Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36877.t1 | XP_013444928.1 | 95.5 | 445 | 19 | 1 | 1 | 444 | 1 | 445 | 7.00E-236 | 826.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36877.t1 | P45432 | 73.7 | 445 | 112 | 3 | 1 | 444 | 1 | 441 | 9.8e-186 | 651.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36877.t1 | A0A072TQ51 | 95.5 | 445 | 19 | 1 | 1 | 444 | 1 | 445 | 5.1e-236 | 826.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene36877 | 0.827846 | 1.25E-54 | -1.69E-46 |
| MS.gene049254 | MS.gene36877 | 0.810862 | 9.33E-51 | -1.69E-46 |
| MS.gene049283 | MS.gene36877 | 0.804743 | 1.87E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene36877 | 0.833907 | 4.07E-56 | -1.69E-46 |
| MS.gene050654 | MS.gene36877 | 0.808051 | 3.74E-50 | -1.69E-46 |
| MS.gene050759 | MS.gene36877 | 0.813032 | 3.14E-51 | -1.69E-46 |
| MS.gene050941 | MS.gene36877 | 0.801803 | 7.58E-49 | -1.69E-46 |
| MS.gene050962 | MS.gene36877 | 0.80174 | 7.81E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene36877 | 0.80371 | 3.06E-49 | -1.69E-46 |
| MS.gene051490 | MS.gene36877 | 0.805045 | 1.61E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene36877 | 0.804042 | 2.61E-49 | -1.69E-46 |
| MS.gene052037 | MS.gene36877 | 0.806171 | 9.36E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene36877 | 0.803172 | 3.96E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene36877 | 0.810692 | 1.02E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene36877 | 0.822901 | 1.85E-53 | -1.69E-46 |
| MS.gene052776 | MS.gene36877 | 0.801856 | 7.39E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene36877 | 0.831055 | 2.07E-55 | -1.69E-46 |
| MS.gene05458 | MS.gene36877 | 0.80001 | 1.76E-48 | -1.69E-46 |
| MS.gene054651 | MS.gene36877 | 0.804109 | 2.53E-49 | -1.69E-46 |
| MS.gene055313 | MS.gene36877 | 0.80269 | 4.98E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene36877 | 0.805621 | 1.22E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene36877 | 0.810634 | 1.05E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene36877 | 0.803484 | 3.41E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene36877 | 0.8483 | 6.69E-60 | -1.69E-46 |
| MS.gene056831 | MS.gene36877 | 0.80667 | 7.35E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene36877 | 0.80532 | 1.41E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene36877 | 0.812679 | 3.75E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene36877 | 0.814556 | 1.45E-51 | -1.69E-46 |
| MS.gene057855 | MS.gene36877 | 0.801631 | 8.22E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene36877 | 0.802509 | 5.43E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene36877 | 0.80905 | 2.29E-50 | -1.69E-46 |
| MS.gene058289 | MS.gene36877 | 0.802981 | 4.33E-49 | -1.69E-46 |
| MS.gene05847 | MS.gene36877 | 0.807153 | 5.81E-50 | -1.69E-46 |
| MS.gene059283 | MS.gene36877 | 0.800889 | 1.17E-48 | -1.69E-46 |
| MS.gene059439 | MS.gene36877 | 0.804777 | 1.84E-49 | -1.69E-46 |
| MS.gene060777 | MS.gene36877 | 0.841354 | 5.00E-58 | -1.69E-46 |
| MS.gene060932 | MS.gene36877 | 0.834845 | 2.37E-56 | -1.69E-46 |
| MS.gene060933 | MS.gene36877 | 0.814884 | 1.23E-51 | -1.69E-46 |
| MS.gene060935 | MS.gene36877 | 0.810984 | 8.78E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene36877 | 0.817088 | 3.95E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene52605 | MS.gene36877 | PPI |
| MS.gene033505 | MS.gene36877 | PPI |
| MS.gene024064 | MS.gene36877 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36877.t1 | MTR_8g432630 | 95.506 | 445 | 19 | 1 | 1 | 444 | 1 | 445 | 0.0 | 870 |
| MS.gene36877.t1 | MTR_7g076160 | 70.852 | 446 | 125 | 4 | 1 | 444 | 1 | 443 | 0.0 | 622 |
| MS.gene36877.t1 | MTR_6g025300 | 38.402 | 388 | 165 | 8 | 40 | 359 | 211 | 592 | 7.54e-68 | 230 |
| MS.gene36877.t1 | MTR_4g104080 | 22.756 | 312 | 238 | 3 | 105 | 415 | 62 | 371 | 9.94e-18 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36877.t1 | AT3G61140 | 73.708 | 445 | 112 | 3 | 1 | 444 | 1 | 441 | 0.0 | 683 |
| MS.gene36877.t1 | AT4G24820 | 25.381 | 197 | 145 | 2 | 219 | 415 | 177 | 371 | 2.71e-15 | 77.8 |
| MS.gene36877.t1 | AT4G24820 | 25.381 | 197 | 145 | 2 | 219 | 415 | 177 | 371 | 2.71e-15 | 77.8 |
Find 109 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAATGGGATACAATGATTT+TGG | 0.151930 | 8.4:+63946379 | MS.gene36877:CDS |
| CCAGCGACAGATTTGATTTC+AGG | 0.161626 | 8.4:-63947852 | None:intergenic |
| TTAAACATGACTTCAATATT+AGG | 0.175164 | 8.4:+63948426 | MS.gene36877:CDS |
| GAGAGAATACGCAGTTGTTT+AGG | 0.234580 | 8.4:+63944510 | MS.gene36877:CDS |
| AGCTGCAATTACTTCATTAT+AGG | 0.247402 | 8.4:-63946890 | None:intergenic |
| ATTTGATAGGGCAGAGTTAA+AGG | 0.247989 | 8.4:+63946954 | MS.gene36877:CDS |
| GAGGGGTATGAGATGGATTT+GGG | 0.259340 | 8.4:+63944566 | MS.gene36877:CDS |
| TGAGGGGTATGAGATGGATT+TGG | 0.292623 | 8.4:+63944565 | MS.gene36877:CDS |
| TGGATTTGGGTTGGTGTGAT+GGG | 0.299034 | 8.4:+63944579 | MS.gene36877:CDS |
| TAAACATGACTTCAATATTA+GGG | 0.299578 | 8.4:+63948427 | MS.gene36877:CDS |
| GTGCACTTGCAACATTTGAT+AGG | 0.300346 | 8.4:+63946941 | MS.gene36877:CDS |
| AGAGAATACGCAGTTGTTTA+GGG | 0.301080 | 8.4:+63944511 | MS.gene36877:CDS |
| TTTCAAAGGGTTCTAGAAAC+TGG | 0.314327 | 8.4:+63948353 | MS.gene36877:CDS |
| TTATAGGTACTACCCAGTTC+TGG | 0.318469 | 8.4:-63946874 | None:intergenic |
| AGAATGAGCTTAATGCTTAT+AGG | 0.336138 | 8.4:+63944639 | MS.gene36877:CDS |
| ATGGATTTGGGTTGGTGTGA+TGG | 0.340791 | 8.4:+63944578 | MS.gene36877:CDS |
| CGTAGCTTGGAAATTATTAT+CGG | 0.348012 | 8.4:-63946595 | None:intergenic |
| TTTATCAGTTCCCTTACTTC+GGG | 0.364996 | 8.4:-63947116 | None:intergenic |
| GAATGAGCTTAATGCTTATA+GGG | 0.369021 | 8.4:+63944640 | MS.gene36877:CDS |
| TCTAGAAGCAGGCCCAGAAC+TGG | 0.386575 | 8.4:+63946861 | MS.gene36877:CDS |
| CAGCCACTACGCTTCCTGTC+TGG | 0.396775 | 8.4:+63947816 | MS.gene36877:intron |
| ATACAAGTGGGAGTGTATAC+TGG | 0.401558 | 8.4:-63947936 | None:intergenic |
| GCTCAAGATGTTGCAACATA+TGG | 0.403151 | 8.4:+63946910 | MS.gene36877:CDS |
| GTGGGAGTGTATACTGGATA+AGG | 0.420742 | 8.4:-63947930 | None:intergenic |
| TAGAGTTGGTACCCGAAGTA+AGG | 0.420745 | 8.4:+63947105 | MS.gene36877:CDS |
| TACTATTCTCATGGTCTACA+AGG | 0.422311 | 8.4:+63946409 | MS.gene36877:CDS |
| GCATTCAAGACAACTGTTGT+TGG | 0.425392 | 8.4:+63947985 | MS.gene36877:CDS |
| CTCTAAGAAATTGCAGAAGT+TGG | 0.425488 | 8.4:-63947087 | None:intergenic |
| GCAGCTCGACGCGCTTCGAT+TGG | 0.432070 | 8.4:+63944466 | MS.gene36877:CDS |
| GTGTAGATTTCGTCGAGCAT+TGG | 0.438562 | 8.4:-63944290 | None:intergenic |
| ATTTATCAGTTCCCTTACTT+CGG | 0.447966 | 8.4:-63947117 | None:intergenic |
| TGTAGATTTCGTCGAGCATT+GGG | 0.448276 | 8.4:-63944289 | None:intergenic |
| GATTGATGGGAGGTTGGGTG+AGG | 0.449464 | 8.4:+63944547 | MS.gene36877:CDS |
| TTATTGCAGTTTCTAGAAGC+AGG | 0.451611 | 8.4:+63946850 | MS.gene36877:intron |
| GCTACGATGTGCGGCAGGAT+TGG | 0.460867 | 8.4:+63946612 | MS.gene36877:CDS |
| ATCTGTTGATTTGAATATGA+TGG | 0.461634 | 8.4:+63947957 | MS.gene36877:CDS |
| TATAGGTACTACCCAGTTCT+GGG | 0.466137 | 8.4:-63946873 | None:intergenic |
| TTCGTCGAGCATTGGGTTTG+AGG | 0.471588 | 8.4:-63944282 | None:intergenic |
| CTTCTGCAATTTCTTAGAGT+TGG | 0.471724 | 8.4:+63947091 | MS.gene36877:CDS |
| GGATTTGGGTTGGTGTGATG+GGG | 0.475054 | 8.4:+63944580 | MS.gene36877:CDS |
| CTATGTTAACAAGGCAGAGC+AGG | 0.479258 | 8.4:+63946555 | MS.gene36877:CDS |
| GCTTATGATGAGATTAAGAA+AGG | 0.480124 | 8.4:+63944488 | MS.gene36877:CDS |
| GAAGTTGTGATGAAGATTGA+TGG | 0.481600 | 8.4:+63944533 | MS.gene36877:CDS |
| ACGGTTGGTACGGCTGTTGT+CGG | 0.491001 | 8.4:-63944327 | None:intergenic |
| GTTGGTGTGATGGGGTTGAG+AGG | 0.492699 | 8.4:+63944588 | MS.gene36877:CDS |
| TCCTGCCGCACATCGTAGCT+TGG | 0.495648 | 8.4:-63946608 | None:intergenic |
| TCCAAGCTACGATGTGCGGC+AGG | 0.498605 | 8.4:+63946607 | MS.gene36877:CDS |
| GATTACTGATAATCAAATAC+AGG | 0.501737 | 8.4:+63948032 | MS.gene36877:CDS |
| CTTCCTGTCTGGAATACCTT+GGG | 0.503501 | 8.4:+63947827 | MS.gene36877:CDS |
| GATGAAGATTGATGGGAGGT+TGG | 0.508290 | 8.4:+63944541 | MS.gene36877:CDS |
| AAGGAATGACACCTTTCAAA+GGG | 0.508677 | 8.4:+63948340 | MS.gene36877:CDS |
| ATGAAGATTGATGGGAGGTT+GGG | 0.508768 | 8.4:+63944542 | MS.gene36877:CDS |
| TTGATGGGAGGTTGGGTGAG+GGG | 0.509103 | 8.4:+63944549 | MS.gene36877:CDS |
| GTTGTCGGCGTCGCCGCCGT+TGG | 0.509524 | 8.4:-63944312 | None:intergenic |
| GTTGGGTGAGGGGTATGAGA+TGG | 0.516428 | 8.4:+63944559 | MS.gene36877:CDS |
| TTCAAATCAACAGATACAAG+TGG | 0.517335 | 8.4:-63947949 | None:intergenic |
| TGCACTTGCAACATTTGATA+GGG | 0.517580 | 8.4:+63946942 | MS.gene36877:CDS |
| TGGAAATTATTATCGGGTCA+AGG | 0.518981 | 8.4:-63946588 | None:intergenic |
| ATTAAAGAAAGCATACGAAT+GGG | 0.521524 | 8.4:+63946364 | MS.gene36877:CDS |
| ATTGATGGGAGGTTGGGTGA+GGG | 0.521930 | 8.4:+63944548 | MS.gene36877:CDS |
| TGGGAGTGTATACTGGATAA+GGG | 0.522203 | 8.4:-63947929 | None:intergenic |
| CCTGAAATCAAATCTGTCGC+TGG | 0.526883 | 8.4:+63947852 | MS.gene36877:CDS |
| AAAGGAATGACACCTTTCAA+AGG | 0.526964 | 8.4:+63948339 | MS.gene36877:CDS |
| TGATGGGGTTGAGAGGAAGA+TGG | 0.528170 | 8.4:+63944595 | MS.gene36877:CDS |
| AATTCTAGTCAGCATTGAGA+TGG | 0.528374 | 8.4:+63946510 | MS.gene36877:CDS |
| GTATAAGCTTGCTGCTCGAA+AGG | 0.538438 | 8.4:+63946654 | MS.gene36877:CDS |
| GATTAAAGAAAGCATACGAA+TGG | 0.542641 | 8.4:+63946363 | MS.gene36877:CDS |
| CTAGAAGCAGGCCCAGAACT+GGG | 0.542861 | 8.4:+63946862 | MS.gene36877:CDS |
| GGTATGAGATGGATTTGGGT+TGG | 0.544573 | 8.4:+63944570 | MS.gene36877:CDS |
| AAAGGGTTCTAGAAACTGGA+AGG | 0.545587 | 8.4:+63948357 | MS.gene36877:CDS |
| GCTCATGATTGCGCGACGGT+TGG | 0.551499 | 8.4:-63944342 | None:intergenic |
| GTAGCTTGGAAATTATTATC+GGG | 0.552194 | 8.4:-63946594 | None:intergenic |
| GGAAATTATTATCGGGTCAA+GGG | 0.556947 | 8.4:-63946587 | None:intergenic |
| TTAAAAGTTATGTTCGTACC+CGG | 0.559675 | 8.4:+63946440 | MS.gene36877:CDS |
| GTTCCCAAGGTATTCCAGAC+AGG | 0.563223 | 8.4:-63947830 | None:intergenic |
| ACTTCAATATTAGGGCATCA+AGG | 0.566142 | 8.4:+63948435 | MS.gene36877:CDS |
| TGATTGCGCGACGGTTGGTA+CGG | 0.568292 | 8.4:-63944337 | None:intergenic |
| ACTATTCTCATGGTCTACAA+GGG | 0.570467 | 8.4:+63946410 | MS.gene36877:CDS |
| TGATGTGGTGCAATAATCCC+GGG | 0.574354 | 8.4:-63946458 | None:intergenic |
| GCTTCCTGTCTGGAATACCT+TGG | 0.574937 | 8.4:+63947826 | MS.gene36877:CDS |
| GATTTGATTTCAGGTTCCCA+AGG | 0.575211 | 8.4:-63947843 | None:intergenic |
| AGTTTCTAGAACCCTTTGAA+AGG | 0.575656 | 8.4:-63948351 | None:intergenic |
| TTGATGTGGTGCAATAATCC+CGG | 0.579808 | 8.4:-63946459 | None:intergenic |
| GCTTACTCCTCTCTCTACTC+AGG | 0.588216 | 8.4:+63944386 | MS.gene36877:CDS |
| CAAGATGTTGCAACATATGG+AGG | 0.589980 | 8.4:+63946913 | MS.gene36877:CDS |
| AGATGGAGCAGAAGAAAGAG+AGG | 0.591119 | 8.4:+63944612 | MS.gene36877:CDS |
| AGAGTTGGTACCCGAAGTAA+GGG | 0.593120 | 8.4:+63947106 | MS.gene36877:CDS |
| AAGATTTGATCTCAGCAACA+TGG | 0.593736 | 8.4:-63948402 | None:intergenic |
| ATTCTAGTCAGCATTGAGAT+GGG | 0.597136 | 8.4:+63946511 | MS.gene36877:CDS |
| AGTAAGCTTCGATGTCGAGT+TGG | 0.597545 | 8.4:-63944370 | None:intergenic |
| TAAAAGTTATGTTCGTACCC+GGG | 0.599599 | 8.4:+63946441 | MS.gene36877:CDS |
| CTATTCTCATGGTCTACAAG+GGG | 0.607573 | 8.4:+63946411 | MS.gene36877:CDS |
| ATGCACGACATGCAGATCAA+AGG | 0.613681 | 8.4:+63948321 | MS.gene36877:CDS |
| TGTTCGACCTGAGTAGAGAG+AGG | 0.615845 | 8.4:-63944393 | None:intergenic |
| AAGTTGTGATGAAGATTGAT+GGG | 0.618821 | 8.4:+63944534 | MS.gene36877:CDS |
| TGTCTCAAGCTATGTTAACA+AGG | 0.619773 | 8.4:+63946546 | MS.gene36877:CDS |
| AATTTCCAAGCTACGATGTG+CGG | 0.625300 | 8.4:+63946603 | MS.gene36877:CDS |
| TCAAATCAACAGATACAAGT+GGG | 0.635272 | 8.4:-63947948 | None:intergenic |
| CACCGCTCATGATTGCGCGA+CGG | 0.635966 | 8.4:-63944346 | None:intergenic |
| AACCGTCGCGCAATCATGAG+CGG | 0.641180 | 8.4:+63944344 | MS.gene36877:CDS |
| TTGTGATGAAGATTGATGGG+AGG | 0.641300 | 8.4:+63944537 | MS.gene36877:CDS |
| GAAGAAGAGCAAGAACGCTA+CGG | 0.644102 | 8.4:+63944442 | MS.gene36877:CDS |
| CTCGACGAAATCTACACCAA+CGG | 0.649035 | 8.4:+63944296 | MS.gene36877:CDS |
| ATGAATTATATGCATTGATG+TGG | 0.652085 | 8.4:-63946473 | None:intergenic |
| AAGGGTTCTAGAAACTGGAA+GGG | 0.656638 | 8.4:+63948358 | MS.gene36877:CDS |
| GATCGTAAAGTGTCTCAACA+TGG | 0.668297 | 8.4:-63947891 | None:intergenic |
| CAGGTCGAACAAAGATCATG+CGG | 0.684498 | 8.4:+63944405 | MS.gene36877:CDS |
| ATTCCAGACAGGAAGCGTAG+TGG | 0.689208 | 8.4:-63947819 | None:intergenic |
| GACGAAATCTACACCAACGG+CGG | 0.698207 | 8.4:+63944299 | MS.gene36877:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAGAAAAAATATATATTTG+TGG | + | chr8.4:63947209-63947228 | MS.gene36877:intron | 10.0% |
| !! | AAAAATAAAAGAAATCTTGA+AGG | - | chr8.4:63946327-63946346 | None:intergenic | 15.0% |
| !! | AACTTTCTTATTATTGTTTA+GGG | + | chr8.4:63944990-63945009 | MS.gene36877:intron | 15.0% |
| !! | AATAGTTTGAATAAACAAAT+TGG | - | chr8.4:63945728-63945747 | None:intergenic | 15.0% |
| !! | ATAGTTTGAATAAACAAATT+GGG | - | chr8.4:63945727-63945746 | None:intergenic | 15.0% |
| !! | TAGACTTAATTGATATTTAT+GGG | + | chr8.4:63947568-63947587 | MS.gene36877:intron | 15.0% |
| !! | TTAGACTTAATTGATATTTA+TGG | + | chr8.4:63947567-63947586 | MS.gene36877:intron | 15.0% |
| !!! | TATAAATTGTTAATTTGATG+AGG | + | chr8.4:63945587-63945606 | MS.gene36877:intron | 15.0% |
| !!! | TTTATTCAAACTATTTTGTA+AGG | + | chr8.4:63945733-63945752 | MS.gene36877:intron | 15.0% |
| !! | AAATTAAAACATTTCAAACC+TGG | + | chr8.4:63947632-63947651 | MS.gene36877:intron | 20.0% |
| !! | AATCAACAAAACAAATGTTA+TGG | - | chr8.4:63945808-63945827 | None:intergenic | 20.0% |
| !! | AGACTTAATTGATATTTATG+GGG | + | chr8.4:63947569-63947588 | MS.gene36877:intron | 20.0% |
| !! | ATAAACACTTCAAATTGTTT+CGG | + | chr8.4:63945121-63945140 | MS.gene36877:intron | 20.0% |
| !! | CATAATTTAATTAAGGTAGA+TGG | - | chr8.4:63946277-63946296 | None:intergenic | 20.0% |
| !! | CATCTACCTTAATTAAATTA+TGG | + | chr8.4:63946275-63946294 | MS.gene36877:intron | 20.0% |
| !! | GAACTTTCTTATTATTGTTT+AGG | + | chr8.4:63944989-63945008 | MS.gene36877:intron | 20.0% |
| !! | GATCTATGAAATATTCTATT+TGG | + | chr8.4:63946741-63946760 | MS.gene36877:intron | 20.0% |
| !! | TAAACATGACTTCAATATTA+GGG | + | chr8.4:63948427-63948446 | MS.gene36877:CDS | 20.0% |
| !! | TAATTGTCATGAAAATACAA+TGG | - | chr8.4:63946988-63947007 | None:intergenic | 20.0% |
| !! | TGAAAATAGTTTATAACCTA+TGG | + | chr8.4:63944834-63944853 | MS.gene36877:intron | 20.0% |
| !! | TTAAACATGACTTCAATATT+AGG | + | chr8.4:63948426-63948445 | MS.gene36877:CDS | 20.0% |
| !!! | AACAGTCAAGTTTATTTTTT+GGG | + | chr8.4:63945393-63945412 | MS.gene36877:intron | 20.0% |
| !!! | AATTAAGTTGTATCCAAATA+GGG | + | chr8.4:63945325-63945344 | MS.gene36877:intron | 20.0% |
| !!! | AATTTGGAATCATCTTATAT+TGG | + | chr8.4:63946134-63946153 | MS.gene36877:intron | 20.0% |
| !!! | ATTTTCTCTTTTCATCATTT+TGG | + | chr8.4:63944665-63944684 | MS.gene36877:intron | 20.0% |
| !!! | TAATTAAGTTGTATCCAAAT+AGG | + | chr8.4:63945324-63945343 | MS.gene36877:intron | 20.0% |
| !!! | TATTTTCATAAGCAATCTAA+TGG | - | chr8.4:63944822-63944841 | None:intergenic | 20.0% |
| !!! | TGTATATAATACACTAGTTT+AGG | + | chr8.4:63947289-63947308 | MS.gene36877:intron | 20.0% |
| !!! | TGTTTAACTTGTTTTAGTAT+AGG | + | chr8.4:63945513-63945532 | MS.gene36877:intron | 20.0% |
| !!! | TTCAATTTTTGTATTGCTAT+TGG | + | chr8.4:63945765-63945784 | MS.gene36877:intron | 20.0% |
| !!! | TTGATTGAATTTTGTTGAAT+CGG | + | chr8.4:63947658-63947677 | MS.gene36877:intron | 20.0% |
| !!! | TTTTCTCTTTTCATCATTTT+GGG | + | chr8.4:63944666-63944685 | MS.gene36877:intron | 20.0% |
| ! | ACAAAATTCAATCAAATTCC+AGG | - | chr8.4:63947653-63947672 | None:intergenic | 25.0% |
| ! | ACCTATTAACTTCATTTCTT+TGG | + | chr8.4:63946809-63946828 | MS.gene36877:intron | 25.0% |
| ! | CAATTTATAGTAACTCAAAC+CGG | - | chr8.4:63948059-63948078 | None:intergenic | 25.0% |
| ! | GAAATGAATTAGGTTATGAT+TGG | + | chr8.4:63944776-63944795 | MS.gene36877:intron | 25.0% |
| ! | GATTACTGATAATCAAATAC+AGG | + | chr8.4:63948032-63948051 | MS.gene36877:CDS | 25.0% |
| ! | TACATGTGATTATGGTAATT+AGG | + | chr8.4:63947250-63947269 | MS.gene36877:intron | 25.0% |
| ! | TATCAACTGTTAACTAGTAT+AGG | + | chr8.4:63945555-63945574 | MS.gene36877:intron | 25.0% |
| ! | TCAAACTACTGGATTATTAA+GGG | + | chr8.4:63946708-63946727 | MS.gene36877:intron | 25.0% |
| ! | TCGATTAAACTTTGTTAGTT+TGG | + | chr8.4:63945418-63945437 | MS.gene36877:intron | 25.0% |
| ! | TCTGTTTGTATTGAATTGAA+TGG | + | chr8.4:63945840-63945859 | MS.gene36877:intron | 25.0% |
| ! | TTAATTAAGGTAGATGGAAA+AGG | - | chr8.4:63946271-63946290 | None:intergenic | 25.0% |
| ! | TTTCAACATGAAATGAATCA+GGG | + | chr8.4:63945069-63945088 | MS.gene36877:intron | 25.0% |
| !! | AATATTCTATTTGGAGTTTG+AGG | + | chr8.4:63946750-63946769 | MS.gene36877:intron | 25.0% |
| !! | AATTTTGTTGAATCGGTAAT+TGG | + | chr8.4:63947665-63947684 | MS.gene36877:intron | 25.0% |
| !! | ATGAATTATATGCATTGATG+TGG | - | chr8.4:63946476-63946495 | None:intergenic | 25.0% |
| !! | ATTAAAGAAAGCATACGAAT+GGG | + | chr8.4:63946364-63946383 | MS.gene36877:CDS | 25.0% |
| !! | ATTTCTTTTCTTACTTAACG+TGG | + | chr8.4:63947337-63947356 | MS.gene36877:intron | 25.0% |
| !! | GAATAAACAAATTGGGATTT+TGG | - | chr8.4:63945720-63945739 | None:intergenic | 25.0% |
| !! | GTCTCTTTTACTATAAAAGA+AGG | + | chr8.4:63948207-63948226 | MS.gene36877:intron | 25.0% |
| !! | TAATTTTCTATAACATAGCC+TGG | - | chr8.4:63948104-63948123 | None:intergenic | 25.0% |
| !! | TATCTTTTGTCGTGTATAAT+AGG | + | chr8.4:63944878-63944897 | MS.gene36877:intron | 25.0% |
| !! | TGATAAATGACTTTTACTCA+AGG | + | chr8.4:63947132-63947151 | MS.gene36877:CDS | 25.0% |
| !! | TTTTCAACATGAAATGAATC+AGG | + | chr8.4:63945068-63945087 | MS.gene36877:intron | 25.0% |
| !!! | ATCTGTTGATTTGAATATGA+TGG | + | chr8.4:63947957-63947976 | MS.gene36877:CDS | 25.0% |
| !!! | ATTTGTTTTGTTGATTCTTC+TGG | + | chr8.4:63945812-63945831 | MS.gene36877:intron | 25.0% |
| !!! | ATTTTTGTATTGCTATTGGA+TGG | + | chr8.4:63945769-63945788 | MS.gene36877:intron | 25.0% |
| !!! | GAACAGTCAAGTTTATTTTT+TGG | + | chr8.4:63945392-63945411 | MS.gene36877:intron | 25.0% |
| !!! | GGTTTTTGTTGTTATTGTTT+AGG | + | chr8.4:63944687-63944706 | MS.gene36877:intron | 25.0% |
| !!! | GTCTTCATGATTTTATTTCT+TGG | + | chr8.4:63947042-63947061 | MS.gene36877:intron | 25.0% |
| !!! | TGATTGGATTGACTTATTTT+AGG | + | chr8.4:63944792-63944811 | MS.gene36877:intron | 25.0% |
| AAGTTGTGATGAAGATTGAT+GGG | + | chr8.4:63944534-63944553 | MS.gene36877:CDS | 30.0% | |
| AGAATGAGCTTAATGCTTAT+AGG | + | chr8.4:63944639-63944658 | MS.gene36877:CDS | 30.0% | |
| AGCTGCAATTACTTCATTAT+AGG | - | chr8.4:63946893-63946912 | None:intergenic | 30.0% | |
| AGTGAAAACAACTTATGTAC+AGG | - | chr8.4:63945171-63945190 | None:intergenic | 30.0% | |
| ATTTATCAGTTCCCTTACTT+CGG | - | chr8.4:63947120-63947139 | None:intergenic | 30.0% | |
| CAGCGACCATAATTTAATTA+AGG | - | chr8.4:63946284-63946303 | None:intergenic | 30.0% | |
| CCATTAAGTATCAAAAAGCA+TGG | - | chr8.4:63945948-63945967 | None:intergenic | 30.0% | |
| CGTAGCTTGGAAATTATTAT+CGG | - | chr8.4:63946598-63946617 | None:intergenic | 30.0% | |
| CTCAAACTACTGGATTATTA+AGG | + | chr8.4:63946707-63946726 | MS.gene36877:intron | 30.0% | |
| CTGTATAGTACATGTGATTA+TGG | + | chr8.4:63947242-63947261 | MS.gene36877:intron | 30.0% | |
| GAATCGGTAATTGGTATTAA+TGG | + | chr8.4:63947674-63947693 | MS.gene36877:intron | 30.0% | |
| GAATGAGCTTAATGCTTATA+GGG | + | chr8.4:63944640-63944659 | MS.gene36877:CDS | 30.0% | |
| GCCAAAGAAATGAAGTTAAT+AGG | - | chr8.4:63946813-63946832 | None:intergenic | 30.0% | |
| GCTTATGATGAGATTAAGAA+AGG | + | chr8.4:63944488-63944507 | MS.gene36877:CDS | 30.0% | |
| GTAGCTTGGAAATTATTATC+GGG | - | chr8.4:63946597-63946616 | None:intergenic | 30.0% | |
| TACTTGTCTGTAAAAATGAC+TGG | + | chr8.4:63947481-63947500 | MS.gene36877:intron | 30.0% | |
| TCAAATCAACAGATACAAGT+GGG | - | chr8.4:63947951-63947970 | None:intergenic | 30.0% | |
| TGAAATTGAGAGTCTTAGTT+TGG | + | chr8.4:63947418-63947437 | MS.gene36877:intron | 30.0% | |
| TGACTGGAATTGAAAAGAAT+TGG | + | chr8.4:63947497-63947516 | MS.gene36877:intron | 30.0% | |
| TTAAAAGTTATGTTCGTACC+CGG | + | chr8.4:63946440-63946459 | MS.gene36877:CDS | 30.0% | |
| TTCAAATCAACAGATACAAG+TGG | - | chr8.4:63947952-63947971 | None:intergenic | 30.0% | |
| TTCTCATCGTGAAATGAATT+AGG | + | chr8.4:63944766-63944785 | MS.gene36877:intron | 30.0% | |
| TTTACTGAGCACAAATCAAA+AGG | - | chr8.4:63947615-63947634 | None:intergenic | 30.0% | |
| ! | AAAAAGCATGGAGAATGTAA+TGG | - | chr8.4:63945936-63945955 | None:intergenic | 30.0% |
| ! | AATACACTAGTTTAGGCATA+TGG | + | chr8.4:63947296-63947315 | MS.gene36877:intron | 30.0% |
| ! | ATTTGAAGTGTTTATGCTAG+TGG | - | chr8.4:63945116-63945135 | None:intergenic | 30.0% |
| ! | ATTTTGGATCCTTCCAAATA+AGG | - | chr8.4:63945704-63945723 | None:intergenic | 30.0% |
| ! | GATTAAAGAAAGCATACGAA+TGG | + | chr8.4:63946363-63946382 | MS.gene36877:CDS | 30.0% |
| ! | GGAAACTTTTACTATTCTCA+TGG | + | chr8.4:63946400-63946419 | MS.gene36877:CDS | 30.0% |
| ! | TCTTATATTGGTTACTGTGT+TGG | + | chr8.4:63946146-63946165 | MS.gene36877:intron | 30.0% |
| ! | TTTTGGATCCTTCCAAATAA+GGG | - | chr8.4:63945703-63945722 | None:intergenic | 30.0% |
| !! | ACGTCAGATTATTTTTCCAT+AGG | - | chr8.4:63944853-63944872 | None:intergenic | 30.0% |
| !! | CCATGCTTTTTGATACTTAA+TGG | + | chr8.4:63945945-63945964 | MS.gene36877:intron | 30.0% |
| AAAGGAATGACACCTTTCAA+AGG | + | chr8.4:63948339-63948358 | MS.gene36877:CDS | 35.0% | |
| AAGAAGGAAAAAAGCCTGTT+TGG | + | chr8.4:63948223-63948242 | MS.gene36877:intron | 35.0% | |
| AAGATTTGATCTCAGCAACA+TGG | - | chr8.4:63948405-63948424 | None:intergenic | 35.0% | |
| AAGGAATGACACCTTTCAAA+GGG | + | chr8.4:63948340-63948359 | MS.gene36877:CDS | 35.0% | |
| AATTGCATGCCGAAGTTATT+TGG | - | chr8.4:63948173-63948192 | None:intergenic | 35.0% | |
| ACTATTCTCATGGTCTACAA+GGG | + | chr8.4:63946410-63946429 | MS.gene36877:CDS | 35.0% | |
| ACTTAATGGCAGTTAGTAGT+GGG | + | chr8.4:63945959-63945978 | MS.gene36877:intron | 35.0% | |
| AGAAGGAAAAAAGCCTGTTT+GGG | + | chr8.4:63948224-63948243 | MS.gene36877:intron | 35.0% | |
| AGAGAATACGCAGTTGTTTA+GGG | + | chr8.4:63944511-63944530 | MS.gene36877:CDS | 35.0% | |
| AGTCTGAGCAAATTAACCAA+CGG | - | chr8.4:63945485-63945504 | None:intergenic | 35.0% | |
| ATTTGATAGGGCAGAGTTAA+AGG | + | chr8.4:63946954-63946973 | MS.gene36877:CDS | 35.0% | |
| CAACGCTTGTGTTTAGATTA+AGG | - | chr8.4:63945351-63945370 | None:intergenic | 35.0% | |
| CACGTCATTACTATTTGACA+TGG | + | chr8.4:63946209-63946228 | MS.gene36877:intron | 35.0% | |
| CTGATAATCAAATACAGGTC+CGG | + | chr8.4:63948037-63948056 | MS.gene36877:intron | 35.0% | |
| CTTCTGCAATTTCTTAGAGT+TGG | + | chr8.4:63947091-63947110 | MS.gene36877:CDS | 35.0% | |
| GAAATGAATCAGGGTATGTT+TGG | + | chr8.4:63945078-63945097 | MS.gene36877:intron | 35.0% | |
| GAAGTTGTGATGAAGATTGA+TGG | + | chr8.4:63944533-63944552 | MS.gene36877:CDS | 35.0% | |
| GGAAATTATTATCGGGTCAA+GGG | - | chr8.4:63946590-63946609 | None:intergenic | 35.0% | |
| GTTTAGATTAAGGCCCTATT+TGG | - | chr8.4:63945341-63945360 | None:intergenic | 35.0% | |
| TAAAAGTTATGTTCGTACCC+GGG | + | chr8.4:63946441-63946460 | MS.gene36877:CDS | 35.0% | |
| TACTATTCTCATGGTCTACA+AGG | + | chr8.4:63946409-63946428 | MS.gene36877:CDS | 35.0% | |
| TACTTAATGGCAGTTAGTAG+TGG | + | chr8.4:63945958-63945977 | MS.gene36877:intron | 35.0% | |
| TAGTAATGACGTGACAGTAT+AGG | - | chr8.4:63946202-63946221 | None:intergenic | 35.0% | |
| TGCAATAAATAGCAGAAACG+TGG | - | chr8.4:63946838-63946857 | None:intergenic | 35.0% | |
| TGCACTTGCAACATTTGATA+GGG | + | chr8.4:63946942-63946961 | MS.gene36877:CDS | 35.0% | |
| TGCTTAAGTACACCCTTATT+TGG | + | chr8.4:63945688-63945707 | MS.gene36877:intron | 35.0% | |
| TGGAAATTATTATCGGGTCA+AGG | - | chr8.4:63946591-63946610 | None:intergenic | 35.0% | |
| TGTCTCAAGCTATGTTAACA+AGG | + | chr8.4:63946546-63946565 | MS.gene36877:CDS | 35.0% | |
| TGTTGTGTTAAATAGGTGTG+TGG | + | chr8.4:63946014-63946033 | MS.gene36877:intron | 35.0% | |
| TTGTGCTTACAAATTCAACC+AGG | + | chr8.4:63948083-63948102 | MS.gene36877:intron | 35.0% | |
| TTTATCAGTTCCCTTACTTC+GGG | - | chr8.4:63947119-63947138 | None:intergenic | 35.0% | |
| ! | AATTCTAGTCAGCATTGAGA+TGG | + | chr8.4:63946510-63946529 | MS.gene36877:CDS | 35.0% |
| ! | AATTGAGAGTCTTAGTTTGG+TGG | + | chr8.4:63947421-63947440 | MS.gene36877:intron | 35.0% |
| ! | ACACAAGCGTTGTTTATGAT+AGG | + | chr8.4:63945359-63945378 | MS.gene36877:intron | 35.0% |
| ! | ACTTCAATATTAGGGCATCA+AGG | + | chr8.4:63948435-63948454 | MS.gene36877:CDS | 35.0% |
| ! | AGCAGCAAGCTTATACTTTT+TGG | - | chr8.4:63946650-63946669 | None:intergenic | 35.0% |
| ! | AGTTTGGATTTGCCACTTAT+CGG | + | chr8.4:63945434-63945453 | MS.gene36877:intron | 35.0% |
| ! | ATTCTAGTCAGCATTGAGAT+GGG | + | chr8.4:63946511-63946530 | MS.gene36877:CDS | 35.0% |
| ! | CGAATGGGATACAATGATTT+TGG | + | chr8.4:63946379-63946398 | MS.gene36877:CDS | 35.0% |
| ! | CTCTAAGAAATTGCAGAAGT+TGG | - | chr8.4:63947090-63947109 | None:intergenic | 35.0% |
| ! | GACTTTTACTCAAGGTAAGT+GGG | + | chr8.4:63947140-63947159 | MS.gene36877:intron | 35.0% |
| ! | TAAGTACACCCTTATTTGGA+AGG | + | chr8.4:63945692-63945711 | MS.gene36877:intron | 35.0% |
| ! | TGACTTTTACTCAAGGTAAG+TGG | + | chr8.4:63947139-63947158 | MS.gene36877:intron | 35.0% |
| ! | TTATTGCAGTTTCTAGAAGC+AGG | + | chr8.4:63946850-63946869 | MS.gene36877:intron | 35.0% |
| ! | TTCTTGTTTAACTGCGTCAA+AGG | + | chr8.4:63947395-63947414 | MS.gene36877:intron | 35.0% |
| !! | AGTTTCTAGAACCCTTTGAA+AGG | - | chr8.4:63948354-63948373 | None:intergenic | 35.0% |
| !! | GAGTTGGTGTTGTGTTAAAT+AGG | + | chr8.4:63946007-63946026 | MS.gene36877:intron | 35.0% |
| !! | GCAGCAAGCTTATACTTTTT+GGG | - | chr8.4:63946649-63946668 | None:intergenic | 35.0% |
| !! | TTTCAAAGGGTTCTAGAAAC+TGG | + | chr8.4:63948353-63948372 | MS.gene36877:CDS | 35.0% |
| !! | TTTTGCCGCTTATAAAGTGA+GGG | + | chr8.4:63944959-63944978 | MS.gene36877:intron | 35.0% |
| AATTTCCAAGCTACGATGTG+CGG | + | chr8.4:63946603-63946622 | MS.gene36877:CDS | 40.0% | |
| ATGAAGATTGATGGGAGGTT+GGG | + | chr8.4:63944542-63944561 | MS.gene36877:CDS | 40.0% | |
| CAAGATGTTGCAACATATGG+AGG | + | chr8.4:63946913-63946932 | MS.gene36877:CDS | 40.0% | |
| CCTTTCCCTCACTTTATAAG+CGG | - | chr8.4:63944967-63944986 | None:intergenic | 40.0% | |
| CGCTTATAAAGTGAGGGAAA+GGG | + | chr8.4:63944965-63944984 | MS.gene36877:intron | 40.0% | |
| CTATTCTCATGGTCTACAAG+GGG | + | chr8.4:63946411-63946430 | MS.gene36877:CDS | 40.0% | |
| GAATCAGGGTATGTTTGGAT+TGG | + | chr8.4:63945083-63945102 | MS.gene36877:intron | 40.0% | |
| GAGAGAATACGCAGTTGTTT+AGG | + | chr8.4:63944510-63944529 | MS.gene36877:CDS | 40.0% | |
| GCATTCAAGACAACTGTTGT+TGG | + | chr8.4:63947985-63948004 | MS.gene36877:CDS | 40.0% | |
| GCTCAAGATGTTGCAACATA+TGG | + | chr8.4:63946910-63946929 | MS.gene36877:CDS | 40.0% | |
| GTGCACTTGCAACATTTGAT+AGG | + | chr8.4:63946941-63946960 | MS.gene36877:CDS | 40.0% | |
| GTGTACTTAAGCACTCTAGA+AGG | - | chr8.4:63945681-63945700 | None:intergenic | 40.0% | |
| TATAGGTACTACCCAGTTCT+GGG | - | chr8.4:63946876-63946895 | None:intergenic | 40.0% | |
| TGCGCACATCCAAATAACTT+CGG | + | chr8.4:63948161-63948180 | MS.gene36877:intron | 40.0% | |
| TGTAGATTTCGTCGAGCATT+GGG | - | chr8.4:63944292-63944311 | None:intergenic | 40.0% | |
| TTATAGGTACTACCCAGTTC+TGG | - | chr8.4:63946877-63946896 | None:intergenic | 40.0% | |
| TTGATGTGGTGCAATAATCC+CGG | - | chr8.4:63946462-63946481 | None:intergenic | 40.0% | |
| TTGTGATGAAGATTGATGGG+AGG | + | chr8.4:63944537-63944556 | MS.gene36877:CDS | 40.0% | |
| ! | ATACAAGTGGGAGTGTATAC+TGG | - | chr8.4:63947939-63947958 | None:intergenic | 40.0% |
| ! | GATCGTAAAGTGTCTCAACA+TGG | - | chr8.4:63947894-63947913 | None:intergenic | 40.0% |
| ! | GTTTGGATTTGCCACTTATC+GGG | + | chr8.4:63945435-63945454 | MS.gene36877:intron | 40.0% |
| ! | TAGTTTGGTGGAATTGCACT+GGG | + | chr8.4:63947433-63947452 | MS.gene36877:intron | 40.0% |
| ! | TGAAACTTTTGGATCTGTGC+AGG | + | chr8.4:63948268-63948287 | MS.gene36877:intron | 40.0% |
| ! | TGGGAGTGTATACTGGATAA+GGG | - | chr8.4:63947932-63947951 | None:intergenic | 40.0% |
| ! | TTAGTTTGGTGGAATTGCAC+TGG | + | chr8.4:63947432-63947451 | MS.gene36877:intron | 40.0% |
| ! | TTTGGATTTGCCACTTATCG+GGG | + | chr8.4:63945436-63945455 | MS.gene36877:intron | 40.0% |
| !! | AAAGGGTTCTAGAAACTGGA+AGG | + | chr8.4:63948357-63948376 | MS.gene36877:CDS | 40.0% |
| !! | AAGGGTTCTAGAAACTGGAA+GGG | + | chr8.4:63948358-63948377 | MS.gene36877:CDS | 40.0% |
| !! | GATTTGATTTCAGGTTCCCA+AGG | - | chr8.4:63947846-63947865 | None:intergenic | 40.0% |
| !! | GTTTTGCCGCTTATAAAGTG+AGG | + | chr8.4:63944958-63944977 | MS.gene36877:intron | 40.0% |
| AACCTACAGCACAACTCACA+AGG | - | chr8.4:63945885-63945904 | None:intergenic | 45.0% | |
| AACCTTGTGAGTTGTGCTGT+AGG | + | chr8.4:63945880-63945899 | MS.gene36877:intron | 45.0% | |
| AATGACGTGACAGTATAGGC+TGG | - | chr8.4:63946198-63946217 | None:intergenic | 45.0% | |
| AGATGGAGCAGAAGAAAGAG+AGG | + | chr8.4:63944612-63944631 | MS.gene36877:CDS | 45.0% | |
| AGTAAGCTTCGATGTCGAGT+TGG | - | chr8.4:63944373-63944392 | None:intergenic | 45.0% | |
| ATAGGTGTGTGGCTTGAGAA+AGG | + | chr8.4:63946025-63946044 | MS.gene36877:intron | 45.0% | |
| ATGCACGACATGCAGATCAA+AGG | + | chr8.4:63948321-63948340 | MS.gene36877:CDS | 45.0% | |
| CAGGTCGAACAAAGATCATG+CGG | + | chr8.4:63944405-63944424 | MS.gene36877:CDS | 45.0% | |
| CCATGTTCTGTGAACTTCTG+AGG | + | chr8.4:63946070-63946089 | MS.gene36877:intron | 45.0% | |
| CCGCTTATAAAGTGAGGGAA+AGG | + | chr8.4:63944964-63944983 | MS.gene36877:intron | 45.0% | |
| CCTCAGAAGTTCACAGAACA+TGG | - | chr8.4:63946073-63946092 | None:intergenic | 45.0% | |
| CCTGAAATCAAATCTGTCGC+TGG | + | chr8.4:63947852-63947871 | MS.gene36877:CDS | 45.0% | |
| CTATGTTAACAAGGCAGAGC+AGG | + | chr8.4:63946555-63946574 | MS.gene36877:CDS | 45.0% | |
| CTCGACGAAATCTACACCAA+CGG | + | chr8.4:63944296-63944315 | MS.gene36877:CDS | 45.0% | |
| CTCTCTCTCTCTCAAACTAC+TGG | + | chr8.4:63946697-63946716 | MS.gene36877:intron | 45.0% | |
| GAAGAAGAGCAAGAACGCTA+CGG | + | chr8.4:63944442-63944461 | MS.gene36877:CDS | 45.0% | |
| GAGTTGTTCAAGTCCCAAAC+AGG | - | chr8.4:63948240-63948259 | None:intergenic | 45.0% | |
| GATGAAGATTGATGGGAGGT+TGG | + | chr8.4:63944541-63944560 | MS.gene36877:CDS | 45.0% | |
| GCTATCCAAGACAGCGTATA+TGG | + | chr8.4:63945212-63945231 | MS.gene36877:intron | 45.0% | |
| GGAAAAGGTAAAGCTCGACT+GGG | - | chr8.4:63946256-63946275 | None:intergenic | 45.0% | |
| GGTTATGTATGTAGCTCGAG+AGG | + | chr8.4:63945980-63945999 | MS.gene36877:intron | 45.0% | |
| GTGTAGATTTCGTCGAGCAT+TGG | - | chr8.4:63944293-63944312 | None:intergenic | 45.0% | |
| GTTAGCAATTGAGTGCTCTC+AGG | + | chr8.4:63946106-63946125 | MS.gene36877:intron | 45.0% | |
| TAGGTGTGTGGCTTGAGAAA+GGG | + | chr8.4:63946026-63946045 | MS.gene36877:intron | 45.0% | |
| TGATGTGGTGCAATAATCCC+GGG | - | chr8.4:63946461-63946480 | None:intergenic | 45.0% | |
| TGGAAAAGGTAAAGCTCGAC+TGG | - | chr8.4:63946257-63946276 | None:intergenic | 45.0% | |
| TGTTGCCATATACGCTGTCT+TGG | - | chr8.4:63945220-63945239 | None:intergenic | 45.0% | |
| ! | ACTGGGTATTTCTGCATGCA+TGG | + | chr8.4:63947450-63947469 | MS.gene36877:intron | 45.0% |
| ! | CCAGCGACAGATTTGATTTC+AGG | - | chr8.4:63947855-63947874 | None:intergenic | 45.0% |
| ! | CTTCCTGTCTGGAATACCTT+GGG | + | chr8.4:63947827-63947846 | MS.gene36877:CDS | 45.0% |
| ! | GAGGGGTATGAGATGGATTT+GGG | + | chr8.4:63944566-63944585 | MS.gene36877:CDS | 45.0% |
| ! | GGTATGAGATGGATTTGGGT+TGG | + | chr8.4:63944570-63944589 | MS.gene36877:CDS | 45.0% |
| ! | GTGGGAGTGTATACTGGATA+AGG | - | chr8.4:63947933-63947952 | None:intergenic | 45.0% |
| ! | TGAGGGGTATGAGATGGATT+TGG | + | chr8.4:63944565-63944584 | MS.gene36877:CDS | 45.0% |
| ! | TTGGATTTGCCACTTATCGG+GGG | + | chr8.4:63945437-63945456 | MS.gene36877:intron | 45.0% |
| ! | TTGGTTACTGTGTTGGTGCT+CGG | + | chr8.4:63946153-63946172 | MS.gene36877:intron | 45.0% |
| !! | AGAGTTGGTACCCGAAGTAA+GGG | + | chr8.4:63947106-63947125 | MS.gene36877:CDS | 45.0% |
| !! | ATGGATTTGGGTTGGTGTGA+TGG | + | chr8.4:63944578-63944597 | MS.gene36877:CDS | 45.0% |
| !! | GTATAAGCTTGCTGCTCGAA+AGG | + | chr8.4:63946654-63946673 | MS.gene36877:CDS | 45.0% |
| !! | TAGAGTTGGTACCCGAAGTA+AGG | + | chr8.4:63947105-63947124 | MS.gene36877:CDS | 45.0% |
| !! | TGGATTTGGGTTGGTGTGAT+GGG | + | chr8.4:63944579-63944598 | MS.gene36877:CDS | 45.0% |
| ATTGATGGGAGGTTGGGTGA+GGG | + | chr8.4:63944548-63944567 | MS.gene36877:CDS | 50.0% | |
| GACGAAATCTACACCAACGG+CGG | + | chr8.4:63944299-63944318 | MS.gene36877:CDS | 50.0% | |
| GCTTACTCCTCTCTCTACTC+AGG | + | chr8.4:63944386-63944405 | MS.gene36877:CDS | 50.0% | |
| GTGCTCTCAGGCTGGAAATT+TGG | + | chr8.4:63946118-63946137 | MS.gene36877:intron | 50.0% | |
| TGATGGGGTTGAGAGGAAGA+TGG | + | chr8.4:63944595-63944614 | MS.gene36877:CDS | 50.0% | |
| TGTTCGACCTGAGTAGAGAG+AGG | - | chr8.4:63944396-63944415 | None:intergenic | 50.0% | |
| ! | ATTCCAGACAGGAAGCGTAG+TGG | - | chr8.4:63947822-63947841 | None:intergenic | 50.0% |
| ! | ATTTGCCACTTATCGGGGGT+GGG | + | chr8.4:63945441-63945460 | MS.gene36877:intron | 50.0% |
| ! | GCTTCCTGTCTGGAATACCT+TGG | + | chr8.4:63947826-63947845 | MS.gene36877:CDS | 50.0% |
| ! | GTTCCCAAGGTATTCCAGAC+AGG | - | chr8.4:63947833-63947852 | None:intergenic | 50.0% |
| ! | TAGCTCGAGAGGCATAGAGT+TGG | + | chr8.4:63945991-63946010 | MS.gene36877:intron | 50.0% |
| !! | AAGCTTGCTGCTCGAAAGGT+TGG | + | chr8.4:63946658-63946677 | MS.gene36877:intron | 50.0% |
| !! | GGATTTGGGTTGGTGTGATG+GGG | + | chr8.4:63944580-63944599 | MS.gene36877:CDS | 50.0% |
| !! | TTCGTCGAGCATTGGGTTTG+AGG | - | chr8.4:63944285-63944304 | None:intergenic | 50.0% |
| AACCGTCGCGCAATCATGAG+CGG | + | chr8.4:63944344-63944363 | MS.gene36877:CDS | 55.0% | |
| CTAGAAGCAGGCCCAGAACT+GGG | + | chr8.4:63946862-63946881 | MS.gene36877:CDS | 55.0% | |
| GATTGATGGGAGGTTGGGTG+AGG | + | chr8.4:63944547-63944566 | MS.gene36877:CDS | 55.0% | |
| GCAATTGAGTGCTCTCAGGC+TGG | + | chr8.4:63946110-63946129 | MS.gene36877:intron | 55.0% | |
| TCTAGAAGCAGGCCCAGAAC+TGG | + | chr8.4:63946861-63946880 | MS.gene36877:CDS | 55.0% | |
| TTGATGGGAGGTTGGGTGAG+GGG | + | chr8.4:63944549-63944568 | MS.gene36877:CDS | 55.0% | |
| ! | ACGGTTGGTACGGCTGTTGT+CGG | - | chr8.4:63944330-63944349 | None:intergenic | 55.0% |
| ! | GATTTGCCACTTATCGGGGG+TGG | + | chr8.4:63945440-63945459 | MS.gene36877:intron | 55.0% |
| ! | GTTGGGTGAGGGGTATGAGA+TGG | + | chr8.4:63944559-63944578 | MS.gene36877:CDS | 55.0% |
| ! | GTTGGTGTGATGGGGTTGAG+AGG | + | chr8.4:63944588-63944607 | MS.gene36877:CDS | 55.0% |
| ! | TGATTGCGCGACGGTTGGTA+CGG | - | chr8.4:63944340-63944359 | None:intergenic | 55.0% |
| CACCGCTCATGATTGCGCGA+CGG | - | chr8.4:63944349-63944368 | None:intergenic | 60.0% | |
| CAGCCACTACGCTTCCTGTC+TGG | + | chr8.4:63947816-63947835 | MS.gene36877:intron | 60.0% | |
| GCTACGATGTGCGGCAGGAT+TGG | + | chr8.4:63946612-63946631 | MS.gene36877:CDS | 60.0% | |
| GCTCATGATTGCGCGACGGT+TGG | - | chr8.4:63944345-63944364 | None:intergenic | 60.0% | |
| TCCAAGCTACGATGTGCGGC+AGG | + | chr8.4:63946607-63946626 | MS.gene36877:CDS | 60.0% | |
| TCCTGCCGCACATCGTAGCT+TGG | - | chr8.4:63946611-63946630 | None:intergenic | 60.0% | |
| ! | TGGGGCACTTTGCAGACCGT+TGG | + | chr8.4:63945466-63945485 | MS.gene36877:intron | 60.0% |
| ACTTATCGGGGGTGGGCGTG+GGG | + | chr8.4:63945448-63945467 | MS.gene36877:intron | 65.0% | |
| CACTTATCGGGGGTGGGCGT+GGG | + | chr8.4:63945447-63945466 | MS.gene36877:intron | 65.0% | |
| GCAGCTCGACGCGCTTCGAT+TGG | + | chr8.4:63944466-63944485 | MS.gene36877:CDS | 65.0% | |
| CCACGCCCACCCCCGATAAG+TGG | - | chr8.4:63945449-63945468 | None:intergenic | 70.0% | |
| CCACTTATCGGGGGTGGGCG+TGG | + | chr8.4:63945446-63945465 | MS.gene36877:intron | 70.0% | |
| GTTGTCGGCGTCGCCGCCGT+TGG | - | chr8.4:63944315-63944334 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 63944263 | 63948466 | 63944263 | ID=MS.gene36877 |
| chr8.4 | mRNA | 63944263 | 63948466 | 63944263 | ID=MS.gene36877.t1;Parent=MS.gene36877 |
| chr8.4 | exon | 63944263 | 63944661 | 63944263 | ID=MS.gene36877.t1.exon1;Parent=MS.gene36877.t1 |
| chr8.4 | CDS | 63944263 | 63944661 | 63944263 | ID=cds.MS.gene36877.t1;Parent=MS.gene36877.t1 |
| chr8.4 | exon | 63946355 | 63946675 | 63946355 | ID=MS.gene36877.t1.exon2;Parent=MS.gene36877.t1 |
| chr8.4 | CDS | 63946355 | 63946675 | 63946355 | ID=cds.MS.gene36877.t1;Parent=MS.gene36877.t1 |
| chr8.4 | exon | 63946859 | 63946975 | 63946859 | ID=MS.gene36877.t1.exon3;Parent=MS.gene36877.t1 |
| chr8.4 | CDS | 63946859 | 63946975 | 63946859 | ID=cds.MS.gene36877.t1;Parent=MS.gene36877.t1 |
| chr8.4 | exon | 63947068 | 63947153 | 63947068 | ID=MS.gene36877.t1.exon4;Parent=MS.gene36877.t1 |
| chr8.4 | CDS | 63947068 | 63947153 | 63947068 | ID=cds.MS.gene36877.t1;Parent=MS.gene36877.t1 |
| chr8.4 | exon | 63947819 | 63948053 | 63947819 | ID=MS.gene36877.t1.exon5;Parent=MS.gene36877.t1 |
| chr8.4 | CDS | 63947819 | 63948053 | 63947819 | ID=cds.MS.gene36877.t1;Parent=MS.gene36877.t1 |
| chr8.4 | exon | 63948290 | 63948466 | 63948290 | ID=MS.gene36877.t1.exon6;Parent=MS.gene36877.t1 |
| chr8.4 | CDS | 63948290 | 63948466 | 63948290 | ID=cds.MS.gene36877.t1;Parent=MS.gene36877.t1 |
| Gene Sequence |
| Protein sequence |
