Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36370.t1 | KEH39543.1 | 85.9 | 263 | 34 | 3 | 1 | 262 | 1 | 261 | 6.40E-110 | 407.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36370.t1 | Q8LAL2 | 50.2 | 253 | 100 | 6 | 7 | 258 | 28 | 255 | 2.5e-54 | 213.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36370.t1 | A0A072VDM5 | 85.9 | 263 | 34 | 3 | 1 | 262 | 1 | 261 | 4.6e-110 | 407.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene36370.t1 | TR | AUX/IAA |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene36370 | 0.806774 | 6.99E-50 | -1.69E-46 |
MS.gene049350 | MS.gene36370 | 0.808114 | 3.63E-50 | -1.69E-46 |
MS.gene049711 | MS.gene36370 | 0.830113 | 3.53E-55 | -1.69E-46 |
MS.gene049850 | MS.gene36370 | 0.822737 | 2.02E-53 | -1.69E-46 |
MS.gene050241 | MS.gene36370 | 0.806784 | 6.95E-50 | -1.69E-46 |
MS.gene050807 | MS.gene36370 | 0.822778 | 1.97E-53 | -1.69E-46 |
MS.gene050808 | MS.gene36370 | 0.801266 | 9.77E-49 | -1.69E-46 |
MS.gene050901 | MS.gene36370 | 0.81313 | 2.99E-51 | -1.69E-46 |
MS.gene051279 | MS.gene36370 | 0.833215 | 6.06E-56 | -1.69E-46 |
MS.gene05157 | MS.gene36370 | 0.813375 | 2.64E-51 | -1.69E-46 |
MS.gene051719 | MS.gene36370 | 0.839545 | 1.49E-57 | -1.69E-46 |
MS.gene051720 | MS.gene36370 | 0.860832 | 1.57E-63 | -1.69E-46 |
MS.gene051744 | MS.gene36370 | 0.803654 | 3.14E-49 | -1.69E-46 |
MS.gene052037 | MS.gene36370 | 0.80216 | 6.40E-49 | -1.69E-46 |
MS.gene052516 | MS.gene36370 | 0.80357 | 3.27E-49 | -1.69E-46 |
MS.gene052665 | MS.gene36370 | 0.81751 | 3.18E-52 | -1.69E-46 |
MS.gene053144 | MS.gene36370 | 0.823757 | 1.17E-53 | -1.69E-46 |
MS.gene053226 | MS.gene36370 | 0.835705 | 1.44E-56 | -1.69E-46 |
MS.gene053581 | MS.gene36370 | 0.816341 | 5.81E-52 | -1.69E-46 |
MS.gene054584 | MS.gene36370 | 0.826054 | 3.35E-54 | -1.69E-46 |
MS.gene05458 | MS.gene36370 | 0.809072 | 2.27E-50 | -1.69E-46 |
MS.gene054651 | MS.gene36370 | 0.805551 | 1.26E-49 | -1.69E-46 |
MS.gene054824 | MS.gene36370 | 0.801044 | 1.08E-48 | -1.69E-46 |
MS.gene055144 | MS.gene36370 | 0.843275 | 1.55E-58 | -1.69E-46 |
MS.gene055465 | MS.gene36370 | 0.809089 | 2.25E-50 | -1.69E-46 |
MS.gene055466 | MS.gene36370 | 0.810561 | 1.08E-50 | -1.69E-46 |
MS.gene055537 | MS.gene36370 | 0.80177 | 7.70E-49 | -1.69E-46 |
MS.gene055580 | MS.gene36370 | -0.801274 | 9.73E-49 | -1.69E-46 |
MS.gene056005 | MS.gene36370 | 0.826719 | 2.32E-54 | -1.69E-46 |
MS.gene056050 | MS.gene36370 | 0.82948 | 5.03E-55 | -1.69E-46 |
MS.gene056308 | MS.gene36370 | 0.855055 | 8.15E-62 | -1.69E-46 |
MS.gene056507 | MS.gene36370 | 0.821215 | 4.55E-53 | -1.69E-46 |
MS.gene057915 | MS.gene36370 | 0.802355 | 5.84E-49 | -1.69E-46 |
MS.gene058339 | MS.gene36370 | 0.800562 | 1.36E-48 | -1.69E-46 |
MS.gene05847 | MS.gene36370 | 0.802912 | 4.48E-49 | -1.69E-46 |
MS.gene058625 | MS.gene36370 | 0.803156 | 3.99E-49 | -1.69E-46 |
MS.gene05894 | MS.gene36370 | 0.811757 | 5.97E-51 | -1.69E-46 |
MS.gene059725 | MS.gene36370 | 0.820601 | 6.29E-53 | -1.69E-46 |
MS.gene060519 | MS.gene36370 | 0.837546 | 4.88E-57 | -1.69E-46 |
MS.gene060587 | MS.gene36370 | 0.816999 | 4.14E-52 | -1.69E-46 |
MS.gene060603 | MS.gene36370 | 0.816328 | 5.85E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36370.t1 | MTR_2g100780 | 93.916 | 263 | 13 | 3 | 1 | 262 | 1 | 261 | 3.85e-172 | 476 |
MS.gene36370.t1 | MTR_2g100780 | 94.253 | 261 | 12 | 3 | 1 | 260 | 1 | 259 | 9.50e-172 | 475 |
MS.gene36370.t1 | MTR_8g014520 | 55.556 | 270 | 95 | 9 | 6 | 259 | 4 | 264 | 2.72e-81 | 246 |
MS.gene36370.t1 | MTR_8g014520 | 55.556 | 270 | 95 | 9 | 6 | 259 | 4 | 264 | 3.64e-81 | 246 |
MS.gene36370.t1 | MTR_6g488150 | 38.115 | 244 | 119 | 8 | 18 | 255 | 21 | 238 | 5.67e-40 | 139 |
MS.gene36370.t1 | MTR_1g069495 | 40.449 | 178 | 83 | 4 | 96 | 255 | 80 | 252 | 2.07e-37 | 133 |
MS.gene36370.t1 | MTR_8g103030 | 46.497 | 157 | 64 | 4 | 99 | 255 | 141 | 277 | 1.17e-34 | 127 |
MS.gene36370.t1 | MTR_5g030710 | 41.808 | 177 | 82 | 5 | 80 | 255 | 163 | 319 | 1.19e-34 | 128 |
MS.gene36370.t1 | MTR_1g070520 | 34.118 | 255 | 133 | 6 | 4 | 255 | 7 | 229 | 1.36e-34 | 125 |
MS.gene36370.t1 | MTR_2g101500 | 43.931 | 173 | 75 | 5 | 86 | 255 | 157 | 310 | 1.79e-34 | 127 |
MS.gene36370.t1 | MTR_8g067530 | 40.107 | 187 | 90 | 5 | 70 | 255 | 175 | 340 | 3.32e-32 | 122 |
MS.gene36370.t1 | MTR_5g067350 | 42.424 | 165 | 70 | 6 | 94 | 255 | 189 | 331 | 3.27e-31 | 119 |
MS.gene36370.t1 | MTR_1g080860 | 40.116 | 172 | 86 | 3 | 84 | 255 | 83 | 237 | 1.18e-30 | 115 |
MS.gene36370.t1 | MTR_1g080860 | 40.116 | 172 | 86 | 3 | 84 | 255 | 83 | 237 | 1.37e-30 | 115 |
MS.gene36370.t1 | MTR_1g093240 | 40.244 | 164 | 78 | 4 | 92 | 255 | 77 | 220 | 1.29e-29 | 112 |
MS.gene36370.t1 | MTR_1g093240 | 35.678 | 199 | 108 | 4 | 57 | 255 | 42 | 220 | 1.30e-29 | 112 |
MS.gene36370.t1 | MTR_1g040675 | 31.276 | 243 | 101 | 6 | 13 | 255 | 2 | 178 | 8.24e-27 | 103 |
MS.gene36370.t1 | MTR_7g096090 | 37.209 | 172 | 86 | 3 | 84 | 255 | 85 | 234 | 9.80e-26 | 102 |
MS.gene36370.t1 | MTR_1g076270 | 36.842 | 171 | 60 | 6 | 87 | 255 | 50 | 174 | 2.15e-25 | 99.8 |
MS.gene36370.t1 | MTR_1g093350 | 36.842 | 171 | 60 | 6 | 87 | 255 | 50 | 174 | 2.15e-25 | 99.8 |
MS.gene36370.t1 | MTR_1g070830 | 29.876 | 241 | 105 | 7 | 18 | 255 | 18 | 197 | 2.37e-24 | 97.4 |
MS.gene36370.t1 | MTR_1g093240 | 38.776 | 147 | 70 | 4 | 92 | 238 | 77 | 203 | 2.52e-22 | 92.0 |
MS.gene36370.t1 | MTR_4g124300 | 33.562 | 146 | 80 | 2 | 108 | 253 | 53 | 181 | 1.84e-21 | 89.4 |
MS.gene36370.t1 | MTR_7g110790 | 36.364 | 132 | 60 | 5 | 125 | 252 | 44 | 155 | 1.97e-20 | 85.9 |
MS.gene36370.t1 | MTR_6g488150 | 34.682 | 173 | 83 | 6 | 18 | 184 | 21 | 169 | 3.71e-19 | 83.6 |
MS.gene36370.t1 | MTR_1g085750 | 33.333 | 147 | 65 | 6 | 125 | 259 | 49 | 174 | 1.06e-18 | 81.6 |
MS.gene36370.t1 | MTR_4g011880 | 31.902 | 163 | 58 | 4 | 99 | 259 | 55 | 166 | 1.85e-18 | 81.3 |
MS.gene36370.t1 | MTR_1g040675 | 29.204 | 226 | 94 | 6 | 13 | 238 | 2 | 161 | 3.76e-18 | 79.7 |
MS.gene36370.t1 | MTR_4g115075 | 29.487 | 156 | 69 | 3 | 98 | 253 | 92 | 206 | 8.41e-18 | 80.1 |
MS.gene36370.t1 | MTR_2g102490 | 37.815 | 119 | 64 | 2 | 137 | 254 | 74 | 183 | 1.16e-17 | 79.3 |
MS.gene36370.t1 | MTR_3g106850 | 29.936 | 157 | 74 | 5 | 99 | 255 | 89 | 209 | 2.79e-15 | 73.2 |
MS.gene36370.t1 | MTR_1g085750 | 33.333 | 96 | 44 | 3 | 145 | 238 | 79 | 156 | 3.09e-12 | 63.5 |
MS.gene36370.t1 | MTR_5g067350 | 39.362 | 94 | 37 | 3 | 94 | 184 | 189 | 265 | 6.02e-12 | 64.7 |
MS.gene36370.t1 | MTR_2g005240 | 30.909 | 110 | 54 | 2 | 153 | 262 | 551 | 638 | 2.16e-11 | 64.3 |
MS.gene36370.t1 | MTR_1g109510 | 34.314 | 102 | 49 | 2 | 151 | 252 | 85 | 168 | 4.70e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene36370.t1 | AT3G16500 | 55.422 | 249 | 85 | 6 | 11 | 258 | 32 | 255 | 7.28e-80 | 242 |
MS.gene36370.t1 | AT3G16500 | 55.000 | 260 | 90 | 7 | 11 | 268 | 32 | 266 | 1.08e-79 | 242 |
MS.gene36370.t1 | AT1G51950 | 49.799 | 249 | 91 | 4 | 12 | 258 | 37 | 253 | 6.24e-72 | 222 |
MS.gene36370.t1 | AT5G25890 | 37.449 | 243 | 70 | 6 | 13 | 255 | 3 | 163 | 2.21e-38 | 133 |
MS.gene36370.t1 | AT4G28640 | 42.935 | 184 | 84 | 6 | 92 | 267 | 76 | 246 | 9.89e-37 | 131 |
MS.gene36370.t1 | AT4G28640 | 43.023 | 172 | 80 | 5 | 92 | 255 | 76 | 237 | 9.16e-36 | 128 |
MS.gene36370.t1 | AT4G28640 | 43.023 | 172 | 80 | 5 | 92 | 255 | 76 | 237 | 4.09e-35 | 128 |
MS.gene36370.t1 | AT4G29080 | 35.472 | 265 | 131 | 10 | 15 | 255 | 41 | 289 | 1.64e-34 | 127 |
MS.gene36370.t1 | AT2G33310 | 41.477 | 176 | 73 | 5 | 99 | 262 | 77 | 234 | 2.95e-34 | 124 |
MS.gene36370.t1 | AT2G33310 | 43.195 | 169 | 66 | 5 | 99 | 255 | 76 | 226 | 3.11e-34 | 124 |
MS.gene36370.t1 | AT2G33310 | 43.195 | 169 | 66 | 5 | 99 | 255 | 76 | 226 | 3.11e-34 | 124 |
MS.gene36370.t1 | AT1G04550 | 39.247 | 186 | 96 | 5 | 81 | 260 | 50 | 224 | 5.35e-33 | 121 |
MS.gene36370.t1 | AT2G22670 | 40.805 | 174 | 81 | 5 | 94 | 264 | 161 | 315 | 1.95e-31 | 119 |
MS.gene36370.t1 | AT2G22670 | 40.805 | 174 | 81 | 5 | 94 | 264 | 161 | 315 | 1.95e-31 | 119 |
MS.gene36370.t1 | AT1G04100 | 40.741 | 162 | 87 | 4 | 100 | 254 | 95 | 254 | 2.11e-31 | 117 |
MS.gene36370.t1 | AT2G22670 | 41.975 | 162 | 75 | 4 | 94 | 255 | 161 | 303 | 2.54e-31 | 119 |
MS.gene36370.t1 | AT2G22670 | 41.975 | 162 | 75 | 4 | 94 | 255 | 161 | 303 | 2.54e-31 | 119 |
MS.gene36370.t1 | AT2G22670 | 41.975 | 162 | 75 | 4 | 94 | 255 | 178 | 320 | 3.63e-31 | 119 |
MS.gene36370.t1 | AT5G65670 | 37.245 | 196 | 100 | 6 | 61 | 255 | 147 | 320 | 6.67e-30 | 115 |
MS.gene36370.t1 | AT5G65670 | 37.245 | 196 | 100 | 6 | 61 | 255 | 147 | 320 | 7.52e-30 | 115 |
MS.gene36370.t1 | AT3G04730 | 34.286 | 245 | 122 | 8 | 18 | 255 | 8 | 220 | 7.66e-30 | 112 |
MS.gene36370.t1 | AT3G23050 | 34.426 | 244 | 125 | 7 | 18 | 255 | 12 | 226 | 1.46e-28 | 109 |
MS.gene36370.t1 | AT1G04250 | 32.365 | 241 | 126 | 6 | 15 | 255 | 10 | 213 | 2.87e-28 | 108 |
MS.gene36370.t1 | AT4G14550 | 39.024 | 164 | 79 | 4 | 92 | 255 | 70 | 212 | 1.02e-27 | 107 |
MS.gene36370.t1 | AT4G14550 | 39.024 | 164 | 79 | 4 | 92 | 255 | 70 | 212 | 1.12e-27 | 107 |
MS.gene36370.t1 | AT3G15540 | 30.709 | 254 | 107 | 7 | 8 | 259 | 2 | 188 | 1.94e-27 | 105 |
MS.gene36370.t1 | AT1G04240 | 30.769 | 195 | 85 | 5 | 71 | 255 | 27 | 181 | 2.87e-25 | 99.8 |
MS.gene36370.t1 | AT1G04240 | 30.769 | 195 | 85 | 5 | 71 | 255 | 127 | 281 | 2.66e-24 | 99.4 |
MS.gene36370.t1 | AT5G43700 | 32.203 | 177 | 75 | 4 | 86 | 259 | 47 | 181 | 3.17e-24 | 96.7 |
MS.gene36370.t1 | AT3G23030 | 34.783 | 161 | 54 | 5 | 99 | 259 | 61 | 170 | 8.05e-22 | 90.1 |
MS.gene36370.t1 | AT3G23030 | 34.783 | 161 | 54 | 5 | 99 | 259 | 148 | 257 | 3.20e-21 | 90.5 |
MS.gene36370.t1 | AT1G52830 | 32.258 | 186 | 78 | 6 | 79 | 264 | 52 | 189 | 5.67e-21 | 88.2 |
MS.gene36370.t1 | AT3G23050 | 32.609 | 230 | 120 | 7 | 15 | 238 | 9 | 209 | 6.25e-21 | 88.6 |
MS.gene36370.t1 | AT4G14550 | 37.415 | 147 | 71 | 4 | 92 | 238 | 70 | 195 | 2.09e-20 | 87.0 |
MS.gene36370.t1 | AT3G17600 | 31.081 | 148 | 75 | 3 | 111 | 252 | 28 | 154 | 4.05e-20 | 85.1 |
MS.gene36370.t1 | AT3G62100 | 37.500 | 104 | 48 | 2 | 150 | 253 | 83 | 169 | 1.19e-18 | 81.6 |
MS.gene36370.t1 | AT2G46990 | 38.462 | 104 | 47 | 2 | 150 | 253 | 85 | 171 | 1.43e-18 | 81.3 |
MS.gene36370.t1 | AT4G14560 | 39.048 | 105 | 47 | 3 | 151 | 255 | 76 | 163 | 8.67e-17 | 76.3 |
MS.gene36370.t1 | AT1G15580 | 30.380 | 158 | 56 | 4 | 99 | 254 | 54 | 159 | 2.52e-16 | 75.1 |
MS.gene36370.t1 | AT4G32280 | 24.859 | 177 | 96 | 4 | 99 | 261 | 95 | 248 | 1.30e-13 | 69.3 |
MS.gene36370.t1 | AT3G62100 | 37.079 | 89 | 39 | 2 | 150 | 238 | 83 | 154 | 6.00e-13 | 65.5 |
MS.gene36370.t1 | AT4G23980 | 34.259 | 108 | 48 | 1 | 153 | 260 | 525 | 609 | 8.69e-13 | 68.6 |
MS.gene36370.t1 | AT4G23980 | 34.259 | 108 | 48 | 1 | 153 | 260 | 527 | 611 | 8.78e-13 | 68.6 |
MS.gene36370.t1 | AT1G04550 | 36.283 | 113 | 66 | 3 | 81 | 187 | 50 | 162 | 1.22e-12 | 65.1 |
MS.gene36370.t1 | AT2G46990 | 37.079 | 89 | 39 | 2 | 150 | 238 | 85 | 156 | 1.34e-12 | 64.7 |
MS.gene36370.t1 | AT2G46530 | 30.833 | 120 | 60 | 1 | 152 | 271 | 406 | 502 | 2.32e-12 | 67.0 |
MS.gene36370.t1 | AT3G23050 | 31.214 | 173 | 88 | 5 | 18 | 184 | 12 | 159 | 2.41e-12 | 64.3 |
MS.gene36370.t1 | AT2G46530 | 30.833 | 120 | 60 | 1 | 152 | 271 | 493 | 589 | 3.01e-12 | 67.0 |
MS.gene36370.t1 | AT2G46530 | 30.833 | 120 | 60 | 1 | 152 | 271 | 514 | 610 | 3.71e-12 | 66.6 |
MS.gene36370.t1 | AT4G32280 | 29.464 | 112 | 56 | 2 | 150 | 261 | 118 | 206 | 8.52e-12 | 63.5 |
MS.gene36370.t1 | AT3G61830 | 30.909 | 110 | 53 | 1 | 153 | 262 | 442 | 528 | 1.58e-11 | 64.7 |
MS.gene36370.t1 | AT3G61830 | 30.909 | 110 | 53 | 1 | 153 | 262 | 493 | 579 | 1.86e-11 | 64.7 |
MS.gene36370.t1 | AT4G14550 | 36.559 | 93 | 42 | 2 | 92 | 184 | 70 | 145 | 3.37e-11 | 61.2 |
Find 52 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCTGTTGAGTCTGAGATTC+TGG | 0.161798 | 2.2:-2512824 | None:intergenic |
AACATATATTAATACCTTTA+AGG | 0.163444 | 2.2:-2513018 | None:intergenic |
GAAAGTGATTACTGGATTAT+TGG | 0.223957 | 2.2:+2513671 | MS.gene36370:CDS |
CTCTTTAGAGGACTCCTTAA+AGG | 0.227479 | 2.2:+2513004 | MS.gene36370:CDS |
GGCCACCAATTCGTTCATTC+AGG | 0.331363 | 2.2:+2512762 | MS.gene36370:CDS |
GAGTCTTTGTTTGTTGTTGT+TGG | 0.336636 | 2.2:-2511048 | None:intergenic |
GAGGAAGAGAAAGTGATTAC+TGG | 0.355323 | 2.2:+2513663 | MS.gene36370:CDS |
CTCTACTCTCTTAGGACAAC+AGG | 0.361485 | 2.2:-2511150 | None:intergenic |
TTCTGTAACTCTACTCTCTT+AGG | 0.365893 | 2.2:-2511158 | None:intergenic |
TTACTATAGTTGTAGTCAAT+AGG | 0.382491 | 2.2:-2512878 | None:intergenic |
AATAGGGAAGGAAAACTTTA+CGG | 0.390843 | 2.2:+2514572 | MS.gene36370:intron |
AGGAAAGAAAGCTTGAACTA+AGG | 0.413057 | 2.2:+2510988 | MS.gene36370:CDS |
GCTGTGGATGAGCTCTTTAG+AGG | 0.423705 | 2.2:+2512992 | MS.gene36370:CDS |
AATGAAGATGCTTACTTCCA+TGG | 0.454416 | 2.2:-2513762 | None:intergenic |
GTCTGAGATTCTGGTTGTGA+TGG | 0.455939 | 2.2:-2512815 | None:intergenic |
AACAAACAAAGACTCTCATT+TGG | 0.459493 | 2.2:+2511056 | MS.gene36370:CDS |
TTCTTCCTGAATGAACGAAT+TGG | 0.461192 | 2.2:-2512767 | None:intergenic |
CACCTGGTGTTGAAGAAGAC+TGG | 0.475839 | 2.2:+2511018 | MS.gene36370:CDS |
AACATGGATGGTGTTCCAAT+TGG | 0.487413 | 2.2:+2512920 | MS.gene36370:CDS |
ATGAGGATAATGAAGGAGAC+AGG | 0.490984 | 2.2:+2513721 | MS.gene36370:CDS |
GGCCAACCCACTACTGGTCC+AGG | 0.495601 | 2.2:-2512743 | None:intergenic |
ACTGGATTATTGGATGGAAG+TGG | 0.500145 | 2.2:+2513681 | MS.gene36370:CDS |
ATTGGTGGCCAACCCACTAC+TGG | 0.512048 | 2.2:-2512749 | None:intergenic |
ATTGACTACAACTATAGTAA+AGG | 0.516581 | 2.2:+2512881 | MS.gene36370:CDS |
CTCCTGGACCAGTAGTGGGT+TGG | 0.519977 | 2.2:+2512741 | MS.gene36370:CDS |
GTGATTACTGGATTATTGGA+TGG | 0.521970 | 2.2:+2513675 | MS.gene36370:CDS |
GAACTAAGGCTTGGTCCACC+TGG | 0.527306 | 2.2:+2511002 | MS.gene36370:CDS |
AACAACAACAATGTTGCTGC+TGG | 0.531158 | 2.2:+2512848 | MS.gene36370:CDS |
AGAGTATACTCTTGTATATG+AGG | 0.532161 | 2.2:+2513704 | MS.gene36370:CDS |
AACTGCTCCTGGACCAGTAG+TGG | 0.534809 | 2.2:+2512736 | MS.gene36370:CDS |
TTTCCAACACCTCTCAGAAA+AGG | 0.535342 | 2.2:+2511207 | MS.gene36370:CDS |
TTCCTGAATGAACGAATTGG+TGG | 0.539764 | 2.2:-2512764 | None:intergenic |
CTTGTATATGAGGATAATGA+AGG | 0.541105 | 2.2:+2513714 | MS.gene36370:CDS |
AGAAAGCTTGAACTAAGGCT+TGG | 0.547085 | 2.2:+2510993 | MS.gene36370:CDS |
TACTTCTCTTCTTCAAACAA+TGG | 0.552628 | 2.2:+2511083 | MS.gene36370:CDS |
GAAGGAGACAGGATGCTTGT+TGG | 0.558754 | 2.2:+2513732 | MS.gene36370:CDS |
ATGAAGATGCTTACTTCCAT+GGG | 0.563137 | 2.2:-2513761 | None:intergenic |
CAACGAGATTCCTCTGCTTG+TGG | 0.563383 | 2.2:+2513624 | MS.gene36370:CDS |
CTTGTTACCACCACAAGCAG+AGG | 0.563731 | 2.2:-2513634 | None:intergenic |
TGAAAATCTTTCTTCAGCTG+TGG | 0.566410 | 2.2:+2512976 | MS.gene36370:CDS |
TGTGTACTCTTGATTTACTG+TGG | 0.566567 | 2.2:+2514598 | MS.gene36370:CDS |
TGCTTGTTGGTGATGTCCCA+TGG | 0.578016 | 2.2:+2513745 | MS.gene36370:CDS |
TGTTTGTATCAACAGTGAAG+AGG | 0.599382 | 2.2:+2514245 | MS.gene36370:CDS |
ACTGCTCCTGGACCAGTAGT+GGG | 0.605389 | 2.2:+2512737 | MS.gene36370:CDS |
CGAGATTCCTCTGCTTGTGG+TGG | 0.607101 | 2.2:+2513627 | MS.gene36370:CDS |
AAGAGAGTAGAGTTACAGAA+TGG | 0.608229 | 2.2:+2511161 | MS.gene36370:CDS |
AACCAGTCTTCTTCAACACC+AGG | 0.614487 | 2.2:-2511020 | None:intergenic |
TTTGTTAAGATCAACATGGA+TGG | 0.616572 | 2.2:+2512908 | MS.gene36370:CDS |
TGGTGGTAACAAGAAAGAAG+AGG | 0.622799 | 2.2:+2513644 | MS.gene36370:CDS |
AAATGAGAGAGAATCTTCTG+AGG | 0.628593 | 2.2:+2510968 | MS.gene36370:CDS |
TTTGTTTGTTAAGATCAACA+TGG | 0.679515 | 2.2:+2512904 | MS.gene36370:CDS |
CAGTCTTCTTCAACACCAGG+TGG | 0.689120 | 2.2:-2511017 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTAATTTTAATTTTTCCT+TGG | + | chr2.2:2511710-2511729 | MS.gene36370:intron | 10.0% |
!!! | TTTTTTTTTTTTTTTTCAGT+TGG | + | chr2.2:2514401-2514420 | MS.gene36370:intron | 10.0% |
!! | AAAACTTTAGATATAGAAAA+AGG | - | chr2.2:2511240-2511259 | None:intergenic | 15.0% |
!! | AACATATATTAATACCTTTA+AGG | - | chr2.2:2513021-2513040 | None:intergenic | 15.0% |
!! | AATAAAAATTCAAAGCAATA+TGG | - | chr2.2:2513534-2513553 | None:intergenic | 15.0% |
!! | ACTATGATTGAATTTAAAAA+AGG | - | chr2.2:2513050-2513069 | None:intergenic | 15.0% |
!! | ATATTTACAATATGTTAGTT+AGG | - | chr2.2:2512521-2512540 | None:intergenic | 15.0% |
!! | ATTTATAAAACTCTAACTAT+TGG | - | chr2.2:2513214-2513233 | None:intergenic | 15.0% |
!! | CAAAAACTTAAAATAAAAAG+TGG | + | chr2.2:2512428-2512447 | MS.gene36370:intron | 15.0% |
!! | CTATGATTGAATTTAAAAAA+GGG | - | chr2.2:2513049-2513068 | None:intergenic | 15.0% |
!! | TAACATATTGTAAATATGTA+GGG | + | chr2.2:2512524-2512543 | MS.gene36370:intron | 15.0% |
!! | TATTGTTAGAAAACTATTAT+TGG | + | chr2.2:2514161-2514180 | MS.gene36370:intron | 15.0% |
!!! | AAATAAAAGTTTACTTTTAC+AGG | - | chr2.2:2512176-2512195 | None:intergenic | 15.0% |
!!! | AATAAAAGTTTACTTTTACA+GGG | - | chr2.2:2512175-2512194 | None:intergenic | 15.0% |
!!! | ATTTTTTTAATGTATGTGTT+TGG | + | chr2.2:2514217-2514236 | MS.gene36370:intron | 15.0% |
!!! | GTGTATGATTTTTTTTTTTT+TGG | + | chr2.2:2514514-2514533 | MS.gene36370:intron | 15.0% |
!!! | GTTATAATTCACATTTTAAA+GGG | - | chr2.2:2512031-2512050 | None:intergenic | 15.0% |
!!! | TAATCTATGTACTTTAAAAA+TGG | - | chr2.2:2513559-2513578 | None:intergenic | 15.0% |
!!! | TAATTAATAATGGAAAAACA+TGG | - | chr2.2:2511419-2511438 | None:intergenic | 15.0% |
!!! | TTATTTTTATTTTAAGACAG+AGG | + | chr2.2:2511260-2511279 | MS.gene36370:intron | 15.0% |
!! | AAATTCAACATTAATGCTTA+AGG | + | chr2.2:2513456-2513475 | MS.gene36370:intron | 20.0% |
!! | AACACAATTGTATATTTGTA+AGG | - | chr2.2:2512204-2512223 | None:intergenic | 20.0% |
!! | AAGTACAAAAAAGTTCAATT+GGG | + | chr2.2:2513331-2513350 | MS.gene36370:intron | 20.0% |
!! | AATAAAGATCTCATTAGAAT+TGG | - | chr2.2:2512353-2512372 | None:intergenic | 20.0% |
!! | CTAACATATTGTAAATATGT+AGG | + | chr2.2:2512523-2512542 | MS.gene36370:intron | 20.0% |
!! | GGTATATACAGTATAATATA+TGG | + | chr2.2:2513129-2513148 | MS.gene36370:intron | 20.0% |
!! | TAATTGTATTATTGCTAAGA+GGG | - | chr2.2:2514089-2514108 | None:intergenic | 20.0% |
!! | TACAAATATACAATTGTGTT+TGG | + | chr2.2:2512204-2512223 | MS.gene36370:intron | 20.0% |
!! | TTAATTGTATTATTGCTAAG+AGG | - | chr2.2:2514090-2514109 | None:intergenic | 20.0% |
!!! | GAAAGATTTGAAATGTTTAT+GGG | + | chr2.2:2514540-2514559 | MS.gene36370:intron | 20.0% |
!!! | GCATTAGAATAAAATTTGTT+TGG | - | chr2.2:2513495-2513514 | None:intergenic | 20.0% |
!!! | GGTTATAATTCACATTTTAA+AGG | - | chr2.2:2512032-2512051 | None:intergenic | 20.0% |
!!! | TGAAAGATTTGAAATGTTTA+TGG | + | chr2.2:2514539-2514558 | MS.gene36370:intron | 20.0% |
!!! | TTATGGGTTTTGTATAAATA+GGG | + | chr2.2:2514556-2514575 | MS.gene36370:intron | 20.0% |
!!! | TTTATGGGTTTTGTATAAAT+AGG | + | chr2.2:2514555-2514574 | MS.gene36370:intron | 20.0% |
! | AATTGTATTATTGCTAAGAG+GGG | - | chr2.2:2514088-2514107 | None:intergenic | 25.0% |
! | AGGCATGTAGTAATTAATAA+TGG | - | chr2.2:2511429-2511448 | None:intergenic | 25.0% |
! | ATCATGCTTAACTTTGTAAA+TGG | + | chr2.2:2512695-2512714 | MS.gene36370:intron | 25.0% |
! | ATGTACTATAGCATAAGATT+AGG | - | chr2.2:2513797-2513816 | None:intergenic | 25.0% |
! | ATTGACTACAACTATAGTAA+AGG | + | chr2.2:2512881-2512900 | MS.gene36370:CDS | 25.0% |
! | CAAAAATAGTTACTAGTACA+TGG | - | chr2.2:2511539-2511558 | None:intergenic | 25.0% |
! | GAAGTACAAAAAAGTTCAAT+TGG | + | chr2.2:2513330-2513349 | MS.gene36370:intron | 25.0% |
! | GATCCCTCAATATAAAATAA+GGG | - | chr2.2:2512301-2512320 | None:intergenic | 25.0% |
! | GTTAGAAAACTATTATTGGT+AGG | + | chr2.2:2514165-2514184 | MS.gene36370:intron | 25.0% |
! | TAAAAAGTGGTATATTTGCT+TGG | + | chr2.2:2512441-2512460 | MS.gene36370:intron | 25.0% |
! | TACATGCCTTATATAAACAT+TGG | + | chr2.2:2511440-2511459 | MS.gene36370:intron | 25.0% |
! | TATACTGTATATACCTACAT+GGG | - | chr2.2:2513124-2513143 | None:intergenic | 25.0% |
! | TGATCCCTCAATATAAAATA+AGG | - | chr2.2:2512302-2512321 | None:intergenic | 25.0% |
! | TTACTATAGTTGTAGTCAAT+AGG | - | chr2.2:2512881-2512900 | None:intergenic | 25.0% |
! | TTATACTGTATATACCTACA+TGG | - | chr2.2:2513125-2513144 | None:intergenic | 25.0% |
! | TTTGTGCCAATGTTTATATA+AGG | - | chr2.2:2511449-2511468 | None:intergenic | 25.0% |
!! | ATTTTTGTCGAATAATCTAG+TGG | - | chr2.2:2512053-2512072 | None:intergenic | 25.0% |
!! | CTCTGGTTAAGAATTTTAAA+TGG | - | chr2.2:2512099-2512118 | None:intergenic | 25.0% |
!! | TAAAATTCTTATAGAGTGTC+CGG | - | chr2.2:2511905-2511924 | None:intergenic | 25.0% |
!! | TTTGTTTGTTAAGATCAACA+TGG | + | chr2.2:2512904-2512923 | MS.gene36370:CDS | 25.0% |
!!! | AAGCCCTTATTTTATATTGA+GGG | + | chr2.2:2512295-2512314 | MS.gene36370:intron | 25.0% |
!!! | ACATTTTAAAGGGAATAAGT+GGG | - | chr2.2:2512021-2512040 | None:intergenic | 25.0% |
!!! | TAAGCCCTTATTTTATATTG+AGG | + | chr2.2:2512294-2512313 | MS.gene36370:intron | 25.0% |
!!! | TTTCTTTCATTTTGAGAGAT+AGG | + | chr2.2:2513356-2513375 | MS.gene36370:intron | 25.0% |
!!! | TTTTTTTTTCAGTTGGTACT+AGG | + | chr2.2:2514408-2514427 | MS.gene36370:intron | 25.0% |
AAACCCCAAGGAAAAAATAT+AGG | - | chr2.2:2511641-2511660 | None:intergenic | 30.0% | |
AACAAACAAAGACTCTCATT+TGG | + | chr2.2:2511056-2511075 | MS.gene36370:CDS | 30.0% | |
AACACTTGTCATAAATCATG+TGG | - | chr2.2:2513996-2514015 | None:intergenic | 30.0% | |
AATAGGGAAGGAAAACTTTA+CGG | + | chr2.2:2514572-2514591 | MS.gene36370:intron | 30.0% | |
ACTAGTAATTATGAAGCACA+AGG | - | chr2.2:2513944-2513963 | None:intergenic | 30.0% | |
AGAGTATACTCTTGTATATG+AGG | + | chr2.2:2513704-2513723 | MS.gene36370:CDS | 30.0% | |
ATTCAATCATAGTACTCATG+TGG | + | chr2.2:2513057-2513076 | MS.gene36370:intron | 30.0% | |
ATTTGAAGGGTTATGCTAAT+AGG | + | chr2.2:2512582-2512601 | MS.gene36370:intron | 30.0% | |
CAACCACACACAAAATATAT+TGG | + | chr2.2:2511483-2511502 | MS.gene36370:intron | 30.0% | |
CTTGTATATGAGGATAATGA+AGG | + | chr2.2:2513714-2513733 | MS.gene36370:CDS | 30.0% | |
GAAAGTGATTACTGGATTAT+TGG | + | chr2.2:2513671-2513690 | MS.gene36370:CDS | 30.0% | |
GACAAATTCAGATATTCACA+TGG | - | chr2.2:2511678-2511697 | None:intergenic | 30.0% | |
GACAAGATATCTACTTGATT+TGG | + | chr2.2:2514434-2514453 | MS.gene36370:intron | 30.0% | |
GTAGCAAAAACTCAAGATAT+GGG | - | chr2.2:2512145-2512164 | None:intergenic | 30.0% | |
TAAACAGTGAAACTTGTAGT+AGG | - | chr2.2:2512673-2512692 | None:intergenic | 30.0% | |
TACTTCTCTTCTTCAAACAA+TGG | + | chr2.2:2511083-2511102 | MS.gene36370:CDS | 30.0% | |
TGTAGGGTTACTATTTGATT+TGG | + | chr2.2:2512540-2512559 | MS.gene36370:intron | 30.0% | |
TTAAAATCACACTAGTTAGC+AGG | - | chr2.2:2514140-2514159 | None:intergenic | 30.0% | |
TTTACATTTCTTTCCCATGT+AGG | + | chr2.2:2513108-2513127 | MS.gene36370:intron | 30.0% | |
TTTGTTAAGATCAACATGGA+TGG | + | chr2.2:2512908-2512927 | MS.gene36370:CDS | 30.0% | |
! | AAAACCATGCTTTTACTAGT+AGG | - | chr2.2:2513388-2513407 | None:intergenic | 30.0% |
! | AAACCATGCTTTTACTAGTA+GGG | - | chr2.2:2513387-2513406 | None:intergenic | 30.0% |
! | AGATCAACTTTTCTACCAAT+TGG | - | chr2.2:2512938-2512957 | None:intergenic | 30.0% |
! | ATATATTTTGTGTGTGGTTG+AGG | - | chr2.2:2511483-2511502 | None:intergenic | 30.0% |
! | TTGCCAATATATTTTGTGTG+TGG | - | chr2.2:2511489-2511508 | None:intergenic | 30.0% |
!! | ATTTGATTTGGATGAGTGAT+TGG | + | chr2.2:2512552-2512571 | MS.gene36370:intron | 30.0% |
!! | CACATTTTAAAGGGAATAAG+TGG | - | chr2.2:2512022-2512041 | None:intergenic | 30.0% |
!! | TTTACTTTTACAGGGACTAA+AGG | - | chr2.2:2512167-2512186 | None:intergenic | 30.0% |
!!! | ATACCCATTTTTTAATGACG+AGG | - | chr2.2:2511738-2511757 | None:intergenic | 30.0% |
!!! | ATGTGCCTATATTTTTTCCT+TGG | + | chr2.2:2511633-2511652 | MS.gene36370:intron | 30.0% |
!!! | TACCCATTTTTTAATGACGA+GGG | - | chr2.2:2511737-2511756 | None:intergenic | 30.0% |
!!! | TATATTTTTTCCTTGGGGTT+TGG | + | chr2.2:2511640-2511659 | MS.gene36370:intron | 30.0% |
!!! | TGTGCCTATATTTTTTCCTT+GGG | + | chr2.2:2511634-2511653 | MS.gene36370:intron | 30.0% |
!!! | TGTTTTTTCTCCTACTATTG+TGG | + | chr2.2:2511305-2511324 | MS.gene36370:intron | 30.0% |
AAATGAGAGAGAATCTTCTG+AGG | + | chr2.2:2510968-2510987 | MS.gene36370:CDS | 35.0% | |
AAGAGAGTAGAGTTACAGAA+TGG | + | chr2.2:2511161-2511180 | MS.gene36370:CDS | 35.0% | |
AATGAAGATGCTTACTTCCA+TGG | - | chr2.2:2513765-2513784 | None:intergenic | 35.0% | |
AGACATCTCTGAATCAAACA+TGG | - | chr2.2:2511581-2511600 | None:intergenic | 35.0% | |
AGGAAAGAAAGCTTGAACTA+AGG | + | chr2.2:2510988-2511007 | MS.gene36370:CDS | 35.0% | |
ATGAAGATGCTTACTTCCAT+GGG | - | chr2.2:2513764-2513783 | None:intergenic | 35.0% | |
GGTAGCAAAAACTCAAGATA+TGG | - | chr2.2:2512146-2512165 | None:intergenic | 35.0% | |
GTCCCTCGTCATTAAAAAAT+GGG | + | chr2.2:2511732-2511751 | MS.gene36370:intron | 35.0% | |
GTGATTACTGGATTATTGGA+TGG | + | chr2.2:2513675-2513694 | MS.gene36370:CDS | 35.0% | |
TAAAAACATTGACCACACGA+CGG | - | chr2.2:2513084-2513103 | None:intergenic | 35.0% | |
TGAAAATCTTTCTTCAGCTG+TGG | + | chr2.2:2512976-2512995 | MS.gene36370:CDS | 35.0% | |
TGTGTACTCTTGATTTACTG+TGG | + | chr2.2:2514598-2514617 | MS.gene36370:CDS | 35.0% | |
TGTTTGTATCAACAGTGAAG+AGG | + | chr2.2:2514245-2514264 | MS.gene36370:CDS | 35.0% | |
TTCATCAACGTGTTTCGATA+CGG | + | chr2.2:2513176-2513195 | MS.gene36370:intron | 35.0% | |
TTCTGTAACTCTACTCTCTT+AGG | - | chr2.2:2511161-2511180 | None:intergenic | 35.0% | |
TTCTTCCTGAATGAACGAAT+TGG | - | chr2.2:2512770-2512789 | None:intergenic | 35.0% | |
TTGGATGAGTGATTGGATTT+GGG | + | chr2.2:2512559-2512578 | MS.gene36370:intron | 35.0% | |
TTTGGATGAGTGATTGGATT+TGG | + | chr2.2:2512558-2512577 | MS.gene36370:intron | 35.0% | |
! | AATGGTTTTCAACATGTGAG+AGG | + | chr2.2:2511101-2511120 | MS.gene36370:CDS | 35.0% |
! | ATATCATTTGGGTATTGCTC+AGG | + | chr2.2:2511874-2511893 | MS.gene36370:intron | 35.0% |
! | GATTGGATTTGGGATTTGAA+GGG | + | chr2.2:2512569-2512588 | MS.gene36370:intron | 35.0% |
! | TGATTGGATTTGGGATTTGA+AGG | + | chr2.2:2512568-2512587 | MS.gene36370:intron | 35.0% |
!! | CTTTCATTTTGAGAGATAGG+TGG | + | chr2.2:2513359-2513378 | MS.gene36370:intron | 35.0% |
!! | GAAATGAAAGTGCTGTTAAG+TGG | + | chr2.2:2514461-2514480 | MS.gene36370:intron | 35.0% |
!! | GAGTCTTTGTTTGTTGTTGT+TGG | - | chr2.2:2511051-2511070 | None:intergenic | 35.0% |
!! | GGGTTTTGTATAAATAGGGA+AGG | + | chr2.2:2514560-2514579 | MS.gene36370:intron | 35.0% |
!!! | AGCAGTTCTGTTTTTTTGGT+GGG | - | chr2.2:2512723-2512742 | None:intergenic | 35.0% |
!!! | GTGCCTATATTTTTTCCTTG+GGG | + | chr2.2:2511635-2511654 | MS.gene36370:intron | 35.0% |
AAATCACACTAGTTAGCAGG+AGG | - | chr2.2:2514137-2514156 | None:intergenic | 40.0% | |
AACAACAACAATGTTGCTGC+TGG | + | chr2.2:2512848-2512867 | MS.gene36370:CDS | 40.0% | |
AACATGGATGGTGTTCCAAT+TGG | + | chr2.2:2512920-2512939 | MS.gene36370:CDS | 40.0% | |
AAGGGAATAAGTGGGTGATT+AGG | - | chr2.2:2512013-2512032 | None:intergenic | 40.0% | |
ACAAAATGCCACATGAGTGA+TGG | - | chr2.2:2513887-2513906 | None:intergenic | 40.0% | |
ACTAGCTGTATGCTTCAGAT+TGG | + | chr2.2:2513425-2513444 | MS.gene36370:intron | 40.0% | |
ACTGGATTATTGGATGGAAG+TGG | + | chr2.2:2513681-2513700 | MS.gene36370:CDS | 40.0% | |
AGAAAGCTTGAACTAAGGCT+TGG | + | chr2.2:2510993-2511012 | MS.gene36370:CDS | 40.0% | |
AGGGAATAAGTGGGTGATTA+GGG | - | chr2.2:2512012-2512031 | None:intergenic | 40.0% | |
ATGAGGATAATGAAGGAGAC+AGG | + | chr2.2:2513721-2513740 | MS.gene36370:CDS | 40.0% | |
CAAAAAAACAGAACTGCTCC+TGG | + | chr2.2:2512725-2512744 | MS.gene36370:intron | 40.0% | |
GAAACAGAACAGAACTTGCA+TGG | - | chr2.2:2511332-2511351 | None:intergenic | 40.0% | |
GAATCAAACATGGCTAGGAA+AGG | - | chr2.2:2511571-2511590 | None:intergenic | 40.0% | |
GAGGAAGAGAAAGTGATTAC+TGG | + | chr2.2:2513663-2513682 | MS.gene36370:CDS | 40.0% | |
GGTCCCTCGTCATTAAAAAA+TGG | + | chr2.2:2511731-2511750 | MS.gene36370:intron | 40.0% | |
GTACCCTACTAGTAAAAGCA+TGG | + | chr2.2:2513381-2513400 | MS.gene36370:intron | 40.0% | |
GTTTCGATACGGCTAGTATT+TGG | + | chr2.2:2513187-2513206 | MS.gene36370:intron | 40.0% | |
TCTCTGAATCAAACATGGCT+AGG | - | chr2.2:2511576-2511595 | None:intergenic | 40.0% | |
TGGTGGTAACAAGAAAGAAG+AGG | + | chr2.2:2513644-2513663 | MS.gene36370:CDS | 40.0% | |
TTCCAATTCCATCACTCATG+TGG | + | chr2.2:2513876-2513895 | MS.gene36370:intron | 40.0% | |
TTCCTGAATGAACGAATTGG+TGG | - | chr2.2:2512767-2512786 | None:intergenic | 40.0% | |
TTTCCAACACCTCTCAGAAA+AGG | + | chr2.2:2511207-2511226 | MS.gene36370:CDS | 40.0% | |
! | CTCTTTAGAGGACTCCTTAA+AGG | + | chr2.2:2513004-2513023 | MS.gene36370:CDS | 40.0% |
! | GGTATAGTACCTTTTCTGAG+AGG | - | chr2.2:2511219-2511238 | None:intergenic | 40.0% |
! | TTTTTAATGACGAGGGACCA+AGG | - | chr2.2:2511730-2511749 | None:intergenic | 40.0% |
!! | TAGGGTTAGTTATGATCACG+AGG | - | chr2.2:2511994-2512013 | None:intergenic | 40.0% |
!!! | CAGGAGCAGTTCTGTTTTTT+TGG | - | chr2.2:2512727-2512746 | None:intergenic | 40.0% |
!!! | GAGCAGTTCTGTTTTTTTGG+TGG | - | chr2.2:2512724-2512743 | None:intergenic | 40.0% |
!!! | GCAGTTCTGTTTTTTTGGTG+GGG | - | chr2.2:2512722-2512741 | None:intergenic | 40.0% |
AAATTCTTAACCAGAGCGCG+AGG | + | chr2.2:2512103-2512122 | MS.gene36370:intron | 45.0% | |
AACCAGTCTTCTTCAACACC+AGG | - | chr2.2:2511023-2511042 | None:intergenic | 45.0% | |
AATTCTTAACCAGAGCGCGA+GGG | + | chr2.2:2512104-2512123 | MS.gene36370:intron | 45.0% | |
ATCTGTAGCACTACATGCCA+TGG | + | chr2.2:2514024-2514043 | MS.gene36370:intron | 45.0% | |
CTCTACTCTCTTAGGACAAC+AGG | - | chr2.2:2511153-2511172 | None:intergenic | 45.0% | |
CTTGCATGGACCACAATAGT+AGG | - | chr2.2:2511318-2511337 | None:intergenic | 45.0% | |
GTATGTCAAACCAAACCCCA+AGG | - | chr2.2:2511653-2511672 | None:intergenic | 45.0% | |
TGTGACAAACAGACATGCCA+TGG | - | chr2.2:2514044-2514063 | None:intergenic | 45.0% | |
TTATTGCTAAGAGGGGACAG+TGG | - | chr2.2:2514081-2514100 | None:intergenic | 45.0% | |
! | GTCTGAGATTCTGGTTGTGA+TGG | - | chr2.2:2512818-2512837 | None:intergenic | 45.0% |
! | TGCCACATGAGTGATGGAAT+TGG | - | chr2.2:2513881-2513900 | None:intergenic | 45.0% |
! | TGCTGTTGAGTCTGAGATTC+TGG | - | chr2.2:2512827-2512846 | None:intergenic | 45.0% |
!! | CTGCTTTTACACGTGAGTCA+TGG | + | chr2.2:2514296-2514315 | MS.gene36370:intron | 45.0% |
!! | GTACCTTTTCTGAGAGGTGT+TGG | - | chr2.2:2511213-2511232 | None:intergenic | 45.0% |
!! | ATATATATATATATATCATT+TGG | + | chr2.2:2511862-2511881 | MS.gene36370:intron | 5.0% |
!! | TATATATATATATATCATTT+GGG | + | chr2.2:2511863-2511882 | MS.gene36370:intron | 5.0% |
!! | TGTTAATATTATTTAATTAA+AGG | + | chr2.2:2513967-2513986 | MS.gene36370:intron | 5.0% |
!!! | TTGTTTTTTAATAAATTTTT+TGG | + | chr2.2:2511773-2511792 | MS.gene36370:intron | 5.0% |
CAACGAGATTCCTCTGCTTG+TGG | + | chr2.2:2513624-2513643 | MS.gene36370:CDS | 50.0% | |
CAGTCTTCTTCAACACCAGG+TGG | - | chr2.2:2511020-2511039 | None:intergenic | 50.0% | |
CTTGTTACCACCACAAGCAG+AGG | - | chr2.2:2513637-2513656 | None:intergenic | 50.0% | |
GAAGGAGACAGGATGCTTGT+TGG | + | chr2.2:2513732-2513751 | MS.gene36370:CDS | 50.0% | |
GCTGTGGATGAGCTCTTTAG+AGG | + | chr2.2:2512992-2513011 | MS.gene36370:CDS | 50.0% | |
GGCCACCAATTCGTTCATTC+AGG | + | chr2.2:2512762-2512781 | MS.gene36370:CDS | 50.0% | |
! | CACCTGGTGTTGAAGAAGAC+TGG | + | chr2.2:2511018-2511037 | MS.gene36370:CDS | 50.0% |
!! | GGGTATTGCTCAGGAGTATC+CGG | + | chr2.2:2511883-2511902 | MS.gene36370:intron | 50.0% |
!! | TGCTTGTTGGTGATGTCCCA+TGG | + | chr2.2:2513745-2513764 | MS.gene36370:CDS | 50.0% |
AACTGCTCCTGGACCAGTAG+TGG | + | chr2.2:2512736-2512755 | MS.gene36370:CDS | 55.0% | |
ACTGCTCCTGGACCAGTAGT+GGG | + | chr2.2:2512737-2512756 | MS.gene36370:CDS | 55.0% | |
CGAGATTCCTCTGCTTGTGG+TGG | + | chr2.2:2513627-2513646 | MS.gene36370:CDS | 55.0% | |
TACTCATGTGGACCGTCGTG+TGG | + | chr2.2:2513069-2513088 | MS.gene36370:intron | 55.0% | |
! | ATTGGTGGCCAACCCACTAC+TGG | - | chr2.2:2512752-2512771 | None:intergenic | 55.0% |
! | GAACTAAGGCTTGGTCCACC+TGG | + | chr2.2:2511002-2511021 | MS.gene36370:CDS | 55.0% |
TAATTACCGCCCTCGCGCTC+TGG | - | chr2.2:2512116-2512135 | None:intergenic | 60.0% | |
TCTTAACCAGAGCGCGAGGG+CGG | + | chr2.2:2512107-2512126 | MS.gene36370:intron | 60.0% | |
!! | CTCCTGGACCAGTAGTGGGT+TGG | + | chr2.2:2512741-2512760 | MS.gene36370:CDS | 60.0% |
GGCCAACCCACTACTGGTCC+AGG | - | chr2.2:2512746-2512765 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 2510951 | 2514632 | 2510951 | ID=MS.gene36370 |
chr2.2 | mRNA | 2510951 | 2514632 | 2510951 | ID=MS.gene36370.t1;Parent=MS.gene36370 |
chr2.2 | exon | 2510951 | 2511228 | 2510951 | ID=MS.gene36370.t1.exon1;Parent=MS.gene36370.t1 |
chr2.2 | CDS | 2510951 | 2511228 | 2510951 | ID=cds.MS.gene36370.t1;Parent=MS.gene36370.t1 |
chr2.2 | exon | 2512736 | 2513025 | 2512736 | ID=MS.gene36370.t1.exon2;Parent=MS.gene36370.t1 |
chr2.2 | CDS | 2512736 | 2513025 | 2512736 | ID=cds.MS.gene36370.t1;Parent=MS.gene36370.t1 |
chr2.2 | exon | 2513622 | 2513769 | 2513622 | ID=MS.gene36370.t1.exon3;Parent=MS.gene36370.t1 |
chr2.2 | CDS | 2513622 | 2513769 | 2513622 | ID=cds.MS.gene36370.t1;Parent=MS.gene36370.t1 |
chr2.2 | exon | 2514243 | 2514307 | 2514243 | ID=MS.gene36370.t1.exon4;Parent=MS.gene36370.t1 |
chr2.2 | CDS | 2514243 | 2514307 | 2514243 | ID=cds.MS.gene36370.t1;Parent=MS.gene36370.t1 |
chr2.2 | exon | 2514577 | 2514632 | 2514577 | ID=MS.gene36370.t1.exon5;Parent=MS.gene36370.t1 |
chr2.2 | CDS | 2514577 | 2514632 | 2514577 | ID=cds.MS.gene36370.t1;Parent=MS.gene36370.t1 |
Gene Sequence |
Protein sequence |