AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053673

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053673.t1 MTR_5g061880 86.728 648 15 5 1 583 14 655 0.0 1103
MS.gene053673.t1 MTR_3g073780 73.846 650 96 7 1 583 17 659 0.0 909
MS.gene053673.t1 MTR_3g073780 73.657 577 78 7 1 510 17 586 0.0 798
MS.gene053673.t1 MTR_2g008470 62.578 644 165 8 4 578 18 654 0.0 778
MS.gene053673.t1 MTR_2g008470 62.578 644 165 8 4 578 37 673 0.0 777
MS.gene053673.t1 MTR_3g073780 73.406 549 73 6 1 482 17 559 0.0 757
MS.gene053673.t1 MTR_1g071530 47.702 631 260 5 17 583 21 645 0.0 582
MS.gene053673.t1 MTR_7g095430 46.314 624 265 5 17 576 18 635 0.0 570
MS.gene053673.t1 MTR_2g102243 46.910 631 265 5 17 583 23 647 0.0 567
MS.gene053673.t1 MTR_4g084620 45.581 645 277 8 1 579 1 637 0.0 558
MS.gene053673.t1 MTR_3g087740 47.903 620 246 10 23 575 40 649 0.0 556
MS.gene053673.t1 MTR_5g061860 46.530 634 254 9 22 580 29 652 0.0 554
MS.gene053673.t1 MTR_4g011970 45.642 631 273 5 17 583 30 654 0.0 550
MS.gene053673.t1 MTR_3g073730 47.117 607 245 7 47 583 60 660 0.0 544
MS.gene053673.t1 MTR_4g084640 46.215 634 263 7 17 583 22 644 0.0 541
MS.gene053673.t1 MTR_7g095430 46.595 558 228 5 17 510 18 569 5.10e-177 513
MS.gene053673.t1 MTR_2g102243 46.953 558 226 5 17 510 23 574 5.42e-176 511
MS.gene053673.t1 MTR_5g061860 47.477 535 198 7 22 482 29 554 2.93e-164 480
MS.gene053673.t1 MTR_6g086170 37.441 633 321 6 12 579 5 627 5.68e-152 451
MS.gene053673.t1 MTR_3g087730 36.437 623 307 14 34 580 49 658 8.71e-128 390
MS.gene053673.t1 MTR_7g022870 32.939 592 323 11 46 575 57 636 4.79e-101 322
MS.gene053673.t1 MTR_7g022870 33.017 527 279 11 46 510 57 571 1.39e-83 272
MS.gene053673.t1 MTR_6g024420 46.491 114 47 2 179 292 67 166 1.46e-25 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053673.t1 AT1G22150 69.423 641 125 6 7 582 21 655 0.0 843
MS.gene053673.t1 AT1G22150 69.423 641 125 6 7 582 21 655 0.0 843
MS.gene053673.t1 AT1G22150 69.423 641 125 6 7 582 21 655 0.0 843
MS.gene053673.t1 AT1G78000 68.346 635 130 6 13 582 24 652 0.0 821
MS.gene053673.t1 AT1G78000 68.346 635 130 6 13 582 24 652 0.0 821
MS.gene053673.t1 AT1G78000 68.346 635 130 6 13 582 24 652 0.0 821
MS.gene053673.t1 AT4G08620 62.282 631 167 5 17 582 23 647 0.0 759
MS.gene053673.t1 AT1G78000 68.475 590 115 6 13 537 24 607 0.0 757
MS.gene053673.t1 AT1G22150 68.717 569 107 6 7 510 21 583 0.0 726
MS.gene053673.t1 AT1G78000 68.028 563 109 6 13 510 24 580 0.0 709
MS.gene053673.t1 AT1G78000 73.077 442 74 3 114 510 4 445 0.0 595
MS.gene053673.t1 AT3G51895 46.273 644 272 7 1 576 46 683 0.0 588
MS.gene053673.t1 AT3G51895 46.273 644 272 7 1 576 1 638 0.0 588
MS.gene053673.t1 AT3G15990 45.733 621 267 5 17 573 27 641 0.0 563
MS.gene053673.t1 AT1G78000 65.063 478 96 6 13 425 24 495 0.0 559
MS.gene053673.t1 AT1G23090 45.136 627 273 6 17 578 4 624 0.0 535
MS.gene053673.t1 AT5G10180 46.656 643 264 10 5 575 37 672 0.0 531
MS.gene053673.t1 AT4G02700 43.760 633 284 7 8 575 2 627 7.07e-177 515
MS.gene053673.t1 AT1G77990 46.127 581 240 6 59 572 89 663 2.44e-171 502
MS.gene053673.t1 AT1G23090 49.561 456 208 2 145 578 37 492 1.15e-153 451
MS.gene053673.t1 AT1G23090 49.561 456 208 2 145 578 37 492 1.15e-153 451
MS.gene053673.t1 AT1G23090 49.561 456 208 2 145 578 37 492 1.15e-153 451
MS.gene053673.t1 AT5G19600 38.110 635 309 9 8 575 6 623 3.95e-146 436
MS.gene053673.t1 AT5G13550 32.781 604 317 11 45 575 55 642 4.27e-101 321
MS.gene053673.t1 AT3G12520 31.161 629 341 12 9 575 15 613 4.87e-99 315
MS.gene053673.t1 AT3G12520 31.320 629 340 13 9 575 31 629 8.39e-99 315
MS.gene053673.t1 AT3G12520 30.899 534 280 10 9 482 31 535 1.11e-79 261

Find 142 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATACTCAAAGCTTGCAAATT+TGG 0.134167 5.1:+47762912 MS.gene053673:CDS
TTACCTTTCTTTAACATAAT+TGG 0.142103 5.1:-47765269 None:intergenic
CGCTGCAATAGTCGGATTTA+TGG 0.166264 5.1:+47763525 MS.gene053673:CDS
TCAAACTTTGCAAACTTTCT+TGG 0.182465 5.1:+47766726 MS.gene053673:CDS
CTTTCTTGAGCAGCTTGTTC+TGG 0.237374 5.1:+47766665 MS.gene053673:intron
CCGGGAACCCTTGTGGCTTC+TGG 0.244498 5.1:-47765202 None:intergenic
TACCCTCCAAAAGTTAATTC+TGG 0.255929 5.1:+47762717 MS.gene053673:CDS
CAATTCCCAGAATTAACTTT+TGG 0.286399 5.1:-47762723 None:intergenic
CGACTATTGCAGCGTGTAAT+AGG 0.286627 5.1:-47763516 None:intergenic
AGAAGGGCCAGAAGTTCTTT+TGG 0.294844 5.1:+47763907 MS.gene053673:CDS
GCCATATTCCTTATTATTGC+TGG 0.296925 5.1:+47762748 MS.gene053673:CDS
CCAACTAAGTATAGGGAATA+TGG 0.299920 5.1:-47762683 None:intergenic
AATAGCTCTTCAACAGCTTA+AGG 0.302422 5.1:+47763564 MS.gene053673:CDS
AAGGCCCCGAACTGCTATTC+TGG 0.303809 5.1:+47765135 MS.gene053673:CDS
GGCCGTGGTTTCTCTCTTGT+TGG 0.307403 5.1:+47763119 MS.gene053673:CDS
ACCAGCAATAATAAGGAATA+TGG 0.308116 5.1:-47762749 None:intergenic
ATACACTCCAAATGCAATTC+TGG 0.309038 5.1:+47764825 MS.gene053673:CDS
TACTCAGTTGGATGTGTATT+CGG 0.309165 5.1:-47763168 None:intergenic
GCCGTGGTTTCTCTCTTGTT+GGG 0.313630 5.1:+47763120 MS.gene053673:CDS
CATATTCCCTATACTTAGTT+GGG 0.322705 5.1:+47762684 MS.gene053673:CDS
CTGGAACCCAAAAGAACTTC+TGG 0.328476 5.1:-47763914 None:intergenic
CCTTGTGCGTGTATGGTTCC+TGG 0.330002 5.1:-47762534 None:intergenic
AAAGTCCCGTAAGTTAATTC+TGG 0.338679 5.1:+47762651 MS.gene053673:CDS
GACTTCTAAATAACTCTTCC+AGG 0.340225 5.1:-47766179 None:intergenic
TTGTGGCTTCTGGATATTGC+TGG 0.340906 5.1:-47765192 None:intergenic
TAGTTAAACCAGCAATAATA+AGG 0.352013 5.1:-47762756 None:intergenic
ATGAAAGACTATCAACTTGA+TGG 0.352997 5.1:+47764537 MS.gene053673:CDS
TTCTTCCCCAACTAAGTATA+GGG 0.354633 5.1:-47762690 None:intergenic
CTTCCCCAGAATAGCAGTTC+GGG 0.364574 5.1:-47765140 None:intergenic
CCAGAAGCCACAAGGGTTCC+CGG 0.366444 5.1:+47765202 MS.gene053673:CDS
TCTTCAAAAGAGAGAAGTTC+AGG 0.372341 5.1:+47766200 MS.gene053673:CDS
CTTGCGAAAGGCGTTAGAAT+TGG 0.374842 5.1:+47764363 MS.gene053673:CDS
CAAGGGTCTTCAGCTAGCTT+TGG 0.377885 5.1:-47766798 None:intergenic
GCTGCAATAGTCGGATTTAT+GGG 0.384000 5.1:+47763526 MS.gene053673:CDS
TGCGATTGGGCCAGTGGCCG+TGG 0.387733 5.1:+47763104 MS.gene053673:CDS
ATAGCTCTTCAACAGCTTAA+GGG 0.388577 5.1:+47763565 MS.gene053673:CDS
GGGGCCTTGTGACTTGTAAT+AGG 0.389141 5.1:-47765120 None:intergenic
CAACAGCTTAAGGGTTTCCT+TGG 0.394046 5.1:+47763574 MS.gene053673:CDS
CCATATTCCCTATACTTAGT+TGG 0.401021 5.1:+47762683 MS.gene053673:CDS
ATTGAGGCCAGAATTGCATT+TGG 0.401265 5.1:-47764832 None:intergenic
TCCAAAACAAAACCTCTTCA+AGG 0.403824 5.1:+47762567 MS.gene053673:CDS
TTTCTATAAACAGTTGTCCT+AGG 0.415898 5.1:-47765166 None:intergenic
GATATCAATGGAGCAATTGC+TGG 0.416195 5.1:-47763933 None:intergenic
GTTCTTCCCCAACTAAGTAT+AGG 0.426410 5.1:-47762691 None:intergenic
TCGGTCAGCAATAAATTTCA+TGG 0.428079 5.1:+47764720 MS.gene053673:CDS
CAATTCCCAGAATTAACTTA+CGG 0.430079 5.1:-47762657 None:intergenic
ACTCCAACCTTGTGCGTGTA+TGG 0.432344 5.1:-47762541 None:intergenic
AACAAAGAAATGATGGCATT+AGG 0.432536 5.1:+47764561 MS.gene053673:CDS
AATTCCCAGAATTAACTTAC+GGG 0.433403 5.1:-47762656 None:intergenic
TATCAGGAAGCCATAGCAAT+TGG 0.433820 5.1:+47764498 MS.gene053673:intron
ACCCTCCAAAAGTTAATTCT+GGG 0.438852 5.1:+47762718 MS.gene053673:CDS
AGGCCCCGAACTGCTATTCT+GGG 0.438860 5.1:+47765136 MS.gene053673:CDS
ATGTTTCTCTTACGGTGTAA+TGG 0.443028 5.1:-47762594 None:intergenic
CAGCTTGTTCTGGCAAATCC+TGG 0.448905 5.1:+47766675 MS.gene053673:intron
CGAGAAGAATGTTTCTCTTA+CGG 0.455600 5.1:-47762602 None:intergenic
GTTAGAATTGGCATTGTGGC+TGG 0.459682 5.1:+47764375 MS.gene053673:CDS
CAACAGCCTCTGCAACAGTT+AGG 0.464329 5.1:-47766764 None:intergenic
AAGAGAGAAACCACGGCCAC+TGG 0.464366 5.1:-47763114 None:intergenic
TAAATTTCCTTCACAGAGGA+AGG 0.466479 5.1:-47764324 None:intergenic
TTAGGAGCTATGAATGTTGT+TGG 0.466708 5.1:+47764579 MS.gene053673:CDS
CGTAAGAGAAACATTCTTCT+CGG 0.469662 5.1:+47762603 MS.gene053673:CDS
AAGTCCCGTAAGTTAATTCT+GGG 0.470217 5.1:+47762652 MS.gene053673:CDS
TAGGTAAAACACATAGAGAA+AGG 0.474007 5.1:+47764294 MS.gene053673:intron
TTTGTCTTCTTCACAAGGCC+AGG 0.474993 5.1:+47762516 MS.gene053673:CDS
AAATGTTCTTCCAATTGCTA+TGG 0.475056 5.1:-47764508 None:intergenic
AACAGCTTAAGGGTTTCCTT+GGG 0.476924 5.1:+47763575 MS.gene053673:CDS
AGTTCCCGCGACATTGCGAT+TGG 0.478807 5.1:+47763090 MS.gene053673:intron
ACTTCCTGCTATGTAGCAAC+TGG 0.480021 5.1:+47764609 MS.gene053673:CDS
TCTTCCCCAGAATAGCAGTT+CGG 0.480188 5.1:-47765141 None:intergenic
CCGTGGTTTCTCTCTTGTTG+GGG 0.482794 5.1:+47763121 MS.gene053673:CDS
TATTATCAGGTTCCTTCTCT+CGG 0.490063 5.1:+47764701 MS.gene053673:intron
TGATGGAAACAAAGAAATGA+TGG 0.492078 5.1:+47764554 MS.gene053673:CDS
GACTTTGTCTGATCTTTGAA+AGG 0.507294 5.1:-47762634 None:intergenic
CTATTACACGCTGCAATAGT+CGG 0.507812 5.1:+47763517 MS.gene053673:CDS
TACCAGTGGCATCCATGCCC+TGG 0.511166 5.1:+47766161 MS.gene053673:CDS
ACTCCAATTATGTTAAAGAA+AGG 0.512105 5.1:+47765266 MS.gene053673:CDS
CTATTCTGGGGAAGATCCCT+AGG 0.514412 5.1:+47765149 MS.gene053673:CDS
AAAGAAAGCATACTCCATGA+TGG 0.514535 5.1:-47763660 None:intergenic
CATCAACCTTGTTGACTACA+AGG 0.515925 5.1:+47764870 MS.gene053673:CDS
TAAATAACTCTTCCAGGGCA+TGG 0.517398 5.1:-47766173 None:intergenic
TGTTGTCGATCAGGGAAAGA+AGG 0.517938 5.1:+47763890 MS.gene053673:intron
AACTCTTATAATCAATACAC+CGG 0.520076 5.1:-47765221 None:intergenic
GTTCCCGCGACATTGCGATT+GGG 0.521393 5.1:+47763091 MS.gene053673:intron
ATTTGACTTTGTTGCTTGCA+TGG 0.523266 5.1:+47764921 MS.gene053673:CDS
TTTGACTTTGTTGCTTGCAT+GGG 0.525969 5.1:+47764922 MS.gene053673:CDS
TTCTATAAACAGTTGTCCTA+GGG 0.528944 5.1:-47765165 None:intergenic
TTGTCTATCACTAGTGGACC+AGG 0.533257 5.1:-47766693 None:intergenic
AACACCATGCTTGTCTGCAC+GGG 0.536403 5.1:-47763988 None:intergenic
CAACACCATGCTTGTCTGCA+CGG 0.537870 5.1:-47763989 None:intergenic
AGCAAGTCTTCATACTCAGT+TGG 0.538042 5.1:-47763180 None:intergenic
CTTACCAGTTGCTACATAGC+AGG 0.540351 5.1:-47764613 None:intergenic
ACCGGTGATTACCTTGCGAA+AGG 0.542435 5.1:+47764351 MS.gene053673:CDS
TGGCCCAATCGCAATGTCGC+GGG 0.545124 5.1:-47763094 None:intergenic
CTAATTGCAGGATATTAAGA+TGG 0.551261 5.1:+47765959 MS.gene053673:intron
TCAGCAATAAATTTCATGGC+TGG 0.552240 5.1:+47764724 MS.gene053673:CDS
AGCAATATCCAGAAGCCACA+AGG 0.552472 5.1:+47765194 MS.gene053673:CDS
TTGGTCTGTAAACAGGACAT+TGG 0.557141 5.1:+47762889 MS.gene053673:intron
TGCAAGTCTCTGCATTCCCC+AGG 0.559253 5.1:+47762780 MS.gene053673:CDS
TTTGTCTGATCTTTGAAAGG+AGG 0.561020 5.1:-47762631 None:intergenic
GATAAATCCTTCCTCTGTGA+AGG 0.562675 5.1:+47764317 MS.gene053673:CDS
CAGGATATTAAGATGGCTGA+TGG 0.564002 5.1:+47765966 MS.gene053673:intron
GAACCATACACGCACAAGGT+TGG 0.567049 5.1:+47762538 MS.gene053673:CDS
AGGTAAAACACATAGAGAAA+GGG 0.567158 5.1:+47764295 MS.gene053673:intron
ATTTATTGCTGACCGAGAGA+AGG 0.570417 5.1:-47764713 None:intergenic
CGACATTGCGATTGGGCCAG+TGG 0.572112 5.1:+47763098 MS.gene053673:CDS
TTCCAGGGCATGGATGCCAC+TGG 0.573861 5.1:-47766163 None:intergenic
GTATTCTCATCAGCCCATCA+TGG 0.578077 5.1:+47763646 MS.gene053673:CDS
CTGCAATAGTCGGATTTATG+GGG 0.578121 5.1:+47763527 MS.gene053673:CDS
CAATTCTAACGCCTTTCGCA+AGG 0.578178 5.1:-47764362 None:intergenic
AAGAAAGCATACTCCATGAT+GGG 0.579121 5.1:-47763659 None:intergenic
AGAAGTTTGTCTTCTTCACA+AGG 0.581983 5.1:+47762511 MS.gene053673:CDS
TTGTAATAGGATCTTTGCAA+AGG 0.587197 5.1:-47765107 None:intergenic
GAGAGTACGACAGATATCAA+TGG 0.588423 5.1:-47763945 None:intergenic
TGGAGTTTGTCTATCACTAG+TGG 0.589342 5.1:-47766699 None:intergenic
CTGGCCCAATCGCAATGTCG+CGG 0.590486 5.1:-47763095 None:intergenic
GTTGTCGATCAGGGAAAGAA+GGG 0.590642 5.1:+47763891 MS.gene053673:intron
TGTAATGGAATTCCTTGAAG+AGG 0.591832 5.1:-47762579 None:intergenic
GCCTTTCGCAAGGTAATCAC+CGG 0.593120 5.1:-47764352 None:intergenic
TGCAATAGTCGGATTTATGG+GGG 0.606663 5.1:+47763528 MS.gene053673:CDS
ATATTCCCTATACTTAGTTG+GGG 0.608360 5.1:+47762685 MS.gene053673:CDS
CAATACACCGGGAACCCTTG+TGG 0.612119 5.1:-47765209 None:intergenic
CATGGCTGGCTGCGAAACTG+CGG 0.618353 5.1:+47764738 MS.gene053673:CDS
ACTTCTAAATAACTCTTCCA+GGG 0.621237 5.1:-47766178 None:intergenic
AGGCGTTAGAATTGGCATTG+TGG 0.630919 5.1:+47764371 MS.gene053673:CDS
TTGCTGCCTTGTAGTCAACA+AGG 0.634329 5.1:-47764876 None:intergenic
AGTTTGCAAAGTTTGATGTG+TGG 0.641941 5.1:-47766719 None:intergenic
GTTACTGATATTGATACCAG+TGG 0.647299 5.1:+47766147 MS.gene053673:CDS
GATCTTCCTAACTGTTGCAG+AGG 0.649976 5.1:+47766758 MS.gene053673:CDS
CCAGGAACCATACACGCACA+AGG 0.650752 5.1:+47762534 MS.gene053673:CDS
CCCCAACAAGAGAGAAACCA+CGG 0.650873 5.1:-47763121 None:intergenic
GACAGCACAAATGATGATTG+AGG 0.651653 5.1:-47764848 None:intergenic
GGTTATGTATACAAACAAAG+TGG 0.654086 5.1:-47763967 None:intergenic
GCAATATCCAGAAGCCACAA+GGG 0.661125 5.1:+47765195 MS.gene053673:CDS
TTCCCCAGAATAGCAGTTCG+GGG 0.661856 5.1:-47765139 None:intergenic
ACTCTTATAATCAATACACC+GGG 0.673544 5.1:-47765220 None:intergenic
TTTGGAGTGTATTTGAAAAG+CGG 0.675812 5.1:-47764814 None:intergenic
GGCCCCGAACTGCTATTCTG+GGG 0.677105 5.1:+47765137 MS.gene053673:CDS
AAAATAAATTTCCTTCACAG+AGG 0.679400 5.1:-47764328 None:intergenic
AGATCCTATTACAAGTCACA+AGG 0.684935 5.1:+47765116 MS.gene053673:CDS
ATAACCCGTGCAGACAAGCA+TGG 0.686605 5.1:+47763984 MS.gene053673:CDS
GCAATAGTCGGATTTATGGG+GGG 0.696030 5.1:+47763529 MS.gene053673:CDS
CTGTTGAAGAGCTATTGTGA+TGG 0.722345 5.1:-47763557 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATCAAAACATAAAAA+AGG - chr5.1:47762870-47762889 None:intergenic 10.0%
!! ATATATCAAAACATAAAAAA+GGG - chr5.1:47762869-47762888 None:intergenic 10.0%
!! TTAACATACAAATATATATA+GGG - chr5.1:47766581-47766600 None:intergenic 10.0%
!!! GAATTAATTTAATTTATCTA+TGG - chr5.1:47766541-47766560 None:intergenic 10.0%
!!! TTTTTATGTTTTGATATATT+TGG + chr5.1:47762870-47762889 MS.gene053673:intron 10.0%
!! AAAAAAAATTACAAACAGAA+AGG - chr5.1:47765305-47765324 None:intergenic 15.0%
!! AAAAAAATTACAAACAGAAA+GGG - chr5.1:47765304-47765323 None:intergenic 15.0%
!! ACATAATTAGAAAATAAGAA+AGG - chr5.1:47763866-47763885 None:intergenic 15.0%
!! GTTAACATACAAATATATAT+AGG - chr5.1:47766582-47766601 None:intergenic 15.0%
!! TATATATATCTCAACTAAAA+AGG + chr5.1:47766637-47766656 MS.gene053673:intron 15.0%
!! TATATCAAAACATAAAAAAG+GGG - chr5.1:47762868-47762887 None:intergenic 15.0%
!!! AAATTTAAGATAGACTATAT+TGG - chr5.1:47765571-47765590 None:intergenic 15.0%
!! AATTAATACAATCTGTATAG+TGG + chr5.1:47765340-47765359 MS.gene053673:intron 20.0%
!! ATATTAATAACTATGCTGTA+AGG + chr5.1:47765394-47765413 MS.gene053673:intron 20.0%
!! TATAAGATATTTCGGATTAT+TGG - chr5.1:47765481-47765500 None:intergenic 20.0%
!! TATGTAACATTTCTGATTAA+AGG - chr5.1:47763397-47763416 None:intergenic 20.0%
!! TGGCAAACTATATTATTAAT+TGG + chr5.1:47763773-47763792 MS.gene053673:intron 20.0%
!! TTACCTTTCTTTAACATAAT+TGG - chr5.1:47765272-47765291 None:intergenic 20.0%
!! TTAGAAAATAAGAAAGGTTT+AGG - chr5.1:47763860-47763879 None:intergenic 20.0%
!! TTGAATAGTGATTAATAGTT+CGG + chr5.1:47765693-47765712 MS.gene053673:intron 20.0%
!!! AATCTAAAGTAAATTTACCT+GGG - chr5.1:47762800-47762819 None:intergenic 20.0%
!!! ACACTGATTATAAGATATTT+CGG - chr5.1:47765489-47765508 None:intergenic 20.0%
!!! GATAATTTTTCCTTTCTTTT+CGG + chr5.1:47765911-47765930 MS.gene053673:intron 20.0%
! AAAATAAATTTCCTTCACAG+AGG - chr5.1:47764331-47764350 None:intergenic 25.0%
! AACAAAGCTTGAATCTATAA+AGG - chr5.1:47763043-47763062 None:intergenic 25.0%
! AACTCTTATAATCAATACAC+CGG - chr5.1:47765224-47765243 None:intergenic 25.0%
! ACAAAGCTTGAATCTATAAA+GGG - chr5.1:47763042-47763061 None:intergenic 25.0%
! ACAAATTAAACACACATTTG+AGG - chr5.1:47766120-47766139 None:intergenic 25.0%
! ACATCTCAACTATCAAAAAT+TGG - chr5.1:47766032-47766051 None:intergenic 25.0%
! ACTCCAATTATGTTAAAGAA+AGG + chr5.1:47765266-47765285 MS.gene053673:CDS 25.0%
! ACTGATTAATATCTAACATC+TGG + chr5.1:47763753-47763772 MS.gene053673:intron 25.0%
! ATAATGAGAACTCAAGAAAA+CGG - chr5.1:47764460-47764479 None:intergenic 25.0%
! ATTATTAACAGTGTTGTGTT+CGG - chr5.1:47763315-47763334 None:intergenic 25.0%
! TAATAAGATAACTGAGTCTT+TGG - chr5.1:47765007-47765026 None:intergenic 25.0%
! TAGTTAAACCAGCAATAATA+AGG - chr5.1:47762759-47762778 None:intergenic 25.0%
! TGAATAGTGATTAATAGTTC+GGG + chr5.1:47765694-47765713 MS.gene053673:intron 25.0%
! TTAATTATTGCCGAAAAGAA+AGG - chr5.1:47765924-47765943 None:intergenic 25.0%
! TTATTACCATCAGATTTCAT+TGG - chr5.1:47765783-47765802 None:intergenic 25.0%
!! ATCTAAAGTAAATTTACCTG+GGG - chr5.1:47762799-47762818 None:intergenic 25.0%
!! ATGTTTTCTGTGTTTTTCTT+TGG + chr5.1:47762982-47763001 MS.gene053673:intron 25.0%
!! ATTAATTTTGTTGCATGTTG+TGG + chr5.1:47765071-47765090 MS.gene053673:intron 25.0%
!! CAATCTAAAGTAAATTTACC+TGG - chr5.1:47762801-47762820 None:intergenic 25.0%
!!! CATGTTACATTTTGATTATC+AGG + chr5.1:47764482-47764501 MS.gene053673:intron 25.0%
!!! GTGAAGGAAATTTATTTTAC+CGG + chr5.1:47764333-47764352 MS.gene053673:CDS 25.0%
!!! TTTCAGTTTTAGTTTCTGAT+TGG + chr5.1:47765040-47765059 MS.gene053673:intron 25.0%
AAACAGAAGAAAAGCAAGAA+AGG - chr5.1:47763804-47763823 None:intergenic 30.0%
AAACATTAACCTAACGAGTT+TGG + chr5.1:47765718-47765737 MS.gene053673:intron 30.0%
AAATGTTCTTCCAATTGCTA+TGG - chr5.1:47764511-47764530 None:intergenic 30.0%
AACAAAGAAATGATGGCATT+AGG + chr5.1:47764561-47764580 MS.gene053673:CDS 30.0%
AATCAAAACATGCATGAAGA+TGG - chr5.1:47766367-47766386 None:intergenic 30.0%
AATCTGATGGTAATAAGTGA+AGG + chr5.1:47765787-47765806 MS.gene053673:intron 30.0%
AATTCCCAGAATTAACTTAC+GGG - chr5.1:47762659-47762678 None:intergenic 30.0%
ACCAGCAATAATAAGGAATA+TGG - chr5.1:47762752-47762771 None:intergenic 30.0%
ACTCTTATAATCAATACACC+GGG - chr5.1:47765223-47765242 None:intergenic 30.0%
ACTTCTAAATAACTCTTCCA+GGG - chr5.1:47766181-47766200 None:intergenic 30.0%
AGGTAAAACACATAGAGAAA+GGG + chr5.1:47764295-47764314 MS.gene053673:intron 30.0%
ATACTCAAAGCTTGCAAATT+TGG + chr5.1:47762912-47762931 MS.gene053673:CDS 30.0%
ATATTCCCTATACTTAGTTG+GGG + chr5.1:47762685-47762704 MS.gene053673:CDS 30.0%
ATCAAAACATGCATGAAGAT+GGG - chr5.1:47766366-47766385 None:intergenic 30.0%
ATCAATCAAAAATCCTAACC+TGG - chr5.1:47763494-47763513 None:intergenic 30.0%
ATGAAAGACTATCAACTTGA+TGG + chr5.1:47764537-47764556 MS.gene053673:CDS 30.0%
ATGTTATATGTTGTCGATCA+GGG + chr5.1:47763882-47763901 MS.gene053673:intron 30.0%
CAATTCCCAGAATTAACTTA+CGG - chr5.1:47762660-47762679 None:intergenic 30.0%
CATATTCCCTATACTTAGTT+GGG + chr5.1:47762684-47762703 MS.gene053673:CDS 30.0%
CATCTTAATATCCTGCAATT+AGG - chr5.1:47765961-47765980 None:intergenic 30.0%
CTAATTGCAGGATATTAAGA+TGG + chr5.1:47765959-47765978 MS.gene053673:intron 30.0%
GAATAGTGATTAATAGTTCG+GGG + chr5.1:47765695-47765714 MS.gene053673:intron 30.0%
GATATATTTGGTCTGTAAAC+AGG + chr5.1:47762882-47762901 MS.gene053673:intron 30.0%
GCTAAAAGAAGTTTATGAAC+AGG - chr5.1:47764120-47764139 None:intergenic 30.0%
GGTTATGTATACAAACAAAG+TGG - chr5.1:47763970-47763989 None:intergenic 30.0%
TAGGTAAAACACATAGAGAA+AGG + chr5.1:47764294-47764313 MS.gene053673:intron 30.0%
TATGTTATATGTTGTCGATC+AGG + chr5.1:47763881-47763900 MS.gene053673:intron 30.0%
TCAAAAATTGGATTCGTGTT+TGG - chr5.1:47766020-47766039 None:intergenic 30.0%
TCAAACTTTGCAAACTTTCT+TGG + chr5.1:47766726-47766745 MS.gene053673:CDS 30.0%
TGATGGAAACAAAGAAATGA+TGG + chr5.1:47764554-47764573 MS.gene053673:CDS 30.0%
TTCTATAAACAGTTGTCCTA+GGG - chr5.1:47765168-47765187 None:intergenic 30.0%
TTGTAATAGGATCTTTGCAA+AGG - chr5.1:47765110-47765129 None:intergenic 30.0%
TTTCTATAAACAGTTGTCCT+AGG - chr5.1:47765169-47765188 None:intergenic 30.0%
! CAATTCCCAGAATTAACTTT+TGG - chr5.1:47762726-47762745 None:intergenic 30.0%
! TTTGGAGTGTATTTGAAAAG+CGG - chr5.1:47764817-47764836 None:intergenic 30.0%
! TTTTATCTATTGACGTGTGT+AGG + chr5.1:47764275-47764294 MS.gene053673:intron 30.0%
!! AAGAGTGCTTACAATATACT+TGG - chr5.1:47763828-47763847 None:intergenic 30.0%
!! ACAAGTTAAGTTGAGCATAA+AGG - chr5.1:47766074-47766093 None:intergenic 30.0%
!! TATACTGTCTTGCTATTATC+AGG + chr5.1:47764688-47764707 MS.gene053673:intron 30.0%
!! TCTAGTTCTAGACATGAAAT+AGG + chr5.1:47765635-47765654 MS.gene053673:intron 30.0%
!!! AGGTATGACTCATTGATTTT+AGG + chr5.1:47763226-47763245 MS.gene053673:intron 30.0%
!!! CATTATTGATTTTCGTGTGA+AGG - chr5.1:47763692-47763711 None:intergenic 30.0%
!!! GATTCATGTTTTGGAATATG+CGG + chr5.1:47766292-47766311 MS.gene053673:intron 30.0%
!!! GCATGTATTGATTCATGTTT+TGG + chr5.1:47766283-47766302 MS.gene053673:intron 30.0%
!!! GTGTTTTAAGAGTTTCACAT+TGG + chr5.1:47765657-47765676 MS.gene053673:intron 30.0%
AAAGTCCCGTAAGTTAATTC+TGG + chr5.1:47762651-47762670 MS.gene053673:CDS 35.0%
AAGTCCCGTAAGTTAATTCT+GGG + chr5.1:47762652-47762671 MS.gene053673:CDS 35.0%
AATAGCTCTTCAACAGCTTA+AGG + chr5.1:47763564-47763583 MS.gene053673:CDS 35.0%
ACCCTCCAAAAGTTAATTCT+GGG + chr5.1:47762718-47762737 MS.gene053673:CDS 35.0%
ACGAATCACTAACATAGACA+CGG + chr5.1:47763286-47763305 MS.gene053673:intron 35.0%
AGAAGTTTGTCTTCTTCACA+AGG + chr5.1:47762511-47762530 MS.gene053673:CDS 35.0%
AGATCCTATTACAAGTCACA+AGG + chr5.1:47765116-47765135 MS.gene053673:CDS 35.0%
AGTTTGCAAAGTTTGATGTG+TGG - chr5.1:47766722-47766741 None:intergenic 35.0%
ATACACTCCAAATGCAATTC+TGG + chr5.1:47764825-47764844 MS.gene053673:CDS 35.0%
ATAGCTCTTCAACAGCTTAA+GGG + chr5.1:47763565-47763584 MS.gene053673:CDS 35.0%
ATGCTAACGACATACCAATT+GGG + chr5.1:47763456-47763475 MS.gene053673:intron 35.0%
ATGTCGTTAGCATAAGAGTT+TGG - chr5.1:47763449-47763468 None:intergenic 35.0%
ATGTTTCTCTTACGGTGTAA+TGG - chr5.1:47762597-47762616 None:intergenic 35.0%
CCAACTAAGTATAGGGAATA+TGG - chr5.1:47762686-47762705 None:intergenic 35.0%
CCATATTCCCTATACTTAGT+TGG + chr5.1:47762683-47762702 MS.gene053673:CDS 35.0%
CCATCAGATTTCATTGGAAA+TGG - chr5.1:47765777-47765796 None:intergenic 35.0%
CCATTTCCAATGAAATCTGA+TGG + chr5.1:47765774-47765793 MS.gene053673:intron 35.0%
CGAGAAGAATGTTTCTCTTA+CGG - chr5.1:47762605-47762624 None:intergenic 35.0%
CGTAAGAGAAACATTCTTCT+CGG + chr5.1:47762603-47762622 MS.gene053673:CDS 35.0%
GACTTCTAAATAACTCTTCC+AGG - chr5.1:47766182-47766201 None:intergenic 35.0%
GACTTTGTCTGATCTTTGAA+AGG - chr5.1:47762637-47762656 None:intergenic 35.0%
GCCATATTCCTTATTATTGC+TGG + chr5.1:47762748-47762767 MS.gene053673:CDS 35.0%
GTAAGGACAGAAGTTGTATA+TGG + chr5.1:47765411-47765430 MS.gene053673:intron 35.0%
GTTACTGATATTGATACCAG+TGG + chr5.1:47766147-47766166 MS.gene053673:CDS 35.0%
GTTCAAAGACCAAAAATTGC+AGG + chr5.1:47765834-47765853 MS.gene053673:intron 35.0%
TAAATTTCCTTCACAGAGGA+AGG - chr5.1:47764327-47764346 None:intergenic 35.0%
TACAATCTGTATAGTGGTCT+AGG + chr5.1:47765346-47765365 MS.gene053673:intron 35.0%
TACCCTCCAAAAGTTAATTC+TGG + chr5.1:47762717-47762736 MS.gene053673:CDS 35.0%
TACTCAGTTGGATGTGTATT+CGG - chr5.1:47763171-47763190 None:intergenic 35.0%
TAGATATCCTAACCATCGTT+TGG - chr5.1:47765865-47765884 None:intergenic 35.0%
TATATGGTTCCGAAAATGTC+AGG + chr5.1:47765427-47765446 MS.gene053673:intron 35.0%
TATGCTAACGACATACCAAT+TGG + chr5.1:47763455-47763474 MS.gene053673:intron 35.0%
TATTATCAGGTTCCTTCTCT+CGG + chr5.1:47764701-47764720 MS.gene053673:intron 35.0%
TCAGCAATAAATTTCATGGC+TGG + chr5.1:47764724-47764743 MS.gene053673:CDS 35.0%
TCCAAAACAAAACCTCTTCA+AGG + chr5.1:47762567-47762586 MS.gene053673:CDS 35.0%
TCGGTCAGCAATAAATTTCA+TGG + chr5.1:47764720-47764739 MS.gene053673:CDS 35.0%
TCTTCAAAAGAGAGAAGTTC+AGG + chr5.1:47766200-47766219 MS.gene053673:CDS 35.0%
TGCAATTAGGCATCAGAAAT+AGG - chr5.1:47765948-47765967 None:intergenic 35.0%
TGTGTCTATAAGTGCATGTT+TGG - chr5.1:47766455-47766474 None:intergenic 35.0%
TTAGGAGCTATGAATGTTGT+TGG + chr5.1:47764579-47764598 MS.gene053673:CDS 35.0%
TTCTTCCCCAACTAAGTATA+GGG - chr5.1:47762693-47762712 None:intergenic 35.0%
TTGGATGTTGGATTGAGATT+TGG + chr5.1:47763001-47763020 MS.gene053673:intron 35.0%
! AAAGAAAGCATACTCCATGA+TGG - chr5.1:47763663-47763682 None:intergenic 35.0%
! AAGAAAGCATACTCCATGAT+GGG - chr5.1:47763662-47763681 None:intergenic 35.0%
! ACTGTTTTCATGAGCTATCT+TGG - chr5.1:47764150-47764169 None:intergenic 35.0%
! AGTTTGGTAGCACATGTATA+GGG - chr5.1:47763433-47763452 None:intergenic 35.0%
! ATTTGACTTTGTTGCTTGCA+TGG + chr5.1:47764921-47764940 MS.gene053673:CDS 35.0%
! CATGTCTAGAACTAGACATT+AGG - chr5.1:47765631-47765650 None:intergenic 35.0%
! CTGTGTTTTTCTTTGGATGT+TGG + chr5.1:47762989-47763008 MS.gene053673:intron 35.0%
! GTTTTTGCTTCAGTTGAGAT+AGG + chr5.1:47764961-47764980 MS.gene053673:CDS 35.0%
! TATTTCTGATGCCTAATTGC+AGG + chr5.1:47765947-47765966 MS.gene053673:intron 35.0%
! TCCCAGAATTAACTTTTGGA+GGG - chr5.1:47762722-47762741 None:intergenic 35.0%
! TGTAATGGAATTCCTTGAAG+AGG - chr5.1:47762582-47762601 None:intergenic 35.0%
! TTCCCAGAATTAACTTTTGG+AGG - chr5.1:47762723-47762742 None:intergenic 35.0%
! TTGGTTCATCCTGCAATTTT+TGG - chr5.1:47765846-47765865 None:intergenic 35.0%
! TTGTGAACTTTTGAATCCCA+AGG - chr5.1:47763594-47763613 None:intergenic 35.0%
! TTTGACTTTGTTGCTTGCAT+GGG + chr5.1:47764922-47764941 MS.gene053673:CDS 35.0%
! TTTGTCTGATCTTTGAAAGG+AGG - chr5.1:47762634-47762653 None:intergenic 35.0%
!! ACAAGGCAGCAATTTTGATA+TGG + chr5.1:47764887-47764906 MS.gene053673:CDS 35.0%
!!! CATGTTTTGATTGATACCAG+TGG + chr5.1:47766261-47766280 MS.gene053673:intron 35.0%
!!! TCCTTGAAGAGGTTTTGTTT+TGG - chr5.1:47762571-47762590 None:intergenic 35.0%
!!! TTCATGCATGTTTTGATTCG+CGG + chr5.1:47766369-47766388 MS.gene053673:intron 35.0%
!!! TTGAAGAGGTTTTGTTTTGG+AGG - chr5.1:47762568-47762587 None:intergenic 35.0%
AAACATGCATGAAGATGGGT+TGG - chr5.1:47766362-47766381 None:intergenic 40.0%
AACAGCTTAAGGGTTTCCTT+GGG + chr5.1:47763575-47763594 MS.gene053673:CDS 40.0%
ACCATATGACCAAACTCGTT+AGG - chr5.1:47765730-47765749 None:intergenic 40.0%
ACCTAACGAGTTTGGTCATA+TGG + chr5.1:47765726-47765745 MS.gene053673:intron 40.0%
AGCAAGTCTTCATACTCAGT+TGG - chr5.1:47763183-47763202 None:intergenic 40.0%
ATTGAGGCCAGAATTGCATT+TGG - chr5.1:47764835-47764854 None:intergenic 40.0%
ATTGGGTGGATATTTCAACC+AGG + chr5.1:47763473-47763492 MS.gene053673:intron 40.0%
ATTTATTGCTGACCGAGAGA+AGG - chr5.1:47764716-47764735 None:intergenic 40.0%
CAGGATATTAAGATGGCTGA+TGG + chr5.1:47765966-47765985 MS.gene053673:intron 40.0%
CAGTCATTATCGAGTCATCT+AGG + chr5.1:47765598-47765617 MS.gene053673:intron 40.0%
CATGAATCAATACATGCCAC+TGG - chr5.1:47766280-47766299 None:intergenic 40.0%
CTAGATGACTCGATAATGAC+TGG - chr5.1:47765600-47765619 None:intergenic 40.0%
CTATTACACGCTGCAATAGT+CGG + chr5.1:47763517-47763536 MS.gene053673:CDS 40.0%
CTGCAATAGTCGGATTTATG+GGG + chr5.1:47763527-47763546 MS.gene053673:CDS 40.0%
CTGTTGAAGAGCTATTGTGA+TGG - chr5.1:47763560-47763579 None:intergenic 40.0%
GACAGCACAAATGATGATTG+AGG - chr5.1:47764851-47764870 None:intergenic 40.0%
GATAAATCCTTCCTCTGTGA+AGG + chr5.1:47764317-47764336 MS.gene053673:CDS 40.0%
GATATCAATGGAGCAATTGC+TGG - chr5.1:47763936-47763955 None:intergenic 40.0%
GCTGCAATAGTCGGATTTAT+GGG + chr5.1:47763526-47763545 MS.gene053673:CDS 40.0%
GGTTGAAATATCCACCCAAT+TGG - chr5.1:47763473-47763492 None:intergenic 40.0%
GTCATACACAGTCAATACTG+CGG - chr5.1:47762940-47762959 None:intergenic 40.0%
GTGAACATAGCAGAACATAC+TGG + chr5.1:47764044-47764063 MS.gene053673:intron 40.0%
GTGGATATTTCAACCAGGTT+AGG + chr5.1:47763478-47763497 MS.gene053673:intron 40.0%
GTTCTTCCCCAACTAAGTAT+AGG - chr5.1:47762694-47762713 None:intergenic 40.0%
TAAATAACTCTTCCAGGGCA+TGG - chr5.1:47766176-47766195 None:intergenic 40.0%
TATCAGGAAGCCATAGCAAT+TGG + chr5.1:47764498-47764517 MS.gene053673:intron 40.0%
TGAAATGTAACCACCAGTGT+CGG + chr5.1:47763353-47763372 MS.gene053673:intron 40.0%
TGAGTTTGGCAGAATCTTAG+TGG + chr5.1:47766392-47766411 MS.gene053673:intron 40.0%
TGCAATAGTCGGATTTATGG+GGG + chr5.1:47763528-47763547 MS.gene053673:CDS 40.0%
TGGAGTTTGTCTATCACTAG+TGG - chr5.1:47766702-47766721 None:intergenic 40.0%
TTGGTCTGTAAACAGGACAT+TGG + chr5.1:47762889-47762908 MS.gene053673:intron 40.0%
! ATTTTGTTGCATGTTGTGGC+AGG + chr5.1:47765075-47765094 MS.gene053673:intron 40.0%
! CATCAACCTTGTTGACTACA+AGG + chr5.1:47764870-47764889 MS.gene053673:CDS 40.0%
! CTAGTGACTCCTGACATTTT+CGG - chr5.1:47765439-47765458 None:intergenic 40.0%
! GAGAGTACGACAGATATCAA+TGG - chr5.1:47763948-47763967 None:intergenic 40.0%
! GAGTTTGGTAGCACATGTAT+AGG - chr5.1:47763434-47763453 None:intergenic 40.0%
! TGCATGTTTGGAATCACTGT+GGG - chr5.1:47766443-47766462 None:intergenic 40.0%
! TTTCTGATTAAAGGCGCATC+AGG - chr5.1:47763388-47763407 None:intergenic 40.0%
! TTTGGAATATGCGGTGAGTT+TGG + chr5.1:47766301-47766320 MS.gene053673:intron 40.0%
ACTTCCTGCTATGTAGCAAC+TGG + chr5.1:47764609-47764628 MS.gene053673:CDS 45.0%
AGCAATATCCAGAAGCCACA+AGG + chr5.1:47765194-47765213 MS.gene053673:CDS 45.0%
AGGCGTTAGAATTGGCATTG+TGG + chr5.1:47764371-47764390 MS.gene053673:CDS 45.0%
ATGACGGCATAAATCAGTGG+TGG - chr5.1:47763066-47763085 None:intergenic 45.0%
ATGCGACGTGAATAGTGGTT+AGG + chr5.1:47765532-47765551 MS.gene053673:intron 45.0%
CAACAGCTTAAGGGTTTCCT+TGG + chr5.1:47763574-47763593 MS.gene053673:CDS 45.0%
CAATTCTAACGCCTTTCGCA+AGG - chr5.1:47764365-47764384 None:intergenic 45.0%
CACATGACGGCATAAATCAG+TGG - chr5.1:47763069-47763088 None:intergenic 45.0%
CATACCTAAAAACGCCAACG+TGG - chr5.1:47763213-47763232 None:intergenic 45.0%
CGACTATTGCAGCGTGTAAT+AGG - chr5.1:47763519-47763538 None:intergenic 45.0%
CGCTGCAATAGTCGGATTTA+TGG + chr5.1:47763525-47763544 MS.gene053673:CDS 45.0%
CTAACGACATACCAATTGGG+TGG + chr5.1:47763459-47763478 MS.gene053673:intron 45.0%
CTGGAACCCAAAAGAACTTC+TGG - chr5.1:47763917-47763936 None:intergenic 45.0%
CTTACCAGTTGCTACATAGC+AGG - chr5.1:47764616-47764635 None:intergenic 45.0%
GAACAAGCTGCTCAAGAAAG+AGG - chr5.1:47766665-47766684 None:intergenic 45.0%
GATCTTCCTAACTGTTGCAG+AGG + chr5.1:47766758-47766777 MS.gene053673:CDS 45.0%
GCAATAGTCGGATTTATGGG+GGG + chr5.1:47763529-47763548 MS.gene053673:CDS 45.0%
GCAATATCCAGAAGCCACAA+GGG + chr5.1:47765195-47765214 MS.gene053673:CDS 45.0%
GCTATGTTCACGATGAGAGA+AGG - chr5.1:47764035-47764054 None:intergenic 45.0%
GGAGTCACTAGTTATGCATG+AGG + chr5.1:47765448-47765467 MS.gene053673:intron 45.0%
GGATGAACCAAACGATGGTT+AGG + chr5.1:47765855-47765874 MS.gene053673:intron 45.0%
GTATTCTCATCAGCCCATCA+TGG + chr5.1:47763646-47763665 MS.gene053673:CDS 45.0%
GTTAGAATTGGCATTGTGGC+TGG + chr5.1:47764375-47764394 MS.gene053673:CDS 45.0%
GTTGTCGATCAGGGAAAGAA+GGG + chr5.1:47763891-47763910 MS.gene053673:intron 45.0%
TCGCATCACTGTCTAATGTG+AGG - chr5.1:47765518-47765537 None:intergenic 45.0%
TCTTCCCCAGAATAGCAGTT+CGG - chr5.1:47765144-47765163 None:intergenic 45.0%
TGAGTTTGGCAGAATCACAG+TGG + chr5.1:47766315-47766334 MS.gene053673:intron 45.0%
TGTTGTCGATCAGGGAAAGA+AGG + chr5.1:47763890-47763909 MS.gene053673:intron 45.0%
TTGCAGGATGAACCAAACGA+TGG + chr5.1:47765850-47765869 MS.gene053673:intron 45.0%
TTGCTGCCTTGTAGTCAACA+AGG - chr5.1:47764879-47764898 None:intergenic 45.0%
TTGGCAGAATCTTAGTGGCT+TGG + chr5.1:47766397-47766416 MS.gene053673:intron 45.0%
TTGTGGCTTCTGGATATTGC+TGG - chr5.1:47765195-47765214 None:intergenic 45.0%
TTTGTCTTCTTCACAAGGCC+AGG + chr5.1:47762516-47762535 MS.gene053673:CDS 45.0%
! AATCTTAGTGGCTTGGCTCA+CGG + chr5.1:47766404-47766423 MS.gene053673:intron 45.0%
! AGAAGGGCCAGAAGTTCTTT+TGG + chr5.1:47763907-47763926 MS.gene053673:CDS 45.0%
! CTTTCTTGAGCAGCTTGTTC+TGG + chr5.1:47766665-47766684 MS.gene053673:intron 45.0%
! GAAGGGCCAGAAGTTCTTTT+GGG + chr5.1:47763908-47763927 MS.gene053673:CDS 45.0%
! GTGCATGTTTGGAATCACTG+TGG - chr5.1:47766444-47766463 None:intergenic 45.0%
! TGTTTGGAATCACTGTGGGT+TGG - chr5.1:47766439-47766458 None:intergenic 45.0%
! TTGTCTATCACTAGTGGACC+AGG - chr5.1:47766696-47766715 None:intergenic 45.0%
!! ACTTGCTTTTACTGCCACGT+TGG + chr5.1:47763196-47763215 MS.gene053673:intron 45.0%
!! CTTGCGAAAGGCGTTAGAAT+TGG + chr5.1:47764363-47764382 MS.gene053673:CDS 45.0%
!!! CTTGCATGGGAGCATTTTTC+GGG + chr5.1:47764935-47764954 MS.gene053673:CDS 45.0%
!!! GCTTGCATGGGAGCATTTTT+CGG + chr5.1:47764934-47764953 MS.gene053673:CDS 45.0%
!!! GTTTTGATTCGCGGTGAGTT+TGG + chr5.1:47766378-47766397 MS.gene053673:intron 45.0%
!!! TTGCATGGGAGCATTTTTCG+GGG + chr5.1:47764936-47764955 MS.gene053673:CDS 45.0%
AACACCATGCTTGTCTGCAC+GGG - chr5.1:47763991-47764010 None:intergenic 50.0%
ACCGGTGATTACCTTGCGAA+AGG + chr5.1:47764351-47764370 MS.gene053673:CDS 50.0%
ACTCCAACCTTGTGCGTGTA+TGG - chr5.1:47762544-47762563 None:intergenic 50.0%
ATAACCCGTGCAGACAAGCA+TGG + chr5.1:47763984-47764003 MS.gene053673:CDS 50.0%
CAACACCATGCTTGTCTGCA+CGG - chr5.1:47763992-47764011 None:intergenic 50.0%
CAACAGCCTCTGCAACAGTT+AGG - chr5.1:47766767-47766786 None:intergenic 50.0%
CAGTGATGCGACGTGAATAG+TGG + chr5.1:47765527-47765546 MS.gene053673:intron 50.0%
CCCCAACAAGAGAGAAACCA+CGG - chr5.1:47763124-47763143 None:intergenic 50.0%
CCGTGGTTTCTCTCTTGTTG+GGG + chr5.1:47763121-47763140 MS.gene053673:CDS 50.0%
CTTCCCCAGAATAGCAGTTC+GGG - chr5.1:47765143-47765162 None:intergenic 50.0%
GAACCATACACGCACAAGGT+TGG + chr5.1:47762538-47762557 MS.gene053673:CDS 50.0%
GCCGTGGTTTCTCTCTTGTT+GGG + chr5.1:47763120-47763139 MS.gene053673:CDS 50.0%
GCCTTTCGCAAGGTAATCAC+CGG - chr5.1:47764355-47764374 None:intergenic 50.0%
TTCCCCAGAATAGCAGTTCG+GGG - chr5.1:47765142-47765161 None:intergenic 50.0%
TTGGCAGAATCACAGTGGCT+TGG + chr5.1:47766320-47766339 MS.gene053673:intron 50.0%
! ACTGCCACGTTGGCGTTTTT+AGG + chr5.1:47763206-47763225 MS.gene053673:intron 50.0%
! CAAGGGTCTTCAGCTAGCTT+TGG - chr5.1:47766801-47766820 None:intergenic 50.0%
! CAGCTTGTTCTGGCAAATCC+TGG + chr5.1:47766675-47766694 MS.gene053673:intron 50.0%
! CTATTCTGGGGAAGATCCCT+AGG + chr5.1:47765149-47765168 MS.gene053673:CDS 50.0%
! GGGGCCTTGTGACTTGTAAT+AGG - chr5.1:47765123-47765142 None:intergenic 50.0%
!! TAACCACCAGTGTCGGTGTT+AGG + chr5.1:47763360-47763379 MS.gene053673:intron 50.0%
AAGAGAGAAACCACGGCCAC+TGG - chr5.1:47763117-47763136 None:intergenic 55.0%
AAGGCCCCGAACTGCTATTC+TGG + chr5.1:47765135-47765154 MS.gene053673:CDS 55.0%
AGGCCCCGAACTGCTATTCT+GGG + chr5.1:47765136-47765155 MS.gene053673:CDS 55.0%
AGTTCCCGCGACATTGCGAT+TGG + chr5.1:47763090-47763109 MS.gene053673:intron 55.0%
CAATACACCGGGAACCCTTG+TGG - chr5.1:47765212-47765231 None:intergenic 55.0%
CCAGGAACCATACACGCACA+AGG + chr5.1:47762534-47762553 MS.gene053673:CDS 55.0%
CCTTGTGCGTGTATGGTTCC+TGG - chr5.1:47762537-47762556 None:intergenic 55.0%
GGCCGTGGTTTCTCTCTTGT+TGG + chr5.1:47763119-47763138 MS.gene053673:CDS 55.0%
GGGTTGGACGAAATCGCGAT+GGG - chr5.1:47766346-47766365 None:intergenic 55.0%
GTCGCGGGAACTACACATGA+CGG - chr5.1:47763082-47763101 None:intergenic 55.0%
GTTCCCGCGACATTGCGATT+GGG + chr5.1:47763091-47763110 MS.gene053673:intron 55.0%
TGCAAGTCTCTGCATTCCCC+AGG + chr5.1:47762780-47762799 MS.gene053673:CDS 55.0%
! TGGGTTGGACGAAATCGCGA+TGG - chr5.1:47766347-47766366 None:intergenic 55.0%
CAGGTGCCTAACACCGACAC+TGG - chr5.1:47763369-47763388 None:intergenic 60.0%
CCAGAAGCCACAAGGGTTCC+CGG + chr5.1:47765202-47765221 MS.gene053673:CDS 60.0%
CGACATTGCGATTGGGCCAG+TGG + chr5.1:47763098-47763117 MS.gene053673:CDS 60.0%
CTGGCCCAATCGCAATGTCG+CGG - chr5.1:47763098-47763117 None:intergenic 60.0%
GGCCCCGAACTGCTATTCTG+GGG + chr5.1:47765137-47765156 MS.gene053673:CDS 60.0%
GTGCCTAACACCGACACTGG+TGG - chr5.1:47763366-47763385 None:intergenic 60.0%
TACCAGTGGCATCCATGCCC+TGG + chr5.1:47766161-47766180 MS.gene053673:CDS 60.0%
TGGCCCAATCGCAATGTCGC+GGG - chr5.1:47763097-47763116 None:intergenic 60.0%
TTCCAGGGCATGGATGCCAC+TGG - chr5.1:47766166-47766185 None:intergenic 60.0%
! CATGGCTGGCTGCGAAACTG+CGG + chr5.1:47764738-47764757 MS.gene053673:CDS 60.0%
CCGGGAACCCTTGTGGCTTC+TGG - chr5.1:47765205-47765224 None:intergenic 65.0%
TGCGATTGGGCCAGTGGCCG+TGG + chr5.1:47763104-47763123 MS.gene053673:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 47762502 47766821 47762502 ID=MS.gene053673
chr5.1 mRNA 47762502 47766821 47762502 ID=MS.gene053673.t1;Parent=MS.gene053673
chr5.1 exon 47762502 47762801 47762502 ID=MS.gene053673.t1.exon1;Parent=MS.gene053673.t1
chr5.1 CDS 47762502 47762801 47762502 ID=cds.MS.gene053673.t1;Parent=MS.gene053673.t1
chr5.1 exon 47762904 47762941 47762904 ID=MS.gene053673.t1.exon2;Parent=MS.gene053673.t1
chr5.1 CDS 47762904 47762941 47762904 ID=cds.MS.gene053673.t1;Parent=MS.gene053673.t1
chr5.1 exon 47763092 47763187 47763092 ID=MS.gene053673.t1.exon3;Parent=MS.gene053673.t1
chr5.1 CDS 47763092 47763187 47763092 ID=cds.MS.gene053673.t1;Parent=MS.gene053673.t1
chr5.1 exon 47763495 47763669 47763495 ID=MS.gene053673.t1.exon4;Parent=MS.gene053673.t1
chr5.1 CDS 47763495 47763669 47763495 ID=cds.MS.gene053673.t1;Parent=MS.gene053673.t1
chr5.1 exon 47763903 47764016 47763903 ID=MS.gene053673.t1.exon5;Parent=MS.gene053673.t1
chr5.1 CDS 47763903 47764016 47763903 ID=cds.MS.gene053673.t1;Parent=MS.gene053673.t1
chr5.1 exon 47764297 47764413 47764297 ID=MS.gene053673.t1.exon6;Parent=MS.gene053673.t1
chr5.1 CDS 47764297 47764413 47764297 ID=cds.MS.gene053673.t1;Parent=MS.gene053673.t1
chr5.1 exon 47764504 47764630 47764504 ID=MS.gene053673.t1.exon7;Parent=MS.gene053673.t1
chr5.1 CDS 47764504 47764630 47764504 ID=cds.MS.gene053673.t1;Parent=MS.gene053673.t1
chr5.1 exon 47764710 47764996 47764710 ID=MS.gene053673.t1.exon8;Parent=MS.gene053673.t1
chr5.1 CDS 47764710 47764996 47764710 ID=cds.MS.gene053673.t1;Parent=MS.gene053673.t1
chr5.1 exon 47765097 47765287 47765097 ID=MS.gene053673.t1.exon9;Parent=MS.gene053673.t1
chr5.1 CDS 47765097 47765287 47765097 ID=cds.MS.gene053673.t1;Parent=MS.gene053673.t1
chr5.1 exon 47765969 47766054 47765969 ID=MS.gene053673.t1.exon10;Parent=MS.gene053673.t1
chr5.1 CDS 47765969 47766054 47765969 ID=cds.MS.gene053673.t1;Parent=MS.gene053673.t1
chr5.1 exon 47766145 47766221 47766145 ID=MS.gene053673.t1.exon11;Parent=MS.gene053673.t1
chr5.1 CDS 47766145 47766221 47766145 ID=cds.MS.gene053673.t1;Parent=MS.gene053673.t1
chr5.1 exon 47766678 47766821 47766678 ID=MS.gene053673.t1.exon12;Parent=MS.gene053673.t1
chr5.1 CDS 47766678 47766821 47766678 ID=cds.MS.gene053673.t1;Parent=MS.gene053673.t1
Gene Sequence

>MS.gene053673

ATGGATAGCAGAAGTTTGTCTTCTTCACAAGGCCAGGAACCATACACGCACAAGGTTGGAGTTCCTCCAAAACAAAACCTCTTCAAGGAATTCCATTACACCGTAAGAGAAACATTCTTCTCGGACGATCCTCCTTTCAAAGATCAGACAAAGTCCCGTAAGTTAATTCTGGGAATTGAAGCCATATTCCCTATACTTAGTTGGGGAAGAACGTATACCCTCCAAAAGTTAATTCTGGGAATTGAAGCCATATTCCTTATTATTGCTGGTTTAACTATTGCAAGTCTCTGCATTCCCCAGGTAAATTTACTTTAGATTGTTTATTCTTTTAAAAATAAATTTGTATTTTTAATTGATTGCTTTCCCCTTTTTTATGTTTTGATATATTTGGTCTGTAAACAGGACATTGGATACTCAAAGCTTGCAAATTTGGCTCCGCAGTATTGACTGTGTATGACTCTTGTTTCTCATAACAAGCTCATGTTTTCTGTGTTTTTCTTTGGATGTTGGATTGAGATTTGGTTGTGTTTTGTTTTACCCTTTATAGATTCAAGCTTTGTTCCACCACTGATTTATGCCGTCATGTGTAGTTCCCGCGACATTGCGATTGGGCCAGTGGCCGTGGTTTCTCTCTTGTTGGGGACTTTACTACAGAATGAGATTGATCCGAATACACATCCAACTGAGTATGAAGACTTGCTTTTACTGCCACGTTGGCGTTTTTAGGTATGACTCATTGATTTTAGGCGAGTTTATTTTTTAATTTTTCTAGCAATATTGTTCTACGAATCACTAACATAGACACGGACACCGAACACAACACTGTTAATAATTTGATAAAATGAAAGTGATGAAATGTAACCACCAGTGTCGGTGTTAGGCACCTGATGCGCCTTTAATCAGAAATGTTACATAGCTAGTGTTAATGCCCTATACATGTGCTACCAAACTCTTATGCTAACGACATACCAATTGGGTGGATATTTCAACCAGGTTAGGATTTTTGATTGATTTCCTATTACACGCTGCAATAGTCGGATTTATGGGGGGAGCTGCCATCACAATAGCTCTTCAACAGCTTAAGGGTTTCCTTGGGATTCAAAAGTTCACAAAGAAAACTGATATAATATCTGTGATGAATTCAGTATTCTCATCAGCCCATCATGGAGTATGCTTTCTTTTCTATACCTTCACACGAAAATCAATAATGAGATTCTAAGATATATGTATGTGTGTGTTGCAAATACTAAAACTGATTAATATCTAACATCTGGCAAACTATATTATTAATTGGATCTACCTTTCTTGCTTTTCTTCTGTTTGCCAAGTATATTGTAAGCACTCTTATTCATTTTCCTAAACCTTTCTTATTTTCTAATTATGTTATATGTTGTCGATCAGGGAAAGAAGGGCCAGAAGTTCTTTTGGGTTCCAGCAATTGCTCCATTGATATCTGTCGTACTCTCCACTTTGTTTGTATACATAACCCGTGCAGACAAGCATGGTGTTGCGATTGTAAGTATATATAATCCTTCTCTCATCGTGAACATAGCAGAACATACTGGCATAAACACTTGTGAGACTGTTTGAGAGAGCTTATGAAAACAATTTATGTCCTGTTCATAAACTTCTTTTAGCTTGTGTTCCAAGATAGCTCATGAAAACAGTTTATAACTTTTATGAAAAGAGTTTGAATTTATTTGTCTTTTCTTATAAAACTAGCTCATATGTAATAAACGCTTAATTAAGCTGTTTATCGATAGTAGTGAATGTTTTTATCTATTGACGTGTGTAGGTAAAACACATAGAGAAAGGGATAAATCCTTCCTCTGTGAAGGAAATTTATTTTACCGGTGATTACCTTGCGAAAGGCGTTAGAATTGGCATTGTGGCTGGCATGATAGCTTTGACTGTAAGAAAACTGAGACTATTATCTTCACTCAAAGAGTATTTTACCGTTTTCTTGAGTTCTCATTATAACATGTTACATTTTGATTATCAGGAAGCCATAGCAATTGGAAGAACATTTGCTTCTATGAAAGACTATCAACTTGATGGAAACAAAGAAATGATGGCATTAGGAGCTATGAATGTTGTTGGTTCAATGACTTCCTGCTATGTAGCAACTGGTAAGATTGAGAAATTCGTTTAAGCGTGTTATAAACTAATCGTTTTATATTTGCTGATATACTGTCTTGCTATTATCAGGTTCCTTCTCTCGGTCAGCAATAAATTTCATGGCTGGCTGCGAAACTGCGGTCTCTAATATTGTCATGTCTGTTGTTGTGTTCTTAACTCTGCAATTCATCACACCGCTTTTCAAATACACTCCAAATGCAATTCTGGCCTCAATCATCATTTGTGCTGTCATCAACCTTGTTGACTACAAGGCAGCAATTTTGATATGGAAAATTGATAAATTTGACTTTGTTGCTTGCATGGGAGCATTTTTCGGGGTCGTTTTTGCTTCAGTTGAGATAGGACTTTTGATTGCTGTAAGTACCAAAGACTCAGTTATCTTATTATGCTCTAAAATAATTTCAGTTTTAGTTTCTGATTGGTTACTAGTATTAATTTTGTTGCATGTTGTGGCAGGTTTCTATATCCTTTGCAAAGATCCTATTACAAGTCACAAGGCCCCGAACTGCTATTCTGGGGAAGATCCCTAGGACAACTGTTTATAGAAACATCCAGCAATATCCAGAAGCCACAAGGGTTCCCGGTGTATTGATTATAAGAGTTGATTCTGCAATATATTTTTCTAACTCCAATTATGTTAAAGAAAGGTAATAAATTATTCCCTTTCTGTTTGTAATTTTTTTTGATTGAATTGAAATGAATTAATACAATCTGTATAGTGGTCTAGGAAGCTGTATATCTTTTTTCGCAATCATATTAATAACTATGCTGTAAGGACAGAAGTTGTATATGGTTCCGAAAATGTCAGGAGTCACTAGTTATGCATGAGGATAACATCCAATAATCCGAAATATCTTATAATCAGTGTAGTGAGCCTCACATTAGACAGTGATGCGACGTGAATAGTGGTTAGGTTCAAACACAATTCCAATATAGTCTATCTTAAATTTATTGTGCCAGTCATTATCGAGTCATCTAGGTCACACTCCTAATGTCTAGTTCTAGACATGAAATAGGTGTTTTAAGAGTTTCACATTGGATAGTTGTATAGTTTGAATAGTGATTAATAGTTCGGGGAAACATTAACCTAACGAGTTTGGTCATATGGTTTAATAATAGTTAAAAGATGCATGCCATTTCCAATGAAATCTGATGGTAATAAGTGAAGGTTAGTCTAAAAACGAAAGAAACATGTTCAAAGACCAAAAATTGCAGGATGAACCAAACGATGGTTAGGATATCTAATCGAGTTACACATATATTATAAAATGATAATTTTTCCTTTCTTTTCGGCAATAATTAAACCTATTTCTGATGCCTAATTGCAGGATATTAAGATGGCTGATGGATGAAGAAGAACGAGTGAATAGAGACTACCAAACACGAATCCAATTTTTGATAGTTGAGATGTCACGTGAGTCTCTAACTTTCCTTTATGCTCAACTTAACTTGTCGCATAATTAAGAATATGCTTAACCTCAAATGTGTGTTTAATTTGTTGCAGCTGTTACTGATATTGATACCAGTGGCATCCATGCCCTGGAAGAGTTATTTAGAAGTCTTCAAAAGAGAGAAGTTCAGGTAATAAAAGATAAATAAAGAACATATTTTCATATAATGCATGTTTTGATTGATACCAGTGGCATGTATTGATTCATGTTTTGGAATATGCGGTGAGTTTGGCAGAATCACAGTGGCTTGGCCCATCGCGATTTCGTCCAACCCATCTTCATGCATGTTTTGATTCGCGGTGAGTTTGGCAGAATCTTAGTGGCTTGGCTCACGGTGATTTCGTCCAACCCACAGTGATTCCAAACATGCACTTATAGACACATTAATGTCATAAATTGTTTTCATAAGATCTCGCAAATAGTGTTACAATTGCTTATATCATTTTCCATAGATAAATTAAATTAATTCAATTCAAATTTAAAATGCCCTATATATATTTGTATGTTAACAAATTTCTAAACAATATAATATAATGTGACAATTATATATATATCTCAACTAAAAAGGTACCTCTTTCTTGAGCAGCTTGTTCTGGCAAATCCTGGTCCACTAGTGATAGACAAACTCCACACATCAAACTTTGCAAACTTTCTTGGTGAAGACAAGATCTTCCTAACTGTTGCAGAGGCTGTTGCATACTGTTCTCCAAAGCTAGCTGAAGACCCTTGA
Protein sequence

>MS.gene053673.t1

MDSRSLSSSQGQEPYTHKVGVPPKQNLFKEFHYTVRETFFSDDPPFKDQTKSRKLILGIEAIFPILSWGRTYTLQKLILGIEAIFLIIAGLTIASLCIPQDIGYSKLANLAPHSRDIAIGPVAVVSLLLGTLLQNEIDPNTHPTELGFLIDFLLHAAIVGFMGGAAITIALQQLKGFLGIQKFTKKTDIISVMNSVFSSAHHGGKKGQKFFWVPAIAPLISVVLSTLFVYITRADKHGVAIVKHIEKGINPSSVKEIYFTGDYLAKGVRIGIVAGMIALTEAIAIGRTFASMKDYQLDGNKEMMALGAMNVVGSMTSCYVATGSFSRSAINFMAGCETAVSNIVMSVVVFLTLQFITPLFKYTPNAILASIIICAVINLVDYKAAILIWKIDKFDFVACMGAFFGVVFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEATRVPGVLIIRVDSAIYFSNSNYVKERILRWLMDEEERVNRDYQTRIQFLIVEMSPVTDIDTSGIHALEELFRSLQKREVQLVLANPGPLVIDKLHTSNFANFLGEDKIFLTVAEAVAYCSPKLAEDP