCAAGAAAAAGTTCAAAT+TGG | - | chr3.2:66519124-66519143 | None:intergenic | 25.0% |
| ! | TGATGATCTTATAACTGAAT+CGG | + | chr3.2:66516907-66516926 | MS.gene29013:intron | 25.0% |
| ! | TGTCAAAGTAATTCCTAATA+GGG | + | chr3.2:66518570-66518589 | MS.gene29013:intron | 25.0% |
| ! | TTGTCAAAGTAATTCCTAAT+AGG | + | chr3.2:66518569-66518588 | MS.gene29013:intron | 25.0% |
| ! | TTTATGTATATGAAGAAGCT+TGG | + | chr3.2:66519457-66519476 | MS.gene29013:intron | 25.0% |
| ! | TTTCAATGTATAAACAAAGG+AGG | - | chr3.2:66519097-66519116 | None:intergenic | 25.0% |
| ! | TTTCTTGCAGAATATTAAGA+TGG | + | chr3.2:66519157-66519176 | MS.gene29013:intron | 25.0% |
| !! | AGTCCTAGTCTTTAAATTTA+AGG | - | chr3.2:66518627-66518646 | None:intergenic | 25.0% |
| !! | AGTCTAAAACAAATTACTCA+AGG | - | chr3.2:66519300-66519319 | None:intergenic | 25.0% |
| !! | ATGTTTCTTTTACAGTGTAT+TGG | - | chr3.2:66516190-66516209 | None:intergenic | 25.0% |
| !! | CTAGTCTTTAAATTTAAGGT+TGG | - | chr3.2:66518623-66518642 | None:intergenic | 25.0% |
| !! | TTTGGAGTGTATTTAAAAAG+AGG | - | chr3.2:66518354-66518373 | None:intergenic | 25.0% |
| !! | TTTTTGTCTGTATCTTTATC+AGG | - | chr3.2:66516071-66516090 | None:intergenic | 25.0% |
| !!! | ACATCAAAAAAGTTGATACT+TGG | + | chr3.2:66516251-66516270 | MS.gene29013:CDS | 25.0% |
| !!! | ACTATTGCATTTTGGTTTTT+AGG | + | chr3.2:66517896-66517915 | MS.gene29013:intron | 25.0% |
| !!! | AGGAAATTTTAATATTAGGC+AGG | - | chr3.2:66517235-66517254 | None:intergenic | 25.0% |
| !!! | ATTTCATGTTGTGTTGATTA+GGG | + | chr3.2:66517457-66517476 | MS.gene29013:intron | 25.0% |
| !!! | CAGACAACAGTTTTTAATTT+CGG | + | chr3.2:66518085-66518104 | MS.gene29013:intron | 25.0% |
| !!! | GGAAATTTTAATATTAGGCA+GGG | - | chr3.2:66517234-66517253 | None:intergenic | 25.0% |
| !!! | TATTTCATGTTGTGTTGATT+AGG | + | chr3.2:66517456-66517475 | MS.gene29013:intron | 25.0% |
| !!! | TCAACTTTTTTGATGTACTT+TGG | - | chr3.2:66516247-66516266 | None:intergenic | 25.0% |
| !!! | TTATACTTGGTTTGGAAAAT+AGG | + | chr3.2:66516452-66516471 | MS.gene29013:intron | 25.0% |
| AAATGTTCTTCCAATAGCTA+TGG | - | chr3.2:66517925-66517944 | None:intergenic | 30.0% | |
| AAGAACATTTGCATCTATGA+AGG | + | chr3.2:66517935-66517954 | MS.gene29013:CDS | 30.0% | |
| AAGGTAAATCACATAGAGAA+AGG | + | chr3.2:66517704-66517723 | MS.gene29013:intron | 30.0% | |
| ACAAAGCTTGAATCTGTAAA+AGG | - | chr3.2:66516609-66516628 | None:intergenic | 30.0% | |
| ACCACTTATTTATGCTTTCA+TGG | + | chr3.2:66516632-66516651 | MS.gene29013:CDS | 30.0% | |
| ACTCCAACTATGTTAAAGAA+AGG | + | chr3.2:66519058-66519077 | MS.gene29013:CDS | 30.0% | |
| ACTTCTATGTAACTCTTCAA+AGG | - | chr3.2:66519381-66519400 | None:intergenic | 30.0% | |
| AGAAGAACAAGAAATTCTTC+TGG | + | chr3.2:66517482-66517501 | MS.gene29013:CDS | 30.0% | |
| AGATACAGACAAAAACAAGA+TGG | + | chr3.2:66516076-66516095 | MS.gene29013:CDS | 30.0% | |
| AGGTAAATCACATAGAGAAA+GGG | + | chr3.2:66517705-66517724 | MS.gene29013:intron | 30.0% | |
| ATATTCCCTATACTTAACTG+GGG | + | chr3.2:66516284-66516303 | MS.gene29013:CDS | 30.0% | |
| ATTAGATGGAAACAGAGAAA+TGG | + | chr3.2:66517965-66517984 | MS.gene29013:CDS | 30.0% | |
| ATTGAAACTTTGTAAGCGTA+TGG | - | chr3.2:66516137-66516156 | None:intergenic | 30.0% | |
| ATTGTGATTATATGTTGCAG+CGG | + | chr3.2:66519325-66519344 | MS.gene29013:intron | 30.0% | |
| CAAAATTAATCATGTCTGCT+AGG | + | chr3.2:66519426-66519445 | MS.gene29013:intron | 30.0% | |
| CAAAGCTTGAATCTGTAAAA+GGG | - | chr3.2:66516608-66516627 | None:intergenic | 30.0% | |
| CAAATTACTCAAGGAATATG+AGG | - | chr3.2:66519291-66519310 | None:intergenic | 30.0% | |
| CAATACAACTGATATCAATG+GGG | - | chr3.2:66517521-66517540 | None:intergenic | 30.0% | |
| CAGAATATTAAGATGGCTAA+CGG | + | chr3.2:66519164-66519183 | MS.gene29013:intron | 30.0% | |
| CATATTCCCTATACTTAACT+GGG | + | chr3.2:66516283-66516302 | MS.gene29013:CDS | 30.0% | |
| CCACTTATTTATGCTTTCAT+GGG | + | chr3.2:66516633-66516652 | MS.gene29013:CDS | 30.0% | |
| GAAGAACAAGAAATTCTTCT+GGG | + | chr3.2:66517483-66517502 | MS.gene29013:CDS | 30.0% | |
| GACAATACAACTGATATCAA+TGG | - | chr3.2:66517523-66517542 | None:intergenic | 30.0% | |
| GATTTACCTTCACATATCAA+TGG | - | chr3.2:66517694-66517713 | None:intergenic | 30.0% | |
| GTACCTTTCTTTAACATAGT+TGG | - | chr3.2:66519064-66519083 | None:intergenic | 30.0% | |
| GTCAAAGTAATTCCTAATAG+GGG | + | chr3.2:66518571-66518590 | MS.gene29013:intron | 30.0% | |
| TCAAACAAGAAACATACTCT+TGG | - | chr3.2:66519552-66519571 | None:intergenic | 30.0% | |
| TCATAAGTCAAAATTACCTG+AGG | - | chr3.2:66516380-66516399 | None:intergenic | 30.0% | |
| TCATATTCCCTATACTTAAC+TGG | + | chr3.2:66516282-66516301 | MS.gene29013:CDS | 30.0% | |
| TCCAAAACAGAACTTATTCA+AGG | + | chr3.2:66516160-66516179 | MS.gene29013:CDS | 30.0% | |
| TGAAACCTGTCACAAAAATA+AGG | - | chr3.2:66518875-66518894 | None:intergenic | 30.0% | |
| TGATGTTCTTATACTTGGTT+TGG | + | chr3.2:66516444-66516463 | MS.gene29013:intron | 30.0% | |
| TTCTGTCAAAAAACCAGATT+AGG | + | chr3.2:66516940-66516959 | MS.gene29013:intron | 30.0% | |
| TTCTTTAACATAGTTGGAGT+TGG | - | chr3.2:66519058-66519077 | None:intergenic | 30.0% | |
| TTTAAAGACTAGGACTAAGT+AGG | + | chr3.2:66518631-66518650 | MS.gene29013:intron | 30.0% | |
| ! | ATGAAAGCATAAATAAGTGG+TGG | - | chr3.2:66516633-66516652 | None:intergenic | 30.0% |
| ! | TCCTTGAATAAGTTCTGTTT+TGG | - | chr3.2:66516164-66516183 | None:intergenic | 30.0% |
| ! | TGGTTTGGAAAATAGGATAT+TGG | + | chr3.2:66516459-66516478 | MS.gene29013:intron | 30.0% |
| ! | TTCTATGACTTCTTGTTATG+TGG | + | chr3.2:66518016-66518035 | MS.gene29013:CDS | 30.0% |
| ! | TTTTGACCATTGATATGTGA+AGG | + | chr3.2:66517685-66517704 | MS.gene29013:intron | 30.0% |
| !! | GGTCAAAAACTTTAGTTCTA+TGG | - | chr3.2:66517673-66517692 | None:intergenic | 30.0% |
| !! | TCTTGAAAAAAGAAGTGTTC+AGG | + | chr3.2:66519400-66519419 | MS.gene29013:CDS | 30.0% |
| !! | TTGAATAAGTTCTGTTTTGG+AGG | - | chr3.2:66516161-66516180 | None:intergenic | 30.0% |
| !!! | CAATTTTAAAACCTTTCCCA+AGG | - | chr3.2:66517775-66517794 | None:intergenic | 30.0% |
| !!! | CTTGGGAAAGGTTTTAAAAT+TGG | + | chr3.2:66517773-66517792 | MS.gene29013:CDS | 30.0% |
| ACAATACACAGAAGCTAGTA+AGG | + | chr3.2:66518987-66519006 | MS.gene29013:CDS | 35.0% | |
| ACTCTTACAATCATTACACC+TGG | - | chr3.2:66519015-66519034 | None:intergenic | 35.0% | |
| AGATCCTATTACAAGTGACA+AGG | + | chr3.2:66518908-66518927 | MS.gene29013:CDS | 35.0% | |
| ATACTCTAAGCTTGCACATT+TGG | + | chr3.2:66516482-66516501 | MS.gene29013:CDS | 35.0% | |
| CAATATTAGAGACTGCAGTT+TGG | - | chr3.2:66518290-66518309 | None:intergenic | 35.0% | |
| GGAGAAATACTCATAAAGAG+AGG | - | chr3.2:66517850-66517869 | None:intergenic | 35.0% | |
| GTCAATCAAGAATCCTAATC+TGG | - | chr3.2:66516956-66516975 | None:intergenic | 35.0% | |
| TATGTAACTCTTCAAAGGCA+TGG | - | chr3.2:66519376-66519395 | None:intergenic | 35.0% | |
| TATTCCCTATACTTAACTGG+GGG | + | chr3.2:66516285-66516304 | MS.gene29013:CDS | 35.0% | |
| TGATATTATCTCCGTGTTGA+AGG | + | chr3.2:66517089-66517108 | MS.gene29013:CDS | 35.0% | |
| TGTAATCCCAGCAAAAAAAG+TGG | - | chr3.2:66516781-66516800 | None:intergenic | 35.0% | |
| TTAGGAACAATGAATGTCGT+TGG | + | chr3.2:66517993-66518012 | MS.gene29013:CDS | 35.0% | |
| TTGTCTGTATCTTTATCAGG+TGG | - | chr3.2:66516068-66516087 | None:intergenic | 35.0% | |
| TTTAGGGGAGATATAATAGC+TGG | + | chr3.2:66516329-66516348 | MS.gene29013:CDS | 35.0% | |
| TTTGGCTAACATAATTGGTC+AGG | + | chr3.2:66519629-66519648 | MS.gene29013:CDS | 35.0% | |
| ! | CCCATGAAAGCATAAATAAG+TGG | - | chr3.2:66516636-66516655 | None:intergenic | 35.0% |
| ! | TACTAGCTTCTGTGTATTGT+TGG | - | chr3.2:66518987-66519006 | None:intergenic | 35.0% |
| ! | TGGTCTTTGAAAGATCTTAG+AGG | - | chr3.2:66516227-66516246 | None:intergenic | 35.0% |
| ! | TTAACATTTTGCAGTGGAAC+TGG | + | chr3.2:66517302-66517321 | MS.gene29013:intron | 35.0% |
| !! | ATCAGGCAGCAATTTTGATA+TGG | + | chr3.2:66518424-66518443 | MS.gene29013:CDS | 35.0% |
| !! | ATTCGATTTTGTTGCTTGCA+TGG | + | chr3.2:66518458-66518477 | MS.gene29013:CDS | 35.0% |
| !! | TTCGATTTTGTTGCTTGCAT+GGG | + | chr3.2:66518459-66518478 | MS.gene29013:CDS | 35.0% |
| !! | TTTTAGGAAGCCATAGCTAT+TGG | + | chr3.2:66517912-66517931 | MS.gene29013:intron | 35.0% |
| !!! | AAGCTTTTTGAGTTTCCTTC+TGG | + | chr3.2:66517345-66517364 | MS.gene29013:CDS | 35.0% |
| !!! | AGGTTTTAAAATTGGCGTCA+TGG | + | chr3.2:66517781-66517800 | MS.gene29013:CDS | 35.0% |
| !!! | GATCGATTTTTTTCCCTTTC+AGG | + | chr3.2:66518225-66518244 | MS.gene29013:intron | 35.0% |
| !!! | TGAGACCTTATTTTTGTGAC+AGG | + | chr3.2:66518867-66518886 | MS.gene29013:intron | 35.0% |
| !!! | TTACTGCCACTTTTTTTGCT+GGG | + | chr3.2:66516772-66516791 | MS.gene29013:CDS | 35.0% |
| !!! | TTTACTGCCACTTTTTTTGC+TGG | + | chr3.2:66516771-66516790 | MS.gene29013:CDS | 35.0% |
| AAAACCGACAATAGCAGCAT+GGG | - | chr3.2:66516986-66517005 | None:intergenic | 40.0% | |
| AATTGCCCTTCAACAGCTAA+AGG | + | chr3.2:66517026-66517045 | MS.gene29013:CDS | 40.0% | |
| AGATTCTCGCATAGCATAAC+CGG | + | chr3.2:66518697-66518716 | MS.gene29013:intron | 40.0% | |
| AGTGTAACATTAGTAGCAGC+TGG | - | chr3.2:66516874-66516893 | None:intergenic | 40.0% | |
| AGTTCTCGCGATATAGCAAT+AGG | + | chr3.2:66516657-66516676 | MS.gene29013:CDS | 40.0% | |
| ATAACACGCGCAGATAAACA+AGG | + | chr3.2:66517559-66517578 | MS.gene29013:CDS | 40.0% | |
| ATTGCCCTTCAACAGCTAAA+GGG | + | chr3.2:66517027-66517046 | MS.gene29013:CDS | 40.0% | |
| CAATAAATTTGGCGACCAGA+AGG | - | chr3.2:66517363-66517382 | None:intergenic | 40.0% | |
| GAAACCCTTTAGCTGTTGAA+GGG | - | chr3.2:66517034-66517053 | None:intergenic | 40.0% | |
| GAGATAGCATACTCCATGTT+TGG | - | chr3.2:66517130-66517149 | None:intergenic | 40.0% | |
| GATGACAGCAGAAATGATGA+TGG | - | chr3.2:66518391-66518410 | None:intergenic | 40.0% | |
| GCTGGTAGTACATGTATATC+CGG | - | chr3.2:66516856-66516875 | None:intergenic | 40.0% | |
| GGATTACACAAGCAACTCTT+GGG | + | chr3.2:66516793-66516812 | MS.gene29013:CDS | 40.0% | |
| GTATTCTCATCAGCCAAACA+TGG | + | chr3.2:66517114-66517133 | MS.gene29013:CDS | 40.0% | |
| GTCTTACATAGTCCATACTG+TGG | - | chr3.2:66516510-66516529 | None:intergenic | 40.0% | |
| GTCTTATGTACACCCCTATT+AGG | - | chr3.2:66518586-66518605 | None:intergenic | 40.0% | |
| TAAAACCGACAATAGCAGCA+TGG | - | chr3.2:66516987-66517006 | None:intergenic | 40.0% | |
| TATTCTTCTGCATGCGTAAC+AGG | - | chr3.2:66516738-66516757 | None:intergenic | 40.0% | |
| TGAGAATACTGCCTTCAACA+CGG | - | chr3.2:66517103-66517122 | None:intergenic | 40.0% | |
| TTCCCCAAAATAGCAGTTCT+TGG | - | chr3.2:66518934-66518953 | None:intergenic | 40.0% | |
| TTCTCCCCCAGTTAAGTATA+GGG | - | chr3.2:66516292-66516311 | None:intergenic | 40.0% | |
| TTGCAAACATACACACTGGT+AGG | - | chr3.2:66517255-66517274 | None:intergenic | 40.0% | |
| TTTCTATAGACAGATGTCCC+AGG | - | chr3.2:66518961-66518980 | None:intergenic | 40.0% | |
| ! | AACAGAGAAATGGTAGCGTT+AGG | + | chr3.2:66517975-66517994 | MS.gene29013:CDS | 40.0% |
| ! | AAGCAACTCTTGGGATTTTC+AGG | + | chr3.2:66516802-66516821 | MS.gene29013:CDS | 40.0% |
| ! | ACTTCTTGTTATGTGGCAAC+TGG | + | chr3.2:66518023-66518042 | MS.gene29013:CDS | 40.0% |
| ! | GTTTTCGTCTCTGTTGAGAT+AGG | + | chr3.2:66518498-66518517 | MS.gene29013:CDS | 40.0% |
| ! | TTTAAAATTGGCGTCATGGC+AGG | + | chr3.2:66517785-66517804 | MS.gene29013:CDS | 40.0% |
| !! | AAGGCCAAGAACTGCTATTT+TGG | + | chr3.2:66518927-66518946 | MS.gene29013:CDS | 40.0% |
| !! | ATTTTAGCGGCGATTACCTT+GGG | + | chr3.2:66517756-66517775 | MS.gene29013:CDS | 40.0% |
| !! | CTATTTTGGGGAAGATTCCT+GGG | + | chr3.2:66518941-66518960 | MS.gene29013:CDS | 40.0% |
| !! | TTGGCCTTGTCACTTGTAAT+AGG | - | chr3.2:66518915-66518934 | None:intergenic | 40.0% |
| !!! | AGGCCAAGAACTGCTATTTT+GGG | + | chr3.2:66518928-66518947 | MS.gene29013:CDS | 40.0% |
| !!! | CTGCTATTGTCGGTTTTATG+GGG | + | chr3.2:66516989-66517008 | MS.gene29013:CDS | 40.0% |
| !!! | GCTGCTATTGTCGGTTTTAT+GGG | + | chr3.2:66516988-66517007 | MS.gene29013:CDS | 40.0% |
| !!! | TATTTTAGCGGCGATTACCT+TGG | + | chr3.2:66517755-66517774 | MS.gene29013:CDS | 40.0% |
| !!! | TGCTATTGTCGGTTTTATGG+GGG | + | chr3.2:66516990-66517009 | MS.gene29013:CDS | 40.0% |
| !!! | TGCTGCTATTGTCGGTTTTA+TGG | + | chr3.2:66516987-66517006 | MS.gene29013:CDS | 40.0% |
| ACAGAAGCTAGTAAGGTTCC+AGG | + | chr3.2:66518994-66519013 | MS.gene29013:CDS | 45.0% | |
| ACCGAGAGAAAGAACCTGAA+AGG | - | chr3.2:66518242-66518261 | None:intergenic | 45.0% | |
| ACGGATGAAGAAGCAGTGAA+AGG | + | chr3.2:66519183-66519202 | MS.gene29013:CDS | 45.0% | |
| CAACAGCTAAAGGGTTTCCT+TGG | + | chr3.2:66517036-66517055 | MS.gene29013:CDS | 45.0% | |
| CAGTGGTTTCTCTCTTGTTG+GGG | + | chr3.2:66516688-66516707 | MS.gene29013:CDS | 45.0% | |
| CCGAGAGAAAGAACCTGAAA+GGG | - | chr3.2:66518241-66518260 | None:intergenic | 45.0% | |
| CGATATAGCAATAGGACCAG+TGG | + | chr3.2:66516665-66516684 | MS.gene29013:CDS | 45.0% | |
| CTATCCCATGCTGCTATTGT+CGG | + | chr3.2:66516979-66516998 | MS.gene29013:CDS | 45.0% | |
| CTTCTCCCCCAGTTAAGTAT+AGG | - | chr3.2:66516293-66516312 | None:intergenic | 45.0% | |
| GATATCAATGGGGCAATTGC+TGG | - | chr3.2:66517511-66517530 | None:intergenic | 45.0% | |
| GCACTTGCAAACATACACAC+TGG | - | chr3.2:66517259-66517278 | None:intergenic | 45.0% | |
| GCAGTGGTTTCTCTCTTGTT+GGG | + | chr3.2:66516687-66516706 | MS.gene29013:CDS | 45.0% | |
| GGAAACCCTTTAGCTGTTGA+AGG | - | chr3.2:66517035-66517054 | None:intergenic | 45.0% | |
| GGGATTACACAAGCAACTCT+TGG | + | chr3.2:66516792-66516811 | MS.gene29013:CDS | 45.0% | |
| GTTACTGACATCGATACGAG+TGG | + | chr3.2:66519347-66519366 | MS.gene29013:CDS | 45.0% | |
| TGCAAGTCTTTGCATACCTC+AGG | + | chr3.2:66516361-66516380 | MS.gene29013:CDS | 45.0% | |
| TTCTGCTGTCATCAGTCTTG+TGG | + | chr3.2:66518398-66518417 | MS.gene29013:CDS | 45.0% | |
| ! | CATCAGTCTTGTGGACTATC+AGG | + | chr3.2:66518407-66518426 | MS.gene29013:CDS | 45.0% |
| ! | CATGGGTTCACATCTAGCTT+TGG | - | chr3.2:66519699-66519718 | None:intergenic | 45.0% |
| ! | CTTGTTTGAGCAGCTTGTTC+TGG | + | chr3.2:66519563-66519582 | MS.gene29013:intron | 45.0% |
| ! | TTCAGGTTCTTTCTCTCGGT+CGG | + | chr3.2:66518242-66518261 | MS.gene29013:intron | 45.0% |
| !! | CCCTTTCAGGTTCTTTCTCT+CGG | + | chr3.2:66518238-66518257 | MS.gene29013:intron | 45.0% |
| !! | CTTGCATGGGAGCATTCTTT+GGG | + | chr3.2:66518472-66518491 | MS.gene29013:CDS | 45.0% |
| !! | GACAGCAGAAATGATGATGG+CGG | - | chr3.2:66518388-66518407 | None:intergenic | 45.0% |
| !! | GCTATTTTGGGGAAGATTCC+TGG | + | chr3.2:66518940-66518959 | MS.gene29013:CDS | 45.0% |
| !! | TTGCATGGGAGCATTCTTTG+GGG | + | chr3.2:66518473-66518492 | MS.gene29013:CDS | 45.0% |
| !!! | GCTATTGTCGGTTTTATGGG+GGG | + | chr3.2:66516991-66517010 | MS.gene29013:CDS | 45.0% |
| !!! | GGCCAAGAACTGCTATTTTG+GGG | + | chr3.2:66518929-66518948 | MS.gene29013:CDS | 45.0% |
| AAGAGAGAAACCACTGCCAC+TGG | - | chr3.2:66516684-66516703 | None:intergenic | 50.0% | |
| CGACAATAGCAGCATGGGAT+AGG | - | chr3.2:66516981-66517000 | None:intergenic | 50.0% | |
| GCACATTTGGCACCACAGTA+TGG | + | chr3.2:66516495-66516514 | MS.gene29013:CDS | 50.0% | |
| GGCAGTGGTTTCTCTCTTGT+TGG | + | chr3.2:66516686-66516705 | MS.gene29013:CDS | 50.0% | |
| TCGGCGGTAAATTACATGGC+TGG | + | chr3.2:66518261-66518280 | MS.gene29013:CDS | 50.0% | |
| TCGGTCGGCGGTAAATTACA+TGG | + | chr3.2:66518257-66518276 | MS.gene29013:CDS | 50.0% | |
| TTGTCTGTCACTGCTGAACC+AGG | - | chr3.2:66519594-66519613 | None:intergenic | 50.0% | |
| ! | CAGCTTGTTCTGGCAAATCC+TGG | + | chr3.2:66519573-66519592 | MS.gene29013:intron | 50.0% |
| ! | CGAAGCACTAACACAGACAC+CGG | + | chr3.2:66516834-66516853 | MS.gene29013:intron | 50.0% |
| !! | AATGATGATGGCGGCGAGAA+TGG | - | chr3.2:66518379-66518398 | None:intergenic | 50.0% |
| !! | GCTTGCATGGGAGCATTCTT+TGG | + | chr3.2:66518471-66518490 | MS.gene29013:CDS | 50.0% |
| AGCAATAGGACCAGTGGCAG+TGG | + | chr3.2:66516671-66516690 | MS.gene29013:CDS | 55.0% | |
| AGCGGCGATTACCTTGGGAA+AGG | + | chr3.2:66517761-66517780 | MS.gene29013:CDS | 55.0% | |
| AGGTTCTTTCTCTCGGTCGG+CGG | + | chr3.2:66518245-66518264 | MS.gene29013:intron | 55.0% | |
| ATGGCGGCGAGAATGGCATT+TGG | - | chr3.2:66518372-66518391 | None:intergenic | 55.0% | |
| CAACAGCTGCTGCAACAGTG+AGG | - | chr3.2:66519665-66519684 | None:intergenic | 55.0% | |
| GGCAGGCATGATTGCACTGA+CGG | + | chr3.2:66517802-66517821 | MS.gene29013:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 66516056 | 66519719 | 66516056 | ID=MS.gene29013 |
| chr3.2 | mRNA | 66516056 | 66519719 | 66516056 | ID=MS.gene29013.t1;Parent=MS.gene29013 |
| chr3.2 | exon | 66516056 | 66516382 | 66516056 | ID=MS.gene29013.t1.exon1;Parent=MS.gene29013.t1 |
| chr3.2 | CDS | 66516056 | 66516382 | 66516056 | ID=cds.MS.gene29013.t1;Parent=MS.gene29013.t1 |
| chr3.2 | exon | 66516474 | 66516522 | 66516474 | ID=MS.gene29013.t1.exon2;Parent=MS.gene29013.t1 |
| chr3.2 | CDS | 66516474 | 66516522 | 66516474 | ID=cds.MS.gene29013.t1;Parent=MS.gene29013.t1 |
| chr3.2 | exon | 66516616 | 66516823 | 66516616 | ID=MS.gene29013.t1.exon3;Parent=MS.gene29013.t1 |
| chr3.2 | CDS | 66516616 | 66516823 | 66516616 | ID=cds.MS.gene29013.t1;Parent=MS.gene29013.t1 |
| chr3.2 | exon | 66516957 | 66517137 | 66516957 | ID=MS.gene29013.t1.exon4;Parent=MS.gene29013.t1 |
| chr3.2 | CDS | 66516957 | 66517137 | 66516957 | ID=cds.MS.gene29013.t1;Parent=MS.gene29013.t1 |
| chr3.2 | exon | 66517316 | 66517381 | 66517316 | ID=MS.gene29013.t1.exon5;Parent=MS.gene29013.t1 |
| chr3.2 | CDS | 66517316 | 66517381 | 66517316 | ID=cds.MS.gene29013.t1;Parent=MS.gene29013.t1 |
| chr3.2 | exon | 66517478 | 66517591 | 66517478 | ID=MS.gene29013.t1.exon6;Parent=MS.gene29013.t1 |
| chr3.2 | CDS | 66517478 | 66517591 | 66517478 | ID=cds.MS.gene29013.t1;Parent=MS.gene29013.t1 |
| chr3.2 | exon | 66517707 | 66517823 | 66517707 | ID=MS.gene29013.t1.exon7;Parent=MS.gene29013.t1 |
| chr3.2 | CDS | 66517707 | 66517823 | 66517707 | ID=cds.MS.gene29013.t1;Parent=MS.gene29013.t1 |
| chr3.2 | exon | 66517918 | 66518044 | 66517918 | ID=MS.gene29013.t1.exon8;Parent=MS.gene29013.t1 |
| chr3.2 | CDS | 66517918 | 66518044 | 66517918 | ID=cds.MS.gene29013.t1;Parent=MS.gene29013.t1 |
| chr3.2 | exon | 66518247 | 66518533 | 66518247 | ID=MS.gene29013.t1.exon9;Parent=MS.gene29013.t1 |
| chr3.2 | CDS | 66518247 | 66518533 | 66518247 | ID=cds.MS.gene29013.t1;Parent=MS.gene29013.t1 |
| chr3.2 | exon | 66518889 | 66519079 | 66518889 | ID=MS.gene29013.t1.exon10;Parent=MS.gene29013.t1 |
| chr3.2 | CDS | 66518889 | 66519079 | 66518889 | ID=cds.MS.gene29013.t1;Parent=MS.gene29013.t1 |
| chr3.2 | exon | 66519167 | 66519249 | 66519167 | ID=MS.gene29013.t1.exon11;Parent=MS.gene29013.t1 |
| chr3.2 | CDS | 66519167 | 66519249 | 66519167 | ID=cds.MS.gene29013.t1;Parent=MS.gene29013.t1 |
| chr3.2 | exon | 66519345 | 66519421 | 66519345 | ID=MS.gene29013.t1.exon12;Parent=MS.gene29013.t1 |
| chr3.2 | CDS | 66519345 | 66519421 | 66519345 | ID=cds.MS.gene29013.t1;Parent=MS.gene29013.t1 |
| chr3.2 | exon | 66519576 | 66519719 | 66519576 | ID=MS.gene29013.t1.exon13;Parent=MS.gene29013.t1 |
| chr3.2 | CDS | 66519576 | 66519719 | 66519576 | ID=cds.MS.gene29013.t1;Parent=MS.gene29013.t1 |
| Gene Sequence |
| Protein sequence |
