Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37340.t1 | XP_024628188.1 | 92.5 | 760 | 57 | 0 | 1 | 760 | 1 | 760 | 0.00E+00 | 1510.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37340.t1 | Q9LRH7 | 87.3 | 757 | 96 | 0 | 1 | 757 | 1 | 757 | 0.0e+00 | 1432.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37340.t1 | A0A072TXY8 | 92.5 | 760 | 57 | 0 | 1 | 760 | 1 | 760 | 0.0e+00 | 1507.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene37340 | 0.807215 | 5.64E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene37340 | 0.804565 | 2.03E-49 | -1.69E-46 |
| MS.gene052178 | MS.gene37340 | 0.805001 | 1.65E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene37340 | 0.801577 | 8.43E-49 | -1.69E-46 |
| MS.gene059894 | MS.gene37340 | 0.823214 | 1.56E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene37340 | 0.820884 | 5.42E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37340 | MS.gene034307 | PPI |
| MS.gene37340 | MS.gene07774 | PPI |
| MS.gene011204 | MS.gene37340 | PPI |
| MS.gene98129 | MS.gene37340 | PPI |
| MS.gene22278 | MS.gene37340 | PPI |
| MS.gene37340 | MS.gene21690 | PPI |
| MS.gene98126 | MS.gene37340 | PPI |
| MS.gene37340 | MS.gene21938 | PPI |
| MS.gene37340 | MS.gene87166 | PPI |
| MS.gene37340 | MS.gene053114 | PPI |
| MS.gene37340 | MS.gene000594 | PPI |
| MS.gene024711 | MS.gene37340 | PPI |
| MS.gene37340 | MS.gene034308 | PPI |
| MS.gene50096 | MS.gene37340 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37340.t1 | MTR_8g016975 | 92.500 | 760 | 57 | 0 | 1 | 760 | 1 | 760 | 0.0 | 1484 |
| MS.gene37340.t1 | MTR_8g016960 | 90.765 | 758 | 63 | 2 | 1 | 757 | 1 | 752 | 0.0 | 1436 |
| MS.gene37340.t1 | MTR_8g017020 | 88.026 | 760 | 57 | 2 | 1 | 760 | 1 | 726 | 0.0 | 1392 |
| MS.gene37340.t1 | MTR_4g005190 | 80.185 | 757 | 150 | 0 | 1 | 757 | 1 | 757 | 0.0 | 1318 |
| MS.gene37340.t1 | MTR_0013s0230 | 79.024 | 758 | 158 | 1 | 1 | 757 | 1 | 758 | 0.0 | 1299 |
| MS.gene37340.t1 | MTR_4g005270 | 78.336 | 757 | 164 | 0 | 1 | 757 | 1 | 757 | 0.0 | 1291 |
| MS.gene37340.t1 | MTR_7g034535 | 76.945 | 694 | 159 | 1 | 68 | 760 | 3 | 696 | 0.0 | 1164 |
| MS.gene37340.t1 | MTR_4g005190 | 79.372 | 669 | 138 | 0 | 1 | 669 | 1 | 669 | 0.0 | 1156 |
| MS.gene37340.t1 | MTR_3g436160 | 77.548 | 677 | 148 | 1 | 81 | 757 | 24 | 696 | 0.0 | 1119 |
| MS.gene37340.t1 | MTR_6g093180 | 58.598 | 756 | 310 | 2 | 1 | 756 | 1 | 753 | 0.0 | 993 |
| MS.gene37340.t1 | MTR_6g034985 | 55.556 | 756 | 333 | 2 | 1 | 756 | 1 | 753 | 0.0 | 934 |
| MS.gene37340.t1 | MTR_5g008810 | 57.728 | 757 | 316 | 4 | 1 | 756 | 1 | 754 | 0.0 | 926 |
| MS.gene37340.t1 | MTR_6g035010 | 54.172 | 755 | 343 | 2 | 1 | 755 | 1 | 752 | 0.0 | 900 |
| MS.gene37340.t1 | MTR_6g093100 | 51.351 | 777 | 356 | 9 | 1 | 757 | 1 | 775 | 0.0 | 823 |
| MS.gene37340.t1 | MTR_6g088140 | 51.181 | 762 | 346 | 7 | 1 | 757 | 1 | 741 | 0.0 | 821 |
| MS.gene37340.t1 | MTR_7g062020 | 50.455 | 769 | 367 | 5 | 1 | 757 | 1 | 767 | 0.0 | 819 |
| MS.gene37340.t1 | MTR_6g088140 | 50.000 | 674 | 312 | 6 | 1 | 670 | 1 | 653 | 0.0 | 706 |
| MS.gene37340.t1 | MTR_8g016940 | 68.889 | 270 | 82 | 1 | 491 | 760 | 2 | 269 | 1.79e-133 | 396 |
| MS.gene37340.t1 | MTR_8g017040 | 82.090 | 67 | 12 | 0 | 1 | 67 | 1 | 67 | 1.32e-32 | 122 |
| MS.gene37340.t1 | MTR_3g436170 | 77.941 | 68 | 15 | 0 | 1 | 68 | 1 | 68 | 1.42e-29 | 112 |
| MS.gene37340.t1 | MTR_8g016570 | 69.697 | 66 | 20 | 0 | 695 | 760 | 28 | 93 | 4.41e-25 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37340.t1 | AT1G78960 | 70.690 | 754 | 220 | 1 | 1 | 753 | 1 | 754 | 0.0 | 1168 |
| MS.gene37340.t1 | AT1G78960 | 70.690 | 754 | 220 | 1 | 1 | 753 | 1 | 754 | 0.0 | 1168 |
| MS.gene37340.t1 | AT1G78960 | 70.690 | 754 | 220 | 1 | 1 | 753 | 1 | 754 | 0.0 | 1168 |
| MS.gene37340.t1 | AT1G78950 | 71.240 | 758 | 217 | 1 | 1 | 757 | 1 | 758 | 0.0 | 1160 |
| MS.gene37340.t1 | AT1G78950 | 71.240 | 758 | 217 | 1 | 1 | 757 | 10 | 767 | 0.0 | 1160 |
| MS.gene37340.t1 | AT1G78955 | 69.525 | 758 | 230 | 1 | 1 | 757 | 1 | 758 | 0.0 | 1144 |
| MS.gene37340.t1 | AT1G78960 | 70.539 | 723 | 212 | 1 | 1 | 722 | 1 | 723 | 0.0 | 1115 |
| MS.gene37340.t1 | AT1G78970 | 67.414 | 758 | 243 | 2 | 1 | 757 | 1 | 755 | 0.0 | 1095 |
| MS.gene37340.t1 | AT1G78970 | 67.414 | 758 | 243 | 2 | 1 | 757 | 1 | 755 | 0.0 | 1095 |
| MS.gene37340.t1 | AT1G78970 | 67.414 | 758 | 243 | 2 | 1 | 757 | 1 | 755 | 0.0 | 1095 |
| MS.gene37340.t1 | AT1G66960 | 64.427 | 759 | 269 | 1 | 1 | 758 | 10 | 768 | 0.0 | 1083 |
| MS.gene37340.t1 | AT1G66960 | 64.427 | 759 | 269 | 1 | 1 | 758 | 1 | 759 | 0.0 | 1082 |
| MS.gene37340.t1 | AT1G66960 | 64.427 | 759 | 269 | 1 | 1 | 758 | 1 | 759 | 0.0 | 1082 |
| MS.gene37340.t1 | AT1G66960 | 64.427 | 759 | 269 | 1 | 1 | 758 | 1 | 759 | 0.0 | 1082 |
| MS.gene37340.t1 | AT1G78955 | 70.087 | 692 | 207 | 0 | 66 | 757 | 2 | 693 | 0.0 | 1057 |
| MS.gene37340.t1 | AT1G78955 | 69.651 | 659 | 200 | 0 | 66 | 724 | 2 | 660 | 0.0 | 997 |
| MS.gene37340.t1 | AT1G78960 | 73.134 | 603 | 162 | 0 | 151 | 753 | 1 | 603 | 0.0 | 977 |
| MS.gene37340.t1 | AT2G07050 | 56.522 | 759 | 326 | 4 | 1 | 758 | 1 | 756 | 0.0 | 925 |
| MS.gene37340.t1 | AT5G36150 | 54.354 | 758 | 345 | 1 | 1 | 757 | 1 | 758 | 0.0 | 920 |
| MS.gene37340.t1 | AT5G36150 | 54.354 | 758 | 345 | 1 | 1 | 757 | 1 | 758 | 0.0 | 920 |
| MS.gene37340.t1 | AT1G78955 | 69.256 | 605 | 186 | 0 | 66 | 670 | 2 | 606 | 0.0 | 912 |
| MS.gene37340.t1 | AT1G78500 | 55.906 | 762 | 329 | 3 | 1 | 755 | 1 | 762 | 0.0 | 910 |
| MS.gene37340.t1 | AT1G78500 | 55.906 | 762 | 329 | 3 | 1 | 755 | 1 | 762 | 0.0 | 910 |
| MS.gene37340.t1 | AT1G78955 | 71.698 | 583 | 165 | 0 | 175 | 757 | 1 | 583 | 0.0 | 907 |
| MS.gene37340.t1 | AT5G48010 | 54.510 | 765 | 339 | 4 | 1 | 756 | 1 | 765 | 0.0 | 904 |
| MS.gene37340.t1 | AT4G15370 | 53.816 | 760 | 339 | 4 | 1 | 755 | 1 | 753 | 0.0 | 892 |
| MS.gene37340.t1 | AT4G15340 | 54.402 | 761 | 341 | 3 | 1 | 755 | 1 | 761 | 0.0 | 891 |
| MS.gene37340.t1 | AT4G15370 | 53.604 | 763 | 339 | 5 | 1 | 755 | 1 | 756 | 0.0 | 888 |
| MS.gene37340.t1 | AT5G48010 | 53.725 | 765 | 337 | 5 | 1 | 756 | 1 | 757 | 0.0 | 884 |
| MS.gene37340.t1 | AT5G42600 | 53.228 | 759 | 352 | 3 | 1 | 757 | 1 | 758 | 0.0 | 874 |
| MS.gene37340.t1 | AT2G07050 | 56.907 | 666 | 284 | 3 | 94 | 758 | 2 | 665 | 0.0 | 830 |
| MS.gene37340.t1 | AT3G45130 | 53.026 | 760 | 347 | 6 | 1 | 756 | 1 | 754 | 0.0 | 798 |
| MS.gene37340.t1 | AT3G45130 | 53.026 | 760 | 347 | 6 | 1 | 756 | 1 | 754 | 0.0 | 798 |
| MS.gene37340.t1 | AT3G45130 | 53.026 | 760 | 347 | 6 | 1 | 756 | 1 | 754 | 0.0 | 798 |
| MS.gene37340.t1 | AT3G45130 | 53.026 | 760 | 347 | 6 | 1 | 756 | 1 | 754 | 0.0 | 797 |
| MS.gene37340.t1 | AT3G45130 | 53.026 | 760 | 347 | 6 | 1 | 756 | 1 | 754 | 0.0 | 797 |
| MS.gene37340.t1 | AT3G29255 | 47.625 | 758 | 336 | 5 | 2 | 757 | 6 | 704 | 0.0 | 760 |
| MS.gene37340.t1 | AT4G15340 | 53.439 | 567 | 258 | 3 | 1 | 561 | 1 | 567 | 0.0 | 651 |
| MS.gene37340.t1 | AT1G78480 | 45.270 | 148 | 61 | 4 | 71 | 207 | 48 | 186 | 1.09e-27 | 111 |
Find 177 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGCTCCCAGACTATTTA+TGG | 0.135848 | 8.4:+75018020 | MS.gene37340:CDS |
| ACTGAATCATATAACCTTTC+AGG | 0.148460 | 8.4:-75019123 | None:intergenic |
| TGATCTTCTCCGACGCTTTC+AGG | 0.172386 | 8.4:+75005264 | MS.gene37340:CDS |
| CTTTGATACAAGATCTAATA+TGG | 0.197033 | 8.4:+75017711 | MS.gene37340:CDS |
| TCTCTAACCAGCTTGTTTAA+TGG | 0.206776 | 8.4:-75017776 | None:intergenic |
| TACTTCTTCCTTTCTATGCT+TGG | 0.225450 | 8.4:-75020467 | None:intergenic |
| TTGCACTGCAGAAGGTTTAA+AGG | 0.275077 | 8.4:+75018946 | MS.gene37340:CDS |
| CACTTGTTTGTTTATCTTCA+AGG | 0.278614 | 8.4:-75020519 | None:intergenic |
| TGGGGAATTTGCTTCACTTA+TGG | 0.279204 | 8.4:+75020562 | MS.gene37340:CDS |
| ATCTCTTTCCGATACTCTTC+GGG | 0.294290 | 8.4:-75012191 | None:intergenic |
| ATGGTTCATGGTATGGAAAT+TGG | 0.299175 | 8.4:+75020542 | MS.gene37340:CDS |
| CAAAGAGAGGATGGTGGGTG+GGG | 0.306578 | 8.4:+75020679 | MS.gene37340:CDS |
| TTGGACCAATATCCTCAATT+AGG | 0.320182 | 8.4:-75018220 | None:intergenic |
| ACTTCTTCCTTTCTATGCTT+GGG | 0.332591 | 8.4:-75020466 | None:intergenic |
| TTTAAGATCAATGGTGTGAT+TGG | 0.334695 | 8.4:-75017486 | None:intergenic |
| TGGTTCATGGTATGGAAATT+GGG | 0.335402 | 8.4:+75020543 | MS.gene37340:CDS |
| CAGGTTAGGGACAACCCTTC+AGG | 0.335838 | 8.4:+75018842 | MS.gene37340:intron |
| ACTAACCTAATTGAGGATAT+TGG | 0.353139 | 8.4:+75018215 | MS.gene37340:CDS |
| CAGGCTCCCAGACTATTTAT+GGG | 0.362880 | 8.4:+75018021 | MS.gene37340:CDS |
| TCAGAAACCCATAAATAGTC+TGG | 0.363871 | 8.4:-75018028 | None:intergenic |
| AAGTGCTGATGTGTGATTTA+CGG | 0.366346 | 8.4:-75011794 | None:intergenic |
| ATGCCTATGTCTTACTTGTA+TGG | 0.368802 | 8.4:+75017447 | MS.gene37340:CDS |
| TCTCTCAACTTTAAGATCAA+TGG | 0.375715 | 8.4:-75017495 | None:intergenic |
| TTGTTAAGAGTAAATATGTT+TGG | 0.377782 | 8.4:-75005121 | None:intergenic |
| AGATACTTGGTATCTTTGAT+TGG | 0.378106 | 8.4:+75017214 | MS.gene37340:intron |
| TTTGTGCATGCTTGCTTGTT+GGG | 0.380977 | 8.4:+75017958 | MS.gene37340:CDS |
| TCCTCACCTTTGCACATAGA+TGG | 0.384081 | 8.4:-75017566 | None:intergenic |
| AAAGAGAGGATGGTGGGTGG+GGG | 0.390595 | 8.4:+75020680 | MS.gene37340:CDS |
| TCAACTTGAGCTCTCTCCTC+AGG | 0.392288 | 8.4:-75005190 | None:intergenic |
| TATTTATGGGTTTCTGAAGA+TGG | 0.392476 | 8.4:+75018034 | MS.gene37340:CDS |
| GGATAGTTTATACATATTCA+TGG | 0.398348 | 8.4:+75017733 | MS.gene37340:CDS |
| TGTTAAGAGTAAATATGTTT+GGG | 0.400394 | 8.4:-75005120 | None:intergenic |
| TTTACTCTTAACAACTTTGT+GGG | 0.402264 | 8.4:+75005130 | MS.gene37340:CDS |
| AAGAGAGGATGGTGGGTGGG+GGG | 0.403007 | 8.4:+75020681 | MS.gene37340:CDS |
| AAATCACACATCAGCACTTC+AGG | 0.403401 | 8.4:+75011798 | MS.gene37340:CDS |
| AATCTCTTTCCGATACTCTT+CGG | 0.406999 | 8.4:-75012192 | None:intergenic |
| ATTTACTCTTAACAACTTTG+TGG | 0.408181 | 8.4:+75005129 | MS.gene37340:CDS |
| GTGTGACATACGTACCTTCA+TGG | 0.412285 | 8.4:+75017094 | MS.gene37340:CDS |
| ACAATTCTCATAAGTCTTGC+CGG | 0.416334 | 8.4:-75020617 | None:intergenic |
| TTCTTGAATGCATCTCCATT+TGG | 0.417078 | 8.4:-75017989 | None:intergenic |
| TTTCAATTGAAGAATGAAGA+TGG | 0.420009 | 8.4:+75016925 | MS.gene37340:intron |
| CTTGTGCTAGAGCAAGAAAA+TGG | 0.420705 | 8.4:+75017055 | MS.gene37340:CDS |
| TGAAACTAGCATCCCATGTT+TGG | 0.421691 | 8.4:-75018172 | None:intergenic |
| AACAAACAAGTGATGGTTCA+TGG | 0.421729 | 8.4:+75020530 | MS.gene37340:CDS |
| TTTGCTTCACTTATGGTACT+TGG | 0.425924 | 8.4:+75020569 | MS.gene37340:CDS |
| AAAGGGTGGTTTACCAGCTT+GGG | 0.427919 | 8.4:+75019885 | MS.gene37340:CDS |
| GGCTTTGATTCATGCTGGCC+AGG | 0.434004 | 8.4:+75020884 | MS.gene37340:CDS |
| CATTGGCCTGCTCTAACTGC+TGG | 0.434123 | 8.4:+75011832 | MS.gene37340:CDS |
| CTGTCTGTACAATATTTGAT+TGG | 0.435205 | 8.4:-75020848 | None:intergenic |
| TGTCTTACTTGTATGGGAAA+AGG | 0.437822 | 8.4:+75017454 | MS.gene37340:CDS |
| CCGTTACATATATTGTCATC+AGG | 0.444196 | 8.4:+75012217 | MS.gene37340:CDS |
| CCATAAATAGTCTGGGAGCC+TGG | 0.445271 | 8.4:-75018020 | None:intergenic |
| AAAAGGGTGGTTTACCAGCT+TGG | 0.445514 | 8.4:+75019884 | MS.gene37340:CDS |
| ACAGACAGCATGGGCTCTAA+TGG | 0.445618 | 8.4:+75020863 | MS.gene37340:CDS |
| TACATATGTATGCGAATACT+TGG | 0.446330 | 8.4:+75017003 | MS.gene37340:CDS |
| CAGATATATATACCTCTTGA+AGG | 0.447238 | 8.4:+75020822 | MS.gene37340:intron |
| AACCATTGGATGTGTGGAAA+AGG | 0.450756 | 8.4:+75017859 | MS.gene37340:CDS |
| GGATATGTTTCATTGCTACT+TGG | 0.452661 | 8.4:-75017808 | None:intergenic |
| AATATCCTCAATTAGGTTAG+TGG | 0.457632 | 8.4:-75018213 | None:intergenic |
| ATCAATGTTGCCTCCGGAGA+TGG | 0.460229 | 8.4:+75019083 | MS.gene37340:CDS |
| AGAGAAGGTCCATGACCCTT+TGG | 0.461743 | 8.4:-75018894 | None:intergenic |
| TTAATTGAGATGAACCTGTT+GGG | 0.462853 | 8.4:-75021087 | None:intergenic |
| TCCAACTAGAGGAGGGTGAT+TGG | 0.463359 | 8.4:+75021063 | MS.gene37340:CDS |
| TCATTTCTTCTTAAGCATCC+AGG | 0.465140 | 8.4:+75017279 | MS.gene37340:CDS |
| GGTACTTGGTTTGCACTTGG+TGG | 0.465782 | 8.4:+75020583 | MS.gene37340:CDS |
| TGAAGAATGAAGATGGAGGA+TGG | 0.468223 | 8.4:+75016932 | MS.gene37340:intron |
| GCTTGCCACTAACCTAATTG+AGG | 0.471409 | 8.4:+75018208 | MS.gene37340:CDS |
| ACCTTCTCTGATCAAGATCA+TGG | 0.472457 | 8.4:+75018908 | MS.gene37340:CDS |
| TTCAGCATCAATTCAAGCTA+TGG | 0.474031 | 8.4:+75020423 | MS.gene37340:CDS |
| GGAGGGTGATTGGCCCCAAC+AGG | 0.475447 | 8.4:+75021073 | MS.gene37340:CDS |
| ACAAGTGATGGTTCATGGTA+TGG | 0.477045 | 8.4:+75020535 | MS.gene37340:CDS |
| TTCAGGCTAGTGATGGTCAT+TGG | 0.484302 | 8.4:+75011815 | MS.gene37340:CDS |
| GAAGAATGAAGATGGAGGAT+GGG | 0.486750 | 8.4:+75016933 | MS.gene37340:intron |
| GCCAATCACCCTCCTCTAGT+TGG | 0.494565 | 8.4:-75021064 | None:intergenic |
| GACTATTCTCATCTTCATAG+TGG | 0.496269 | 8.4:-75017829 | None:intergenic |
| ACAAAGAGAGGATGGTGGGT+GGG | 0.498212 | 8.4:+75020678 | MS.gene37340:CDS |
| AATGTTGTGTTATACTCGAT+TGG | 0.498834 | 8.4:+75017419 | MS.gene37340:CDS |
| CGATGTTCCCCGAAGAGTAT+CGG | 0.500020 | 8.4:+75012183 | MS.gene37340:CDS |
| GCAAGTGTAATGATTGAAGA+TGG | 0.501054 | 8.4:+75011727 | MS.gene37340:CDS |
| AAGAATGAAGATGGAGGATG+GGG | 0.503155 | 8.4:+75016934 | MS.gene37340:intron |
| TATGGTACTTGGTTTGCACT+TGG | 0.503961 | 8.4:+75020580 | MS.gene37340:CDS |
| ACTTTGTGGGGAGGCAGACA+TGG | 0.504750 | 8.4:+75005143 | MS.gene37340:CDS |
| AATATATCCCAAGCATAGAA+AGG | 0.507649 | 8.4:+75020459 | MS.gene37340:CDS |
| TGAATTCATCAAGAATTCTC+AGG | 0.508327 | 8.4:+75018259 | MS.gene37340:CDS |
| TTGTATGGGAAAAGGTTTGT+CGG | 0.510227 | 8.4:+75017462 | MS.gene37340:CDS |
| CATATTAGATCTTGTATCAA+AGG | 0.511080 | 8.4:-75017710 | None:intergenic |
| CATTCAAGAAGCATCTTGCC+AGG | 0.513690 | 8.4:+75018002 | MS.gene37340:CDS |
| ACAGCACGATGAAGAGGAGT+AGG | 0.514365 | 8.4:-75021023 | None:intergenic |
| TGCCTATGTCTTACTTGTAT+GGG | 0.519378 | 8.4:+75017448 | MS.gene37340:CDS |
| TTTGATACAAGATCTAATAT+GGG | 0.519547 | 8.4:+75017712 | MS.gene37340:CDS |
| CTAATGGCTTTGATTCATGC+TGG | 0.519972 | 8.4:+75020879 | MS.gene37340:CDS |
| GTCAAAAGCTCTAGAATGGT+TGG | 0.520457 | 8.4:+75019912 | MS.gene37340:CDS |
| AATGTTGCCTCCGGAGATGG+TGG | 0.521185 | 8.4:+75019086 | MS.gene37340:CDS |
| AGAAAATGGATTCATGATCA+TGG | 0.523003 | 8.4:+75017069 | MS.gene37340:CDS |
| TGTTGCCTCCGGAGATGGTG+GGG | 0.526903 | 8.4:+75019088 | MS.gene37340:CDS |
| TGTGACATACGTACCTTCAT+GGG | 0.528965 | 8.4:+75017095 | MS.gene37340:CDS |
| AATAGTCGATACATAACCAT+TGG | 0.529425 | 8.4:+75017845 | MS.gene37340:CDS |
| GAAGGAAGCATCCAAAACTC+AGG | 0.531004 | 8.4:-75017258 | None:intergenic |
| TTAGATCTTGTATCAAAGGA+TGG | 0.533010 | 8.4:-75017706 | None:intergenic |
| TAGATCTTGTATCAAAGGAT+GGG | 0.537511 | 8.4:-75017705 | None:intergenic |
| TGATCAAGATCATGGATGGC+AGG | 0.540465 | 8.4:+75018916 | MS.gene37340:CDS |
| CAAATATTGTACAGACAGCA+TGG | 0.541559 | 8.4:+75020853 | MS.gene37340:CDS |
| ATTGGTCCAACACTTGCAAA+AGG | 0.542743 | 8.4:+75018233 | MS.gene37340:CDS |
| ATACTTGGAGAAGGTCCAAA+TGG | 0.552951 | 8.4:+75017018 | MS.gene37340:CDS |
| TCATTGGCCATTAAACAAGC+TGG | 0.555486 | 8.4:+75017769 | MS.gene37340:CDS |
| AGAGGGCCAGCAGTTAGAGC+AGG | 0.555820 | 8.4:-75011838 | None:intergenic |
| GGTTCATGGTATGGAAATTG+GGG | 0.556213 | 8.4:+75020544 | MS.gene37340:CDS |
| GGATGCTTAAGAAGAAATGA+AGG | 0.557808 | 8.4:-75017276 | None:intergenic |
| GTTTCTGATTGCACTGCAGA+AGG | 0.558473 | 8.4:+75018938 | MS.gene37340:CDS |
| ATGTTGCCTCCGGAGATGGT+GGG | 0.561684 | 8.4:+75019087 | MS.gene37340:CDS |
| GAAGATAAACAAACAAGTGA+TGG | 0.562379 | 8.4:+75020523 | MS.gene37340:CDS |
| CAGAAACCCATAAATAGTCT+GGG | 0.562486 | 8.4:-75018027 | None:intergenic |
| CTTGGTGGTCTAGCAGCCGC+CGG | 0.562989 | 8.4:+75020598 | MS.gene37340:CDS |
| ATGTACCGTCATATCTCCAA+AGG | 0.564856 | 8.4:+75018878 | MS.gene37340:CDS |
| AGCCGTCAAAAGCTCTAGAA+TGG | 0.565890 | 8.4:+75019908 | MS.gene37340:CDS |
| GTCATATCTCCAAAGGGTCA+TGG | 0.566439 | 8.4:+75018885 | MS.gene37340:CDS |
| GCGTCGGAGAAGATCACTGC+AGG | 0.569224 | 8.4:-75005257 | None:intergenic |
| GACATGGGAGTTTGATGCTG+AGG | 0.570505 | 8.4:+75005159 | MS.gene37340:CDS |
| TGGGAGTTTGATGCTGAGGC+TGG | 0.570662 | 8.4:+75005163 | MS.gene37340:CDS |
| TTCCCATACAAGTAAGACAT+AGG | 0.571569 | 8.4:-75017450 | None:intergenic |
| CATCAATCTCCAACTAGAGG+AGG | 0.575439 | 8.4:+75021055 | MS.gene37340:CDS |
| TAATTGAGATGAACCTGTTG+GGG | 0.575527 | 8.4:-75021086 | None:intergenic |
| GTTGCCTCCGGAGATGGTGG+GGG | 0.577434 | 8.4:+75019089 | MS.gene37340:CDS |
| ATGCTCTCGTAATCTCCTGA+AGG | 0.577478 | 8.4:-75018857 | None:intergenic |
| TGCTCTCGTAATCTCCTGAA+GGG | 0.577705 | 8.4:-75018856 | None:intergenic |
| ATTGAAACTATACAGATACT+TGG | 0.578759 | 8.4:+75017201 | MS.gene37340:intron |
| CTCTTAACAACTTTGTGGGG+AGG | 0.581312 | 8.4:+75005134 | MS.gene37340:CDS |
| AAGGAAGCATCCAAAACTCA+GGG | 0.583554 | 8.4:-75017257 | None:intergenic |
| TCTGCTTACAATACAAAGAG+AGG | 0.583811 | 8.4:+75020666 | MS.gene37340:CDS |
| CTTACAATACAAAGAGAGGA+TGG | 0.587182 | 8.4:+75020670 | MS.gene37340:CDS |
| TTTGATTGGCTTCCTTCAAG+AGG | 0.588636 | 8.4:-75020834 | None:intergenic |
| ATACATAACCATTGGATGTG+TGG | 0.588747 | 8.4:+75017853 | MS.gene37340:CDS |
| AGATCTTGTATCAAAGGATG+GGG | 0.592595 | 8.4:-75017704 | None:intergenic |
| TACAAAGAGAGGATGGTGGG+TGG | 0.592851 | 8.4:+75020677 | MS.gene37340:CDS |
| CAATACAAAGAGAGGATGGT+GGG | 0.595099 | 8.4:+75020674 | MS.gene37340:CDS |
| TCCATGATCTTGATCAGAGA+AGG | 0.596019 | 8.4:-75018909 | None:intergenic |
| AGGGAGGAAAATAAAAGAGA+GGG | 0.603160 | 8.4:-75011855 | None:intergenic |
| GTGCATGCTTGCTTGTTGGG+TGG | 0.605995 | 8.4:+75017961 | MS.gene37340:CDS |
| CTTTAGCTGAATATCGTAGA+CGG | 0.606153 | 8.4:+75021655 | MS.gene37340:CDS |
| CCTGATGACAATATATGTAA+CGG | 0.606189 | 8.4:-75012217 | None:intergenic |
| TAGAGATATATTTCCAACGT+GGG | 0.606585 | 8.4:+75021632 | MS.gene37340:CDS |
| TTACTCTTAACAACTTTGTG+GGG | 0.606766 | 8.4:+75005131 | MS.gene37340:CDS |
| CAATTGAAGAATGAAGATGG+AGG | 0.608513 | 8.4:+75016928 | MS.gene37340:intron |
| TCTCTGATCAAGATCATGGA+TGG | 0.608749 | 8.4:+75018912 | MS.gene37340:CDS |
| AATCATCAATCTCCAACTAG+AGG | 0.616577 | 8.4:+75021052 | MS.gene37340:CDS |
| ATCAATCTCCAACTAGAGGA+GGG | 0.616631 | 8.4:+75021056 | MS.gene37340:CDS |
| TAAGATAATTTATACATGCA+GGG | 0.618282 | 8.4:-75018062 | None:intergenic |
| GGATGGGGACTACACGTAGA+GGG | 0.620400 | 8.4:+75016949 | MS.gene37340:CDS |
| TCAGCACTTCAGGCTAGTGA+TGG | 0.621835 | 8.4:+75011808 | MS.gene37340:CDS |
| TGTATGCGAATACTTGGAGA+AGG | 0.623491 | 8.4:+75017009 | MS.gene37340:CDS |
| AAGGGAGGAAAATAAAAGAG+AGG | 0.624822 | 8.4:-75011856 | None:intergenic |
| CAGCACGATGAAGAGGAGTA+GGG | 0.624876 | 8.4:-75021022 | None:intergenic |
| CAATCCAGTAGAATTTCTTG+AGG | 0.625037 | 8.4:+75020366 | MS.gene37340:CDS |
| TGTTGGGTGGAAGATCCAAA+TGG | 0.626156 | 8.4:+75017974 | MS.gene37340:CDS |
| CTTTGTGGGGAGGCAGACAT+GGG | 0.628730 | 8.4:+75005144 | MS.gene37340:CDS |
| ATATATTATATAAGATGTGG+AGG | 0.629354 | 8.4:+75005071 | None:intergenic |
| CTTGGAGAAGGTCCAAATGG+AGG | 0.629669 | 8.4:+75017021 | MS.gene37340:CDS |
| TGTACCGTCATATCTCCAAA+GGG | 0.630656 | 8.4:+75018879 | MS.gene37340:CDS |
| AGTACGCCATCTATGTGCAA+AGG | 0.630962 | 8.4:+75017560 | MS.gene37340:CDS |
| ATGACCCTTTGGAGATATGA+CGG | 0.636375 | 8.4:-75018883 | None:intergenic |
| AGATAATTACCTGAAAGCGT+CGG | 0.641920 | 8.4:-75005273 | None:intergenic |
| AAATATTGTACAGACAGCAT+GGG | 0.647342 | 8.4:+75020854 | MS.gene37340:CDS |
| AGGAAGCATCCAAAACTCAG+GGG | 0.654693 | 8.4:-75017256 | None:intergenic |
| TGCTGAGGCTGGTACTCCTG+AGG | 0.658323 | 8.4:+75005174 | MS.gene37340:CDS |
| ATATGCATACTCACCAAGGG+AGG | 0.661491 | 8.4:-75011871 | None:intergenic |
| ATTTACGGCTCTTCTTAACG+TGG | 0.664953 | 8.4:-75011779 | None:intergenic |
| GTGACATACGTACCTTCATG+GGG | 0.670176 | 8.4:+75017096 | MS.gene37340:CDS |
| GGAAGCATCCAAAACTCAGG+GGG | 0.672851 | 8.4:-75017255 | None:intergenic |
| AGGATGGGGACTACACGTAG+AGG | 0.675584 | 8.4:+75016948 | MS.gene37340:CDS |
| ACAATACAAAGAGAGGATGG+TGG | 0.676874 | 8.4:+75020673 | MS.gene37340:CDS |
| TATTCAGCTAAAGCCCACGT+TGG | 0.690016 | 8.4:-75021645 | None:intergenic |
| TGGAGGCTGAAGATAGCAGA+TGG | 0.701426 | 8.4:+75005088 | MS.gene37340:CDS |
| ATTCTCATAAGTCTTGCCGG+CGG | 0.723670 | 8.4:-75020614 | None:intergenic |
| TCTCTTTCCGATACTCTTCG+GGG | 0.724539 | 8.4:-75012190 | None:intergenic |
| AGGCTGAAGATAGCAGATGG+TGG | 0.726832 | 8.4:+75005091 | MS.gene37340:CDS |
| AAATGGATTCATGATCATGG+TGG | 0.780001 | 8.4:+75017072 | MS.gene37340:CDS |
| ATAGAGATATATTTCCAACG+TGG | 0.793021 | 8.4:+75021631 | MS.gene37340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 75005085 | 75021698 | 75005085 | ID=MS.gene37340 |
| chr8.4 | mRNA | 75005085 | 75021698 | 75005085 | ID=MS.gene37340.t1;Parent=MS.gene37340 |
| chr8.4 | exon | 75005085 | 75005285 | 75005085 | ID=MS.gene37340.t1.exon1;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75005085 | 75005285 | 75005085 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| chr8.4 | exon | 75011694 | 75011879 | 75011694 | ID=MS.gene37340.t1.exon2;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75011694 | 75011879 | 75011694 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| chr8.4 | exon | 75012149 | 75012238 | 75012149 | ID=MS.gene37340.t1.exon3;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75012149 | 75012238 | 75012149 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| chr8.4 | exon | 75016937 | 75017134 | 75016937 | ID=MS.gene37340.t1.exon4;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75016937 | 75017134 | 75016937 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| chr8.4 | exon | 75017216 | 75017300 | 75017216 | ID=MS.gene37340.t1.exon5;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75017216 | 75017300 | 75017216 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| chr8.4 | exon | 75017415 | 75017581 | 75017415 | ID=MS.gene37340.t1.exon6;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75017415 | 75017581 | 75017415 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| chr8.4 | exon | 75017689 | 75017880 | 75017689 | ID=MS.gene37340.t1.exon7;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75017689 | 75017880 | 75017689 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| chr8.4 | exon | 75017956 | 75018069 | 75017956 | ID=MS.gene37340.t1.exon8;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75017956 | 75018069 | 75017956 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| chr8.4 | exon | 75018161 | 75018280 | 75018161 | ID=MS.gene37340.t1.exon9;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75018161 | 75018280 | 75018161 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| chr8.4 | exon | 75018845 | 75018967 | 75018845 | ID=MS.gene37340.t1.exon10;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75018845 | 75018967 | 75018845 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| chr8.4 | exon | 75019069 | 75019167 | 75019069 | ID=MS.gene37340.t1.exon11;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75019069 | 75019167 | 75019069 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| chr8.4 | exon | 75019880 | 75019936 | 75019880 | ID=MS.gene37340.t1.exon12;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75019880 | 75019936 | 75019880 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| chr8.4 | exon | 75020361 | 75020729 | 75020361 | ID=MS.gene37340.t1.exon13;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75020361 | 75020729 | 75020361 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| chr8.4 | exon | 75020825 | 75020905 | 75020825 | ID=MS.gene37340.t1.exon14;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75020825 | 75020905 | 75020825 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| chr8.4 | exon | 75021011 | 75021094 | 75021011 | ID=MS.gene37340.t1.exon15;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75021011 | 75021094 | 75021011 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| chr8.4 | exon | 75021582 | 75021698 | 75021582 | ID=MS.gene37340.t1.exon16;Parent=MS.gene37340.t1 |
| chr8.4 | CDS | 75021582 | 75021698 | 75021582 | ID=cds.MS.gene37340.t1;Parent=MS.gene37340.t1 |
| Gene Sequence |
| Protein sequence |
