AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36032

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36032.t1 MTR_8g463270 99.135 809 7 0 1 809 1 809 0.0 1665
MS.gene36032.t1 MTR_4g094300 30.590 559 350 13 27 564 21 562 7.58e-63 226
MS.gene36032.t1 MTR_7g451010 26.748 329 218 6 46 372 40 347 6.40e-20 95.1
MS.gene36032.t1 MTR_8g099550 26.627 338 216 6 31 356 9 326 9.88e-19 91.3
MS.gene36032.t1 MTR_8g009510 32.632 190 115 4 46 231 40 220 1.60e-18 90.9
MS.gene36032.t1 MTR_5g009150 32.727 220 116 6 31 231 9 215 5.61e-18 89.0
MS.gene36032.t1 MTR_8g105580 25.698 358 222 9 31 372 12 341 1.48e-17 87.4
MS.gene36032.t1 MTR_8g027675 30.698 215 133 4 27 231 5 213 1.63e-17 87.4
MS.gene36032.t1 MTR_1g032550 25.568 352 231 8 31 372 12 342 1.69e-17 87.4
MS.gene36032.t1 MTR_8g105580 25.698 358 222 9 31 372 12 341 1.99e-17 87.0
MS.gene36032.t1 MTR_4g098920 29.858 211 133 3 31 231 9 214 1.14e-16 84.7
MS.gene36032.t1 MTR_8g087770 29.555 247 155 8 11 253 37 268 6.21e-16 82.4
MS.gene36032.t1 MTR_4g093750 30.288 208 128 4 31 231 20 217 9.14e-15 79.0
MS.gene36032.t1 MTR_4g093750 30.288 208 128 4 31 231 20 217 1.01e-14 78.6
MS.gene36032.t1 MTR_8g087750 28.516 256 160 9 11 257 40 281 4.39e-14 76.6
MS.gene36032.t1 MTR_2g009690 29.187 209 129 4 31 231 29 226 2.79e-13 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36032.t1 AT1G53140 76.005 821 169 8 5 809 9 817 0.0 1247
MS.gene36032.t1 AT3G19720 31.083 563 346 14 25 564 27 570 2.04e-61 221
MS.gene36032.t1 AT3G19720 31.083 563 346 14 25 564 27 570 2.61e-61 221
MS.gene36032.t1 AT3G19720 29.933 598 343 16 25 564 27 606 3.52e-56 207
MS.gene36032.t1 AT1G60530 28.736 261 159 7 1 253 21 262 9.34e-20 91.3
MS.gene36032.t1 AT3G60190 32.796 186 120 2 46 231 40 220 1.00e-19 94.7
MS.gene36032.t1 AT3G61760 27.083 336 217 9 31 356 9 326 8.30e-19 90.9
MS.gene36032.t1 AT3G61760 27.083 336 217 9 31 356 9 326 1.09e-18 91.3
MS.gene36032.t1 AT3G61760 27.083 336 217 9 31 356 9 326 1.40e-18 90.9
MS.gene36032.t1 AT1G14830 26.722 363 227 11 24 372 5 342 2.01e-18 90.5
MS.gene36032.t1 AT2G44590 31.183 186 123 2 46 231 35 215 7.01e-18 88.6
MS.gene36032.t1 AT1G60500 29.918 244 153 6 12 253 38 265 3.60e-17 86.7
MS.gene36032.t1 AT5G42080 30.045 223 140 4 31 243 9 225 7.91e-17 84.3
MS.gene36032.t1 AT5G42080 30.332 211 132 3 31 231 9 214 1.14e-16 84.7
MS.gene36032.t1 AT5G42080 30.332 211 132 3 31 231 9 214 1.26e-16 84.7
MS.gene36032.t1 AT5G42080 30.332 211 132 3 31 231 9 214 1.26e-16 84.7
MS.gene36032.t1 AT4G33650 29.524 210 132 4 31 231 42 244 4.98e-14 76.6
MS.gene36032.t1 AT4G33650 29.524 210 132 4 31 231 42 244 5.37e-14 76.6
MS.gene36032.t1 AT2G14120 30.189 212 129 6 31 231 26 229 1.63e-12 71.6
MS.gene36032.t1 AT2G14120 30.189 212 129 6 31 231 26 229 1.93e-12 71.6
MS.gene36032.t1 AT2G14120 30.189 212 129 6 31 231 26 229 2.01e-12 71.6
MS.gene36032.t1 AT2G14120 30.189 212 129 6 31 231 26 229 2.56e-12 71.2
MS.gene36032.t1 AT2G44590 26.882 186 114 3 46 231 35 198 4.48e-11 67.0
MS.gene36032.t1 AT2G44590 26.882 186 114 3 46 231 35 198 4.53e-11 67.0

Find 221 sgRNAs with CRISPR-Local

Find 377 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCAACGGCAACAATTTC+AGG 0.151688 8.1:-52229425 None:intergenic
GAGGTCACTTGTGAACTTTC+TGG 0.154101 8.1:+52230937 MS.gene36032:CDS
CTCCCCATTTCCAAATAAAA+TGG 0.180476 8.1:-52232827 None:intergenic
CTTGAGACGATTATCAAATT+TGG 0.197072 8.1:-52230211 None:intergenic
GGATGTGGATGGGGTCTTTG+TGG 0.207238 8.1:-52229306 None:intergenic
TGCTTACATTCGGTTCTTAA+AGG 0.218388 8.1:+52232345 MS.gene36032:CDS
AATGCCAGTCTTCGTCTTTA+TGG 0.228816 8.1:+52231298 MS.gene36032:CDS
TTCAAGTCCTATATTGGTTT+TGG 0.261984 8.1:+52230823 MS.gene36032:CDS
ATTCTGGACGCTCTCTTTCT+TGG 0.266153 8.1:-52232757 None:intergenic
TGAACCTCGTTGCCGCTTCC+AGG 0.270752 8.1:+52229571 MS.gene36032:CDS
GAAAAGTTCAAGTCCTATAT+TGG 0.282691 8.1:+52230817 MS.gene36032:CDS
TTTAGGAAGCTTATTTGATT+TGG 0.292118 8.1:+52231662 MS.gene36032:CDS
CTCAAAGTGGCATTGGGATT+TGG 0.294675 8.1:+52231245 MS.gene36032:CDS
CACGTATACGTGCGAAATGC+TGG 0.302416 8.1:-52232891 None:intergenic
TTTGCCATTTCCTGTCATTC+TGG 0.314744 8.1:-52232773 None:intergenic
CTTAGGAGAAACTGCTGTTT+TGG 0.332944 8.1:-52229838 None:intergenic
TGATCAGGAGATGGGGTCTC+AGG 0.345824 8.1:-52232673 None:intergenic
CATCAGGGTGCCTTGATTGA+TGG 0.346683 8.1:+52231169 MS.gene36032:intron
AAAGACGAAGACTGGCATTC+GGG 0.353154 8.1:-52231294 None:intergenic
CAAGCCGCTGCTGTCGCTTT+CGG 0.355151 8.1:+52229386 MS.gene36032:CDS
AAGTAGCAGACCTGTGAGTA+TGG 0.356134 8.1:-52232424 None:intergenic
GATCGCCTTGTTGTGGCTCT+CGG 0.357701 8.1:+52233566 MS.gene36032:CDS
TGGGGTCTTTGTGGGAGTGG+TGG 0.361834 8.1:-52229297 None:intergenic
GGTCTTTGTGGGAGTGGTGG+TGG 0.363072 8.1:-52229294 None:intergenic
CTTGACCGGGTGGATGTGGA+TGG 0.367812 8.1:-52229317 None:intergenic
GTAAGCTTCGAAGCGAGATT+TGG 0.370913 8.1:-52229354 None:intergenic
GTATGGAAGTCCGGTGGTTT+CGG 0.371097 8.1:+52229761 MS.gene36032:CDS
TGTGGCCCTGCCTAAGGATA+GGG 0.377422 8.1:+52230696 MS.gene36032:CDS
GATGTGGATGGGGTCTTTGT+GGG 0.379532 8.1:-52229305 None:intergenic
CAGCCAGGTGATCCTGTATA+TGG 0.379808 8.1:+52232694 MS.gene36032:CDS
ACAGGATCACCTGGCTGATC+AGG 0.382456 8.1:-52232688 None:intergenic
GAGGAAGATTCAGAAGAGTA+TGG 0.382821 8.1:+52229744 MS.gene36032:CDS
AAACCCCGGTGTGTCAATAA+TGG 0.393318 8.1:-52229904 None:intergenic
CACTTGTGAACTTTCTGGAT+TGG 0.394884 8.1:+52230942 MS.gene36032:CDS
GTTGAAGGAACAAGAGTATA+CGG 0.395803 8.1:-52230101 None:intergenic
AATCGGAGTGCTTTCTTGAC+CGG 0.402487 8.1:-52229331 None:intergenic
TTGTGGCCCTGCCTAAGGAT+AGG 0.402756 8.1:+52230695 MS.gene36032:CDS
ATTCCACACTACTTTGTTGA+AGG 0.404178 8.1:-52230116 None:intergenic
TTGACCGGGTGGATGTGGAT+GGG 0.404185 8.1:-52229316 None:intergenic
TTGCCCATGCTGGCCGAGGT+GGG 0.406137 8.1:+52231538 MS.gene36032:CDS
TGAACTCATTCAAGCAAGAA+TGG 0.407252 8.1:-52233703 None:intergenic
TGCCCATGCTGGCCGAGGTG+GGG 0.410115 8.1:+52231539 MS.gene36032:CDS
CCTTGTTGTGGCTCTCGGGT+TGG 0.414030 8.1:+52233571 MS.gene36032:CDS
CTTGATCCCTCCTTACATCA+TGG 0.416125 8.1:-52232555 None:intergenic
TATTCAGCTTTGAGTACAAT+TGG 0.418369 8.1:-52229861 None:intergenic
TGGAATGGTGCTCCTCTTTG+TGG 0.418865 8.1:+52230133 MS.gene36032:CDS
GTGTCAATAATGGTAAGATT+TGG 0.420577 8.1:-52229894 None:intergenic
GCCCATGCTGGCCGAGGTGG+GGG 0.421052 8.1:+52231540 MS.gene36032:CDS
TTTGGAAATGGGGAGAGAAC+AGG 0.425343 8.1:+52232835 MS.gene36032:CDS
GCGTCCAGAATGACAGGAAA+TGG 0.426146 8.1:+52232769 MS.gene36032:CDS
CTTTAAGGTGTGCTTACATT+CGG 0.426339 8.1:+52232335 MS.gene36032:CDS
CGAACGTGTGCTGCTTTACC+TGG 0.428192 8.1:-52232619 None:intergenic
GGGTCTCAGGGATAGTCATC+TGG 0.431491 8.1:-52232660 None:intergenic
TTTCTATGCCCTCCATATAC+AGG 0.431806 8.1:-52232706 None:intergenic
TAGACGGCCAAAACCAATAT+AGG 0.432734 8.1:-52230830 None:intergenic
GGGAGTGGTGGTGGATGACA+TGG 0.438859 8.1:-52229285 None:intergenic
GGTTATCTTCAAAAGTGCTT+CGG 0.440026 8.1:-52229817 None:intergenic
GCTTTGAGTACAATTGGCTT+AGG 0.447637 8.1:-52229855 None:intergenic
TAGAAGCTTACCAAGGAGTC+AGG 0.448083 8.1:-52232960 None:intergenic
TGGCCGTCTAAGGGATTACT+TGG 0.454791 8.1:+52230843 MS.gene36032:CDS
ATCGCCTTGTTGTGGCTCTC+GGG 0.455328 8.1:+52233567 MS.gene36032:CDS
ATGGACATGTTTGTCGCTCC+TGG 0.456326 8.1:+52233623 MS.gene36032:CDS
ATCTCATCAGGCGTGTTCTC+CGG 0.457464 8.1:-52230042 None:intergenic
CCTGAAATTGTTGCCGTTGG+TGG 0.458140 8.1:+52229425 MS.gene36032:CDS
CTTGCCCATGCTGGCCGAGG+TGG 0.459436 8.1:+52231537 MS.gene36032:CDS
TAAAGACGAAGACTGGCATT+CGG 0.460049 8.1:-52231295 None:intergenic
CGTGAAGTTCTTGTTGAAAG+AGG 0.460397 8.1:+52232910 MS.gene36032:CDS
GGATGGGGTCTTTGTGGGAG+TGG 0.462001 8.1:-52229300 None:intergenic
TGAAGCATTTGAAGAATAAG+AGG 0.464570 8.1:-52229533 None:intergenic
AAGAGAGCGTCCAGAATGAC+AGG 0.466864 8.1:+52232763 MS.gene36032:CDS
TGACCGGGTGGATGTGGATG+GGG 0.468953 8.1:-52229315 None:intergenic
TCAAGCAAGGCAAGAGTTGA+TGG 0.470376 8.1:-52230901 None:intergenic
AATATATTGCTTGCCCATGC+TGG 0.470464 8.1:+52231528 MS.gene36032:CDS
GAGCGGTCTCAAAGTGGCAT+TGG 0.471095 8.1:+52231238 MS.gene36032:CDS
TTTCCCCACTGCTCAGGGGA+AGG 0.472652 8.1:-52231202 None:intergenic
AAATGAAGAGGCTGAAACCT+GGG 0.476697 8.1:-52232500 None:intergenic
AGCAGTGCAAGCAGCTTGTT+AGG 0.478959 8.1:+52232377 MS.gene36032:CDS
GGGAGCTCTTTCCATCAGAT+TGG 0.479145 8.1:-52229448 None:intergenic
AGCGGTCTCAAAGTGGCATT+GGG 0.479457 8.1:+52231239 MS.gene36032:CDS
CTTTCTTGACCGGGTGGATG+TGG 0.481008 8.1:-52229321 None:intergenic
ATCTAGTAACTCTGATCAAA+GGG 0.481370 8.1:-52233741 None:intergenic
CGAAAGCGACAGCAGCGGCT+TGG 0.487855 8.1:-52229385 None:intergenic
ACTCTGGATTCCTGACTCCT+TGG 0.488697 8.1:+52232950 MS.gene36032:CDS
GAAATGTTGCCCCTATCCTT+AGG 0.488777 8.1:-52230706 None:intergenic
TGTTGCCCCTATCCTTAGGC+AGG 0.492947 8.1:-52230702 None:intergenic
CACACCGGGGTTTGTTCTCA+AGG 0.496399 8.1:+52229914 MS.gene36032:CDS
TTGAGTGCAAGTGGTTACCT+TGG 0.496456 8.1:+52230652 MS.gene36032:CDS
ATTCTGCTTCCCATGATGTA+AGG 0.500060 8.1:+52232545 MS.gene36032:CDS
TTCAGAAGAGTATGGAAGTC+CGG 0.500297 8.1:+52229752 MS.gene36032:CDS
GCAGATCTCTCATGTGGACT+CGG 0.503415 8.1:+52230747 MS.gene36032:CDS
CAATGTCCGTGAAGTTGAGA+TGG 0.505101 8.1:+52229499 MS.gene36032:CDS
CCAGTCTTCGTCTTTATGGA+GGG 0.505627 8.1:+52231302 MS.gene36032:CDS
TCCCTTCTCGAAGCACTCCT+CGG 0.506447 8.1:+52229467 MS.gene36032:CDS
TTGATCCCTCCTTACATCAT+GGG 0.507874 8.1:-52232554 None:intergenic
AAAATGAAGAGGCTGAAACC+TGG 0.508247 8.1:-52232501 None:intergenic
ATGGAGGGGCTGCATTTGAG+AGG 0.509770 8.1:+52231317 MS.gene36032:CDS
ATCGGAGTGCTTTCTTGACC+GGG 0.510588 8.1:-52229330 None:intergenic
TGTGAACGATGAGAAATTCA+TGG 0.512127 8.1:+52233604 MS.gene36032:CDS
ATCTGCTGCACCATCAATCA+AGG 0.512415 8.1:-52231179 None:intergenic
AGTGGCATTGGGATTTGGCC+TGG 0.512652 8.1:+52231250 MS.gene36032:CDS
ACGTATACGTGCGAAATGCT+GGG 0.513649 8.1:-52232890 None:intergenic
CACCTGGCTGATCAGGAGAT+GGG 0.515425 8.1:-52232681 None:intergenic
ATTTACTGATCGGTGGGAAG+TGG 0.515582 8.1:+52230621 MS.gene36032:CDS
AAATTGATCCCACGTTTAGA+CGG 0.515819 8.1:+52230172 MS.gene36032:CDS
GAAACTTGAAGCGTTTATGC+CGG 0.520142 8.1:-52232467 None:intergenic
TCACCTGGCTGATCAGGAGA+TGG 0.523556 8.1:-52232682 None:intergenic
GCCAGTCTTCGTCTTTATGG+AGG 0.526748 8.1:+52231301 MS.gene36032:CDS
CACCAACGGCAACAATTTCA+GGG 0.530283 8.1:-52229424 None:intergenic
ATCCCTGAAATTGTTGCCGT+TGG 0.530967 8.1:+52229422 MS.gene36032:CDS
GGAAACATGGATGGCTATGT+AGG 0.531101 8.1:+52232301 MS.gene36032:CDS
ACCATGGAAAGAATCTCATC+AGG 0.532315 8.1:-52230054 None:intergenic
CTCTTGCCTTGCTTGAGCAA+AGG 0.532479 8.1:+52230908 MS.gene36032:CDS
TCCATCAGATTGGCCACCAA+CGG 0.533133 8.1:-52229438 None:intergenic
GCCTGATGAGATTCTTTCCA+TGG 0.536247 8.1:+52230053 MS.gene36032:CDS
TCATCTCCGCGATGGTGTCA+AGG 0.537521 8.1:+52230780 MS.gene36032:CDS
TCTTTCCATGGTGAAGACAT+TGG 0.538252 8.1:+52230065 MS.gene36032:CDS
ACGGCAACAATTTCAGGGAT+GGG 0.539046 8.1:-52229419 None:intergenic
AATGACTTTCAACCTTGTGC+CGG 0.540900 8.1:+52232448 MS.gene36032:CDS
CGACAGCAGCGGCTTGGAGA+CGG 0.542851 8.1:-52229379 None:intergenic
ACCTCCAGAAAAGAATGCAC+TGG 0.543318 8.1:+52232585 MS.gene36032:CDS
CCCTCCATAAAGACGAAGAC+TGG 0.543941 8.1:-52231302 None:intergenic
GTAGGCGAAGAAGGGTGAAC+CGG 0.544431 8.1:+52230023 MS.gene36032:intron
CACGTGCTGCTGCTAGATCA+TGG 0.544481 8.1:+52231595 MS.gene36032:CDS
TTCGAAGCGAGATTTGGAAT+CGG 0.545179 8.1:-52229348 None:intergenic
AGATCCTTCCCCTGAGCAGT+GGG 0.546793 8.1:+52231198 MS.gene36032:CDS
AAGTTTCAACAAATTTCCCC+AGG 0.547759 8.1:+52232483 MS.gene36032:CDS
AACGGCAACAATTTCAGGGA+TGG 0.548624 8.1:-52229420 None:intergenic
CTTACCATTATTGACACACC+GGG 0.551065 8.1:+52229900 MS.gene36032:CDS
GATCAGGAGATGGGGTCTCA+GGG 0.554324 8.1:-52232672 None:intergenic
ACCGAGGAGTGCTTCGAGAA+GGG 0.554409 8.1:-52229468 None:intergenic
AACCGAGGAGTGCTTCGAGA+AGG 0.556754 8.1:-52229469 None:intergenic
CCTCCATATACAGGATCACC+TGG 0.558162 8.1:-52232697 None:intergenic
TGTATATGGAGGGCATAGAA+AGG 0.559667 8.1:+52232708 MS.gene36032:CDS
CGGCAACAATTTCAGGGATG+GGG 0.560566 8.1:-52229418 None:intergenic
TGAAAGAATTTACCTGGAAG+CGG 0.562408 8.1:-52229583 None:intergenic
GGAGGGCATAGAAAGGAGCT+TGG 0.564041 8.1:+52232715 MS.gene36032:CDS
AAGGTCGAGTGTTGTCTCCA+AGG 0.564899 8.1:-52230669 None:intergenic
CAGATCCTTCCCCTGAGCAG+TGG 0.565180 8.1:+52231197 MS.gene36032:CDS
ACCCCATCTCCTGATCAGCC+AGG 0.569139 8.1:+52232679 MS.gene36032:CDS
CTTCAGACATTTCTCATCTG+AGG 0.569507 8.1:+52230983 MS.gene36032:CDS
ATGGACTGGTAACTGAATCA+AGG 0.577837 8.1:-52232405 None:intergenic
TTCACATCGGTGATGACACC+AGG 0.578996 8.1:-52231268 None:intergenic
GAGCCACAACAAGGCGATCG+CGG 0.580908 8.1:-52233562 None:intergenic
GTGGCCCTGCCTAAGGATAG+GGG 0.581037 8.1:+52230697 MS.gene36032:CDS
TTTCAAATGAAGAGTTCCGC+AGG 0.581321 8.1:+52230725 MS.gene36032:CDS
TTTGTATCGTAGGCGAAGAA+GGG 0.581656 8.1:+52230015 MS.gene36032:intron
GAGTACCCATCTCAACTTCA+CGG 0.582067 8.1:-52229505 None:intergenic
CAGATGAGAAATGTCTGAAG+TGG 0.582709 8.1:-52230980 None:intergenic
GCCGTTGGTGGCCAATCTGA+TGG 0.582734 8.1:+52229437 MS.gene36032:CDS
GTAGGAATTTACTGATCGGT+GGG 0.584050 8.1:+52230615 MS.gene36032:intron
TGCTTCCCATGATGTAAGGA+GGG 0.587091 8.1:+52232549 MS.gene36032:CDS
CAAATTTGATAATCGTCTCA+AGG 0.587563 8.1:+52230212 MS.gene36032:CDS
CATCTCCGCGATGGTGTCAA+GGG 0.588015 8.1:+52230781 MS.gene36032:CDS
TCTTACCATTATTGACACAC+CGG 0.591780 8.1:+52229899 MS.gene36032:CDS
TGTAGGAATTTACTGATCGG+TGG 0.592128 8.1:+52230614 MS.gene36032:intron
TGGAGGGGCTGCATTTGAGA+GGG 0.593307 8.1:+52231318 MS.gene36032:CDS
GCTTGGAATATGCAATGACA+TGG 0.594337 8.1:+52232732 MS.gene36032:CDS
TGTAGAACATCTATGGCACC+AGG 0.596627 8.1:-52233641 None:intergenic
CTGCTTCCCATGATGTAAGG+AGG 0.596811 8.1:+52232548 MS.gene36032:CDS
GCAACGAGGTTCAAGAGCGG+AGG 0.599376 8.1:-52229561 None:intergenic
ATCGTAGATGCCGAAACCAC+CGG 0.600918 8.1:-52229771 None:intergenic
ACCTGGCTGATCAGGAGATG+GGG 0.601811 8.1:-52232680 None:intergenic
GTTACATCGACATTAAACTC+TGG 0.601946 8.1:+52232934 MS.gene36032:CDS
GAAGCGTTTATGCCGGCACA+AGG 0.602447 8.1:-52232460 None:intergenic
CCAGGTGATCCTGTATATGG+AGG 0.602528 8.1:+52232697 MS.gene36032:CDS
CAGCCGCGATCGCCTTGTTG+TGG 0.604218 8.1:+52233559 MS.gene36032:intron
TTGCTTGCCCATGCTGGCCG+AGG 0.604281 8.1:+52231534 MS.gene36032:CDS
TTCAACAAAGTAGTGTGGAA+TGG 0.605436 8.1:+52230118 MS.gene36032:CDS
CAGTCTTCGTCTTTATGGAG+GGG 0.605567 8.1:+52231303 MS.gene36032:CDS
AATGTCCGTGAAGTTGAGAT+GGG 0.609276 8.1:+52229500 MS.gene36032:CDS
TACATGCTGAATCATGCCTA+CGG 0.610062 8.1:-52231698 None:intergenic
CAACGAGGTTCAAGAGCGGA+GGG 0.610546 8.1:-52229560 None:intergenic
CTCCGCGATGGTGTCAAGGG+AGG 0.611557 8.1:+52230784 MS.gene36032:CDS
GCAGACCTGTGAGTATGGAC+TGG 0.612333 8.1:-52232419 None:intergenic
GATCGCTATTTGAGTGCAAG+TGG 0.616547 8.1:+52230643 MS.gene36032:CDS
CCAACCCGAGAGCCACAACA+AGG 0.618603 8.1:-52233571 None:intergenic
ACTCCAAGTAATCCCTTAGA+CGG 0.618889 8.1:-52230846 None:intergenic
GTTCCTTCAACAAAGTAGTG+TGG 0.620081 8.1:+52230113 MS.gene36032:CDS
AATGATTGTCCGTCTAAACG+TGG 0.620311 8.1:-52230181 None:intergenic
CAGGTGATCCTGTATATGGA+GGG 0.623092 8.1:+52232698 MS.gene36032:CDS
ACTACACCTTTGCTCAAGCA+AGG 0.627943 8.1:-52230914 None:intergenic
AGACGAAGACTGGCATTCGG+GGG 0.630834 8.1:-52231292 None:intergenic
CTCGCCGAAAGCGACAGCAG+CGG 0.637069 8.1:-52229390 None:intergenic
AGTTACCAGTCCATACTCAC+AGG 0.637819 8.1:+52232414 MS.gene36032:CDS
GTTATGCATCATCTCCGCGA+TGG 0.637901 8.1:+52230772 MS.gene36032:CDS
CTTGGAATATGCAATGACAT+GGG 0.638221 8.1:+52232733 MS.gene36032:CDS
TCCAGAAAAGAATGCACTGG+AGG 0.638622 8.1:+52232588 MS.gene36032:CDS
ACATGTAGGAATTTACTGAT+CGG 0.642242 8.1:+52230611 MS.gene36032:intron
GCACTGGAGGAAACAACACC+AGG 0.642547 8.1:+52232601 MS.gene36032:CDS
AATGAAGAGGCTGAAACCTG+GGG 0.643591 8.1:-52232499 None:intergenic
TCACATGCAGTATCAAGAAG+AGG 0.644305 8.1:-52231624 None:intergenic
AATAGAGTCTAACCACAAAG+AGG 0.646234 8.1:-52230145 None:intergenic
AGACCCCATCCACATCCACC+CGG 0.647245 8.1:+52229312 MS.gene36032:CDS
AACAAGAGTATACGGTGTGG+AGG 0.647370 8.1:-52230093 None:intergenic
GAAGCATTTGAAGAATAAGA+GGG 0.647522 8.1:-52229532 None:intergenic
AAGACGAAGACTGGCATTCG+GGG 0.649844 8.1:-52231293 None:intergenic
GTTGCCCCTATCCTTAGGCA+GGG 0.652941 8.1:-52230701 None:intergenic
CCGCAGGCAGATCTCTCATG+TGG 0.657902 8.1:+52230741 MS.gene36032:CDS
GACGAAGACTGGCATTCGGG+GGG 0.660082 8.1:-52231291 None:intergenic
GGAGTGCTTTCTTGACCGGG+TGG 0.664871 8.1:-52229327 None:intergenic
TTGGAATATGCAATGACATG+GGG 0.665817 8.1:+52232734 MS.gene36032:CDS
TTCCTAAAACAAAAGCAAGA+CGG 0.669285 8.1:-52231647 None:intergenic
AGTAGCCAATGTCTTCACCA+TGG 0.677040 8.1:-52230070 None:intergenic
AGAAGAGTATGGAAGTCCGG+TGG 0.677609 8.1:+52229755 MS.gene36032:CDS
GATCTCTCATGTGGACTCGG+AGG 0.678782 8.1:+52230750 MS.gene36032:CDS
AGCTTCTATCAGCAACCATG+TGG 0.680329 8.1:+52231026 MS.gene36032:CDS
GCTTGAGCAAAGGTGTAGTG+AGG 0.681974 8.1:+52230918 MS.gene36032:CDS
TGGCTCTAGAAAGAAACCGT+AGG 0.694098 8.1:+52231682 MS.gene36032:CDS
GTAGAAGAGCGGTCTCAAAG+TGG 0.702768 8.1:+52231232 MS.gene36032:CDS
ATGATTGTCCGTCTAAACGT+GGG 0.703297 8.1:-52230180 None:intergenic
GCATTTGAAGAATAAGAGGG+CGG 0.705612 8.1:-52229529 None:intergenic
AATACCTTGAGAACAAACCC+CGG 0.725703 8.1:-52229918 None:intergenic
GCGGCAACGAGGTTCAAGAG+CGG 0.730968 8.1:-52229564 None:intergenic
AACCTCCCTTGACACCATCG+CGG 0.733484 8.1:-52230786 None:intergenic
GGACATTGAAGCGAAAACCG+AGG 0.735109 8.1:-52229484 None:intergenic
CCACATGAGAGATCTGCCTG+CGG 0.735319 8.1:-52230741 None:intergenic
TTTACCTGGAAGCGGCAACG+AGG 0.743831 8.1:-52229575 None:intergenic
AGGAACAAGAGTATACGGTG+TGG 0.749192 8.1:-52230096 None:intergenic
GATCCTTCCCCTGAGCAGTG+GGG 0.749398 8.1:+52231199 MS.gene36032:CDS
GACTGGTAACTGAATCAAGG+TGG 0.786961 8.1:-52232402 None:intergenic
TTACCATTATTGACACACCG+GGG 0.788837 8.1:+52229901 MS.gene36032:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATAACTTTG+AGG - chr8.1:52233263-52233282 None:intergenic 10.0%
!!! ATACATATTATTGTTTTAAA+GGG + chr8.1:52230551-52230570 MS.gene36032:intron 10.0%
!! AAAATATAGTTAGAATCTAA+AGG - chr8.1:52232123-52232142 None:intergenic 15.0%
!! AAATATAGTTAGAATCTAAA+GGG - chr8.1:52232122-52232141 None:intergenic 15.0%
!! AATTATTGAATATACTTATG+TGG - chr8.1:52233499-52233518 None:intergenic 15.0%
!! AATTGCAATCTTTAATATTA+CGG - chr8.1:52230341-52230360 None:intergenic 15.0%
!! TTTAGTAGTATTTATGTATT+TGG - chr8.1:52233345-52233364 None:intergenic 15.0%
!!! GATACATATTATTGTTTTAA+AGG + chr8.1:52230550-52230569 MS.gene36032:intron 15.0%
!! AAATATTTAATTGCATAGAC+AGG - chr8.1:52232026-52232045 None:intergenic 20.0%
!! ATAAATACTACTAAATATGC+CGG + chr8.1:52233350-52233369 MS.gene36032:intron 20.0%
!! CAAGAAATGAAACAAAATAT+AGG - chr8.1:52232220-52232239 None:intergenic 20.0%
!! CATTTCAAATTGAAATTCAT+TGG + chr8.1:52231478-52231497 MS.gene36032:intron 20.0%
!! GAAAATAAGTGACATAAATA+TGG - chr8.1:52233186-52233205 None:intergenic 20.0%
!! GTATCTATCATTACTTTAAT+AGG + chr8.1:52231500-52231519 MS.gene36032:intron 20.0%
!! GTTGTGTAAAAAAATAATAC+AGG + chr8.1:52229722-52229741 MS.gene36032:intron 20.0%
!!! AGCAAAATTTATTTTGAACT+TGG + chr8.1:52231077-52231096 MS.gene36032:intron 20.0%
!!! ATGACATACAATTTTTAATG+TGG + chr8.1:52233472-52233491 MS.gene36032:intron 20.0%
!!! ATTCCATTTTATTTGGAAAT+GGG + chr8.1:52232824-52232843 MS.gene36032:CDS 20.0%
!!! CAAAATGATTCCATTTTATT+TGG + chr8.1:52232817-52232836 MS.gene36032:CDS 20.0%
!!! GAATTTCAATTTGAAATGAA+AGG - chr8.1:52231476-52231495 None:intergenic 20.0%
!!! TAACTATTTTACTCTACAAA+TGG + chr8.1:52231140-52231159 MS.gene36032:intron 20.0%
!!! TCTGTTAATTCATGTAATTT+TGG + chr8.1:52229683-52229702 MS.gene36032:intron 20.0%
!!! TTAATTTTGAAGTTGTCATT+TGG + chr8.1:52230240-52230259 MS.gene36032:intron 20.0%
! AAAACACAGAAGTTAATTTC+TGG - chr8.1:52232059-52232078 None:intergenic 25.0%
! AACATCATAAATAAGACAGA+AGG - chr8.1:52231751-52231770 None:intergenic 25.0%
! AATGAAGAAACATGAAATAC+CGG - chr8.1:52233372-52233391 None:intergenic 25.0%
! ACATCATAAATAAGACAGAA+GGG - chr8.1:52231750-52231769 None:intergenic 25.0%
! AGATATTAAGAGAAGAAGAA+AGG + chr8.1:52231876-52231895 MS.gene36032:intron 25.0%
! CAATTCAAGAAAAAATGAAG+AGG - chr8.1:52232515-52232534 None:intergenic 25.0%
! CATAGACAGGAAATAAATTA+GGG - chr8.1:52232013-52232032 None:intergenic 25.0%
! GAAATAAATTAGGGTTCAAA+TGG - chr8.1:52232004-52232023 None:intergenic 25.0%
! GGAAATAAAGAGAAAGAAAT+TGG + chr8.1:52231897-52231916 MS.gene36032:intron 25.0%
! GTGTAAAAAAATAATACAGG+AGG + chr8.1:52229725-52229744 MS.gene36032:intron 25.0%
! TTGGTTTATTTCATTTCTTC+TGG + chr8.1:52232089-52232108 MS.gene36032:intron 25.0%
! TTTAGGAAGCTTATTTGATT+TGG + chr8.1:52231662-52231681 MS.gene36032:CDS 25.0%
!! ACATCACTGTTCTAAATAAA+CGG + chr8.1:52230271-52230290 MS.gene36032:intron 25.0%
!! AGAAATTAACTTCTGTGTTT+TGG + chr8.1:52232058-52232077 MS.gene36032:intron 25.0%
!! GAAATTAACTTCTGTGTTTT+GGG + chr8.1:52232059-52232078 MS.gene36032:intron 25.0%
!! GGTATGTATCATTTTATACA+AGG - chr8.1:52230404-52230423 None:intergenic 25.0%
!! TTCATTTTGTAGAACATCTA+TGG - chr8.1:52233651-52233670 None:intergenic 25.0%
!!! GATTCCATTTTATTTGGAAA+TGG + chr8.1:52232823-52232842 MS.gene36032:CDS 25.0%
!!! TGTTTTAAAGGGTTCAATAA+TGG + chr8.1:52230562-52230581 MS.gene36032:intron 25.0%
!!! TTAATTTGTTCGACAAGATA+AGG + chr8.1:52233306-52233325 MS.gene36032:intron 25.0%
!!! TTATTTATTTTCTGCGATCT+TGG + chr8.1:52233000-52233019 MS.gene36032:intron 25.0%
!!! TTCCATTTTATTTGGAAATG+GGG + chr8.1:52232825-52232844 MS.gene36032:CDS 25.0%
AAGCACTATCATTATCATTG+AGG - chr8.1:52233418-52233437 None:intergenic 30.0%
ACATAAATATGGACACAGAA+AGG - chr8.1:52233175-52233194 None:intergenic 30.0%
ACATGTAGGAATTTACTGAT+CGG + chr8.1:52230611-52230630 MS.gene36032:intron 30.0%
AGAGAATGAAAGAATTTACC+TGG - chr8.1:52229592-52229611 None:intergenic 30.0%
AGCACTATCATTATCATTGA+GGG - chr8.1:52233417-52233436 None:intergenic 30.0%
AGTGCTTCACAAATTCTTAT+TGG + chr8.1:52229648-52229667 MS.gene36032:intron 30.0%
CAAAGTTGCAATAACATTCA+CGG - chr8.1:52230373-52230392 None:intergenic 30.0%
CTTGAGACGATTATCAAATT+TGG - chr8.1:52230214-52230233 None:intergenic 30.0%
GAAAAGTTCAAGTCCTATAT+TGG + chr8.1:52230817-52230836 MS.gene36032:CDS 30.0%
GCATAGACAGGAAATAAATT+AGG - chr8.1:52232014-52232033 None:intergenic 30.0%
GTGTCAATAATGGTAAGATT+TGG - chr8.1:52229897-52229916 None:intergenic 30.0%
GTTAGTAATGTGATACATGT+AGG + chr8.1:52230597-52230616 MS.gene36032:intron 30.0%
TCATAAACTCATATGATCTG+AGG + chr8.1:52231430-52231449 MS.gene36032:intron 30.0%
TTCCTAAAACAAAAGCAAGA+CGG - chr8.1:52231650-52231669 None:intergenic 30.0%
TTTAATATTACGGACAATCG+CGG - chr8.1:52230331-52230350 None:intergenic 30.0%
! CAAATTTGATAATCGTCTCA+AGG + chr8.1:52230212-52230231 MS.gene36032:CDS 30.0%
! CATCACTGTTCTAAATAAAC+GGG + chr8.1:52230272-52230291 MS.gene36032:intron 30.0%
! GAAGCATTTGAAGAATAAGA+GGG - chr8.1:52229535-52229554 None:intergenic 30.0%
! TGAAGCATTTGAAGAATAAG+AGG - chr8.1:52229536-52229555 None:intergenic 30.0%
! TGGATTGGATTCAAAAATTG+TGG + chr8.1:52230957-52230976 MS.gene36032:CDS 30.0%
!! ATAAATAACTTTGAGGCTTC+CGG - chr8.1:52233256-52233275 None:intergenic 30.0%
!! ATCTGATTGTTTTGTATCGT+AGG + chr8.1:52230005-52230024 MS.gene36032:intron 30.0%
!! TATTCAGCTTTGAGTACAAT+TGG - chr8.1:52229864-52229883 None:intergenic 30.0%
!! TGTTTGTTTTCCATGAAGAT+GGG + chr8.1:52232269-52232288 MS.gene36032:intron 30.0%
!! TTGTTTGTTTTCCATGAAGA+TGG + chr8.1:52232268-52232287 MS.gene36032:intron 30.0%
!!! AATATTTTTTCCCCAAGTCT+TGG + chr8.1:52231797-52231816 MS.gene36032:intron 30.0%
!!! TTCAAGTCCTATATTGGTTT+TGG + chr8.1:52230823-52230842 MS.gene36032:CDS 30.0%
AAATTGATCCCACGTTTAGA+CGG + chr8.1:52230172-52230191 MS.gene36032:CDS 35.0%
AAATTTCCAGTTCCAGCTTT+AGG + chr8.1:52233051-52233070 MS.gene36032:intron 35.0%
AAGATACTGATAGAGCTGAA+TGG + chr8.1:52232173-52232192 MS.gene36032:intron 35.0%
AAGTTTCAACAAATTTCCCC+AGG + chr8.1:52232483-52232502 MS.gene36032:CDS 35.0%
AATAGAGTCTAACCACAAAG+AGG - chr8.1:52230148-52230167 None:intergenic 35.0%
AATTTCCAGTTCCAGCTTTA+GGG + chr8.1:52233052-52233071 MS.gene36032:intron 35.0%
ACCTTCAGTTGCAATTTAAC+CGG + chr8.1:52233234-52233253 MS.gene36032:intron 35.0%
ACTATCATTATCATTGAGGG+AGG - chr8.1:52233414-52233433 None:intergenic 35.0%
ACTATCGTTATCCAAGACTT+GGG - chr8.1:52231811-52231830 None:intergenic 35.0%
ATAAAAACGGGAAACATGGA+TGG + chr8.1:52232292-52232311 MS.gene36032:CDS 35.0%
ATGAGTTCAAAAACGTTGCT+CGG + chr8.1:52233717-52233736 MS.gene36032:CDS 35.0%
ATGATAAGTGATTCGACTGA+TGG + chr8.1:52229956-52229975 MS.gene36032:intron 35.0%
ATTCCACACTACTTTGTTGA+AGG - chr8.1:52230119-52230138 None:intergenic 35.0%
CAATGGAGTTTGAGAAATGT+AGG + chr8.1:52231845-52231864 MS.gene36032:intron 35.0%
CATGAAGATGGGATAAAAAC+GGG + chr8.1:52232280-52232299 MS.gene36032:intron 35.0%
CCATGAAGATGGGATAAAAA+CGG + chr8.1:52232279-52232298 MS.gene36032:intron 35.0%
CGACTGATGGTATGTTTAAT+TGG + chr8.1:52229969-52229988 MS.gene36032:intron 35.0%
CTCCCCATTTCCAAATAAAA+TGG - chr8.1:52232830-52232849 None:intergenic 35.0%
CTTGGAATATGCAATGACAT+GGG + chr8.1:52232733-52232752 MS.gene36032:CDS 35.0%
GTTACATCGACATTAAACTC+TGG + chr8.1:52232934-52232953 MS.gene36032:CDS 35.0%
TAAATTGCAACTGAAGGTGA+TGG - chr8.1:52233232-52233251 None:intergenic 35.0%
TACAAATGGATGTTCCATCA+GGG + chr8.1:52231154-52231173 MS.gene36032:intron 35.0%
TCAGCTCTATCAGTATCTTA+GGG - chr8.1:52232172-52232191 None:intergenic 35.0%
TCTTACCATTATTGACACAC+CGG + chr8.1:52229899-52229918 MS.gene36032:CDS 35.0%
TGAAAGAATTTACCTGGAAG+CGG - chr8.1:52229586-52229605 None:intergenic 35.0%
TGAACTCATTCAAGCAAGAA+TGG - chr8.1:52233706-52233725 None:intergenic 35.0%
TGCTTACATTCGGTTCTTAA+AGG + chr8.1:52232345-52232364 MS.gene36032:CDS 35.0%
TGTGAACGATGAGAAATTCA+TGG + chr8.1:52233604-52233623 MS.gene36032:CDS 35.0%
TTCAACAAAGTAGTGTGGAA+TGG + chr8.1:52230118-52230137 MS.gene36032:CDS 35.0%
TTCAGCTCTATCAGTATCTT+AGG - chr8.1:52232173-52232192 None:intergenic 35.0%
TTGGAATATGCAATGACATG+GGG + chr8.1:52232734-52232753 MS.gene36032:CDS 35.0%
TTTCTCAAACTCCATTGAGA+CGG - chr8.1:52231842-52231861 None:intergenic 35.0%
TTTGTTCGACAAGATAAGGT+TGG + chr8.1:52233310-52233329 MS.gene36032:intron 35.0%
! CACAGAAGTTAATTTCTGGA+AGG - chr8.1:52232055-52232074 None:intergenic 35.0%
! GTTGAAGGAACAAGAGTATA+CGG - chr8.1:52230104-52230123 None:intergenic 35.0%
!! ATTTTCTCCGGTGTCAATTT+AGG + chr8.1:52230497-52230516 MS.gene36032:intron 35.0%
!! CTTACTTTTCTTCAAGCTAC+TGG + chr8.1:52233449-52233468 MS.gene36032:intron 35.0%
!! CTTTAAGGTGTGCTTACATT+CGG + chr8.1:52232335-52232354 MS.gene36032:CDS 35.0%
!! GGTTATCTTCAAAAGTGCTT+CGG - chr8.1:52229820-52229839 None:intergenic 35.0%
!! GTCTCAAGTTTGATTTTCTC+CGG + chr8.1:52230485-52230504 MS.gene36032:intron 35.0%
!!! TAGGTTTTCATGCTGCTTTA+AGG + chr8.1:52232320-52232339 MS.gene36032:CDS 35.0%
AAAATGAAGAGGCTGAAACC+TGG - chr8.1:52232504-52232523 None:intergenic 40.0%
AAATGAAGAGGCTGAAACCT+GGG - chr8.1:52232503-52232522 None:intergenic 40.0%
AACTATGATTACCCACCACA+TGG - chr8.1:52231044-52231063 None:intergenic 40.0%
AATACCTTGAGAACAAACCC+CGG - chr8.1:52229921-52229940 None:intergenic 40.0%
AATATATTGCTTGCCCATGC+TGG + chr8.1:52231528-52231547 MS.gene36032:CDS 40.0%
AATGACTTTCAACCTTGTGC+CGG + chr8.1:52232448-52232467 MS.gene36032:CDS 40.0%
AATGATTGTCCGTCTAAACG+TGG - chr8.1:52230184-52230203 None:intergenic 40.0%
AATGCCAGTCTTCGTCTTTA+TGG + chr8.1:52231298-52231317 MS.gene36032:CDS 40.0%
AATGTCCGTGAAGTTGAGAT+GGG + chr8.1:52229500-52229519 MS.gene36032:CDS 40.0%
ACCATGGAAAGAATCTCATC+AGG - chr8.1:52230057-52230076 None:intergenic 40.0%
ACTCCAAGTAATCCCTTAGA+CGG - chr8.1:52230849-52230868 None:intergenic 40.0%
AGCACAACAAGGTGGTATTA+TGG - chr8.1:52233531-52233550 None:intergenic 40.0%
ATGATTGTCCGTCTAAACGT+GGG - chr8.1:52230183-52230202 None:intergenic 40.0%
ATTCTGCTTCCCATGATGTA+AGG + chr8.1:52232545-52232564 MS.gene36032:CDS 40.0%
CACAAGATAGAAGCTTACCA+AGG - chr8.1:52232970-52232989 None:intergenic 40.0%
CACTTGTGAACTTTCTGGAT+TGG + chr8.1:52230942-52230961 MS.gene36032:CDS 40.0%
CAGATGAGAAATGTCTGAAG+TGG - chr8.1:52230983-52231002 None:intergenic 40.0%
CGATCTTGGATGCTTAAAAG+TGG + chr8.1:52233014-52233033 MS.gene36032:intron 40.0%
CGTGAAGTTCTTGTTGAAAG+AGG + chr8.1:52232910-52232929 MS.gene36032:CDS 40.0%
CTACAAATGGATGTTCCATC+AGG + chr8.1:52231153-52231172 MS.gene36032:intron 40.0%
CTATCGTTATCCAAGACTTG+GGG - chr8.1:52231810-52231829 None:intergenic 40.0%
CTTACCATTATTGACACACC+GGG + chr8.1:52229900-52229919 MS.gene36032:CDS 40.0%
CTTCAGACATTTCTCATCTG+AGG + chr8.1:52230983-52231002 MS.gene36032:CDS 40.0%
GAAAAACAACGGTAGAAGAG+CGG + chr8.1:52231221-52231240 MS.gene36032:CDS 40.0%
GACTATCGTTATCCAAGACT+TGG - chr8.1:52231812-52231831 None:intergenic 40.0%
GAGGAAGATTCAGAAGAGTA+TGG + chr8.1:52229744-52229763 MS.gene36032:CDS 40.0%
GATACATACCAAACCCACTT+GGG + chr8.1:52230414-52230433 MS.gene36032:intron 40.0%
GCATTTGAAGAATAAGAGGG+CGG - chr8.1:52229532-52229551 None:intergenic 40.0%
GCTTGGAATATGCAATGACA+TGG + chr8.1:52232732-52232751 MS.gene36032:CDS 40.0%
GTAGGAATTTACTGATCGGT+GGG + chr8.1:52230615-52230634 MS.gene36032:intron 40.0%
GTTCCTTCAACAAAGTAGTG+TGG + chr8.1:52230113-52230132 MS.gene36032:CDS 40.0%
TAAAGACGAAGACTGGCATT+CGG - chr8.1:52231298-52231317 None:intergenic 40.0%
TACATGCTGAATCATGCCTA+CGG - chr8.1:52231701-52231720 None:intergenic 40.0%
TAGACGGCCAAAACCAATAT+AGG - chr8.1:52230833-52230852 None:intergenic 40.0%
TAGCACACCTAAATTGACAC+CGG - chr8.1:52230507-52230526 None:intergenic 40.0%
TCACATGCAGTATCAAGAAG+AGG - chr8.1:52231627-52231646 None:intergenic 40.0%
TCACTAATTGTAGCCTCACT+TGG + chr8.1:52230305-52230324 MS.gene36032:intron 40.0%
TCCGGTTAAATTGCAACTGA+AGG - chr8.1:52233238-52233257 None:intergenic 40.0%
TCTTTCCATGGTGAAGACAT+TGG + chr8.1:52230065-52230084 MS.gene36032:CDS 40.0%
TGATACATACCAAACCCACT+TGG + chr8.1:52230413-52230432 MS.gene36032:intron 40.0%
TGGGATAAAAACGGGAAACA+TGG + chr8.1:52232288-52232307 MS.gene36032:CDS 40.0%
TGTAGGAATTTACTGATCGG+TGG + chr8.1:52230614-52230633 MS.gene36032:intron 40.0%
TTACCATTATTGACACACCG+GGG + chr8.1:52229901-52229920 MS.gene36032:CDS 40.0%
TTATCATTGAGGGAGGATTG+AGG - chr8.1:52233407-52233426 None:intergenic 40.0%
TTCTCAAACTCCATTGAGAC+GGG - chr8.1:52231841-52231860 None:intergenic 40.0%
TTGATCCCTCCTTACATCAT+GGG - chr8.1:52232557-52232576 None:intergenic 40.0%
TTGGATGCTTAAAAGTGGCA+AGG + chr8.1:52233019-52233038 MS.gene36032:intron 40.0%
TTTCAAATGAAGAGTTCCGC+AGG + chr8.1:52230725-52230744 MS.gene36032:CDS 40.0%
TTTCTATGCCCTCCATATAC+AGG - chr8.1:52232709-52232728 None:intergenic 40.0%
TTTGTATCGTAGGCGAAGAA+GGG + chr8.1:52230015-52230034 MS.gene36032:intron 40.0%
! ATTTCCAGTTCCAGCTTTAG+GGG + chr8.1:52233053-52233072 MS.gene36032:intron 40.0%
! GAAACTTGAAGCGTTTATGC+CGG - chr8.1:52232470-52232489 None:intergenic 40.0%
! GCTTTGAGTACAATTGGCTT+AGG - chr8.1:52229858-52229877 None:intergenic 40.0%
! TGTATATGGAGGGCATAGAA+AGG + chr8.1:52232708-52232727 MS.gene36032:CDS 40.0%
! TTCAGAAGAGTATGGAAGTC+CGG + chr8.1:52229752-52229771 MS.gene36032:CDS 40.0%
! TTCGAAGCGAGATTTGGAAT+CGG - chr8.1:52229351-52229370 None:intergenic 40.0%
! TTTGCCATTTCCTGTCATTC+TGG - chr8.1:52232776-52232795 None:intergenic 40.0%
! TTTTGTATCGTAGGCGAAGA+AGG + chr8.1:52230014-52230033 MS.gene36032:intron 40.0%
!! ATGGACTGGTAACTGAATCA+AGG - chr8.1:52232408-52232427 None:intergenic 40.0%
!! CCGTTTTTATCCCATCTTCA+TGG - chr8.1:52232282-52232301 None:intergenic 40.0%
!! CTTAGGAGAAACTGCTGTTT+TGG - chr8.1:52229841-52229860 None:intergenic 40.0%
!!! ATATTGGTTTTGGCCGTCTA+AGG + chr8.1:52230833-52230852 MS.gene36032:CDS 40.0%
!!! CAACACTCGACCTTTTTTTG+TGG + chr8.1:52230678-52230697 MS.gene36032:CDS 40.0%
!!! CTGTGTTTTGGGAGTACTAT+TGG + chr8.1:52232070-52232089 MS.gene36032:intron 40.0%
!!! GACCGTCTTGCTTTTGTTTT+AGG + chr8.1:52231645-52231664 MS.gene36032:CDS 40.0%
!!! TATTGGTTTTGGCCGTCTAA+GGG + chr8.1:52230834-52230853 MS.gene36032:CDS 40.0%
AAACCCCGGTGTGTCAATAA+TGG - chr8.1:52229907-52229926 None:intergenic 45.0%
AAAGACGAAGACTGGCATTC+GGG - chr8.1:52231297-52231316 None:intergenic 45.0%
AACGGCAACAATTTCAGGGA+TGG - chr8.1:52229423-52229442 None:intergenic 45.0%
AAGTAGCAGACCTGTGAGTA+TGG - chr8.1:52232427-52232446 None:intergenic 45.0%
AATGAAGAGGCTGAAACCTG+GGG - chr8.1:52232502-52232521 None:intergenic 45.0%
ACCTCCAGAAAAGAATGCAC+TGG + chr8.1:52232585-52232604 MS.gene36032:CDS 45.0%
ACGGCAACAATTTCAGGGAT+GGG - chr8.1:52229422-52229441 None:intergenic 45.0%
ACGTATACGTGCGAAATGCT+GGG - chr8.1:52232893-52232912 None:intergenic 45.0%
ACTACACCTTTGCTCAAGCA+AGG - chr8.1:52230917-52230936 None:intergenic 45.0%
AGCTTCTATCAGCAACCATG+TGG + chr8.1:52231026-52231045 MS.gene36032:CDS 45.0%
AGTAGCCAATGTCTTCACCA+TGG - chr8.1:52230073-52230092 None:intergenic 45.0%
AGTTACCAGTCCATACTCAC+AGG + chr8.1:52232414-52232433 MS.gene36032:CDS 45.0%
ATCCCTGAAATTGTTGCCGT+TGG + chr8.1:52229422-52229441 MS.gene36032:CDS 45.0%
ATCTGCTGCACCATCAATCA+AGG - chr8.1:52231182-52231201 None:intergenic 45.0%
ATTCTGGACGCTCTCTTTCT+TGG - chr8.1:52232760-52232779 None:intergenic 45.0%
ATTTACTGATCGGTGGGAAG+TGG + chr8.1:52230621-52230640 MS.gene36032:CDS 45.0%
CAATGTCCGTGAAGTTGAGA+TGG + chr8.1:52229499-52229518 MS.gene36032:CDS 45.0%
CACAAACAAGCACAACAAGG+TGG - chr8.1:52233539-52233558 None:intergenic 45.0%
CACCAACGGCAACAATTTCA+GGG - chr8.1:52229427-52229446 None:intergenic 45.0%
CAGGTGATCCTGTATATGGA+GGG + chr8.1:52232698-52232717 MS.gene36032:CDS 45.0%
CAGTCTTCGTCTTTATGGAG+GGG + chr8.1:52231303-52231322 MS.gene36032:CDS 45.0%
CCAGTCTTCGTCTTTATGGA+GGG + chr8.1:52231302-52231321 MS.gene36032:CDS 45.0%
CTAACACGTTGACACGATGT+TGG - chr8.1:52229618-52229637 None:intergenic 45.0%
CTGCACAAACAAGCACAACA+AGG - chr8.1:52233542-52233561 None:intergenic 45.0%
CTTGATCCCTCCTTACATCA+TGG - chr8.1:52232558-52232577 None:intergenic 45.0%
GAAATGTTGCCCCTATCCTT+AGG - chr8.1:52230709-52230728 None:intergenic 45.0%
GACTGGTAACTGAATCAAGG+TGG - chr8.1:52232405-52232424 None:intergenic 45.0%
GAGGTCACTTGTGAACTTTC+TGG + chr8.1:52230937-52230956 MS.gene36032:CDS 45.0%
GAGTACCCATCTCAACTTCA+CGG - chr8.1:52229508-52229527 None:intergenic 45.0%
GATCGCTATTTGAGTGCAAG+TGG + chr8.1:52230643-52230662 MS.gene36032:CDS 45.0%
GCCTGATGAGATTCTTTCCA+TGG + chr8.1:52230053-52230072 MS.gene36032:CDS 45.0%
GGAAACATGGATGGCTATGT+AGG + chr8.1:52232301-52232320 MS.gene36032:CDS 45.0%
GTAAGCTTCGAAGCGAGATT+TGG - chr8.1:52229357-52229376 None:intergenic 45.0%
TAGAAGCTTACCAAGGAGTC+AGG - chr8.1:52232963-52232982 None:intergenic 45.0%
TCAAGCAAGGCAAGAGTTGA+TGG - chr8.1:52230904-52230923 None:intergenic 45.0%
TCCAGAAAAGAATGCACTGG+AGG + chr8.1:52232588-52232607 MS.gene36032:CDS 45.0%
TCTATCAGCAACCATGTGGT+GGG + chr8.1:52231030-52231049 MS.gene36032:intron 45.0%
TCTCAAACTCCATTGAGACG+GGG - chr8.1:52231840-52231859 None:intergenic 45.0%
TGAGCAGTGGGGAAAAACAA+CGG + chr8.1:52231210-52231229 MS.gene36032:CDS 45.0%
TGCTTCCCATGATGTAAGGA+GGG + chr8.1:52232549-52232568 MS.gene36032:CDS 45.0%
TGTAGAACATCTATGGCACC+AGG - chr8.1:52233644-52233663 None:intergenic 45.0%
TTAGGCAGGGCCACAAAAAA+AGG - chr8.1:52230691-52230710 None:intergenic 45.0%
TTCTATCAGCAACCATGTGG+TGG + chr8.1:52231029-52231048 MS.gene36032:intron 45.0%
TTGAGTGCAAGTGGTTACCT+TGG + chr8.1:52230652-52230671 MS.gene36032:CDS 45.0%
TTTGGAAATGGGGAGAGAAC+AGG + chr8.1:52232835-52232854 MS.gene36032:CDS 45.0%
! AACAAGAGTATACGGTGTGG+AGG - chr8.1:52230096-52230115 None:intergenic 45.0%
! AATCGGAGTGCTTTCTTGAC+CGG - chr8.1:52229334-52229353 None:intergenic 45.0%
! AGGAACAAGAGTATACGGTG+TGG - chr8.1:52230099-52230118 None:intergenic 45.0%
! ATCACCTTTTCCCTTGAGAC+TGG - chr8.1:52231388-52231407 None:intergenic 45.0%
! CTCAAAGTGGCATTGGGATT+TGG + chr8.1:52231245-52231264 MS.gene36032:CDS 45.0%
! TCACCTTTTCCCTTGAGACT+GGG - chr8.1:52231387-52231406 None:intergenic 45.0%
! TCCAGTGCATTCTTTTCTGG+AGG - chr8.1:52232589-52232608 None:intergenic 45.0%
! TCCTCCAGTGCATTCTTTTC+TGG - chr8.1:52232592-52232611 None:intergenic 45.0%
!! TGGCTCTAGAAAGAAACCGT+AGG + chr8.1:52231682-52231701 MS.gene36032:CDS 45.0%
!! TTGTTTTTCCCCACTGCTCA+GGG - chr8.1:52231210-52231229 None:intergenic 45.0%
!!! TTTTTTTGTGGCCCTGCCTA+AGG + chr8.1:52230690-52230709 MS.gene36032:CDS 45.0%
AAGACGAAGACTGGCATTCG+GGG - chr8.1:52231296-52231315 None:intergenic 50.0%
ACTCTGGATTCCTGACTCCT+TGG + chr8.1:52232950-52232969 MS.gene36032:CDS 50.0%
AGCGGTCTCAAAGTGGCATT+GGG + chr8.1:52231239-52231258 MS.gene36032:CDS 50.0%
AGTCTCATACCCCGTCTCAA+TGG + chr8.1:52231828-52231847 MS.gene36032:intron 50.0%
ATCGTAGATGCCGAAACCAC+CGG - chr8.1:52229774-52229793 None:intergenic 50.0%
ATCTCATCAGGCGTGTTCTC+CGG - chr8.1:52230045-52230064 None:intergenic 50.0%
ATGGACATGTTTGTCGCTCC+TGG + chr8.1:52233623-52233642 MS.gene36032:CDS 50.0%
CAATATAGCGCCCCTAAAGC+TGG - chr8.1:52233066-52233085 None:intergenic 50.0%
CACGTATACGTGCGAAATGC+TGG - chr8.1:52232894-52232913 None:intergenic 50.0%
CAGCCAGGTGATCCTGTATA+TGG + chr8.1:52232694-52232713 MS.gene36032:CDS 50.0%
CATACCAAACCCACTTGGGT+TGG + chr8.1:52230418-52230437 MS.gene36032:intron 50.0%
CCACCAACGGCAACAATTTC+AGG - chr8.1:52229428-52229447 None:intergenic 50.0%
CCAGGTGATCCTGTATATGG+AGG + chr8.1:52232697-52232716 MS.gene36032:CDS 50.0%
CCCTCCATAAAGACGAAGAC+TGG - chr8.1:52231305-52231324 None:intergenic 50.0%
CCTCCATATACAGGATCACC+TGG - chr8.1:52232700-52232719 None:intergenic 50.0%
CCTGAAATTGTTGCCGTTGG+TGG + chr8.1:52229425-52229444 MS.gene36032:CDS 50.0%
CGGCAACAATTTCAGGGATG+GGG - chr8.1:52229421-52229440 None:intergenic 50.0%
CTCTTGCCTTGCTTGAGCAA+AGG + chr8.1:52230908-52230927 MS.gene36032:CDS 50.0%
CTGCTTCCCATGATGTAAGG+AGG + chr8.1:52232548-52232567 MS.gene36032:CDS 50.0%
CTTGGAGTGTGCTCTTCTCA+AGG + chr8.1:52230463-52230482 MS.gene36032:intron 50.0%
GATGTGGATGGGGTCTTTGT+GGG - chr8.1:52229308-52229327 None:intergenic 50.0%
GCAGATCTCTCATGTGGACT+CGG + chr8.1:52230747-52230766 MS.gene36032:CDS 50.0%
GCCAGTCTTCGTCTTTATGG+AGG + chr8.1:52231301-52231320 MS.gene36032:CDS 50.0%
GCGTCCAGAATGACAGGAAA+TGG + chr8.1:52232769-52232788 MS.gene36032:CDS 50.0%
GGACATTGAAGCGAAAACCG+AGG - chr8.1:52229487-52229506 None:intergenic 50.0%
GGGAGCTCTTTCCATCAGAT+TGG - chr8.1:52229451-52229470 None:intergenic 50.0%
GTAGAAGAGCGGTCTCAAAG+TGG + chr8.1:52231232-52231251 MS.gene36032:CDS 50.0%
GTATGGAAGTCCGGTGGTTT+CGG + chr8.1:52229761-52229780 MS.gene36032:CDS 50.0%
GTTATGCATCATCTCCGCGA+TGG + chr8.1:52230772-52230791 MS.gene36032:CDS 50.0%
TGGAATGGTGCTCCTCTTTG+TGG + chr8.1:52230133-52230152 MS.gene36032:CDS 50.0%
TGGCCGTCTAAGGGATTACT+TGG + chr8.1:52230843-52230862 MS.gene36032:CDS 50.0%
TTCACATCGGTGATGACACC+AGG - chr8.1:52231271-52231290 None:intergenic 50.0%
! AAGGTCGAGTGTTGTCTCCA+AGG - chr8.1:52230672-52230691 None:intergenic 50.0%
! ACCTTTTCCCTTGAGACTGG+GGG - chr8.1:52231385-52231404 None:intergenic 50.0%
! AGAAGAGTATGGAAGTCCGG+TGG + chr8.1:52229755-52229774 MS.gene36032:CDS 50.0%
! AGCAGTGCAAGCAGCTTGTT+AGG + chr8.1:52232377-52232396 MS.gene36032:CDS 50.0%
! ATCGGAGTGCTTTCTTGACC+GGG - chr8.1:52229333-52229352 None:intergenic 50.0%
! CACCTTTTCCCTTGAGACTG+GGG - chr8.1:52231386-52231405 None:intergenic 50.0%
! CATCAATCAAGGCACCCTGA+TGG - chr8.1:52231171-52231190 None:intergenic 50.0%
! CATCAGGGTGCCTTGATTGA+TGG + chr8.1:52231169-52231188 MS.gene36032:intron 50.0%
! CTTGAGAAGAGCACACTCCA+AGG - chr8.1:52230465-52230484 None:intergenic 50.0%
! GACAGAAGGGTATGTCAGCA+AGG - chr8.1:52231737-52231756 None:intergenic 50.0%
! GCTTGAGCAAAGGTGTAGTG+AGG + chr8.1:52230918-52230937 MS.gene36032:CDS 50.0%
! TCCATCAGATTGGCCACCAA+CGG - chr8.1:52229441-52229460 None:intergenic 50.0%
! TGTTTTTCCCCACTGCTCAG+GGG - chr8.1:52231209-52231228 None:intergenic 50.0%
!! AAGAGAGCGTCCAGAATGAC+AGG + chr8.1:52232763-52232782 MS.gene36032:CDS 50.0%
!!! GTTGTTTTTCCCCACTGCTC+AGG - chr8.1:52231211-52231230 None:intergenic 50.0%
AACCTCCCTTGACACCATCG+CGG - chr8.1:52230789-52230808 None:intergenic 55.0%
ACAGGATCACCTGGCTGATC+AGG - chr8.1:52232691-52232710 None:intergenic 55.0%
ACCTGGCTGATCAGGAGATG+GGG - chr8.1:52232683-52232702 None:intergenic 55.0%
AGACGAAGACTGGCATTCGG+GGG - chr8.1:52231295-52231314 None:intergenic 55.0%
AGATCCTTCCCCTGAGCAGT+GGG + chr8.1:52231198-52231217 MS.gene36032:CDS 55.0%
ATGGAGGGGCTGCATTTGAG+AGG + chr8.1:52231317-52231336 MS.gene36032:CDS 55.0%
CAACGAGGTTCAAGAGCGGA+GGG - chr8.1:52229563-52229582 None:intergenic 55.0%
CACCTGGCTGATCAGGAGAT+GGG - chr8.1:52232684-52232703 None:intergenic 55.0%
CCACATGAGAGATCTGCCTG+CGG - chr8.1:52230744-52230763 None:intergenic 55.0%
CTTTCTTGACCGGGTGGATG+TGG - chr8.1:52229324-52229343 None:intergenic 55.0%
GAGCGGTCTCAAAGTGGCAT+TGG + chr8.1:52231238-52231257 MS.gene36032:CDS 55.0%
GATCAGGAGATGGGGTCTCA+GGG - chr8.1:52232675-52232694 None:intergenic 55.0%
GATCTCTCATGTGGACTCGG+AGG + chr8.1:52230750-52230769 MS.gene36032:CDS 55.0%
GCACTGGAGGAAACAACACC+AGG + chr8.1:52232601-52232620 MS.gene36032:CDS 55.0%
GCAGACCTGTGAGTATGGAC+TGG - chr8.1:52232422-52232441 None:intergenic 55.0%
GGATGTGGATGGGGTCTTTG+TGG - chr8.1:52229309-52229328 None:intergenic 55.0%
GGGTCTCAGGGATAGTCATC+TGG - chr8.1:52232663-52232682 None:intergenic 55.0%
GTAGGCGAAGAAGGGTGAAC+CGG + chr8.1:52230023-52230042 MS.gene36032:intron 55.0%
GTTGCCCCTATCCTTAGGCA+GGG - chr8.1:52230704-52230723 None:intergenic 55.0%
TCACCTGGCTGATCAGGAGA+TGG - chr8.1:52232685-52232704 None:intergenic 55.0%
TGAATGCCCCCCAGTCTCAA+GGG + chr8.1:52231375-52231394 MS.gene36032:CDS 55.0%
TGATCAGGAGATGGGGTCTC+AGG - chr8.1:52232676-52232695 None:intergenic 55.0%
TGGAGGGGCTGCATTTGAGA+GGG + chr8.1:52231318-52231337 MS.gene36032:CDS 55.0%
TGGGGGAAGAGGACTAACAG+AGG + chr8.1:52231557-52231576 MS.gene36032:CDS 55.0%
TGTGGCCCTGCCTAAGGATA+GGG + chr8.1:52230696-52230715 MS.gene36032:CDS 55.0%
TGTTGCCCCTATCCTTAGGC+AGG - chr8.1:52230705-52230724 None:intergenic 55.0%
TTAGTCCTCTTCCCCCACCT+CGG - chr8.1:52231554-52231573 None:intergenic 55.0%
TTGAATGCCCCCCAGTCTCA+AGG + chr8.1:52231374-52231393 MS.gene36032:CDS 55.0%
TTGACCGGGTGGATGTGGAT+GGG - chr8.1:52229319-52229338 None:intergenic 55.0%
TTGTGGCCCTGCCTAAGGAT+AGG + chr8.1:52230695-52230714 MS.gene36032:CDS 55.0%
TTTACCTGGAAGCGGCAACG+AGG - chr8.1:52229578-52229597 None:intergenic 55.0%
! AGTGGCATTGGGATTTGGCC+TGG + chr8.1:52231250-52231269 MS.gene36032:CDS 55.0%
! ATCGCCTTGTTGTGGCTCTC+GGG + chr8.1:52233567-52233586 MS.gene36032:CDS 55.0%
! CACACCGGGGTTTGTTCTCA+AGG + chr8.1:52229914-52229933 MS.gene36032:CDS 55.0%
! CACGTGCTGCTGCTAGATCA+TGG + chr8.1:52231595-52231614 MS.gene36032:CDS 55.0%
! CATCTCCGCGATGGTGTCAA+GGG + chr8.1:52230781-52230800 MS.gene36032:CDS 55.0%
! CCTTTTCCCTTGAGACTGGG+GGG - chr8.1:52231384-52231403 None:intergenic 55.0%
! GAAGCGTTTATGCCGGCACA+AGG - chr8.1:52232463-52232482 None:intergenic 55.0%
! GATCGCCTTGTTGTGGCTCT+CGG + chr8.1:52233566-52233585 MS.gene36032:CDS 55.0%
! GGAGGGCATAGAAAGGAGCT+TGG + chr8.1:52232715-52232734 MS.gene36032:CDS 55.0%
! TCATCTCCGCGATGGTGTCA+AGG + chr8.1:52230780-52230799 MS.gene36032:CDS 55.0%
! TCCCTTCTCGAAGCACTCCT+CGG + chr8.1:52229467-52229486 MS.gene36032:CDS 55.0%
!! AACCGAGGAGTGCTTCGAGA+AGG - chr8.1:52229472-52229491 None:intergenic 55.0%
!! ACCGAGGAGTGCTTCGAGAA+GGG - chr8.1:52229471-52229490 None:intergenic 55.0%
!! CGAACGTGTGCTGCTTTACC+TGG - chr8.1:52232622-52232641 None:intergenic 55.0%
!! TGAGACTGGGGGGCATTCAA+TGG - chr8.1:52231374-52231393 None:intergenic 55.0%
ACCACCAGGCCAACCCAAGT+GGG - chr8.1:52230430-52230449 None:intergenic 60.0%
ACCCCATCTCCTGATCAGCC+AGG + chr8.1:52232679-52232698 MS.gene36032:CDS 60.0%
AGACCCCATCCACATCCACC+CGG + chr8.1:52229312-52229331 MS.gene36032:CDS 60.0%
AGCGCCCCTAAAGCTGGAAC+TGG - chr8.1:52233060-52233079 None:intergenic 60.0%
CAGATCCTTCCCCTGAGCAG+TGG + chr8.1:52231197-52231216 MS.gene36032:CDS 60.0%
CCAACCCGAGAGCCACAACA+AGG - chr8.1:52233574-52233593 None:intergenic 60.0%
CCCCCCAGTCTCAAGGGAAA+AGG + chr8.1:52231381-52231400 MS.gene36032:CDS 60.0%
CCGCAGGCAGATCTCTCATG+TGG + chr8.1:52230741-52230760 MS.gene36032:CDS 60.0%
CTTGACCGGGTGGATGTGGA+TGG - chr8.1:52229320-52229339 None:intergenic 60.0%
GACGAAGACTGGCATTCGGG+GGG - chr8.1:52231294-52231313 None:intergenic 60.0%
GAGCCACAACAAGGCGATCG+CGG - chr8.1:52233565-52233584 None:intergenic 60.0%
GATCCTTCCCCTGAGCAGTG+GGG + chr8.1:52231199-52231218 MS.gene36032:CDS 60.0%
GCAACGAGGTTCAAGAGCGG+AGG - chr8.1:52229564-52229583 None:intergenic 60.0%
GCGGCAACGAGGTTCAAGAG+CGG - chr8.1:52229567-52229586 None:intergenic 60.0%
GGATGGGGTCTTTGTGGGAG+TGG - chr8.1:52229303-52229322 None:intergenic 60.0%
GGCATTCGGGGGGTTCACAT+CGG - chr8.1:52231284-52231303 None:intergenic 60.0%
GGTCTTTGTGGGAGTGGTGG+TGG - chr8.1:52229297-52229316 None:intergenic 60.0%
GTGGCCCTGCCTAAGGATAG+GGG + chr8.1:52230697-52230716 MS.gene36032:CDS 60.0%
TGACCGGGTGGATGTGGATG+GGG - chr8.1:52229318-52229337 None:intergenic 60.0%
TGGGGTCTTTGTGGGAGTGG+TGG - chr8.1:52229300-52229319 None:intergenic 60.0%
TTTCCCCACTGCTCAGGGGA+AGG - chr8.1:52231205-52231224 None:intergenic 60.0%
! CAGGCCAACCCAAGTGGGTT+TGG - chr8.1:52230425-52230444 None:intergenic 60.0%
! CCTTGTTGTGGCTCTCGGGT+TGG + chr8.1:52233571-52233590 MS.gene36032:CDS 60.0%
! GGAGTGCTTTCTTGACCGGG+TGG - chr8.1:52229330-52229349 None:intergenic 60.0%
! TGAACCTCGTTGCCGCTTCC+AGG + chr8.1:52229571-52229590 MS.gene36032:CDS 60.0%
!! CAAACCCACTTGGGTTGGCC+TGG + chr8.1:52230423-52230442 MS.gene36032:intron 60.0%
!! CAAGCCGCTGCTGTCGCTTT+CGG + chr8.1:52229386-52229405 MS.gene36032:CDS 60.0%
!! GCCGTTGGTGGCCAATCTGA+TGG + chr8.1:52229437-52229456 MS.gene36032:CDS 60.0%
!! GTGGTGTTGGCTTGGGACCT+TGG + chr8.1:52230445-52230464 MS.gene36032:intron 60.0%
!! TGGCCTGGTGGTGTTGGCTT+GGG + chr8.1:52230438-52230457 MS.gene36032:intron 60.0%
!! TTGGCCTGGTGGTGTTGGCT+TGG + chr8.1:52230437-52230456 MS.gene36032:intron 60.0%
!! TTGGGTTGGCCTGGTGGTGT+TGG + chr8.1:52230432-52230451 MS.gene36032:intron 60.0%
CACCACCAGGCCAACCCAAG+TGG - chr8.1:52230431-52230450 None:intergenic 65.0%
CGAAAGCGACAGCAGCGGCT+TGG - chr8.1:52229388-52229407 None:intergenic 65.0%
CGGACAATCGCGGCCAAGTG+AGG - chr8.1:52230321-52230340 None:intergenic 65.0%
CTCGCCGAAAGCGACAGCAG+CGG - chr8.1:52229393-52229412 None:intergenic 65.0%
GGTCCCAAGCCAACACCACC+AGG - chr8.1:52230444-52230463 None:intergenic 65.0%
TTGCCCATGCTGGCCGAGGT+GGG + chr8.1:52231538-52231557 MS.gene36032:CDS 65.0%
TTGCTTGCCCATGCTGGCCG+AGG + chr8.1:52231534-52231553 MS.gene36032:CDS 65.0%
! CAGCCGCGATCGCCTTGTTG+TGG + chr8.1:52233559-52233578 MS.gene36032:intron 65.0%
! CGACAGCAGCGGCTTGGAGA+CGG - chr8.1:52229382-52229401 None:intergenic 65.0%
! CTCCGCGATGGTGTCAAGGG+AGG + chr8.1:52230784-52230803 MS.gene36032:CDS 65.0%
!! ACCCACTTGGGTTGGCCTGG+TGG + chr8.1:52230426-52230445 MS.gene36032:intron 65.0%
CTTGCCCATGCTGGCCGAGG+TGG + chr8.1:52231537-52231556 MS.gene36032:CDS 70.0%
TCCCCCACCTCGGCCAGCAT+GGG - chr8.1:52231544-52231563 None:intergenic 70.0%
TGCCCATGCTGGCCGAGGTG+GGG + chr8.1:52231539-52231558 MS.gene36032:CDS 70.0%
TTCCCCCACCTCGGCCAGCA+TGG - chr8.1:52231545-52231564 None:intergenic 70.0%
GCCCATGCTGGCCGAGGTGG+GGG + chr8.1:52231540-52231559 MS.gene36032:CDS 75.0%
GCTGGCCGAGGTGGGGGAAG+AGG + chr8.1:52231546-52231565 MS.gene36032:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 52229287 52233748 52229287 ID=MS.gene36032
chr8.1 mRNA 52229287 52233748 52229287 ID=MS.gene36032.t1;Parent=MS.gene36032
chr8.1 exon 52229287 52229592 52229287 ID=MS.gene36032.t1.exon1;Parent=MS.gene36032.t1
chr8.1 CDS 52229287 52229592 52229287 ID=cds.MS.gene36032.t1;Parent=MS.gene36032.t1
chr8.1 exon 52229744 52229935 52229744 ID=MS.gene36032.t1.exon2;Parent=MS.gene36032.t1
chr8.1 CDS 52229744 52229935 52229744 ID=cds.MS.gene36032.t1;Parent=MS.gene36032.t1
chr8.1 exon 52230027 52230233 52230027 ID=MS.gene36032.t1.exon3;Parent=MS.gene36032.t1
chr8.1 CDS 52230027 52230233 52230027 ID=cds.MS.gene36032.t1;Parent=MS.gene36032.t1
chr8.1 exon 52230619 52231047 52230619 ID=MS.gene36032.t1.exon4;Parent=MS.gene36032.t1
chr8.1 CDS 52230619 52231047 52230619 ID=cds.MS.gene36032.t1;Parent=MS.gene36032.t1
chr8.1 exon 52231175 52231402 52231175 ID=MS.gene36032.t1.exon5;Parent=MS.gene36032.t1
chr8.1 CDS 52231175 52231402 52231175 ID=cds.MS.gene36032.t1;Parent=MS.gene36032.t1
chr8.1 exon 52231522 52231717 52231522 ID=MS.gene36032.t1.exon6;Parent=MS.gene36032.t1
chr8.1 CDS 52231522 52231717 52231522 ID=cds.MS.gene36032.t1;Parent=MS.gene36032.t1
chr8.1 exon 52232287 52232971 52232287 ID=MS.gene36032.t1.exon7;Parent=MS.gene36032.t1
chr8.1 CDS 52232287 52232971 52232287 ID=cds.MS.gene36032.t1;Parent=MS.gene36032.t1
chr8.1 exon 52233562 52233748 52233562 ID=MS.gene36032.t1.exon8;Parent=MS.gene36032.t1
chr8.1 CDS 52233562 52233748 52233562 ID=cds.MS.gene36032.t1;Parent=MS.gene36032.t1
Gene Sequence

>MS.gene36032

ATGTCATCCACCACCACTCCCACAAAGACCCCATCCACATCCACCCGGTCAAGAAAGCACTCCGATTCCAAATCTCGCTTCGAAGCTTACAACCGTCTCCAAGCCGCTGCTGTCGCTTTCGGCGAGACTCTCCCCATCCCTGAAATTGTTGCCGTTGGTGGCCAATCTGATGGAAAGAGCTCCCTTCTCGAAGCACTCCTCGGTTTTCGCTTCAATGTCCGTGAAGTTGAGATGGGTACTCGCCGCCCTCTTATTCTTCAAATGCTTCACGATCCCTCCGCTCTTGAACCTCGTTGCCGCTTCCAGGTAAATTCTTTCATTCTCTCATCCAACATCGTGTCAACGTGTTAGTGTTCGTGTCAGTGCTTCACAAATTCTTATTGGTTTCATTTTGTGTCTGTTAATTCATGTAATTTTGGAAGAATGATTTTGAGTGTTGTGTAAAAAAATAATACAGGAGGAAGATTCAGAAGAGTATGGAAGTCCGGTGGTTTCGGCATCTACGATTGCTGACATTATAAAGTCTCGAACCGAAGCACTTTTGAAGATAACCAAAACAGCAGTTTCTCCTAAGCCAATTGTACTCAAAGCTGAATACGCACACTGTCCAAATCTTACCATTATTGACACACCGGGGTTTGTTCTCAAGGTATTTGTTGTAATGCTTGAATGATAAGTGATTCGACTGATGGTATGTTTAATTGGAAATTTGTGTGAGATCTGATTGTTTTGTATCGTAGGCGAAGAAGGGTGAACCGGAGAACACGCCTGATGAGATTCTTTCCATGGTGAAGACATTGGCTACTCCTCCACACCGTATACTCTTGTTCCTTCAACAAAGTAGTGTGGAATGGTGCTCCTCTTTGTGGTTAGACTCTATTCGTGAAATTGATCCCACGTTTAGACGGACAATCATTGTTGTCTCCAAATTTGATAATCGTCTCAAGGTACTGTTAATTTTGAAGTTGTCATTTGGTAGTATATACATCACTGTTCTAAATAAACGGGTGCTAGAGAATCACTAATTGTAGCCTCACTTGGCCGCGATTGTCCGTAATATTAAAGATTGCAATTGCAATGTGACCGTGAATGTTATTGCAACTTTGATTTAAAACCTTGTATAAAATGATACATACCAAACCCACTTGGGTTGGCCTGGTGGTGTTGGCTTGGGACCTTGGAGTGTGCTCTTCTCAAGGTCTCAAGTTTGATTTTCTCCGGTGTCAATTTAGGTGTGCTAGTTTAGCTTATTCAAAAAAAGAAGATACATATTATTGTTTTAAAGGGTTCAATAATGGTTTTAGTGACGAGTTAGTAATGTGATACATGTAGGAATTTACTGATCGGTGGGAAGTGGATCGCTATTTGAGTGCAAGTGGTTACCTTGGAGACAACACTCGACCTTTTTTTGTGGCCCTGCCTAAGGATAGGGGCAACATTTCAAATGAAGAGTTCCGCAGGCAGATCTCTCATGTGGACTCGGAGGTTATGCATCATCTCCGCGATGGTGTCAAGGGAGGTTTTGATGAAGAAAAGTTCAAGTCCTATATTGGTTTTGGCCGTCTAAGGGATTACTTGGAGTCTGAGCTTCAGAAGAAATACAAAGAAGCTGCTCCATCAACTCTTGCCTTGCTTGAGCAAAGGTGTAGTGAGGTCACTTGTGAACTTTCTGGATTGGATTCAAAAATTGTGGCCACTTCAGACATTTCTCATCTGAGGAAATTTGCAATGCTGTGTGCAGCTTCTATCAGCAACCATGTGGTGGGTAATCATAGTTATTATTGTGACAAAGCAAAATTTATTTTGAACTTGGTCATGAACTGAACATTATTATGTATATGCAAGCTAGTAACTAACTATTTTACTCTACAAATGGATGTTCCATCAGGGTGCCTTGATTGATGGTGCAGCAGATCCTTCCCCTGAGCAGTGGGGAAAAACAACGGTAGAAGAGCGGTCTCAAAGTGGCATTGGGATTTGGCCTGGTGTCATCACCGATGTGAACCCCCCGAATGCCAGTCTTCGTCTTTATGGAGGGGCTGCATTTGAGAGGGTGATGCATGAATTTCGCTGTGCTGCATATTCCATTGAATGCCCCCCAGTCTCAAGGGAAAAGGTGATATTATTTATATATATTTTTTTTTCATAAACTCATATGATCTGAGGATTGTTTTATCTTCTTTATTCCTTTCATTTCAAATTGAAATTCATTGGTATCTATCATTACTTTAATAGGTTGCAAATATATTGCTTGCCCATGCTGGCCGAGGTGGGGGAAGAGGACTAACAGAGGCTGCTGCAGAGATTGCACGTGCTGCTGCTAGATCATGGCTTGCTCCTCTTCTTGATACTGCATGTGACCGTCTTGCTTTTGTTTTAGGAAGCTTATTTGATTTGGCTCTAGAAAGAAACCGTAGGCATGATTCAGCATGTATGTGAAGCTTCTTCCTTGCTGACATACCCTTCTGTCTTATTTATGATGTTCTTTTGTCTTCGCTACTTGAATGTTCAATATTTTTTCCCCAAGTCTTGGATAACGATAGTCTCATACCCCGTCTCAATGGAGTTTGAGAAATGTAGGAAAGAGAGAGATATTAAGAGAAGAAGAAAGGAAATAAAGAGAAAGAAATTGGTAAATGTGAGAAGAGAAAATAGAAAGAAATTTAAATAGATATACTCAGTCTGATTCTTCAGCTTAATGATATTTTGAAGTGCCATTTGAACCCTAATTTATTTCCTGTCTATGCAATTAAATATTTCATTGTCCTTCCAGAAATTAACTTCTGTGTTTTGGGAGTACTATTGGTTTATTTCATTTCTTCTGGAATTTTTCCCTTTAGATTCTAACTATATTTTGTTTAGTTTGAGATAAAGCATACAGTCCCTAAGATACTGATAGAGCTGAATGGTGATAATGTGAAATTTTATCTCCTATATTTTGTTTCATTTCTTGCAATTGACTAGAAAAAAAAGACTGACTGTTGTTTGTTTTCCATGAAGATGGGATAAAAACGGGAAACATGGATGGCTATGTAGGTTTTCATGCTGCTTTAAGGTGTGCTTACATTCGGTTCTTAAAGGATCTTGCTAAGCAGTGCAAGCAGCTTGTTAGGCACCACCTTGATTCAGTTACCAGTCCATACTCACAGGTCTGCTACTTCAATGACTTTCAACCTTGTGCCGGCATAAACGCTTCAAGTTTCAACAAATTTCCCCAGGTTTCAGCCTCTTCATTTTTTCTTGAATTGAGTGATACAAATTCTGCTTCCCATGATGTAAGGAGGGATCAAGAAAATATACCTCCAGAAAAGAATGCACTGGAGGAAACAACACCAGGTAAAGCAGCACACGTTCGAGAGAGTTTGCGAGAAAGCCAGATGACTATCCCTGAGACCCCATCTCCTGATCAGCCAGGTGATCCTGTATATGGAGGGCATAGAAAGGAGCTTGGAATATGCAATGACATGGGGCCAAGAAAGAGAGCGTCCAGAATGACAGGAAATGGCAAAAATTCTGACTATATTAGACTTCAAAATGATTCCATTTTATTTGGAAATGGGGAGAGAACAGGATCAGCGTACTCAGAAATCTGTTTATCAGCTGCCCAGCATTTCGCACGTATACGTGAAGTTCTTGTTGAAAGAGGTGTTACATCGACATTAAACTCTGGATTCCTGACTCCTTGGTAAGCTTCTATCTTGTGTAAAATCAACTTATTTATTTTCTGCGATCTTGGATGCTTAAAAGTGGCAAGGTACTTAAACAAATTTCCAGTTCCAGCTTTAGGGGCGCTATATTGATAAGTGCAATATTTTCACTTCACAAACACTCAAAAGAAGTTACTTTATGTAGAATGTTCTCGCTTCAGAACTACTAGAACTAATACCTTTCTGTGTCCATATTTATGTCACTTATTTTCAAAAGCATCATACTGTTTCTCATCCATCACCTTCAGTTGCAATTTAACCGGAAGCCTCAAAGTTATTTATTTATTTAATTTAATTTATTTTCTGGTTGATTTAATTTGTTCGACAAGATAAGGTTGGTAACTTTTTCCAAATACATAAATACTACTAAATATGCCGGTATTTCATGTTTCTTCATTTGAATTGCTTTTCCTCAATCCTCCCTCAATGATAATGATAGTGCTTACTTTCATTTGCTTACTTTTCTTCAAGCTACTGGATGACATACAATTTTTAATGTGGTCCACATAAGTATATTCAATAATTCTTCATTCACCATAATACCACCTTGTTGTGCTTGTTTGTGCAGCCGCGATCGCCTTGTTGTGGCTCTCGGGTTGGATTTATTTGCTGTGAACGATGAGAAATTCATGGACATGTTTGTCGCTCCTGGTGCCATAGATGTTCTACAAAATGAACGTGAGTCTCTTATGAAGCGTCAGAAGATACTCCATTCTTGCTTGAATGAGTTCAAAAACGTTGCTCGGTCCCTTTGA
Protein sequence

>MS.gene36032.t1

MSSTTTPTKTPSTSTRSRKHSDSKSRFEAYNRLQAAAVAFGETLPIPEIVAVGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMLHDPSALEPRCRFQEEDSEEYGSPVVSASTIADIIKSRTEALLKITKTAVSPKPIVLKAEYAHCPNLTIIDTPGFVLKAKKGEPENTPDEILSMVKTLATPPHRILLFLQQSSVEWCSSLWLDSIREIDPTFRRTIIVVSKFDNRLKEFTDRWEVDRYLSASGYLGDNTRPFFVALPKDRGNISNEEFRRQISHVDSEVMHHLRDGVKGGFDEEKFKSYIGFGRLRDYLESELQKKYKEAAPSTLALLEQRCSEVTCELSGLDSKIVATSDISHLRKFAMLCAASISNHVGALIDGAADPSPEQWGKTTVEERSQSGIGIWPGVITDVNPPNASLRLYGGAAFERVMHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGLTEAAAEIARAAARSWLAPLLDTACDRLAFVLGSLFDLALERNRRHDSAYGIKTGNMDGYVGFHAALRCAYIRFLKDLAKQCKQLVRHHLDSVTSPYSQVCYFNDFQPCAGINASSFNKFPQVSASSFFLELSDTNSASHDVRRDQENIPPEKNALEETTPGKAAHVRESLRESQMTIPETPSPDQPGDPVYGGHRKELGICNDMGPRKRASRMTGNGKNSDYIRLQNDSILFGNGERTGSAYSEICLSAAQHFARIREVLVERGVTSTLNSGFLTPCRDRLVVALGLDLFAVNDEKFMDMFVAPGAIDVLQNERESLMKRQKILHSCLNEFKNVARSL