Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37508.t1 | XP_013444995.1 | 91.1 | 326 | 28 | 1 | 1 | 325 | 1 | 326 | 1.70E-167 | 598.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37508.t1 | Q9LE33 | 53.9 | 323 | 142 | 4 | 4 | 324 | 3 | 320 | 1.7e-86 | 320.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37508.t1 | A0A072TZQ8 | 91.1 | 326 | 28 | 1 | 1 | 325 | 1 | 326 | 1.3e-167 | 598.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37508 | MS.gene065032 | PPI |
| MS.gene20783 | MS.gene37508 | PPI |
| MS.gene37508 | MS.gene068263 | PPI |
| MS.gene37508 | MS.gene24947 | PPI |
| MS.gene068259 | MS.gene37508 | PPI |
| MS.gene37508 | MS.gene07262 | PPI |
| MS.gene030057 | MS.gene37508 | PPI |
| MS.gene062351 | MS.gene37508 | PPI |
| MS.gene37508 | MS.gene76198 | PPI |
| MS.gene74946 | MS.gene37508 | PPI |
| MS.gene37508 | MS.gene37513 | PPI |
| MS.gene33395 | MS.gene37508 | PPI |
| MS.gene37508 | MS.gene20834 | PPI |
| MS.gene37508 | MS.gene068262 | PPI |
| MS.gene37508 | MS.gene33394 | PPI |
| MS.gene029300 | MS.gene37508 | PPI |
| MS.gene24945 | MS.gene37508 | PPI |
| MS.gene017129 | MS.gene37508 | PPI |
| MS.gene038363 | MS.gene37508 | PPI |
| MS.gene24946 | MS.gene37508 | PPI |
| MS.gene37508 | MS.gene33396 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37508.t1 | MTR_8g033410 | 91.104 | 326 | 28 | 1 | 1 | 325 | 1 | 326 | 0.0 | 611 |
| MS.gene37508.t1 | MTR_8g033400 | 80.556 | 324 | 62 | 1 | 2 | 325 | 11 | 333 | 0.0 | 533 |
| MS.gene37508.t1 | MTR_8g033390 | 59.190 | 321 | 130 | 1 | 6 | 325 | 3 | 323 | 2.25e-139 | 397 |
| MS.gene37508.t1 | MTR_7g075830 | 51.266 | 316 | 129 | 6 | 29 | 324 | 4 | 314 | 1.02e-102 | 304 |
| MS.gene37508.t1 | MTR_4g012960 | 42.434 | 304 | 167 | 2 | 22 | 325 | 15 | 310 | 1.79e-83 | 255 |
| MS.gene37508.t1 | MTR_4g013090 | 42.105 | 304 | 171 | 2 | 22 | 325 | 15 | 313 | 1.00e-82 | 253 |
| MS.gene37508.t1 | MTR_4g013100 | 40.391 | 307 | 172 | 3 | 22 | 325 | 16 | 314 | 6.10e-81 | 248 |
| MS.gene37508.t1 | MTR_2g101840 | 44.737 | 304 | 162 | 3 | 23 | 325 | 16 | 314 | 3.52e-79 | 244 |
| MS.gene37508.t1 | MTR_4g013135 | 40.065 | 307 | 173 | 3 | 22 | 325 | 15 | 313 | 3.84e-67 | 213 |
| MS.gene37508.t1 | MTR_3g005970 | 28.417 | 278 | 172 | 7 | 64 | 320 | 104 | 375 | 4.48e-27 | 109 |
| MS.gene37508.t1 | MTR_1g112510 | 27.344 | 256 | 166 | 2 | 85 | 320 | 94 | 349 | 2.58e-24 | 102 |
| MS.gene37508.t1 | MTR_4g005880 | 27.481 | 262 | 167 | 7 | 78 | 323 | 152 | 406 | 1.26e-18 | 87.0 |
| MS.gene37508.t1 | MTR_1g107480 | 27.237 | 257 | 168 | 7 | 78 | 324 | 119 | 366 | 2.06e-18 | 86.3 |
| MS.gene37508.t1 | MTR_6g007170 | 24.232 | 293 | 189 | 7 | 39 | 318 | 95 | 367 | 1.04e-14 | 74.7 |
| MS.gene37508.t1 | MTR_6g007175 | 23.958 | 288 | 177 | 7 | 39 | 318 | 64 | 317 | 1.16e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37508.t1 | AT2G45630 | 52.280 | 329 | 147 | 6 | 2 | 325 | 15 | 338 | 2.81e-112 | 329 |
| MS.gene37508.t1 | AT1G12550 | 53.870 | 323 | 142 | 4 | 4 | 324 | 3 | 320 | 4.08e-112 | 328 |
| MS.gene37508.t1 | AT1G79870 | 41.935 | 310 | 169 | 3 | 19 | 325 | 12 | 313 | 4.86e-80 | 246 |
| MS.gene37508.t1 | AT1G79870 | 39.739 | 307 | 161 | 3 | 19 | 325 | 12 | 294 | 9.98e-70 | 219 |
| MS.gene37508.t1 | AT2G45630 | 44.586 | 157 | 78 | 5 | 2 | 154 | 15 | 166 | 6.22e-33 | 120 |
| MS.gene37508.t1 | AT5G28310 | 39.175 | 194 | 66 | 3 | 133 | 325 | 91 | 233 | 1.42e-31 | 118 |
| MS.gene37508.t1 | AT1G72190 | 25.231 | 325 | 204 | 9 | 4 | 307 | 47 | 353 | 1.73e-28 | 113 |
| MS.gene37508.t1 | AT1G68010 | 27.734 | 256 | 165 | 2 | 85 | 320 | 94 | 349 | 1.91e-23 | 99.8 |
| MS.gene37508.t1 | AT1G68010 | 29.070 | 258 | 162 | 3 | 85 | 321 | 94 | 351 | 3.02e-23 | 99.0 |
| MS.gene37508.t1 | AT1G68010 | 27.626 | 257 | 165 | 3 | 85 | 320 | 94 | 350 | 8.29e-22 | 95.1 |
| MS.gene37508.t1 | AT1G17745 | 26.592 | 267 | 167 | 8 | 78 | 325 | 146 | 402 | 3.57e-19 | 88.6 |
| MS.gene37508.t1 | AT5G14780 | 25.170 | 294 | 193 | 7 | 39 | 322 | 79 | 355 | 6.14e-19 | 87.0 |
| MS.gene37508.t1 | AT5G14780 | 25.170 | 294 | 193 | 7 | 39 | 322 | 67 | 343 | 6.58e-19 | 86.7 |
| MS.gene37508.t1 | AT4G34200 | 26.953 | 256 | 170 | 6 | 78 | 324 | 125 | 372 | 7.01e-19 | 87.8 |
| MS.gene37508.t1 | AT5G14780 | 25.170 | 294 | 193 | 7 | 39 | 322 | 93 | 369 | 9.33e-19 | 86.7 |
| MS.gene37508.t1 | AT3G19480 | 27.451 | 255 | 170 | 6 | 78 | 324 | 110 | 357 | 6.10e-18 | 85.1 |
| MS.gene37508.t1 | AT1G17745 | 25.260 | 289 | 170 | 8 | 78 | 325 | 146 | 429 | 9.82e-16 | 78.6 |
Find 98 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAACTTGTGGAACAAAATT+TGG | 0.164622 | 8.3:+60278740 | MS.gene37508:CDS |
| TTCGGAGGATGTTGCTGATA+TGG | 0.291825 | 8.3:+60277121 | MS.gene37508:CDS |
| TTACTGGTGTTTCAGATATC+AGG | 0.305036 | 8.3:+60278273 | MS.gene37508:intron |
| GTGTCGGCGTCGGGGAATTC+AGG | 0.311339 | 8.3:+60277076 | MS.gene37508:CDS |
| GAGAAGATGGGTTTATGATA+TGG | 0.312632 | 8.3:-60276884 | None:intergenic |
| TTGAGATATCCGGGGAGTTC+GGG | 0.313544 | 8.3:-60276840 | None:intergenic |
| AGCTTCAGCCGCCTGCATAT+TGG | 0.325646 | 8.3:+60277207 | MS.gene37508:CDS |
| TCCTAAAGAGTTCTCTTCAT+TGG | 0.327313 | 8.3:+60278656 | MS.gene37508:CDS |
| TTTGAGATATCCGGGGAGTT+CGG | 0.328260 | 8.3:-60276841 | None:intergenic |
| CCTCGACGTGTGTCGGCGTC+GGG | 0.328540 | 8.3:+60277067 | MS.gene37508:CDS |
| GCTTCAGCCGCCTGCATATT+GGG | 0.332149 | 8.3:+60277208 | MS.gene37508:CDS |
| GGACCGTGAAAGAATACTTT+TGG | 0.335420 | 8.3:-60276816 | None:intergenic |
| CATCTCCGCCATTCTCTGTA+TGG | 0.338497 | 8.3:+60276956 | MS.gene37508:CDS |
| TGGAAGTTGTGAGAAGGTTT+GGG | 0.339589 | 8.3:-60276864 | None:intergenic |
| AATTCAATCAACTATATAAC+TGG | 0.342058 | 8.3:-60278795 | None:intergenic |
| TCCAATGAAGAGAACTCTTT+AGG | 0.349885 | 8.3:-60278657 | None:intergenic |
| TGAAGAGAGGGAAGAGAAGA+TGG | 0.355161 | 8.3:-60276897 | None:intergenic |
| ATGGAAGTTGTGAGAAGGTT+TGG | 0.357334 | 8.3:-60276865 | None:intergenic |
| TGATATGGCTGTGGCTTTGT+TGG | 0.364353 | 8.3:+60277136 | MS.gene37508:CDS |
| TGAGATTGGAGGTGCTGGTT+TGG | 0.372193 | 8.3:+60278608 | MS.gene37508:CDS |
| AGGGAGAAGGTGGAGAATTT+CGG | 0.376049 | 8.3:-60276997 | None:intergenic |
| AGGTTTGGGTTTGAGATATC+CGG | 0.377280 | 8.3:-60276850 | None:intergenic |
| AAAGATTGGAATTGTTGGTC+TGG | 0.384913 | 8.3:+60278299 | MS.gene37508:CDS |
| ACAGAAGTCATGTTGGCATT+AGG | 0.391006 | 8.3:+60278507 | MS.gene37508:CDS |
| GGAATTCAGGTCGCCAATGC+TGG | 0.417890 | 8.3:+60277089 | MS.gene37508:CDS |
| CTTAACTTTAGAGTCACATA+TGG | 0.419907 | 8.3:+60278710 | MS.gene37508:CDS |
| GAGGTCAATGTGATTAGTTC+CGG | 0.424802 | 8.3:-60277048 | None:intergenic |
| ATTGTTGGTCTGGGAAGAAT+TGG | 0.427657 | 8.3:+60278309 | MS.gene37508:CDS |
| AGGTGCTCTCATTGATGAAA+AGG | 0.435320 | 8.3:+60278560 | MS.gene37508:CDS |
| TGTTTGATTGAAAATGAGAT+TGG | 0.437530 | 8.3:+60278594 | MS.gene37508:CDS |
| CTCCCAAAAGTATTCTTTCA+CGG | 0.439453 | 8.3:+60276813 | MS.gene37508:CDS |
| TGGGAGATTCTTTGTTTCAT+CGG | 0.451982 | 8.3:-60276796 | None:intergenic |
| TCTAACACAGTGGAATAGTA+AGG | 0.453055 | 8.3:-60278414 | None:intergenic |
| AAGATTGGAATTGTTGGTCT+GGG | 0.454839 | 8.3:+60278300 | MS.gene37508:CDS |
| TGTTGACAATGTGCCTCGTT+TGG | 0.459122 | 8.3:-60278485 | None:intergenic |
| ATCTCCGCCATTCTCTGTAT+GGG | 0.461637 | 8.3:+60276957 | MS.gene37508:CDS |
| GCAAAGAGGCTTGAAACATT+CGG | 0.463871 | 8.3:+60278342 | MS.gene37508:CDS |
| GAAGCTGTCTTCTCAAGAAC+CGG | 0.468027 | 8.3:-60277190 | None:intergenic |
| ACCTCGACGTGTGTCGGCGT+CGG | 0.475926 | 8.3:+60277066 | MS.gene37508:CDS |
| GGAAGCGTTGTGAGGGTTGG+TGG | 0.478456 | 8.3:-60276931 | None:intergenic |
| CATACAGAGAATGGCGGAGA+TGG | 0.484443 | 8.3:-60276955 | None:intergenic |
| GGTTTGGGTTTGAGATATCC+GGG | 0.484535 | 8.3:-60276849 | None:intergenic |
| GAAGAGAGGGAAGAGAAGAT+GGG | 0.500439 | 8.3:-60276896 | None:intergenic |
| GTGGCTTTGTTGGTTGATGT+TGG | 0.505017 | 8.3:+60277146 | MS.gene37508:CDS |
| TAGTAAGGGTACGAAACTAA+TGG | 0.505628 | 8.3:-60278399 | None:intergenic |
| GAAAATGAGATTGGAGGTGC+TGG | 0.505907 | 8.3:+60278603 | MS.gene37508:CDS |
| TTCATCATGACCTCCAGTGC+CGG | 0.509827 | 8.3:+60277029 | MS.gene37508:CDS |
| CACTGGAGGTCATGATGAAA+CGG | 0.512733 | 8.3:-60277025 | None:intergenic |
| GGCGGAATCATAGTGAATGT+TGG | 0.516959 | 8.3:+60278534 | MS.gene37508:CDS |
| GAGGGTTGGTGGATATGAAT+TGG | 0.520395 | 8.3:-60276920 | None:intergenic |
| AATGTGATTAGTTCCGGCAC+TGG | 0.522357 | 8.3:-60277042 | None:intergenic |
| GCATGATATCATACAACTCT+CGG | 0.528430 | 8.3:+60278367 | MS.gene37508:CDS |
| TATGGGTATCTGCCAACTTG+TGG | 0.528506 | 8.3:+60278728 | MS.gene37508:CDS |
| CTTTGTTGGTTGATGTTGGT+AGG | 0.535021 | 8.3:+60277150 | MS.gene37508:CDS |
| TTAACTTTAGAGTCACATAT+GGG | 0.535166 | 8.3:+60278711 | MS.gene37508:CDS |
| GTCATGTTGGCATTAGGAAA+AGG | 0.535996 | 8.3:+60278513 | MS.gene37508:CDS |
| GTCATGATGAAACGGAGGCA+AGG | 0.537685 | 8.3:-60277017 | None:intergenic |
| GGAGGAAGCGTTGTGAGGGT+TGG | 0.539878 | 8.3:-60276934 | None:intergenic |
| GGAAGATTTCAGCTGCGGAC+CGG | 0.546304 | 8.3:+60277171 | MS.gene37508:CDS |
| CACGGTCCACCCGAACTCCC+CGG | 0.553004 | 8.3:+60276831 | MS.gene37508:CDS |
| TCATGATGAAACGGAGGCAA+GGG | 0.556509 | 8.3:-60277016 | None:intergenic |
| AGTGGAAAATCCCAATATGC+AGG | 0.558303 | 8.3:-60277218 | None:intergenic |
| ACAGAGAATGGCGGAGATGG+AGG | 0.560373 | 8.3:-60276952 | None:intergenic |
| AGATATCCGGGGAGTTCGGG+TGG | 0.564287 | 8.3:-60276837 | None:intergenic |
| TTGATTGAAAATGAGATTGG+AGG | 0.564611 | 8.3:+60278597 | MS.gene37508:CDS |
| GTAGAGACCCATACAGAGAA+TGG | 0.566297 | 8.3:-60276964 | None:intergenic |
| GGAGAATTTCGGCGTTGAGA+GGG | 0.572565 | 8.3:-60276986 | None:intergenic |
| ATCATAGTGAATGTTGGAAG+AGG | 0.578453 | 8.3:+60278540 | MS.gene37508:CDS |
| ATGATATGGAAGTTGTGAGA+AGG | 0.580179 | 8.3:-60276870 | None:intergenic |
| GTGATTAGTTCCGGCACTGG+AGG | 0.582358 | 8.3:-60277039 | None:intergenic |
| AGATGGAGGAAGCGTTGTGA+GGG | 0.583632 | 8.3:-60276938 | None:intergenic |
| TGAAACGGAGGCAAGGGAGA+AGG | 0.587990 | 8.3:-60277010 | None:intergenic |
| GATATGAATTGGTGAAGAGA+GGG | 0.589096 | 8.3:-60276909 | None:intergenic |
| AACGGAGGCAAGGGAGAAGG+TGG | 0.589396 | 8.3:-60277007 | None:intergenic |
| GGATGTTGCTGATATGGCTG+TGG | 0.591447 | 8.3:+60277127 | MS.gene37508:CDS |
| AGACAGCTGCATGAGGTGAA+AGG | 0.593691 | 8.3:-60278689 | None:intergenic |
| TGGAGAATTTCGGCGTTGAG+AGG | 0.594027 | 8.3:-60276987 | None:intergenic |
| ACATTGACCTCGACGTGTGT+CGG | 0.597975 | 8.3:+60277060 | MS.gene37508:CDS |
| GAGAACTCTTTAGGAACATG+AGG | 0.603433 | 8.3:-60278648 | None:intergenic |
| TATATAACTGGAGTAATCAG+AGG | 0.619006 | 8.3:-60278783 | None:intergenic |
| GAGATGGAGGAAGCGTTGTG+AGG | 0.625480 | 8.3:-60276939 | None:intergenic |
| GGATATGAATTGGTGAAGAG+AGG | 0.625518 | 8.3:-60276910 | None:intergenic |
| GTGATTTAAACGACCAAACG+AGG | 0.626563 | 8.3:+60278472 | MS.gene37508:CDS |
| CTAACACAGTGGAATAGTAA+GGG | 0.627854 | 8.3:-60278413 | None:intergenic |
| TTGCAGACCTTAGAACCAAG+TGG | 0.630404 | 8.3:-60277236 | None:intergenic |
| CTCGACGTGTGTCGGCGTCG+GGG | 0.632956 | 8.3:+60277068 | MS.gene37508:CDS |
| TGGTAGGAAGATTTCAGCTG+CGG | 0.633217 | 8.3:+60277166 | MS.gene37508:CDS |
| TGTCAACACAGAAGTCATGT+TGG | 0.641258 | 8.3:+60278500 | MS.gene37508:CDS |
| TTGGCTTAGAAGTTGCAAAG+AGG | 0.643774 | 8.3:+60278328 | MS.gene37508:CDS |
| AAAGTTAAGACAGCTGCATG+AGG | 0.654646 | 8.3:-60278696 | None:intergenic |
| GGAAAATCCCAATATGCAGG+CGG | 0.679406 | 8.3:-60277215 | None:intergenic |
| ATGTTGGCATTAGGAAAAGG+CGG | 0.693207 | 8.3:+60278516 | MS.gene37508:CDS |
| ACAACAGAGAATGAGTACAC+TGG | 0.694649 | 8.3:-60278451 | None:intergenic |
| TGGAGGTCATGATGAAACGG+AGG | 0.697117 | 8.3:-60277022 | None:intergenic |
| GTTTGGGTTTGAGATATCCG+GGG | 0.699938 | 8.3:-60276848 | None:intergenic |
| GAGACCCATACAGAGAATGG+CGG | 0.703371 | 8.3:-60276961 | None:intergenic |
| CCCGACGCCGACACACGTCG+AGG | 0.714708 | 8.3:-60277067 | None:intergenic |
| TGTTGCAAGCTCTAACACAG+TGG | 0.748331 | 8.3:-60278424 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAGTAGATTATCAAAAA+TGG | - | chr8.3:60277920-60277939 | None:intergenic | 15.0% |
| !!! | AAAATAGATATGTTTTTTGA+AGG | - | chr8.3:60277830-60277849 | None:intergenic | 15.0% |
| !! | ATTAATGATAAACTGAATGA+TGG | + | chr8.3:60277529-60277548 | MS.gene37508:intron | 20.0% |
| !! | GTAGTGTTTGATAAAATTAA+CGG | + | chr8.3:60277576-60277595 | MS.gene37508:intron | 20.0% |
| !! | TTTGAAAGTTAAGATAACTA+TGG | + | chr8.3:60277691-60277710 | MS.gene37508:intron | 20.0% |
| !!! | TTTGATAATAAACATGTTAC+TGG | + | chr8.3:60278257-60278276 | MS.gene37508:intron | 20.0% |
| ! | CTTAGCTTATATTTATTCTC+TGG | + | chr8.3:60277946-60277965 | MS.gene37508:intron | 25.0% |
| ! | TCAAAAATGGCTATAAGATT+TGG | - | chr8.3:60277907-60277926 | None:intergenic | 25.0% |
| ! | TGTTTGATTGAAAATGAGAT+TGG | + | chr8.3:60278594-60278613 | MS.gene37508:CDS | 25.0% |
| !! | ATCAAAGTTGTCTTTTCAAA+TGG | + | chr8.3:60277483-60277502 | MS.gene37508:intron | 25.0% |
| !!! | CAATGCTGGAAATATTTTTT+CGG | + | chr8.3:60277103-60277122 | MS.gene37508:CDS | 25.0% |
| !!! | GGGAAAAACATATTTTGATA+GGG | + | chr8.3:60278138-60278157 | MS.gene37508:intron | 25.0% |
| !!! | TTAACTTTAGAGTCACATAT+GGG | + | chr8.3:60278711-60278730 | MS.gene37508:CDS | 25.0% |
| AAGGTGAATTTCTAACTACT+AGG | - | chr8.3:60278057-60278076 | None:intergenic | 30.0% | |
| AATTTCAAGGTCATAGAAGA+TGG | - | chr8.3:60277879-60277898 | None:intergenic | 30.0% | |
| ACATTTGAACAACAAGTACA+TGG | - | chr8.3:60277322-60277341 | None:intergenic | 30.0% | |
| CACATGATGTTAGAAAAACA+AGG | + | chr8.3:60277454-60277473 | MS.gene37508:intron | 30.0% | |
| CAGATATCAGGAAAAAAGAT+TGG | + | chr8.3:60278285-60278304 | MS.gene37508:intron | 30.0% | |
| CGAAAAAATATTTCCAGCAT+TGG | - | chr8.3:60277105-60277124 | None:intergenic | 30.0% | |
| GGAAAAAAGATTGGAATTGT+TGG | + | chr8.3:60278294-60278313 | MS.gene37508:CDS | 30.0% | |
| TATATAACTGGAGTAATCAG+AGG | - | chr8.3:60278786-60278805 | None:intergenic | 30.0% | |
| TTGATTGAAAATGAGATTGG+AGG | + | chr8.3:60278597-60278616 | MS.gene37508:CDS | 30.0% | |
| ! | AAATGGCTATAAGATTTGGT+TGG | - | chr8.3:60277903-60277922 | None:intergenic | 30.0% |
| ! | CATGTCTATTTTCATACTAG+TGG | - | chr8.3:60278194-60278213 | None:intergenic | 30.0% |
| ! | TCATACTAGTGGCATTTTAA+AGG | - | chr8.3:60278183-60278202 | None:intergenic | 30.0% |
| !! | AGATTTGGTTGGTAATTTCA+AGG | - | chr8.3:60277892-60277911 | None:intergenic | 30.0% |
| !! | CTTAACTTTAGAGTCACATA+TGG | + | chr8.3:60278710-60278729 | MS.gene37508:CDS | 30.0% |
| !!! | GGGGAAAAACATATTTTGAT+AGG | + | chr8.3:60278137-60278156 | MS.gene37508:intron | 30.0% |
| AAAGATTGGAATTGTTGGTC+TGG | + | chr8.3:60278299-60278318 | MS.gene37508:CDS | 35.0% | |
| ATCATAGTGAATGTTGGAAG+AGG | + | chr8.3:60278540-60278559 | MS.gene37508:CDS | 35.0% | |
| ATGATATGGAAGTTGTGAGA+AGG | - | chr8.3:60276873-60276892 | None:intergenic | 35.0% | |
| CATGTGAGTATGAGACAAAA+TGG | - | chr8.3:60277440-60277459 | None:intergenic | 35.0% | |
| CCAACTTGTGGAACAAAATT+TGG | + | chr8.3:60278740-60278759 | MS.gene37508:CDS | 35.0% | |
| CTAACACAGTGGAATAGTAA+GGG | - | chr8.3:60278416-60278435 | None:intergenic | 35.0% | |
| CTCCATTAGACAAAAAGTAG+CGG | + | chr8.3:60277349-60277368 | MS.gene37508:intron | 35.0% | |
| GATATGAATTGGTGAAGAGA+GGG | - | chr8.3:60276912-60276931 | None:intergenic | 35.0% | |
| GCATGATATCATACAACTCT+CGG | + | chr8.3:60278367-60278386 | MS.gene37508:CDS | 35.0% | |
| TCACTTATTCACTATTCGCT+AGG | - | chr8.3:60277386-60277405 | None:intergenic | 35.0% | |
| TCCAATGAAGAGAACTCTTT+AGG | - | chr8.3:60278660-60278679 | None:intergenic | 35.0% | |
| TCCTAAAGAGTTCTCTTCAT+TGG | + | chr8.3:60278656-60278675 | MS.gene37508:CDS | 35.0% | |
| TCTAACACAGTGGAATAGTA+AGG | - | chr8.3:60278417-60278436 | None:intergenic | 35.0% | |
| TTACTGGTGTTTCAGATATC+AGG | + | chr8.3:60278273-60278292 | MS.gene37508:intron | 35.0% | |
| ! | AAGATTGGAATTGTTGGTCT+GGG | + | chr8.3:60278300-60278319 | MS.gene37508:CDS | 35.0% |
| ! | CCAAATTTTGTTCCACAAGT+TGG | - | chr8.3:60278743-60278762 | None:intergenic | 35.0% |
| ! | GACCGTGAAAGAATACTTTT+GGG | - | chr8.3:60276818-60276837 | None:intergenic | 35.0% |
| ! | GAGAAGATGGGTTTATGATA+TGG | - | chr8.3:60276887-60276906 | None:intergenic | 35.0% |
| ! | TAGTAAGGGTACGAAACTAA+TGG | - | chr8.3:60278402-60278421 | None:intergenic | 35.0% |
| ! | TGGGAGATTCTTTGTTTCAT+CGG | - | chr8.3:60276799-60276818 | None:intergenic | 35.0% |
| !! | CTAGTGGCATTTTAAAGGTA+AGG | - | chr8.3:60278178-60278197 | None:intergenic | 35.0% |
| !! | CTCCCAAAAGTATTCTTTCA+CGG | + | chr8.3:60276813-60276832 | MS.gene37508:CDS | 35.0% |
| !!! | ATCCGCTACTTTTTGTCTAA+TGG | - | chr8.3:60277354-60277373 | None:intergenic | 35.0% |
| !!! | TGCTGGAAATATTTTTTCGG+AGG | + | chr8.3:60277106-60277125 | MS.gene37508:CDS | 35.0% |
| AAAGTTAAGACAGCTGCATG+AGG | - | chr8.3:60278699-60278718 | None:intergenic | 40.0% | |
| ACAACAGAGAATGAGTACAC+TGG | - | chr8.3:60278454-60278473 | None:intergenic | 40.0% | |
| ACAGAAGTCATGTTGGCATT+AGG | + | chr8.3:60278507-60278526 | MS.gene37508:CDS | 40.0% | |
| ACCAACTTGATCTAAGCTCT+TGG | + | chr8.3:60278102-60278121 | MS.gene37508:intron | 40.0% | |
| AGCTCTTGGAGACTTATTCT+CGG | + | chr8.3:60278116-60278135 | MS.gene37508:intron | 40.0% | |
| AGGTGCTCTCATTGATGAAA+AGG | + | chr8.3:60278560-60278579 | MS.gene37508:CDS | 40.0% | |
| AGTGGAAAATCCCAATATGC+AGG | - | chr8.3:60277221-60277240 | None:intergenic | 40.0% | |
| ATGGAAGTTGTGAGAAGGTT+TGG | - | chr8.3:60276868-60276887 | None:intergenic | 40.0% | |
| ATGTTGGCATTAGGAAAAGG+CGG | + | chr8.3:60278516-60278535 | MS.gene37508:CDS | 40.0% | |
| GCAAAGAGGCTTGAAACATT+CGG | + | chr8.3:60278342-60278361 | MS.gene37508:CDS | 40.0% | |
| GGATATGAATTGGTGAAGAG+AGG | - | chr8.3:60276913-60276932 | None:intergenic | 40.0% | |
| GTCATGTTGGCATTAGGAAA+AGG | + | chr8.3:60278513-60278532 | MS.gene37508:CDS | 40.0% | |
| GTGAGTATGAGACAAAATGG+TGG | - | chr8.3:60277437-60277456 | None:intergenic | 40.0% | |
| GTGATTTAAACGACCAAACG+AGG | + | chr8.3:60278472-60278491 | MS.gene37508:CDS | 40.0% | |
| TCCAAGAGCTTAGATCAAGT+TGG | - | chr8.3:60278106-60278125 | None:intergenic | 40.0% | |
| TGGAAGTTGTGAGAAGGTTT+GGG | - | chr8.3:60276867-60276886 | None:intergenic | 40.0% | |
| TGTCAACACAGAAGTCATGT+TGG | + | chr8.3:60278500-60278519 | MS.gene37508:CDS | 40.0% | |
| TTGGCTTAGAAGTTGCAAAG+AGG | + | chr8.3:60278328-60278347 | MS.gene37508:CDS | 40.0% | |
| ! | AGGTTTGGGTTTGAGATATC+CGG | - | chr8.3:60276853-60276872 | None:intergenic | 40.0% |
| ! | ATTGTTGGTCTGGGAAGAAT+TGG | + | chr8.3:60278309-60278328 | MS.gene37508:CDS | 40.0% |
| ! | CTTTGTTGGTTGATGTTGGT+AGG | + | chr8.3:60277150-60277169 | MS.gene37508:CDS | 40.0% |
| ! | GAGAACTCTTTAGGAACATG+AGG | - | chr8.3:60278651-60278670 | None:intergenic | 40.0% |
| ! | GAGGTCAATGTGATTAGTTC+CGG | - | chr8.3:60277051-60277070 | None:intergenic | 40.0% |
| ! | GCATATTGGGATTTTCCACT+TGG | + | chr8.3:60277221-60277240 | MS.gene37508:CDS | 40.0% |
| ! | GGACCGTGAAAGAATACTTT+TGG | - | chr8.3:60276819-60276838 | None:intergenic | 40.0% |
| !!! | CGCTACTTTTTGTCTAATGG+AGG | - | chr8.3:60277351-60277370 | None:intergenic | 40.0% |
| !!! | GGATTTTCCACTTGGTTCTA+AGG | + | chr8.3:60277229-60277248 | MS.gene37508:CDS | 40.0% |
| AGGGAGAAGGTGGAGAATTT+CGG | - | chr8.3:60277000-60277019 | None:intergenic | 45.0% | |
| ATCTCCGCCATTCTCTGTAT+GGG | + | chr8.3:60276957-60276976 | MS.gene37508:CDS | 45.0% | |
| CACTGGAGGTCATGATGAAA+CGG | - | chr8.3:60277028-60277047 | None:intergenic | 45.0% | |
| CTCTTGGAGACTTATTCTCG+GGG | + | chr8.3:60278118-60278137 | MS.gene37508:intron | 45.0% | |
| GAAGAGAGGGAAGAGAAGAT+GGG | - | chr8.3:60276899-60276918 | None:intergenic | 45.0% | |
| GAAGCTGTCTTCTCAAGAAC+CGG | - | chr8.3:60277193-60277212 | None:intergenic | 45.0% | |
| GCTCTTGGAGACTTATTCTC+GGG | + | chr8.3:60278117-60278136 | MS.gene37508:intron | 45.0% | |
| GGAAAATCCCAATATGCAGG+CGG | - | chr8.3:60277218-60277237 | None:intergenic | 45.0% | |
| GGCGGAATCATAGTGAATGT+TGG | + | chr8.3:60278534-60278553 | MS.gene37508:CDS | 45.0% | |
| GTAGAGACCCATACAGAGAA+TGG | - | chr8.3:60276967-60276986 | None:intergenic | 45.0% | |
| TATGGGTATCTGCCAACTTG+TGG | + | chr8.3:60278728-60278747 | MS.gene37508:CDS | 45.0% | |
| TCATGATGAAACGGAGGCAA+GGG | - | chr8.3:60277019-60277038 | None:intergenic | 45.0% | |
| TGAAGAGAGGGAAGAGAAGA+TGG | - | chr8.3:60276900-60276919 | None:intergenic | 45.0% | |
| TGGTAGGAAGATTTCAGCTG+CGG | + | chr8.3:60277166-60277185 | MS.gene37508:CDS | 45.0% | |
| TGTTGACAATGTGCCTCGTT+TGG | - | chr8.3:60278488-60278507 | None:intergenic | 45.0% | |
| TTCGGAGGATGTTGCTGATA+TGG | + | chr8.3:60277121-60277140 | MS.gene37508:CDS | 45.0% | |
| TTGCAGACCTTAGAACCAAG+TGG | - | chr8.3:60277239-60277258 | None:intergenic | 45.0% | |
| ! | AATGTGATTAGTTCCGGCAC+TGG | - | chr8.3:60277045-60277064 | None:intergenic | 45.0% |
| ! | GAAAATGAGATTGGAGGTGC+TGG | + | chr8.3:60278603-60278622 | MS.gene37508:CDS | 45.0% |
| ! | GGTTTGGGTTTGAGATATCC+GGG | - | chr8.3:60276852-60276871 | None:intergenic | 45.0% |
| ! | GTTTGGGTTTGAGATATCCG+GGG | - | chr8.3:60276851-60276870 | None:intergenic | 45.0% |
| ! | TGTTGCAAGCTCTAACACAG+TGG | - | chr8.3:60278427-60278446 | None:intergenic | 45.0% |
| ! | TTTGAGATATCCGGGGAGTT+CGG | - | chr8.3:60276844-60276863 | None:intergenic | 45.0% |
| !! | GAGGGTTGGTGGATATGAAT+TGG | - | chr8.3:60276923-60276942 | None:intergenic | 45.0% |
| !! | GTGGCTTTGTTGGTTGATGT+TGG | + | chr8.3:60277146-60277165 | MS.gene37508:CDS | 45.0% |
| !! | TGATATGGCTGTGGCTTTGT+TGG | + | chr8.3:60277136-60277155 | MS.gene37508:CDS | 45.0% |
| !! | ATTGTAAAATATATTTAAAA+AGG | - | chr8.3:60278076-60278095 | None:intergenic | 5.0% |
| ACATTGACCTCGACGTGTGT+CGG | + | chr8.3:60277060-60277079 | MS.gene37508:CDS | 50.0% | |
| AGACAGCTGCATGAGGTGAA+AGG | - | chr8.3:60278692-60278711 | None:intergenic | 50.0% | |
| CATCTCCGCCATTCTCTGTA+TGG | + | chr8.3:60276956-60276975 | MS.gene37508:CDS | 50.0% | |
| GAGACCCATACAGAGAATGG+CGG | - | chr8.3:60276964-60276983 | None:intergenic | 50.0% | |
| GGATGTTGCTGATATGGCTG+TGG | + | chr8.3:60277127-60277146 | MS.gene37508:CDS | 50.0% | |
| GTCATGATGAAACGGAGGCA+AGG | - | chr8.3:60277020-60277039 | None:intergenic | 50.0% | |
| TGGAGGTCATGATGAAACGG+AGG | - | chr8.3:60277025-60277044 | None:intergenic | 50.0% | |
| TTCATCATGACCTCCAGTGC+CGG | + | chr8.3:60277029-60277048 | MS.gene37508:CDS | 50.0% | |
| TTGAGATATCCGGGGAGTTC+GGG | - | chr8.3:60276843-60276862 | None:intergenic | 50.0% | |
| ! | CATACAGAGAATGGCGGAGA+TGG | - | chr8.3:60276958-60276977 | None:intergenic | 50.0% |
| ! | GGAGAATTTCGGCGTTGAGA+GGG | - | chr8.3:60276989-60277008 | None:intergenic | 50.0% |
| ! | TGGAGAATTTCGGCGTTGAG+AGG | - | chr8.3:60276990-60277009 | None:intergenic | 50.0% |
| !! | AGATGGAGGAAGCGTTGTGA+GGG | - | chr8.3:60276941-60276960 | None:intergenic | 50.0% |
| !! | TGAGATTGGAGGTGCTGGTT+TGG | + | chr8.3:60278608-60278627 | MS.gene37508:CDS | 50.0% |
| AGCTTCAGCCGCCTGCATAT+TGG | + | chr8.3:60277207-60277226 | MS.gene37508:CDS | 55.0% | |
| GCTTCAGCCGCCTGCATATT+GGG | + | chr8.3:60277208-60277227 | MS.gene37508:CDS | 55.0% | |
| GGAAGATTTCAGCTGCGGAC+CGG | + | chr8.3:60277171-60277190 | MS.gene37508:CDS | 55.0% | |
| GGAATTCAGGTCGCCAATGC+TGG | + | chr8.3:60277089-60277108 | MS.gene37508:CDS | 55.0% | |
| TGAAACGGAGGCAAGGGAGA+AGG | - | chr8.3:60277013-60277032 | None:intergenic | 55.0% | |
| ! | ACAGAGAATGGCGGAGATGG+AGG | - | chr8.3:60276955-60276974 | None:intergenic | 55.0% |
| ! | GTGATTAGTTCCGGCACTGG+AGG | - | chr8.3:60277042-60277061 | None:intergenic | 55.0% |
| !! | GAGATGGAGGAAGCGTTGTG+AGG | - | chr8.3:60276942-60276961 | None:intergenic | 55.0% |
| AACGGAGGCAAGGGAGAAGG+TGG | - | chr8.3:60277010-60277029 | None:intergenic | 60.0% | |
| AGATATCCGGGGAGTTCGGG+TGG | - | chr8.3:60276840-60276859 | None:intergenic | 60.0% | |
| !! | GGAAGCGTTGTGAGGGTTGG+TGG | - | chr8.3:60276934-60276953 | None:intergenic | 60.0% |
| !! | GGAGGAAGCGTTGTGAGGGT+TGG | - | chr8.3:60276937-60276956 | None:intergenic | 60.0% |
| ! | ACCTCGACGTGTGTCGGCGT+CGG | + | chr8.3:60277066-60277085 | MS.gene37508:CDS | 65.0% |
| ! | GTGTCGGCGTCGGGGAATTC+AGG | + | chr8.3:60277076-60277095 | MS.gene37508:CDS | 65.0% |
| CACGGTCCACCCGAACTCCC+CGG | + | chr8.3:60276831-60276850 | MS.gene37508:CDS | 70.0% | |
| ! | CCTCGACGTGTGTCGGCGTC+GGG | + | chr8.3:60277067-60277086 | MS.gene37508:CDS | 70.0% |
| ! | CTCGACGTGTGTCGGCGTCG+GGG | + | chr8.3:60277068-60277087 | MS.gene37508:CDS | 70.0% |
| CCCGACGCCGACACACGTCG+AGG | - | chr8.3:60277070-60277089 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 60276792 | 60278806 | 60276792 | ID=MS.gene37508 |
| chr8.3 | mRNA | 60276792 | 60278806 | 60276792 | ID=MS.gene37508.t1;Parent=MS.gene37508 |
| chr8.3 | exon | 60276792 | 60277250 | 60276792 | ID=MS.gene37508.t1.exon1;Parent=MS.gene37508.t1 |
| chr8.3 | CDS | 60276792 | 60277250 | 60276792 | ID=cds.MS.gene37508.t1;Parent=MS.gene37508.t1 |
| chr8.3 | exon | 60278288 | 60278806 | 60278288 | ID=MS.gene37508.t1.exon2;Parent=MS.gene37508.t1 |
| chr8.3 | CDS | 60278288 | 60278806 | 60278288 | ID=cds.MS.gene37508.t1;Parent=MS.gene37508.t1 |
| Gene Sequence |
| Protein sequence |
