Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029300.t1 | XP_013470313.1 | 99.5 | 386 | 2 | 0 | 1 | 386 | 1 | 386 | 4.40E-218 | 766.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029300.t1 | P13443 | 90.5 | 379 | 36 | 0 | 1 | 379 | 1 | 379 | 1.9e-201 | 703.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029300.t1 | A0A072VRS6 | 99.5 | 386 | 2 | 0 | 1 | 386 | 1 | 386 | 3.2e-218 | 766.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029300 | MS.gene019404 | PPI |
| MS.gene019406 | MS.gene029300 | PPI |
| MS.gene032779 | MS.gene029300 | PPI |
| MS.gene24946 | MS.gene029300 | PPI |
| MS.gene068259 | MS.gene029300 | PPI |
| MS.gene23633 | MS.gene029300 | PPI |
| MS.gene029300 | MS.gene37512 | PPI |
| MS.gene029300 | MS.gene24945 | PPI |
| MS.gene33395 | MS.gene029300 | PPI |
| MS.gene066288 | MS.gene029300 | PPI |
| MS.gene029300 | MS.gene87846 | PPI |
| MS.gene99026 | MS.gene029300 | PPI |
| MS.gene029300 | MS.gene33396 | PPI |
| MS.gene029300 | MS.gene019405 | PPI |
| MS.gene029300 | MS.gene37508 | PPI |
| MS.gene029300 | MS.gene87848 | PPI |
| MS.gene029300 | MS.gene87842 | PPI |
| MS.gene029300 | MS.gene068263 | PPI |
| MS.gene029300 | MS.gene37515 | PPI |
| MS.gene029300 | MS.gene49595 | PPI |
| MS.gene23623 | MS.gene029300 | PPI |
| MS.gene029300 | MS.gene24947 | PPI |
| MS.gene029300 | MS.gene019402 | PPI |
| MS.gene029300 | MS.gene23624 | PPI |
| MS.gene029300 | MS.gene068262 | PPI |
| MS.gene029300 | MS.gene33394 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029300.t1 | MTR_1g112510 | 99.482 | 386 | 2 | 0 | 1 | 386 | 1 | 386 | 0.0 | 792 |
| MS.gene029300.t1 | MTR_4g012960 | 33.448 | 290 | 166 | 5 | 60 | 349 | 43 | 305 | 2.10e-39 | 142 |
| MS.gene029300.t1 | MTR_4g013090 | 33.798 | 287 | 160 | 7 | 66 | 349 | 49 | 308 | 7.02e-39 | 141 |
| MS.gene029300.t1 | MTR_4g013100 | 32.990 | 291 | 169 | 6 | 60 | 349 | 44 | 309 | 2.18e-37 | 137 |
| MS.gene029300.t1 | MTR_4g005880 | 34.228 | 298 | 173 | 7 | 50 | 346 | 117 | 392 | 4.55e-35 | 136 |
| MS.gene029300.t1 | MTR_1g107480 | 33.564 | 289 | 162 | 8 | 63 | 346 | 96 | 359 | 1.68e-29 | 120 |
| MS.gene029300.t1 | MTR_4g013135 | 32.990 | 291 | 169 | 7 | 60 | 349 | 43 | 308 | 7.22e-27 | 109 |
| MS.gene029300.t1 | MTR_8g033410 | 27.344 | 256 | 166 | 2 | 94 | 349 | 86 | 321 | 9.05e-27 | 109 |
| MS.gene029300.t1 | MTR_8g033400 | 27.419 | 248 | 157 | 4 | 94 | 340 | 94 | 319 | 1.16e-26 | 108 |
| MS.gene029300.t1 | MTR_8g033390 | 28.571 | 259 | 151 | 8 | 94 | 347 | 83 | 312 | 3.13e-26 | 107 |
| MS.gene029300.t1 | MTR_2g101840 | 29.771 | 262 | 157 | 3 | 91 | 349 | 72 | 309 | 8.60e-25 | 103 |
| MS.gene029300.t1 | MTR_6g007170 | 26.809 | 235 | 151 | 6 | 94 | 325 | 129 | 345 | 3.54e-11 | 64.7 |
| MS.gene029300.t1 | MTR_7g078990 | 24.364 | 275 | 181 | 7 | 100 | 365 | 88 | 344 | 8.61e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029300.t1 | AT1G68010 | 88.860 | 386 | 43 | 0 | 1 | 386 | 1 | 386 | 0.0 | 697 |
| MS.gene029300.t1 | AT1G68010 | 88.630 | 387 | 43 | 1 | 1 | 386 | 1 | 387 | 0.0 | 692 |
| MS.gene029300.t1 | AT1G68010 | 90.909 | 341 | 31 | 0 | 1 | 341 | 1 | 341 | 0.0 | 625 |
| MS.gene029300.t1 | AT4G34200 | 34.737 | 285 | 164 | 6 | 63 | 346 | 102 | 365 | 7.21e-34 | 132 |
| MS.gene029300.t1 | AT1G17745 | 32.558 | 344 | 192 | 11 | 10 | 346 | 76 | 386 | 1.38e-33 | 132 |
| MS.gene029300.t1 | AT1G79870 | 31.373 | 306 | 172 | 8 | 45 | 346 | 34 | 305 | 7.71e-33 | 125 |
| MS.gene029300.t1 | AT3G19480 | 33.221 | 298 | 176 | 7 | 50 | 346 | 75 | 350 | 1.68e-30 | 123 |
| MS.gene029300.t1 | AT1G17745 | 30.435 | 368 | 195 | 11 | 10 | 346 | 76 | 413 | 6.81e-29 | 119 |
| MS.gene029300.t1 | AT1G79870 | 29.180 | 305 | 161 | 7 | 45 | 346 | 34 | 286 | 6.64e-27 | 108 |
| MS.gene029300.t1 | AT1G12550 | 27.413 | 259 | 163 | 5 | 94 | 350 | 82 | 317 | 8.47e-26 | 106 |
| MS.gene029300.t1 | AT2G45630 | 25.723 | 311 | 201 | 6 | 39 | 347 | 45 | 327 | 1.05e-23 | 100 |
| MS.gene029300.t1 | AT1G72190 | 26.966 | 267 | 173 | 8 | 88 | 349 | 117 | 366 | 1.70e-15 | 77.8 |
Find 88 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCATATGGTGCTTTCTTAA+AGG | 0.276108 | 1.4:-86408823 | MS.gene029300:CDS |
| AACCAGTTTCAATTCAAGTA+TGG | 0.311416 | 1.4:-86411035 | MS.gene029300:CDS |
| GATAAGTGTGATGGAGTTAT+TGG | 0.337723 | 1.4:-86410757 | MS.gene029300:CDS |
| GTCAATGCTGCAAACAAATA+TGG | 0.354110 | 1.4:-86410169 | MS.gene029300:CDS |
| TTCCATACTTGAATTGAAAC+TGG | 0.356787 | 1.4:+86411033 | None:intergenic |
| AGGCAAAGCTTTCAGTAATA+TGG | 0.369024 | 1.4:-86410215 | MS.gene029300:CDS |
| GGACAAACAGTTGGTGTTAT+CGG | 0.377915 | 1.4:-86409535 | MS.gene029300:CDS |
| TTTCTGCTGTATCAGGTTGA+AGG | 0.378719 | 1.4:-86408989 | MS.gene029300:intron |
| AACTCTAACCTTCTTCATCT+TGG | 0.389875 | 1.4:+86408573 | None:intergenic |
| TGTTTATCGGGCAGATTTGT+TGG | 0.390978 | 1.4:-86409571 | MS.gene029300:intron |
| TTCTCTGCTTTGAGCAAAGC+AGG | 0.391693 | 1.4:-86410238 | MS.gene029300:CDS |
| AGATTGATCCAACGAGTTCC+AGG | 0.398695 | 1.4:+86410970 | None:intergenic |
| GATTAGTCTTCATCCTATCT+TGG | 0.399037 | 1.4:-86408635 | MS.gene029300:CDS |
| CAGTATGGTTTGATGCCAAT+AGG | 0.402824 | 1.4:-86407809 | MS.gene029300:CDS |
| GTTATCGGAGCTGGCCGTAT+TGG | 0.403616 | 1.4:-86409520 | MS.gene029300:CDS |
| AAGAAATGGCTCCACCCTAT+TGG | 0.407299 | 1.4:+86407794 | None:intergenic |
| GGTAGAGATCGAAGTATATC+AGG | 0.410543 | 1.4:+86408954 | None:intergenic |
| AGATCAAGGGCTACCCAGTA+TGG | 0.420729 | 1.4:-86407824 | MS.gene029300:CDS |
| CTATTGGCATCAAACCATAC+TGG | 0.422550 | 1.4:+86407810 | None:intergenic |
| CGTAGGCCTTGATGTGTTTG+AGG | 0.424117 | 1.4:-86408376 | MS.gene029300:intron |
| ATACACTACAGCTTTGAAAC+TGG | 0.431086 | 1.4:+86407607 | None:intergenic |
| TTCTTCAACTCTGCAAGTCC+AGG | 0.432293 | 1.4:+86408252 | None:intergenic |
| TTCTTACTATATCTGCCTCT+TGG | 0.435870 | 1.4:+86408745 | None:intergenic |
| TGACTTTGGCAGCTGCTAGA+AGG | 0.446003 | 1.4:-86409790 | MS.gene029300:CDS |
| GCTTGCAGCTTCACTGACTT+TGG | 0.451429 | 1.4:-86409804 | MS.gene029300:CDS |
| GAAGATATCATTGCTTTGAT+TGG | 0.457462 | 1.4:-86410781 | MS.gene029300:CDS |
| ACAATGCTTGGGCATGCAGC+TGG | 0.459559 | 1.4:+86407753 | None:intergenic |
| GGTGCTTTCTTAAAGGCAAA+TGG | 0.460883 | 1.4:-86408816 | MS.gene029300:CDS |
| AGTGCAACTTCATCAATAAC+AGG | 0.463873 | 1.4:+86408432 | None:intergenic |
| AAACACCAGTAACTTGGAAA+AGG | 0.465743 | 1.4:-86408791 | MS.gene029300:CDS |
| TATAATACAGGGCAAGATCA+AGG | 0.470540 | 1.4:-86407838 | MS.gene029300:intron |
| CTTGTTGACGAGGTGGTAAG+TGG | 0.472748 | 1.4:+86408606 | None:intergenic |
| AGTATGGTTTGATGCCAATA+GGG | 0.473886 | 1.4:-86407808 | MS.gene029300:CDS |
| ACACATTGCTTCTGCTTCCA+AGG | 0.479271 | 1.4:-86408214 | MS.gene029300:intron |
| AACAAATATGGTGTTGCTGT+TGG | 0.490286 | 1.4:-86410157 | MS.gene029300:CDS |
| TTGGAAAAGGGCAGCATCCA+TGG | 0.493217 | 1.4:-86408778 | MS.gene029300:CDS |
| ATGGTGAAACACCAGTAACT+TGG | 0.493816 | 1.4:-86408797 | MS.gene029300:CDS |
| TTCTGCTGTATCAGGTTGAA+GGG | 0.494245 | 1.4:-86408988 | MS.gene029300:intron |
| ATTCAAGTATGGAACCCAAA+TGG | 0.502702 | 1.4:-86411024 | MS.gene029300:CDS |
| GCTTTCAGTAATATGGCTGT+TGG | 0.504769 | 1.4:-86410208 | MS.gene029300:CDS |
| GCAAGTCCAGGTTTCATGTA+GGG | 0.504842 | 1.4:+86408264 | None:intergenic |
| CGAGTCTTTCCTTGTTGACG+AGG | 0.512210 | 1.4:+86408596 | None:intergenic |
| ACAGTTGGTGTTATCGGAGC+TGG | 0.526985 | 1.4:-86409529 | MS.gene029300:CDS |
| GCAGATGAGTTCATGAGGGC+AGG | 0.528261 | 1.4:-86409758 | MS.gene029300:CDS |
| GCAGTGGACTCGTGAGGGAA+TGG | 0.533885 | 1.4:-86407980 | MS.gene029300:intron |
| AACACCAGTAACTTGGAAAA+GGG | 0.538959 | 1.4:-86408790 | MS.gene029300:CDS |
| TTGCATAAGCTGATCCAATA+CGG | 0.539584 | 1.4:+86409506 | None:intergenic |
| TCAAGGCCTACGCGAAACAT+TGG | 0.540440 | 1.4:+86408387 | None:intergenic |
| TGCAAGTCCAGGTTTCATGT+AGG | 0.550331 | 1.4:+86408263 | None:intergenic |
| CTCTTGGAGAACCTCGTCCA+TGG | 0.559767 | 1.4:+86408761 | None:intergenic |
| GTCTTTCCTTGTTGACGAGG+TGG | 0.560436 | 1.4:+86408599 | None:intergenic |
| GCTAGCAGCTCTAAATGTGC+TGG | 0.561333 | 1.4:-86407953 | MS.gene029300:intron |
| GTGTGATGGAGTTATTGGAC+AGG | 0.566011 | 1.4:-86410752 | MS.gene029300:intron |
| CAATTACCTCAAACACATCA+AGG | 0.566746 | 1.4:+86408370 | None:intergenic |
| GGGCAGGATTATATGATGGC+TGG | 0.567472 | 1.4:-86409742 | MS.gene029300:CDS |
| TATTGATGAAGTTGCACTTG+TGG | 0.567753 | 1.4:-86408427 | MS.gene029300:CDS |
| CACTTACCACCTCGTCAACA+AGG | 0.569943 | 1.4:-86408605 | MS.gene029300:CDS |
| ATTCTTATAAACTGCAGTAG+AGG | 0.572235 | 1.4:-86408456 | MS.gene029300:CDS |
| GTTAGCACAAAATCAATGCC+TGG | 0.572324 | 1.4:-86410988 | MS.gene029300:CDS |
| ATTTGTTGGAAACTTGCTCA+AGG | 0.580236 | 1.4:-86409557 | MS.gene029300:CDS |
| ATGAGGGCAGGATTATATGA+TGG | 0.580751 | 1.4:-86409746 | MS.gene029300:CDS |
| TTTGCAGCTGACTGAAGACT+GGG | 0.581414 | 1.4:-86410272 | MS.gene029300:intron |
| ATCAGCTTATGCAAGAATGA+TGG | 0.584719 | 1.4:-86409497 | MS.gene029300:intron |
| AGACTAGAAAAGTTTGTCAC+AGG | 0.585130 | 1.4:-86408923 | MS.gene029300:intron |
| TTATTGAATTCAGATATGTA+CGG | 0.587056 | 1.4:-86410827 | MS.gene029300:intron |
| AATCAATGCCTGGAACTCGT+TGG | 0.587209 | 1.4:-86410978 | MS.gene029300:CDS |
| TTGATTGGTGATAAGTGTGA+TGG | 0.588494 | 1.4:-86410766 | MS.gene029300:CDS |
| GGGAGTTCTCACAGAGACTA+CGG | 0.589946 | 1.4:-86409831 | MS.gene029300:CDS |
| TTTGTTGGAAACTTGCTCAA+GGG | 0.594105 | 1.4:-86409556 | MS.gene029300:CDS |
| GATGAGCCCTACATGAAACC+TGG | 0.594414 | 1.4:-86408270 | MS.gene029300:CDS |
| ATAATACAGGGCAAGATCAA+GGG | 0.598270 | 1.4:-86407837 | MS.gene029300:intron |
| AAGACTCGCCAAGATGAAGA+AGG | 0.601821 | 1.4:-86408581 | MS.gene029300:intron |
| TTGCTCAAGGGACAAACAGT+TGG | 0.607085 | 1.4:-86409544 | MS.gene029300:CDS |
| TATTGGCATCAAACCATACT+GGG | 0.608430 | 1.4:+86407811 | None:intergenic |
| TTGAGGCAGATGAGTTCATG+AGG | 0.619999 | 1.4:-86409763 | MS.gene029300:CDS |
| AAGGGCAGCATCCATGGACG+AGG | 0.621564 | 1.4:-86408772 | MS.gene029300:CDS |
| GAAAATCCAATGTTTCGCGT+AGG | 0.638637 | 1.4:-86408393 | MS.gene029300:CDS |
| AGCTGCTAGAAGGATAGTTG+AGG | 0.641144 | 1.4:-86409780 | MS.gene029300:CDS |
| ATGGTTTGATGCCAATAGGG+TGG | 0.649631 | 1.4:-86407805 | MS.gene029300:CDS |
| TGAGGCAGATGAGTTCATGA+GGG | 0.651617 | 1.4:-86409762 | MS.gene029300:CDS |
| TCTGCTTTGAGCAAAGCAGG+AGG | 0.664158 | 1.4:-86410235 | MS.gene029300:CDS |
| CATGGACGAGGTTCTCCAAG+AGG | 0.666582 | 1.4:-86408760 | MS.gene029300:CDS |
| ATGCTTGGGCATGCAGCTGG+AGG | 0.674932 | 1.4:+86407756 | None:intergenic |
| GTGTTTGCAGTGGACTCGTG+AGG | 0.684941 | 1.4:-86407986 | MS.gene029300:intron |
| TGTTTGCAGTGGACTCGTGA+GGG | 0.684969 | 1.4:-86407985 | MS.gene029300:intron |
| AGCAATGTGTGGTACTACAA+CGG | 0.690341 | 1.4:+86408227 | None:intergenic |
| TTGCAGCTGACTGAAGACTG+GGG | 0.715483 | 1.4:-86410271 | MS.gene029300:intron |
| TTGGAAGCAGAAGCAATGTG+TGG | 0.717012 | 1.4:+86408216 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTATTTTTAAATTAT+AGG | - | chr1.4:86408013-86408032 | MS.gene029300:intron | 0.0% |
| !!! | TTTAAATTATAGGTTTTTTT+TGG | - | chr1.4:86408023-86408042 | MS.gene029300:intron | 10.0% |
| !! | TCATCATAAACTAAATTATT+AGG | + | chr1.4:86409988-86410007 | None:intergenic | 15.0% |
| !!! | AGTTTAAATTTTAACATAAG+AGG | - | chr1.4:86408285-86408304 | MS.gene029300:intron | 15.0% |
| !!! | ATTTACATTTTAAATGTATG+TGG | - | chr1.4:86408579-86408598 | MS.gene029300:intron | 15.0% |
| !!! | TCTAAATAGCTATTTTTTAT+TGG | - | chr1.4:86408106-86408125 | MS.gene029300:intron | 15.0% |
| !! | AATATATCATTAGTAACAGA+GGG | + | chr1.4:86410162-86410181 | None:intergenic | 20.0% |
| !! | AATCTTAAGTAAAACAAGAA+AGG | + | chr1.4:86408963-86408982 | None:intergenic | 20.0% |
| !! | AGTTGCTAATAAAAATTACT+TGG | - | chr1.4:86409272-86409291 | MS.gene029300:intron | 20.0% |
| !! | ATAACTAAAATTGATTACCT+TGG | + | chr1.4:86410460-86410479 | None:intergenic | 20.0% |
| !! | ATCCATTTAAACAAATCATA+GGG | + | chr1.4:86409762-86409781 | None:intergenic | 20.0% |
| !! | TATCCATTTAAACAAATCAT+AGG | + | chr1.4:86409763-86409782 | None:intergenic | 20.0% |
| !! | TTATTGAATTCAGATATGTA+CGG | - | chr1.4:86407827-86407846 | MS.gene029300:CDS | 20.0% |
| !!! | ACAGTTTTGATTTTGTTTAT+CGG | - | chr1.4:86409070-86409089 | MS.gene029300:intron | 20.0% |
| !!! | ATTCTAAGTTAACAGATTTT+TGG | + | chr1.4:86409578-86409597 | None:intergenic | 20.0% |
| !!! | GTTTTATTTCCAACAATATT+TGG | + | chr1.4:86410974-86410993 | None:intergenic | 20.0% |
| !!! | TATATTTTATTTCTAATCGC+AGG | - | chr1.4:86411020-86411039 | MS.gene029300:CDS | 20.0% |
| !!! | TGTGAAAAGAATCTTTTTTT+AGG | + | chr1.4:86410609-86410628 | None:intergenic | 20.0% |
| ! | AATTTACATTGATCAAACGT+AGG | + | chr1.4:86410760-86410779 | None:intergenic | 25.0% |
| ! | ATAAAAAAAAGAGAAGCTAG+TGG | - | chr1.4:86409481-86409500 | MS.gene029300:intron | 25.0% |
| ! | ATATTGTGAATCAAGAATAG+AGG | - | chr1.4:86408209-86408228 | MS.gene029300:intron | 25.0% |
| ! | ATTGTCACGATATTCAAATT+TGG | - | chr1.4:86409531-86409550 | MS.gene029300:CDS | 25.0% |
| ! | GAATATATCATTAGTAACAG+AGG | + | chr1.4:86410163-86410182 | None:intergenic | 25.0% |
| ! | GACTTGGCATAAAATTAAAA+CGG | - | chr1.4:86409307-86409326 | MS.gene029300:intron | 25.0% |
| ! | GTGAAAAATGTTATTACTCA+GGG | + | chr1.4:86410938-86410957 | None:intergenic | 25.0% |
| ! | TAATGATATATTCTTATCGC+AGG | - | chr1.4:86410170-86410189 | MS.gene029300:CDS | 25.0% |
| ! | TATTGTGAATCAAGAATAGA+GGG | - | chr1.4:86408210-86408229 | MS.gene029300:intron | 25.0% |
| ! | TCATCCTAATAAAAATCACA+TGG | + | chr1.4:86410369-86410388 | None:intergenic | 25.0% |
| ! | TTCATATCATTCATTGTGTT+TGG | - | chr1.4:86408798-86408817 | MS.gene029300:CDS | 25.0% |
| ! | TTTAACATAAAAGCAACTCT+CGG | - | chr1.4:86408324-86408343 | MS.gene029300:intron | 25.0% |
| !! | AATGCAAATCTGAAATGTAT+GGG | + | chr1.4:86409190-86409209 | None:intergenic | 25.0% |
| !!! | ATGTGGTTTTTTTTACTTCT+GGG | - | chr1.4:86408050-86408069 | MS.gene029300:intron | 25.0% |
| !!! | CAGTTTTGATTTTGTTTATC+GGG | - | chr1.4:86409071-86409090 | MS.gene029300:intron | 25.0% |
| !!! | GAAAAGAATCTTTTTTTAGG+TGG | + | chr1.4:86410606-86410625 | None:intergenic | 25.0% |
| !!! | GAAGTTATTTGTTATAACCT+TGG | - | chr1.4:86408774-86408793 | MS.gene029300:CDS | 25.0% |
| !!! | GTTTATTTTTCATACAGATG+AGG | + | chr1.4:86408941-86408960 | None:intergenic | 25.0% |
| !!! | TAAGTTAACAGATTTTTGGA+AGG | + | chr1.4:86409574-86409593 | None:intergenic | 25.0% |
| !!! | TATGTGGTTTTTTTTACTTC+TGG | - | chr1.4:86408049-86408068 | MS.gene029300:intron | 25.0% |
| AACCAGTTTCAATTCAAGTA+TGG | - | chr1.4:86407619-86407638 | MS.gene029300:intron | 30.0% | |
| ATCATTCATTGTGTTTGGTA+GGG | - | chr1.4:86408803-86408822 | MS.gene029300:CDS | 30.0% | |
| ATGTATATGTGATGCTGAAT+CGG | - | chr1.4:86408696-86408715 | MS.gene029300:intron | 30.0% | |
| ATTCTTATAAACTGCAGTAG+AGG | - | chr1.4:86410198-86410217 | MS.gene029300:CDS | 30.0% | |
| ATTGTGAATCAAGAATAGAG+GGG | - | chr1.4:86408211-86408230 | MS.gene029300:intron | 30.0% | |
| CAATGAATGATATGAAACCA+AGG | + | chr1.4:86408794-86408813 | None:intergenic | 30.0% | |
| GAAGATATCATTGCTTTGAT+TGG | - | chr1.4:86407873-86407892 | MS.gene029300:intron | 30.0% | |
| GGTGAAAAATGTTATTACTC+AGG | + | chr1.4:86410939-86410958 | None:intergenic | 30.0% | |
| TATCATTCATTGTGTTTGGT+AGG | - | chr1.4:86408802-86408821 | MS.gene029300:CDS | 30.0% | |
| TCAAAGTTATCATGTATGCT+TGG | - | chr1.4:86408626-86408645 | MS.gene029300:CDS | 30.0% | |
| TGTTAGTGTCAAAATGATAC+AGG | + | chr1.4:86408552-86408571 | None:intergenic | 30.0% | |
| TTAACATAAAAGCAACTCTC+GGG | - | chr1.4:86408325-86408344 | MS.gene029300:intron | 30.0% | |
| TTCCATACTTGAATTGAAAC+TGG | + | chr1.4:86407624-86407643 | None:intergenic | 30.0% | |
| TTCTTTGTTGAGTCAATCAA+TGG | - | chr1.4:86407782-86407801 | MS.gene029300:CDS | 30.0% | |
| ! | ATGTACTAAAGTGTTTATCG+AGG | - | chr1.4:86408257-86408276 | MS.gene029300:CDS | 30.0% |
| ! | CAATGCAAATCTGAAATGTA+TGG | + | chr1.4:86409191-86409210 | None:intergenic | 30.0% |
| ! | CTTTTGCATTAACAATGCTT+GGG | + | chr1.4:86410915-86410934 | None:intergenic | 30.0% |
| ! | GACACCATGTGATTTTTATT+AGG | - | chr1.4:86410362-86410381 | MS.gene029300:intron | 30.0% |
| ! | GCTCATCAGTTTTACAAAAT+AGG | + | chr1.4:86410791-86410810 | None:intergenic | 30.0% |
| ! | TGAGCATTTTCATCAAGAAA+TGG | + | chr1.4:86410877-86410896 | None:intergenic | 30.0% |
| ! | TTTTTCCTTATTGCAGCATA+TGG | - | chr1.4:86409817-86409836 | MS.gene029300:CDS | 30.0% |
| !! | AATAGTGATTAGTCTTGATG+AGG | - | chr1.4:86408752-86408771 | MS.gene029300:CDS | 30.0% |
| !! | GTCCCTATGATTTGTTTAAA+TGG | - | chr1.4:86409757-86409776 | MS.gene029300:CDS | 30.0% |
| !! | TGTTAGTGGTTAGTTTACTA+AGG | + | chr1.4:86410574-86410593 | None:intergenic | 30.0% |
| !!! | ACTTTTCTAGTCTTGTAGAT+TGG | + | chr1.4:86409724-86409743 | None:intergenic | 30.0% |
| !!! | AGGTTTTTTTTGGTTGTATG+TGG | - | chr1.4:86408033-86408052 | MS.gene029300:intron | 30.0% |
| !!! | TAAGTGGTTTTATCCAAGAT+AGG | + | chr1.4:86410035-86410054 | None:intergenic | 30.0% |
| !!! | TGTGGTTTTTTTTACTTCTG+GGG | - | chr1.4:86408051-86408070 | MS.gene029300:intron | 30.0% |
| AAACACCAGTAACTTGGAAA+AGG | - | chr1.4:86409863-86409882 | MS.gene029300:intron | 35.0% | |
| AAATTACTTATGGCATCACG+TGG | - | chr1.4:86410128-86410147 | MS.gene029300:intron | 35.0% | |
| AACACCAGTAACTTGGAAAA+GGG | - | chr1.4:86409864-86409883 | MS.gene029300:intron | 35.0% | |
| AACTCTAACCTTCTTCATCT+TGG | + | chr1.4:86410084-86410103 | None:intergenic | 35.0% | |
| AATATTTGGCCCAAGTGAAA+GGG | + | chr1.4:86410960-86410979 | None:intergenic | 35.0% | |
| AATCACATGGTGTCTTGAAA+AGG | + | chr1.4:86410356-86410375 | None:intergenic | 35.0% | |
| AGACTAGAAAAGTTTGTCAC+AGG | - | chr1.4:86409731-86409750 | MS.gene029300:CDS | 35.0% | |
| AGCATATGGTGCTTTCTTAA+AGG | - | chr1.4:86409831-86409850 | MS.gene029300:CDS | 35.0% | |
| AGGCAAAGCTTTCAGTAATA+TGG | - | chr1.4:86408439-86408458 | MS.gene029300:CDS | 35.0% | |
| AGTATGGTTTGATGCCAATA+GGG | - | chr1.4:86410846-86410865 | MS.gene029300:intron | 35.0% | |
| AGTGCAACTTCATCAATAAC+AGG | + | chr1.4:86410225-86410244 | None:intergenic | 35.0% | |
| ATAATACAGGGCAAGATCAA+GGG | - | chr1.4:86410817-86410836 | MS.gene029300:CDS | 35.0% | |
| ATCAGCTTATGCAAGAATGA+TGG | - | chr1.4:86409157-86409176 | MS.gene029300:intron | 35.0% | |
| ATCCTACTTGAAAGTTCTCT+AGG | - | chr1.4:86409335-86409354 | MS.gene029300:intron | 35.0% | |
| ATGAAGAAGGTTAGAGTTCA+AGG | - | chr1.4:86410086-86410105 | MS.gene029300:intron | 35.0% | |
| ATGAGCCTCCTTATAATACA+GGG | - | chr1.4:86410805-86410824 | MS.gene029300:CDS | 35.0% | |
| ATGTCTATCCATACCATTTC+AGG | - | chr1.4:86409212-86409231 | MS.gene029300:intron | 35.0% | |
| ATTCAAGTATGGAACCCAAA+TGG | - | chr1.4:86407630-86407649 | MS.gene029300:intron | 35.0% | |
| CAATTACCTCAAACACATCA+AGG | + | chr1.4:86410287-86410306 | None:intergenic | 35.0% | |
| CTCTAGGTCACATAATATCT+AGG | - | chr1.4:86409351-86409370 | MS.gene029300:intron | 35.0% | |
| GAATGAAAGAGAAAGCTTAC+AGG | + | chr1.4:86408530-86408549 | None:intergenic | 35.0% | |
| GTCAATGCTGCAAACAAATA+TGG | - | chr1.4:86408485-86408504 | MS.gene029300:intron | 35.0% | |
| TATAATACAGGGCAAGATCA+AGG | - | chr1.4:86410816-86410835 | MS.gene029300:CDS | 35.0% | |
| TATCATGTATGCTTGGATGA+GGG | - | chr1.4:86408633-86408652 | MS.gene029300:CDS | 35.0% | |
| TATTGATGAAGTTGCACTTG+TGG | - | chr1.4:86410227-86410246 | MS.gene029300:CDS | 35.0% | |
| TATTGGCATCAAACCATACT+GGG | + | chr1.4:86410846-86410865 | None:intergenic | 35.0% | |
| TCAATCAAGTGAACCTGAAA+TGG | + | chr1.4:86409228-86409247 | None:intergenic | 35.0% | |
| TGAAGAAGGTTAGAGTTCAA+GGG | - | chr1.4:86410087-86410106 | MS.gene029300:intron | 35.0% | |
| TGATCTTGCCCTGTATTATA+AGG | + | chr1.4:86410816-86410835 | None:intergenic | 35.0% | |
| TGCTGAATCGGTTGTAATTA+TGG | - | chr1.4:86408708-86408727 | MS.gene029300:intron | 35.0% | |
| TGGGACTTAGAATTAAGTAC+AGG | - | chr1.4:86410516-86410535 | MS.gene029300:intron | 35.0% | |
| TTATCATGTATGCTTGGATG+AGG | - | chr1.4:86408632-86408651 | MS.gene029300:CDS | 35.0% | |
| TTCAAATTTGGCCAAGTTAC+TGG | - | chr1.4:86409543-86409562 | MS.gene029300:CDS | 35.0% | |
| TTCTTACTATATCTGCCTCT+TGG | + | chr1.4:86409912-86409931 | None:intergenic | 35.0% | |
| TTGCATAAGCTGATCCAATA+CGG | + | chr1.4:86409151-86409170 | None:intergenic | 35.0% | |
| TTGTGAATCAAGAATAGAGG+GGG | - | chr1.4:86408212-86408231 | MS.gene029300:intron | 35.0% | |
| ! | AATTGAACCTTGTGTGCTTT+TGG | - | chr1.4:86410302-86410321 | MS.gene029300:intron | 35.0% |
| ! | ACATTTTTCACCCTTTCACT+TGG | - | chr1.4:86410947-86410966 | MS.gene029300:CDS | 35.0% |
| ! | ACGACTCTGTATTTTCCATT+TGG | + | chr1.4:86407648-86407667 | None:intergenic | 35.0% |
| ! | ATTTGTTGGAAACTTGCTCA+AGG | - | chr1.4:86409097-86409116 | MS.gene029300:intron | 35.0% |
| ! | CATTTTTCACCCTTTCACTT+GGG | - | chr1.4:86410948-86410967 | MS.gene029300:CDS | 35.0% |
| ! | CGACTCTGTATTTTCCATTT+GGG | + | chr1.4:86407647-86407666 | None:intergenic | 35.0% |
| ! | GATAAGTGTGATGGAGTTAT+TGG | - | chr1.4:86407897-86407916 | MS.gene029300:intron | 35.0% |
| ! | GCTTTTGCATTAACAATGCT+TGG | + | chr1.4:86410916-86410935 | None:intergenic | 35.0% |
| ! | GTTAGTTTACTAAGGAGAAG+GGG | + | chr1.4:86410566-86410585 | None:intergenic | 35.0% |
| ! | TGATTCTTTTCTGCTGTATC+AGG | - | chr1.4:86409658-86409677 | MS.gene029300:intron | 35.0% |
| ! | TTGATTGGTGATAAGTGTGA+TGG | - | chr1.4:86407888-86407907 | MS.gene029300:intron | 35.0% |
| ! | TTGTTATCCAAAAGCACACA+AGG | + | chr1.4:86410312-86410331 | None:intergenic | 35.0% |
| ! | TTTGTTGGAAACTTGCTCAA+GGG | - | chr1.4:86409098-86409117 | MS.gene029300:intron | 35.0% |
| !! | AACAAATATGGTGTTGCTGT+TGG | - | chr1.4:86408497-86408516 | MS.gene029300:intron | 35.0% |
| !! | GATTAGTCTTCATCCTATCT+TGG | - | chr1.4:86410019-86410038 | MS.gene029300:intron | 35.0% |
| !! | GGTTAGTTTACTAAGGAGAA+GGG | + | chr1.4:86410567-86410586 | None:intergenic | 35.0% |
| !! | TGGTTAGTTTACTAAGGAGA+AGG | + | chr1.4:86410568-86410587 | None:intergenic | 35.0% |
| !!! | TTGGTTTTTGAGTACTGACT+TGG | - | chr1.4:86409291-86409310 | MS.gene029300:intron | 35.0% |
| AAGCACCATATGCTGCAATA+AGG | + | chr1.4:86409825-86409844 | None:intergenic | 40.0% | |
| AATCCAAGATGGAGAGACAT+AGG | + | chr1.4:86410733-86410752 | None:intergenic | 40.0% | |
| ACGTAGGAATGAATCCAAGA+TGG | + | chr1.4:86410744-86410763 | None:intergenic | 40.0% | |
| ACTTGTACTGCTAAACCTTC+GGG | - | chr1.4:86408666-86408685 | MS.gene029300:intron | 40.0% | |
| AGCAATGTGTGGTACTACAA+CGG | + | chr1.4:86410430-86410449 | None:intergenic | 40.0% | |
| ATATACATGCATGTACCCGA+AGG | + | chr1.4:86408684-86408703 | None:intergenic | 40.0% | |
| ATCCAAGATGGAGAGACATA+GGG | + | chr1.4:86410732-86410751 | None:intergenic | 40.0% | |
| ATGAGGGCAGGATTATATGA+TGG | - | chr1.4:86408908-86408927 | MS.gene029300:intron | 40.0% | |
| ATGGTGAAACACCAGTAACT+TGG | - | chr1.4:86409857-86409876 | MS.gene029300:intron | 40.0% | |
| CAAGTGAACCTGAAATGGTA+TGG | + | chr1.4:86409223-86409242 | None:intergenic | 40.0% | |
| CAATATTTGGCCCAAGTGAA+AGG | + | chr1.4:86410961-86410980 | None:intergenic | 40.0% | |
| CAGTATGGTTTGATGCCAAT+AGG | - | chr1.4:86410845-86410864 | MS.gene029300:intron | 40.0% | |
| CTATTGGCATCAAACCATAC+TGG | + | chr1.4:86410847-86410866 | None:intergenic | 40.0% | |
| GAAAATCCAATGTTTCGCGT+AGG | - | chr1.4:86410261-86410280 | MS.gene029300:CDS | 40.0% | |
| GACTTGTACTGCTAAACCTT+CGG | - | chr1.4:86408665-86408684 | MS.gene029300:intron | 40.0% | |
| GATGAGCCTCCTTATAATAC+AGG | - | chr1.4:86410804-86410823 | MS.gene029300:CDS | 40.0% | |
| GCTTTCAGTAATATGGCTGT+TGG | - | chr1.4:86408446-86408465 | MS.gene029300:CDS | 40.0% | |
| GGTAGAGATCGAAGTATATC+AGG | + | chr1.4:86409703-86409722 | None:intergenic | 40.0% | |
| GGTGCTTTCTTAAAGGCAAA+TGG | - | chr1.4:86409838-86409857 | MS.gene029300:intron | 40.0% | |
| GGTGGATATGCAAATGTTAG+TGG | + | chr1.4:86410588-86410607 | None:intergenic | 40.0% | |
| GTTAGCACAAAATCAATGCC+TGG | - | chr1.4:86407666-86407685 | MS.gene029300:intron | 40.0% | |
| TCACTTGGGCCAAATATTGT+TGG | - | chr1.4:86410962-86410981 | MS.gene029300:CDS | 40.0% | |
| TCTTGCCCTGTATTATAAGG+AGG | + | chr1.4:86410813-86410832 | None:intergenic | 40.0% | |
| TGTGAATCAAGAATAGAGGG+GGG | - | chr1.4:86408213-86408232 | MS.gene029300:intron | 40.0% | |
| TGTGCTATACACTCTTCTGA+AGG | - | chr1.4:86409039-86409058 | MS.gene029300:intron | 40.0% | |
| TGTTTATCGGGCAGATTTGT+TGG | - | chr1.4:86409083-86409102 | MS.gene029300:intron | 40.0% | |
| TTTCATGCATGTGTTTGCAG+TGG | - | chr1.4:86410658-86410677 | MS.gene029300:intron | 40.0% | |
| ! | CTAAAGTGTTTATCGAGGAG+AGG | - | chr1.4:86408262-86408281 | MS.gene029300:CDS | 40.0% |
| ! | GACCTAGAGAACTTTCAAGT+AGG | + | chr1.4:86409340-86409359 | None:intergenic | 40.0% |
| ! | GTGTGCTTTTGGATAACAAC+AGG | - | chr1.4:86410313-86410332 | MS.gene029300:intron | 40.0% |
| !! | GGACAAACAGTTGGTGTTAT+CGG | - | chr1.4:86409119-86409138 | MS.gene029300:intron | 40.0% |
| !! | TTCTGCTGTATCAGGTTGAA+GGG | - | chr1.4:86409666-86409685 | MS.gene029300:intron | 40.0% |
| !! | TTTCTGCTGTATCAGGTTGA+AGG | - | chr1.4:86409665-86409684 | MS.gene029300:intron | 40.0% |
| AAGAAATGGCTCCACCCTAT+TGG | + | chr1.4:86410863-86410882 | None:intergenic | 45.0% | |
| AAGACTCGCCAAGATGAAGA+AGG | - | chr1.4:86410073-86410092 | MS.gene029300:intron | 45.0% | |
| AATCAATGCCTGGAACTCGT+TGG | - | chr1.4:86407676-86407695 | MS.gene029300:intron | 45.0% | |
| ACACATTGCTTCTGCTTCCA+AGG | - | chr1.4:86410440-86410459 | MS.gene029300:intron | 45.0% | |
| AGATTGATCCAACGAGTTCC+AGG | + | chr1.4:86407687-86407706 | None:intergenic | 45.0% | |
| AGCTGCTAGAAGGATAGTTG+AGG | - | chr1.4:86408874-86408893 | MS.gene029300:intron | 45.0% | |
| ATAAAAGCAACTCTCGGGAG+AGG | - | chr1.4:86408330-86408349 | MS.gene029300:intron | 45.0% | |
| ATCCCTATGTCTCTCCATCT+TGG | - | chr1.4:86410727-86410746 | MS.gene029300:intron | 45.0% | |
| ATGGTTTGATGCCAATAGGG+TGG | - | chr1.4:86410849-86410868 | MS.gene029300:intron | 45.0% | |
| CACATGGTGTCTTGAAAAGG+TGG | + | chr1.4:86410353-86410372 | None:intergenic | 45.0% | |
| GCAAGTCCAGGTTTCATGTA+GGG | + | chr1.4:86410393-86410412 | None:intergenic | 45.0% | |
| TAAAAGCAACTCTCGGGAGA+GGG | - | chr1.4:86408331-86408350 | MS.gene029300:intron | 45.0% | |
| TGAGGCAGATGAGTTCATGA+GGG | - | chr1.4:86408892-86408911 | MS.gene029300:intron | 45.0% | |
| TGCAAGTCCAGGTTTCATGT+AGG | + | chr1.4:86410394-86410413 | None:intergenic | 45.0% | |
| TTCTTCAACTCTGCAAGTCC+AGG | + | chr1.4:86410405-86410424 | None:intergenic | 45.0% | |
| TTGAGGCAGATGAGTTCATG+AGG | - | chr1.4:86408891-86408910 | MS.gene029300:intron | 45.0% | |
| TTGCTCAAGGGACAAACAGT+TGG | - | chr1.4:86409110-86409129 | MS.gene029300:intron | 45.0% | |
| TTGGAAGCAGAAGCAATGTG+TGG | + | chr1.4:86410441-86410460 | None:intergenic | 45.0% | |
| TTTGCAGCTGACTGAAGACT+GGG | - | chr1.4:86408382-86408401 | MS.gene029300:CDS | 45.0% | |
| ! | CTATACACTCTTCTGAAGGC+TGG | - | chr1.4:86409043-86409062 | MS.gene029300:intron | 45.0% |
| ! | GTGTGATGGAGTTATTGGAC+AGG | - | chr1.4:86407902-86407921 | MS.gene029300:intron | 45.0% |
| ! | TTCTCTGCTTTGAGCAAAGC+AGG | - | chr1.4:86408416-86408435 | MS.gene029300:CDS | 45.0% |
| ! | TTTTGCAGCTGACTGAAGAC+TGG | - | chr1.4:86408381-86408400 | MS.gene029300:CDS | 45.0% |
| !! | TTATATATTTAAATTACTTA+TGG | - | chr1.4:86410118-86410137 | MS.gene029300:intron | 5.0% |
| AGATCAAGGGCTACCCAGTA+TGG | - | chr1.4:86410830-86410849 | MS.gene029300:intron | 50.0% | |
| CACTTACCACCTCGTCAACA+AGG | - | chr1.4:86410049-86410068 | MS.gene029300:intron | 50.0% | |
| CGAGTCTTTCCTTGTTGACG+AGG | + | chr1.4:86410061-86410080 | None:intergenic | 50.0% | |
| CGTAGGCCTTGATGTGTTTG+AGG | - | chr1.4:86410278-86410297 | MS.gene029300:intron | 50.0% | |
| CTTGTTGACGAGGTGGTAAG+TGG | + | chr1.4:86410051-86410070 | None:intergenic | 50.0% | |
| GATGAGCCCTACATGAAACC+TGG | - | chr1.4:86410384-86410403 | MS.gene029300:intron | 50.0% | |
| GGAAGGCTTGTCCAGTAACT+TGG | + | chr1.4:86409557-86409576 | None:intergenic | 50.0% | |
| GGGAGTTCTCACAGAGACTA+CGG | - | chr1.4:86408823-86408842 | MS.gene029300:CDS | 50.0% | |
| GGGCAGGATTATATGATGGC+TGG | - | chr1.4:86408912-86408931 | MS.gene029300:intron | 50.0% | |
| GTCTTTCCTTGTTGACGAGG+TGG | + | chr1.4:86410058-86410077 | None:intergenic | 50.0% | |
| TCAAGGCCTACGCGAAACAT+TGG | + | chr1.4:86410270-86410289 | None:intergenic | 50.0% | |
| TGACTTTGGCAGCTGCTAGA+AGG | - | chr1.4:86408864-86408883 | MS.gene029300:intron | 50.0% | |
| TTGCAGCTGACTGAAGACTG+GGG | - | chr1.4:86408383-86408402 | MS.gene029300:CDS | 50.0% | |
| TTGGAAAAGGGCAGCATCCA+TGG | - | chr1.4:86409876-86409895 | MS.gene029300:intron | 50.0% | |
| ! | GCTGCCCTTTTCCAAGTTAC+TGG | + | chr1.4:86409871-86409890 | None:intergenic | 50.0% |
| ! | TCTGCTTTGAGCAAAGCAGG+AGG | - | chr1.4:86408419-86408438 | MS.gene029300:CDS | 50.0% |
| ! | TGTTTGCAGTGGACTCGTGA+GGG | - | chr1.4:86410669-86410688 | MS.gene029300:intron | 50.0% |
| !! | ACAGTTGGTGTTATCGGAGC+TGG | - | chr1.4:86409125-86409144 | MS.gene029300:intron | 50.0% |
| !! | GCTAGCAGCTCTAAATGTGC+TGG | - | chr1.4:86410701-86410720 | MS.gene029300:intron | 50.0% |
| !! | GCTTGCAGCTTCACTGACTT+TGG | - | chr1.4:86408850-86408869 | MS.gene029300:intron | 50.0% |
| ACAATGCTTGGGCATGCAGC+TGG | + | chr1.4:86410904-86410923 | None:intergenic | 55.0% | |
| AGTCCCAACCCATACCACTG+CGG | + | chr1.4:86410503-86410522 | None:intergenic | 55.0% | |
| CATGGACGAGGTTCTCCAAG+AGG | - | chr1.4:86409894-86409913 | MS.gene029300:intron | 55.0% | |
| CTCTTGGAGAACCTCGTCCA+TGG | + | chr1.4:86409896-86409915 | None:intergenic | 55.0% | |
| GCAGATGAGTTCATGAGGGC+AGG | - | chr1.4:86408896-86408915 | MS.gene029300:intron | 55.0% | |
| GTTATCGGAGCTGGCCGTAT+TGG | - | chr1.4:86409134-86409153 | MS.gene029300:intron | 55.0% | |
| TCATGTCCCCGCAGTGGTAT+GGG | - | chr1.4:86410492-86410511 | MS.gene029300:intron | 55.0% | |
| TTCATGTCCCCGCAGTGGTA+TGG | - | chr1.4:86410491-86410510 | MS.gene029300:intron | 55.0% | |
| ! | GTCTTTTCATGTCCCCGCAG+TGG | - | chr1.4:86410486-86410505 | MS.gene029300:intron | 55.0% |
| ! | GTGTTTGCAGTGGACTCGTG+AGG | - | chr1.4:86410668-86410687 | MS.gene029300:intron | 55.0% |
| AAGGGCAGCATCCATGGACG+AGG | - | chr1.4:86409882-86409901 | MS.gene029300:intron | 60.0% | |
| ATGCTTGGGCATGCAGCTGG+AGG | + | chr1.4:86410901-86410920 | None:intergenic | 60.0% | |
| GTCCCAACCCATACCACTGC+GGG | + | chr1.4:86410502-86410521 | None:intergenic | 60.0% | |
| TCCCAACCCATACCACTGCG+GGG | + | chr1.4:86410501-86410520 | None:intergenic | 60.0% | |
| TCCCCGCAGTGGTATGGGTT+GGG | - | chr1.4:86410497-86410516 | MS.gene029300:intron | 60.0% | |
| ! | GCAGTGGACTCGTGAGGGAA+TGG | - | chr1.4:86410674-86410693 | MS.gene029300:intron | 60.0% |
| GTCCCCGCAGTGGTATGGGT+TGG | - | chr1.4:86410496-86410515 | MS.gene029300:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 86407612 | 86411064 | 86407612 | ID=MS.gene029300 |
| chr1.4 | mRNA | 86407612 | 86411064 | 86407612 | ID=MS.gene029300.t1;Parent=MS.gene029300 |
| chr1.4 | exon | 86410942 | 86411064 | 86410942 | ID=MS.gene029300.t1.exon1;Parent=MS.gene029300.t1 |
| chr1.4 | CDS | 86410942 | 86411064 | 86410942 | ID=cds.MS.gene029300.t1;Parent=MS.gene029300.t1 |
| chr1.4 | exon | 86410753 | 86410836 | 86410753 | ID=MS.gene029300.t1.exon2;Parent=MS.gene029300.t1 |
| chr1.4 | CDS | 86410753 | 86410836 | 86410753 | ID=cds.MS.gene029300.t1;Parent=MS.gene029300.t1 |
| chr1.4 | exon | 86410147 | 86410287 | 86410147 | ID=MS.gene029300.t1.exon3;Parent=MS.gene029300.t1 |
| chr1.4 | CDS | 86410147 | 86410287 | 86410147 | ID=cds.MS.gene029300.t1;Parent=MS.gene029300.t1 |
| chr1.4 | exon | 86409731 | 86409852 | 86409731 | ID=MS.gene029300.t1.exon4;Parent=MS.gene029300.t1 |
| chr1.4 | CDS | 86409731 | 86409852 | 86409731 | ID=cds.MS.gene029300.t1;Parent=MS.gene029300.t1 |
| chr1.4 | exon | 86409498 | 86409579 | 86409498 | ID=MS.gene029300.t1.exon5;Parent=MS.gene029300.t1 |
| chr1.4 | CDS | 86409498 | 86409579 | 86409498 | ID=cds.MS.gene029300.t1;Parent=MS.gene029300.t1 |
| chr1.4 | exon | 86408924 | 86408996 | 86408924 | ID=MS.gene029300.t1.exon6;Parent=MS.gene029300.t1 |
| chr1.4 | CDS | 86408924 | 86408996 | 86408924 | ID=cds.MS.gene029300.t1;Parent=MS.gene029300.t1 |
| chr1.4 | exon | 86408752 | 86408843 | 86408752 | ID=MS.gene029300.t1.exon7;Parent=MS.gene029300.t1 |
| chr1.4 | CDS | 86408752 | 86408843 | 86408752 | ID=cds.MS.gene029300.t1;Parent=MS.gene029300.t1 |
| chr1.4 | exon | 86408582 | 86408656 | 86408582 | ID=MS.gene029300.t1.exon8;Parent=MS.gene029300.t1 |
| chr1.4 | CDS | 86408582 | 86408656 | 86408582 | ID=cds.MS.gene029300.t1;Parent=MS.gene029300.t1 |
| chr1.4 | exon | 86408377 | 86408484 | 86408377 | ID=MS.gene029300.t1.exon9;Parent=MS.gene029300.t1 |
| chr1.4 | CDS | 86408377 | 86408484 | 86408377 | ID=cds.MS.gene029300.t1;Parent=MS.gene029300.t1 |
| chr1.4 | exon | 86408215 | 86408292 | 86408215 | ID=MS.gene029300.t1.exon10;Parent=MS.gene029300.t1 |
| chr1.4 | CDS | 86408215 | 86408292 | 86408215 | ID=cds.MS.gene029300.t1;Parent=MS.gene029300.t1 |
| chr1.4 | exon | 86407954 | 86407998 | 86407954 | ID=MS.gene029300.t1.exon11;Parent=MS.gene029300.t1 |
| chr1.4 | CDS | 86407954 | 86407998 | 86407954 | ID=cds.MS.gene029300.t1;Parent=MS.gene029300.t1 |
| chr1.4 | exon | 86407736 | 86407850 | 86407736 | ID=MS.gene029300.t1.exon12;Parent=MS.gene029300.t1 |
| chr1.4 | CDS | 86407736 | 86407850 | 86407736 | ID=cds.MS.gene029300.t1;Parent=MS.gene029300.t1 |
| chr1.4 | exon | 86407612 | 86407634 | 86407612 | ID=MS.gene029300.t1.exon13;Parent=MS.gene029300.t1 |
| chr1.4 | CDS | 86407612 | 86407634 | 86407612 | ID=cds.MS.gene029300.t1;Parent=MS.gene029300.t1 |
| Gene Sequence |
| Protein sequence |
