AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065032


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065032.t1 MTR_1g112510 99.482 386 2 0 127 512 1 386 0.0 797
MS.gene065032.t1 MTR_4g012960 33.448 290 166 5 186 475 43 305 3.78e-38 142
MS.gene065032.t1 MTR_4g013090 33.681 288 161 7 192 476 49 309 6.66e-38 141
MS.gene065032.t1 MTR_4g013100 33.798 287 160 6 192 475 50 309 2.54e-36 137
MS.gene065032.t1 MTR_4g005880 34.228 298 173 7 176 472 117 392 4.72e-34 136
MS.gene065032.t1 MTR_1g107480 33.564 289 162 8 189 472 96 359 1.37e-28 120
MS.gene065032.t1 MTR_8g033400 27.419 248 157 4 220 466 94 319 8.35e-27 111
MS.gene065032.t1 MTR_8g033410 27.344 256 166 2 220 475 86 321 1.02e-26 110
MS.gene065032.t1 MTR_8g033390 28.175 252 151 6 220 466 83 309 3.84e-26 109
MS.gene065032.t1 MTR_4g013135 33.333 285 164 7 192 475 49 308 7.53e-26 108
MS.gene065032.t1 MTR_2g101840 29.771 262 157 3 217 475 72 309 2.58e-24 103
MS.gene065032.t1 MTR_6g007170 27.049 244 139 7 220 451 129 345 5.27e-11 64.7
MS.gene065032.t1 MTR_7g078990 24.820 278 176 8 226 491 88 344 8.42e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065032.t1 AT1G68010 88.860 386 43 0 127 512 1 386 0.0 701
MS.gene065032.t1 AT1G68010 88.630 387 43 1 127 512 1 387 0.0 696
MS.gene065032.t1 AT1G68010 90.909 341 31 0 127 467 1 341 0.0 629
MS.gene065032.t1 AT4G34200 34.737 285 164 6 189 472 102 365 8.38e-33 132
MS.gene065032.t1 AT1G17745 32.558 344 192 11 136 472 76 386 3.08e-32 130
MS.gene065032.t1 AT1G79870 31.560 282 167 6 192 472 49 305 1.31e-31 124
MS.gene065032.t1 AT3G19480 33.221 298 176 7 176 472 75 350 3.21e-29 122
MS.gene065032.t1 AT1G17745 30.435 368 195 11 136 472 76 413 7.05e-28 118
MS.gene065032.t1 AT1G79870 29.180 305 161 7 171 472 34 286 4.70e-26 108
MS.gene065032.t1 AT1G12550 27.413 259 163 5 220 476 82 317 6.70e-26 108
MS.gene065032.t1 AT2G45630 28.346 254 154 5 222 473 100 327 3.41e-23 100
MS.gene065032.t1 AT1G72190 26.966 267 173 8 214 475 117 366 9.93e-16 79.3

Find 114 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATGATGTGTAGAGGATTT+TGG 0.254421 1.2:+83274125 None:intergenic
AGCATATGGTGCTTTCTTAA+AGG 0.276108 1.2:-83271703 MS.gene065032:CDS
AACCAGTTTCAATTCAAGTA+TGG 0.311416 1.2:-83273915 MS.gene065032:CDS
GATAAGTGTGATGGAGTTAT+TGG 0.337723 1.2:-83273636 MS.gene065032:CDS
TCTAAATTCATCCATTTCAT+TGG 0.349195 1.2:-83274069 MS.gene065032:CDS
GTCAATGCTGCAAACAAATA+TGG 0.354110 1.2:-83273049 MS.gene065032:CDS
TTCCATACTTGAATTGAAAC+TGG 0.356787 1.2:+83273913 None:intergenic
AGGCAAAGCTTTCAGTAATA+TGG 0.369024 1.2:-83273095 MS.gene065032:CDS
GGACAAACAGTTGGTGTTAT+CGG 0.377915 1.2:-83272415 MS.gene065032:CDS
TTTCTGCTGTATCAGGTTGA+AGG 0.378719 1.2:-83271869 MS.gene065032:intron
GAAGGTGAGGGAGGAGAGTC+CGG 0.386955 1.2:+83275253 None:intergenic
AACTCTAACCTTCTTCATCT+TGG 0.389875 1.2:+83271453 None:intergenic
TGTTTATCGGGCAGATTTGT+TGG 0.390978 1.2:-83272451 MS.gene065032:intron
TTCTCTGCTTTGAGCAAAGC+AGG 0.391693 1.2:-83273118 MS.gene065032:CDS
AGATTGATCCAACGAGTTCC+AGG 0.398695 1.2:+83273850 None:intergenic
GATTAGTCTTCATCCTATCT+TGG 0.399037 1.2:-83271515 MS.gene065032:CDS
CAGTATGGTTTGATGCCAAT+AGG 0.402824 1.2:-83270689 MS.gene065032:CDS
GTTATCGGAGCTGGCCGTAT+TGG 0.403616 1.2:-83272400 MS.gene065032:CDS
TATGTTTCTGACCAATGAAA+TGG 0.405529 1.2:+83274058 None:intergenic
AAGAAATGGCTCCACCCTAT+TGG 0.407299 1.2:+83270674 None:intergenic
GGTAGAGATCGAAGTATATC+AGG 0.410543 1.2:+83271834 None:intergenic
AGATCAAGGGCTACCCAGTA+TGG 0.420729 1.2:-83270704 MS.gene065032:CDS
CTATTGGCATCAAACCATAC+TGG 0.422550 1.2:+83270690 None:intergenic
CGTAGGCCTTGATGTGTTTG+AGG 0.424117 1.2:-83271256 MS.gene065032:intron
ATACACTACAGCTTTGAAAC+TGG 0.431086 1.2:+83270487 None:intergenic
TTCTTCAACTCTGCAAGTCC+AGG 0.432293 1.2:+83271132 None:intergenic
TTCTTACTATATCTGCCTCT+TGG 0.435870 1.2:+83271625 None:intergenic
TGACTTTGGCAGCTGCTAGA+AGG 0.446003 1.2:-83272670 MS.gene065032:CDS
GCTTGCAGCTTCACTGACTT+TGG 0.451429 1.2:-83272684 MS.gene065032:CDS
GAAGATATCATTGCTTTGAT+TGG 0.457462 1.2:-83273660 MS.gene065032:CDS
ACAATGCTTGGGCATGCAGC+TGG 0.459559 1.2:+83270633 None:intergenic
GAGGAAGAAGCGGTTGTTGA+TGG 0.459692 1.2:+83275277 None:intergenic
GGTGCTTTCTTAAAGGCAAA+TGG 0.460883 1.2:-83271696 MS.gene065032:CDS
AGTGCAACTTCATCAATAAC+AGG 0.463873 1.2:+83271312 None:intergenic
AAACACCAGTAACTTGGAAA+AGG 0.465743 1.2:-83271671 MS.gene065032:CDS
TATAATACAGGGCAAGATCA+AGG 0.470540 1.2:-83270718 MS.gene065032:intron
CTTGTTGACGAGGTGGTAAG+TGG 0.472748 1.2:+83271486 None:intergenic
AGTATGGTTTGATGCCAATA+GGG 0.473886 1.2:-83270688 MS.gene065032:CDS
ACACATTGCTTCTGCTTCCA+AGG 0.479271 1.2:-83271094 MS.gene065032:intron
AACAAATATGGTGTTGCTGT+TGG 0.490286 1.2:-83273037 MS.gene065032:CDS
TTGGAAAAGGGCAGCATCCA+TGG 0.493217 1.2:-83271658 MS.gene065032:CDS
ATGGTGAAACACCAGTAACT+TGG 0.493816 1.2:-83271677 MS.gene065032:CDS
TTCTGCTGTATCAGGTTGAA+GGG 0.494245 1.2:-83271868 MS.gene065032:intron
TGACTCACTCACTGATTCAA+TGG 0.499749 1.2:-83273941 MS.gene065032:CDS
ATTCAAGTATGGAACCCAAA+TGG 0.502702 1.2:-83273904 MS.gene065032:CDS
GCTTTCAGTAATATGGCTGT+TGG 0.504769 1.2:-83273088 MS.gene065032:CDS
GCAAGTCCAGGTTTCATGTA+GGG 0.504842 1.2:+83271144 None:intergenic
CGAGTCTTTCCTTGTTGACG+AGG 0.512210 1.2:+83271476 None:intergenic
ACAGTTGGTGTTATCGGAGC+TGG 0.526985 1.2:-83272409 MS.gene065032:CDS
GCAGATGAGTTCATGAGGGC+AGG 0.528261 1.2:-83272638 MS.gene065032:CDS
GCAGTGGACTCGTGAGGGAA+TGG 0.533885 1.2:-83270860 MS.gene065032:intron
AACACCAGTAACTTGGAAAA+GGG 0.538959 1.2:-83271670 MS.gene065032:CDS
TTGCATAAGCTGATCCAATA+CGG 0.539584 1.2:+83272386 None:intergenic
TCAAGGCCTACGCGAAACAT+TGG 0.540440 1.2:+83271267 None:intergenic
GTAGTAGTGATTGAGTGATT+CGG 0.548176 1.2:+83274012 None:intergenic
TGCAAGTCCAGGTTTCATGT+AGG 0.550331 1.2:+83271143 None:intergenic
AGACAAGTGAGACGAAGGTG+AGG 0.554257 1.2:+83275240 None:intergenic
CTCTTGGAGAACCTCGTCCA+TGG 0.559767 1.2:+83271641 None:intergenic
GTCTTTCCTTGTTGACGAGG+TGG 0.560436 1.2:+83271479 None:intergenic
AGAGTCCGGCGAGGAAGAAG+CGG 0.560799 1.2:+83275267 None:intergenic
GCTAGCAGCTCTAAATGTGC+TGG 0.561333 1.2:-83270833 MS.gene065032:intron
GTGTGATGGAGTTATTGGAC+AGG 0.566011 1.2:-83273631 MS.gene065032:intron
CAATTACCTCAAACACATCA+AGG 0.566746 1.2:+83271250 None:intergenic
AACAACCGCTTCTTCCTCGC+CGG 0.566756 1.2:-83275272 MS.gene065032:CDS
GGGCAGGATTATATGATGGC+TGG 0.567472 1.2:-83272622 MS.gene065032:CDS
TATTGATGAAGTTGCACTTG+TGG 0.567753 1.2:-83271307 MS.gene065032:CDS
CACTTACCACCTCGTCAACA+AGG 0.569943 1.2:-83271485 MS.gene065032:CDS
ATTCTTATAAACTGCAGTAG+AGG 0.572235 1.2:-83271336 MS.gene065032:CDS
GTTAGCACAAAATCAATGCC+TGG 0.572324 1.2:-83273868 MS.gene065032:CDS
ATTTGTTGGAAACTTGCTCA+AGG 0.580236 1.2:-83272437 MS.gene065032:CDS
ATGAGGGCAGGATTATATGA+TGG 0.580751 1.2:-83272626 MS.gene065032:CDS
TTTGCAGCTGACTGAAGACT+GGG 0.581414 1.2:-83273152 MS.gene065032:intron
ATCAGCTTATGCAAGAATGA+TGG 0.584719 1.2:-83272377 MS.gene065032:intron
GACAAGTGAGACGAAGGTGA+GGG 0.584931 1.2:+83275241 None:intergenic
AGACTAGAAAAGTTTGTCAC+AGG 0.585130 1.2:-83271803 MS.gene065032:intron
TTATTGAATTCAGATATGTA+CGG 0.587056 1.2:-83273706 MS.gene065032:intron
AATCAATGCCTGGAACTCGT+TGG 0.587209 1.2:-83273858 MS.gene065032:CDS
TTGATTGGTGATAAGTGTGA+TGG 0.588494 1.2:-83273645 MS.gene065032:CDS
GGGAGTTCTCACAGAGACTA+CGG 0.589946 1.2:-83272711 MS.gene065032:CDS
TTTGTTGGAAACTTGCTCAA+GGG 0.594105 1.2:-83272436 MS.gene065032:CDS
GATGAGCCCTACATGAAACC+TGG 0.594414 1.2:-83271150 MS.gene065032:CDS
ATAATACAGGGCAAGATCAA+GGG 0.598270 1.2:-83270717 MS.gene065032:intron
CACTTGTCTTCACCGATGTG+TGG 0.601184 1.2:-83275226 MS.gene065032:CDS
AAGACTCGCCAAGATGAAGA+AGG 0.601821 1.2:-83271461 MS.gene065032:intron
TTGCTCAAGGGACAAACAGT+TGG 0.607085 1.2:-83272424 MS.gene065032:CDS
AAGTGAGACGAAGGTGAGGG+AGG 0.607819 1.2:+83275244 None:intergenic
TATTGGCATCAAACCATACT+GGG 0.608430 1.2:+83270691 None:intergenic
GGTTGTTGATGGAGCAGCGG+AGG 0.612070 1.2:+83275288 None:intergenic
TTGAGGCAGATGAGTTCATG+AGG 0.619999 1.2:-83272643 MS.gene065032:CDS
TGGCTCAACACGATTGTCGT+TGG 0.621551 1.2:-83275206 MS.gene065032:CDS
AAGGGCAGCATCCATGGACG+AGG 0.621564 1.2:-83271652 MS.gene065032:CDS
TTGAATCAGTGAGTGAGTCA+AGG 0.624272 1.2:+83273944 None:intergenic
AGCGGTTGTTGATGGAGCAG+CGG 0.636572 1.2:+83275285 None:intergenic
GAAAATCCAATGTTTCGCGT+AGG 0.638637 1.2:-83271273 MS.gene065032:CDS
AGCTGCTAGAAGGATAGTTG+AGG 0.641144 1.2:-83272660 MS.gene065032:CDS
ATGGTTTGATGCCAATAGGG+TGG 0.649631 1.2:-83270685 MS.gene065032:CDS
TGAGGCAGATGAGTTCATGA+GGG 0.651617 1.2:-83272642 MS.gene065032:CDS
AGTGATTCGGTGTGAAACAG+TGG 0.663359 1.2:+83274025 None:intergenic
TCTGCTTTGAGCAAAGCAGG+AGG 0.664158 1.2:-83273115 MS.gene065032:CDS
CATGGACGAGGTTCTCCAAG+AGG 0.666582 1.2:-83271640 MS.gene065032:CDS
TGAGGGAGGAGAGTCCGGCG+AGG 0.673430 1.2:+83275258 None:intergenic
GCAGCGGAGGACAAAGACGA+CGG 0.673519 1.2:+83275301 None:intergenic
ATGCTTGGGCATGCAGCTGG+AGG 0.674932 1.2:+83270636 None:intergenic
GATTGTCGTTGGAACCGCAG+TGG 0.676170 1.2:-83275195 MS.gene065032:CDS
CATGGAATGATGATGTGTAG+AGG 0.682056 1.2:+83274118 None:intergenic
GGTGAAGACAAGTGAGACGA+AGG 0.682942 1.2:+83275235 None:intergenic
GTGTTTGCAGTGGACTCGTG+AGG 0.684941 1.2:-83270866 MS.gene065032:intron
TGTTTGCAGTGGACTCGTGA+GGG 0.684969 1.2:-83270865 MS.gene065032:intron
AATCGTGTTGAGCCACACAT+CGG 0.688768 1.2:+83275214 None:intergenic
AGCAATGTGTGGTACTACAA+CGG 0.690341 1.2:+83271107 None:intergenic
TTGCAGCTGACTGAAGACTG+GGG 0.715483 1.2:-83273151 MS.gene065032:intron
TTGGAAGCAGAAGCAATGTG+TGG 0.717012 1.2:+83271096 None:intergenic
AATCAGTGAGTGAGTCAAGG+TGG 0.767796 1.2:+83273947 None:intergenic
CGGTGTGAAAACAACCACTG+CGG 0.772792 1.2:+83275181 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTATTTTTAAATTAT+AGG - chr1.2:83272282-83272301 MS.gene065032:intron 0.0%
!!! CACATATAAATTTTTTTTTT+TGG + chr1.2:83271412-83271431 None:intergenic 10.0%
!!! TTTTAAATTATAGGTTTTTT+TGG - chr1.2:83272291-83272310 MS.gene065032:intron 10.0%
!! GAAATAGGATAAATATAAAA+TGG - chr1.2:83271537-83271556 MS.gene065032:intron 15.0%
!! TCATCATAAACTAAATTATT+AGG + chr1.2:83274256-83274275 None:intergenic 15.0%
!!! AGTTTAAATTTTAACATAAG+AGG - chr1.2:83272553-83272572 MS.gene065032:intron 15.0%
!!! ATTTACATTTTAAATGTATG+TGG - chr1.2:83272847-83272866 MS.gene065032:intron 15.0%
!!! CTTCAAATATAAATAGATTT+TGG - chr1.2:83271196-83271215 MS.gene065032:intron 15.0%
!!! GTTTTATTTCCAATAATATT+TGG + chr1.2:83275242-83275261 None:intergenic 15.0%
!!! TAAATTTGCATTTTTTTAGA+CGG - chr1.2:83270893-83270912 MS.gene065032:intron 15.0%
!!! TCTAAATAGCTATTTTTTAT+TGG - chr1.2:83272374-83272393 MS.gene065032:intron 15.0%
!!! TTTTTTTATTCTGTACTTTT+TGG + chr1.2:83270660-83270679 None:intergenic 15.0%
!!! TTTTTTTTATTTGACTTAGT+TGG - chr1.2:83271280-83271299 MS.gene065032:CDS 15.0%
!! AAAAAAAGTTCTATCATCTT+TGG + chr1.2:83271265-83271284 None:intergenic 20.0%
!! AAAAATGCAAATTTACTATG+TGG + chr1.2:83270888-83270907 None:intergenic 20.0%
!! AATCTTAAGTAAAACAAGAA+AGG + chr1.2:83273231-83273250 None:intergenic 20.0%
!! AATTAATCTCTTGACATAAT+TGG - chr1.2:83270933-83270952 MS.gene065032:intron 20.0%
!! AGGTTAGTAATTAAAATAGA+AGG - chr1.2:83270761-83270780 MS.gene065032:intron 20.0%
!! AGTTGCTAATAAAAATTACT+TGG - chr1.2:83273540-83273559 MS.gene065032:intron 20.0%
!! ATAAATCGAATTTATTGTGT+TGG - chr1.2:83271512-83271531 MS.gene065032:CDS 20.0%
!! ATAACTAAAATTGATTACCT+TGG + chr1.2:83274728-83274747 None:intergenic 20.0%
!! ATCCATTTAAACAAATCATA+GGG + chr1.2:83274030-83274049 None:intergenic 20.0%
!! GGTTAGTAATTAAAATAGAA+GGG - chr1.2:83270762-83270781 MS.gene065032:intron 20.0%
!! TAAATCGAATTTATTGTGTT+GGG - chr1.2:83271513-83271532 MS.gene065032:CDS 20.0%
!! TATCCATTTAAACAAATCAT+AGG + chr1.2:83274031-83274050 None:intergenic 20.0%
!! TCACATTAACTTCAAATAAA+AGG - chr1.2:83271652-83271671 MS.gene065032:CDS 20.0%
!! TTATTGAATTCAGATATGTA+CGG - chr1.2:83272096-83272115 MS.gene065032:intron 20.0%
!!! ACAGTTTTGATTTTGTTTAT+CGG - chr1.2:83273338-83273357 MS.gene065032:intron 20.0%
!!! ATAGTTTTTCTTTTTCTAAG+AGG - chr1.2:83270964-83270983 MS.gene065032:intron 20.0%
!!! ATATTGCATTTTATATTCAG+GGG - chr1.2:83271336-83271355 MS.gene065032:CDS 20.0%
!!! ATTCTAAGTTAACAGATTTT+TGG + chr1.2:83273846-83273865 None:intergenic 20.0%
!!! GATATTGCATTTTATATTCA+GGG - chr1.2:83271335-83271354 MS.gene065032:CDS 20.0%
!!! TATATTTTATTTCTAATCGC+AGG - chr1.2:83275288-83275307 MS.gene065032:CDS 20.0%
!!! TGTGAAAAGAATCTTTTTTT+AGG + chr1.2:83274877-83274896 None:intergenic 20.0%
!!! TTTTATTTGAAGTTAATGTG+AGG + chr1.2:83271653-83271672 None:intergenic 20.0%
! AAACATGTCAAAATTAGTGT+TGG - chr1.2:83271106-83271125 MS.gene065032:CDS 25.0%
! AAATTATATGTGAAGTTAGC+TGG - chr1.2:83271308-83271327 MS.gene065032:CDS 25.0%
! AATTTACATTGATCAAACGT+AGG + chr1.2:83275028-83275047 None:intergenic 25.0%
! ATAAAAAAAAGAGAAGCTAG+TGG - chr1.2:83273749-83273768 MS.gene065032:intron 25.0%
! ATATTGTGAATCAAGAATAG+AGG - chr1.2:83272477-83272496 MS.gene065032:intron 25.0%
! ATTGTCACGATATTCAAATT+TGG - chr1.2:83273799-83273818 MS.gene065032:intron 25.0%
! GACTTGGCATAAAATTAAAA+CGG - chr1.2:83273575-83273594 MS.gene065032:intron 25.0%
! GTGAAAAATGTTATTACTCA+GGG + chr1.2:83275206-83275225 None:intergenic 25.0%
! TAATGATATATTCTTATCGC+AGG - chr1.2:83274438-83274457 MS.gene065032:intron 25.0%
! TATTGTGAATCAAGAATAGA+GGG - chr1.2:83272478-83272497 MS.gene065032:intron 25.0%
! TCATCCTAATAAAAATCACA+TGG + chr1.2:83274637-83274656 None:intergenic 25.0%
! TCTAAATTCATCCATTTCAT+TGG - chr1.2:83271733-83271752 MS.gene065032:intron 25.0%
! TTAATTACTAACCTACTAAC+CGG + chr1.2:83270755-83270774 None:intergenic 25.0%
! TTCATATCATTCATTGTGTT+TGG - chr1.2:83273066-83273085 MS.gene065032:CDS 25.0%
! TTTAACATAAAAGCAACTCT+CGG - chr1.2:83272592-83272611 MS.gene065032:intron 25.0%
!! AATGCAAATCTGAAATGTAT+GGG + chr1.2:83273458-83273477 None:intergenic 25.0%
!! AATTAAAATAGAAGGGTATG+TGG - chr1.2:83270769-83270788 MS.gene065032:intron 25.0%
!! AATTTTCCCTCAAAAAAGAA+AGG + chr1.2:83270714-83270733 None:intergenic 25.0%
!! GGATATTGCATTTTATATTC+AGG - chr1.2:83271334-83271353 MS.gene065032:CDS 25.0%
!!! ATGTGGTTTTTTTTACTTCT+GGG - chr1.2:83272318-83272337 MS.gene065032:intron 25.0%
!!! CAGTTTTGATTTTGTTTATC+GGG - chr1.2:83273339-83273358 MS.gene065032:intron 25.0%
!!! GAAAAGAATCTTTTTTTAGG+TGG + chr1.2:83274874-83274893 None:intergenic 25.0%
!!! GAAGTTATTTGTTATAACCT+TGG - chr1.2:83273042-83273061 MS.gene065032:CDS 25.0%
!!! GTTTATTTTTCATACAGATG+AGG + chr1.2:83273209-83273228 None:intergenic 25.0%
!!! TAAGTTAACAGATTTTTGGA+AGG + chr1.2:83273842-83273861 None:intergenic 25.0%
!!! TATGTGGTTTTTTTTACTTC+TGG - chr1.2:83272317-83272336 MS.gene065032:intron 25.0%
!!! TTTAGAAGACTTTGACTTTT+TGG + chr1.2:83271719-83271738 None:intergenic 25.0%
AACCAGTTTCAATTCAAGTA+TGG - chr1.2:83271887-83271906 MS.gene065032:intron 30.0%
ACAATTTAATTGTGGAGAAG+TGG + chr1.2:83271384-83271403 None:intergenic 30.0%
ATCATTCATTGTGTTTGGTA+GGG - chr1.2:83273071-83273090 MS.gene065032:CDS 30.0%
ATGTATATGTGATGCTGAAT+CGG - chr1.2:83272964-83272983 MS.gene065032:intron 30.0%
ATTCTTATAAACTGCAGTAG+AGG - chr1.2:83274466-83274485 MS.gene065032:intron 30.0%
ATTGTGAATCAAGAATAGAG+GGG - chr1.2:83272479-83272498 MS.gene065032:intron 30.0%
ATTTATGCCAAAACTAGTGT+AGG - chr1.2:83271016-83271035 MS.gene065032:intron 30.0%
CAATGAATGATATGAAACCA+AGG + chr1.2:83273062-83273081 None:intergenic 30.0%
CAATTTAATTGTGGAGAAGT+GGG + chr1.2:83271383-83271402 None:intergenic 30.0%
GAAGATATCATTGCTTTGAT+TGG - chr1.2:83272142-83272161 MS.gene065032:intron 30.0%
GGTGAAAAATGTTATTACTC+AGG + chr1.2:83275207-83275226 None:intergenic 30.0%
TATCATTCATTGTGTTTGGT+AGG - chr1.2:83273070-83273089 MS.gene065032:CDS 30.0%
TCAAAGTTATCATGTATGCT+TGG - chr1.2:83272894-83272913 MS.gene065032:intron 30.0%
TGTTAGTGTCAAAATGATAC+AGG + chr1.2:83272820-83272839 None:intergenic 30.0%
TTAAATACTCTCCCTATGAT+TGG + chr1.2:83270797-83270816 None:intergenic 30.0%
TTAACATAAAAGCAACTCTC+GGG - chr1.2:83272593-83272612 MS.gene065032:intron 30.0%
TTCCATACTTGAATTGAAAC+TGG + chr1.2:83271892-83271911 None:intergenic 30.0%
TTCTTTGTTGAGTCAATCAA+TGG - chr1.2:83272051-83272070 MS.gene065032:intron 30.0%
TTTATTGTGTTGGGAGAAAT+AGG - chr1.2:83271522-83271541 MS.gene065032:intron 30.0%
! ATGTACTAAAGTGTTTATCG+AGG - chr1.2:83272525-83272544 MS.gene065032:intron 30.0%
! CAATGCAAATCTGAAATGTA+TGG + chr1.2:83273459-83273478 None:intergenic 30.0%
! CTTTTGCATTAACAATGCTT+GGG + chr1.2:83275183-83275202 None:intergenic 30.0%
! GACACCATGTGATTTTTATT+AGG - chr1.2:83274630-83274649 MS.gene065032:intron 30.0%
! GCTCATCAGTTTTACAAAAT+AGG + chr1.2:83275059-83275078 None:intergenic 30.0%
! TATGTTTCTGACCAATGAAA+TGG + chr1.2:83271747-83271766 None:intergenic 30.0%
! TATTTGAAGTTAATGTGAGG+AGG + chr1.2:83271650-83271669 None:intergenic 30.0%
! TGAGCATTTTCATCAAGAAA+TGG + chr1.2:83275145-83275164 None:intergenic 30.0%
! TTTTTCCTTATTGCAGCATA+TGG - chr1.2:83274085-83274104 MS.gene065032:CDS 30.0%
!! AATAGTGATTAGTCTTGATG+AGG - chr1.2:83273020-83273039 MS.gene065032:intron 30.0%
!! GTCCCTATGATTTGTTTAAA+TGG - chr1.2:83274025-83274044 MS.gene065032:CDS 30.0%
!! TGTTAGTGGTTAGTTTACTA+AGG + chr1.2:83274842-83274861 None:intergenic 30.0%
!!! ACTTTCACCTTTCTTTTTTG+AGG - chr1.2:83270704-83270723 MS.gene065032:CDS 30.0%
!!! ACTTTTCTAGTCTTGTAGAT+TGG + chr1.2:83273992-83274011 None:intergenic 30.0%
!!! CTTTCACCTTTCTTTTTTGA+GGG - chr1.2:83270705-83270724 MS.gene065032:CDS 30.0%
!!! TAAGTGGTTTTATCCAAGAT+AGG + chr1.2:83274303-83274322 None:intergenic 30.0%
!!! TAGGTTTTTTTGGTTGTATG+TGG - chr1.2:83272301-83272320 MS.gene065032:intron 30.0%
!!! TGTGGTTTTTTTTACTTCTG+GGG - chr1.2:83272319-83272338 MS.gene065032:intron 30.0%
AAACACCAGTAACTTGGAAA+AGG - chr1.2:83274131-83274150 MS.gene065032:CDS 35.0%
AAATTACTTATGGCATCACG+TGG - chr1.2:83274396-83274415 MS.gene065032:intron 35.0%
AACACCAGTAACTTGGAAAA+GGG - chr1.2:83274132-83274151 MS.gene065032:intron 35.0%
AACTCTAACCTTCTTCATCT+TGG + chr1.2:83274352-83274371 None:intergenic 35.0%
AATATTTGGCCCAAGTGAAA+GGG + chr1.2:83275228-83275247 None:intergenic 35.0%
AATCACATGGTGTCTTGAAA+AGG + chr1.2:83274624-83274643 None:intergenic 35.0%
AGACTAGAAAAGTTTGTCAC+AGG - chr1.2:83273999-83274018 MS.gene065032:CDS 35.0%
AGCATATGGTGCTTTCTTAA+AGG - chr1.2:83274099-83274118 MS.gene065032:CDS 35.0%
AGGCAAAGCTTTCAGTAATA+TGG - chr1.2:83272707-83272726 MS.gene065032:CDS 35.0%
AGTATGGTTTGATGCCAATA+GGG - chr1.2:83275114-83275133 MS.gene065032:intron 35.0%
ATAATACAGGGCAAGATCAA+GGG - chr1.2:83275085-83275104 MS.gene065032:intron 35.0%
ATATGTGAAGTTAGCTGGTA+GGG - chr1.2:83271313-83271332 MS.gene065032:CDS 35.0%
ATCAGCTTATGCAAGAATGA+TGG - chr1.2:83273425-83273444 MS.gene065032:intron 35.0%
ATCCTACTTGAAAGTTCTCT+AGG - chr1.2:83273603-83273622 MS.gene065032:intron 35.0%
ATGAAGAAGGTTAGAGTTCA+AGG - chr1.2:83274354-83274373 MS.gene065032:intron 35.0%
ATGAGCCTCCTTATAATACA+GGG - chr1.2:83275073-83275092 MS.gene065032:intron 35.0%
ATGTCTATCCATACCATTTC+AGG - chr1.2:83273480-83273499 MS.gene065032:intron 35.0%
ATTCAAGTATGGAACCCAAA+TGG - chr1.2:83271898-83271917 MS.gene065032:intron 35.0%
CAATTACCTCAAACACATCA+AGG + chr1.2:83274555-83274574 None:intergenic 35.0%
CTCTAGGTCACATAATATCT+AGG - chr1.2:83273619-83273638 MS.gene065032:intron 35.0%
GAATGAAAGAGAAAGCTTAC+AGG + chr1.2:83272798-83272817 None:intergenic 35.0%
GTAGTAGTGATTGAGTGATT+CGG + chr1.2:83271793-83271812 None:intergenic 35.0%
GTCAATGCTGCAAACAAATA+TGG - chr1.2:83272753-83272772 MS.gene065032:intron 35.0%
GTGTTGAGATAGATAGATAG+GGG + chr1.2:83271620-83271639 None:intergenic 35.0%
TAATATTTGGCCCAAGTGAA+AGG + chr1.2:83275229-83275248 None:intergenic 35.0%
TATAATACAGGGCAAGATCA+AGG - chr1.2:83275084-83275103 MS.gene065032:intron 35.0%
TATATGTGAAGTTAGCTGGT+AGG - chr1.2:83271312-83271331 MS.gene065032:CDS 35.0%
TATCATGTATGCTTGGATGA+GGG - chr1.2:83272901-83272920 MS.gene065032:intron 35.0%
TATTGATGAAGTTGCACTTG+TGG - chr1.2:83274495-83274514 MS.gene065032:intron 35.0%
TATTGGCATCAAACCATACT+GGG + chr1.2:83275114-83275133 None:intergenic 35.0%
TCAATCAAGTGAACCTGAAA+TGG + chr1.2:83273496-83273515 None:intergenic 35.0%
TCACTTGGGCCAAATATTAT+TGG - chr1.2:83275230-83275249 MS.gene065032:CDS 35.0%
TGAAGAAGGTTAGAGTTCAA+GGG - chr1.2:83274355-83274374 MS.gene065032:intron 35.0%
TGATCTTGCCCTGTATTATA+AGG + chr1.2:83275084-83275103 None:intergenic 35.0%
TGCTGAATCGGTTGTAATTA+TGG - chr1.2:83272976-83272995 MS.gene065032:intron 35.0%
TGGCTCACACAATTTAATTG+TGG + chr1.2:83271392-83271411 None:intergenic 35.0%
TGGGACTTAGAATTAAGTAC+AGG - chr1.2:83274784-83274803 MS.gene065032:intron 35.0%
TGTTGAGATAGATAGATAGG+GGG + chr1.2:83271619-83271638 None:intergenic 35.0%
TTATCATGTATGCTTGGATG+AGG - chr1.2:83272900-83272919 MS.gene065032:intron 35.0%
TTCAAATTTGGCCAAGTTAC+TGG - chr1.2:83273811-83273830 MS.gene065032:intron 35.0%
TTCTTACTATATCTGCCTCT+TGG + chr1.2:83274180-83274199 None:intergenic 35.0%
TTGCATAAGCTGATCCAATA+CGG + chr1.2:83273419-83273438 None:intergenic 35.0%
TTGTGAATCAAGAATAGAGG+GGG - chr1.2:83272480-83272499 MS.gene065032:intron 35.0%
TTGTTATCCAAAAGCAGACA+AGG + chr1.2:83274580-83274599 None:intergenic 35.0%
! AATTGAACCTTGTCTGCTTT+TGG - chr1.2:83274570-83274589 MS.gene065032:intron 35.0%
! ACATTTTTCACCCTTTCACT+TGG - chr1.2:83275215-83275234 MS.gene065032:CDS 35.0%
! ACGACTCTGTATTTTCCATT+TGG + chr1.2:83271916-83271935 None:intergenic 35.0%
! ATTTGTTGGAAACTTGCTCA+AGG - chr1.2:83273365-83273384 MS.gene065032:intron 35.0%
! CATTTTTCACCCTTTCACTT+GGG - chr1.2:83275216-83275235 MS.gene065032:CDS 35.0%
! CGACTCTGTATTTTCCATTT+GGG + chr1.2:83271915-83271934 None:intergenic 35.0%
! GATAAGTGTGATGGAGTTAT+TGG - chr1.2:83272166-83272185 MS.gene065032:intron 35.0%
! GATGAACGAACTTTTCGTAA+CGG + chr1.2:83271834-83271853 None:intergenic 35.0%
! GCTTTTGCATTAACAATGCT+TGG + chr1.2:83275184-83275203 None:intergenic 35.0%
! GGTGTTGAGATAGATAGATA+GGG + chr1.2:83271621-83271640 None:intergenic 35.0%
! GTTAGTTTACTAAGGAGAAG+GGG + chr1.2:83274834-83274853 None:intergenic 35.0%
! TGATTCTTTTCTGCTGTATC+AGG - chr1.2:83273926-83273945 MS.gene065032:CDS 35.0%
! TGCATTTTATATTCAGGGGT+CGG - chr1.2:83271340-83271359 MS.gene065032:CDS 35.0%
! TTGATTGGTGATAAGTGTGA+TGG - chr1.2:83272157-83272176 MS.gene065032:intron 35.0%
! TTTGTTGGAAACTTGCTCAA+GGG - chr1.2:83273366-83273385 MS.gene065032:intron 35.0%
!! AACAAATATGGTGTTGCTGT+TGG - chr1.2:83272765-83272784 MS.gene065032:intron 35.0%
!! AGGTGTTGAGATAGATAGAT+AGG + chr1.2:83271622-83271641 None:intergenic 35.0%
!! GATGAGTTGATGTAACGTTT+AGG + chr1.2:83271591-83271610 None:intergenic 35.0%
!! GATTAGTCTTCATCCTATCT+TGG - chr1.2:83274287-83274306 MS.gene065032:intron 35.0%
!! GGTTAGTTTACTAAGGAGAA+GGG + chr1.2:83274835-83274854 None:intergenic 35.0%
!! TGATGATGTGTAGAGGATTT+TGG + chr1.2:83271680-83271699 None:intergenic 35.0%
!! TGGTTAGTTTACTAAGGAGA+AGG + chr1.2:83274836-83274855 None:intergenic 35.0%
!!! ACTTTTTGGTTGCTTGATCA+TGG + chr1.2:83271705-83271724 None:intergenic 35.0%
!!! TTGGTTTTTGAGTACTGACT+TGG - chr1.2:83273559-83273578 MS.gene065032:intron 35.0%
AAGCACCATATGCTGCAATA+AGG + chr1.2:83274093-83274112 None:intergenic 40.0%
AATCCAAGATGGAGAGACAT+AGG + chr1.2:83275001-83275020 None:intergenic 40.0%
ACGTAGGAATGAATCCAAGA+TGG + chr1.2:83275012-83275031 None:intergenic 40.0%
ACTTGTACTGCTAAACCTTC+GGG - chr1.2:83272934-83272953 MS.gene065032:intron 40.0%
AGCAATGTGTGGTACTACAA+CGG + chr1.2:83274698-83274717 None:intergenic 40.0%
ATATACATGCATGTACCCGA+AGG + chr1.2:83272952-83272971 None:intergenic 40.0%
ATCCAAGATGGAGAGACATA+GGG + chr1.2:83275000-83275019 None:intergenic 40.0%
ATGAGGGCAGGATTATATGA+TGG - chr1.2:83273176-83273195 MS.gene065032:intron 40.0%
ATGGTGAAACACCAGTAACT+TGG - chr1.2:83274125-83274144 MS.gene065032:CDS 40.0%
CAAGTGAACCTGAAATGGTA+TGG + chr1.2:83273491-83273510 None:intergenic 40.0%
CAGTATGGTTTGATGCCAAT+AGG - chr1.2:83275113-83275132 MS.gene065032:intron 40.0%
CTATTGGCATCAAACCATAC+TGG + chr1.2:83275115-83275134 None:intergenic 40.0%
GAAAATCCAATGTTTCGCGT+AGG - chr1.2:83274529-83274548 MS.gene065032:intron 40.0%
GACTTGTACTGCTAAACCTT+CGG - chr1.2:83272933-83272952 MS.gene065032:intron 40.0%
GATGAGCCTCCTTATAATAC+AGG - chr1.2:83275072-83275091 MS.gene065032:intron 40.0%
GCTTTCAGTAATATGGCTGT+TGG - chr1.2:83272714-83272733 MS.gene065032:intron 40.0%
GGTAGAGATCGAAGTATATC+AGG + chr1.2:83273971-83273990 None:intergenic 40.0%
GGTGCTTTCTTAAAGGCAAA+TGG - chr1.2:83274106-83274125 MS.gene065032:CDS 40.0%
GGTGGATATGCAAATGTTAG+TGG + chr1.2:83274856-83274875 None:intergenic 40.0%
GTTAGCACAAAATCAATGCC+TGG - chr1.2:83271934-83271953 MS.gene065032:intron 40.0%
GTTGAGATAGATAGATAGGG+GGG + chr1.2:83271618-83271637 None:intergenic 40.0%
TCTTGCCCTGTATTATAAGG+AGG + chr1.2:83275081-83275100 None:intergenic 40.0%
TGTGCTATACACTCTTCTGA+AGG - chr1.2:83273307-83273326 MS.gene065032:intron 40.0%
TGTTTATCGGGCAGATTTGT+TGG - chr1.2:83273351-83273370 MS.gene065032:intron 40.0%
TTGAATCAGTGAGTGAGTCA+AGG + chr1.2:83271861-83271880 None:intergenic 40.0%
TTTCATGCATGTGTTTGCAG+TGG - chr1.2:83274926-83274945 MS.gene065032:intron 40.0%
! CATGGAATGATGATGTGTAG+AGG + chr1.2:83271687-83271706 None:intergenic 40.0%
! CTAAAGTGTTTATCGAGGAG+AGG - chr1.2:83272530-83272549 MS.gene065032:intron 40.0%
! GACCTAGAGAACTTTCAAGT+AGG + chr1.2:83273608-83273627 None:intergenic 40.0%
!! AGGAACACCTACACTAGTTT+TGG + chr1.2:83271026-83271045 None:intergenic 40.0%
!! GGACAAACAGTTGGTGTTAT+CGG - chr1.2:83273387-83273406 MS.gene065032:intron 40.0%
!! GTCTGCTTTTGGATAACAAC+AGG - chr1.2:83274581-83274600 MS.gene065032:intron 40.0%
!! TGACTCACTCACTGATTCAA+TGG - chr1.2:83271861-83271880 MS.gene065032:intron 40.0%
!! TTCTGCTGTATCAGGTTGAA+GGG - chr1.2:83273934-83273953 MS.gene065032:CDS 40.0%
!! TTTCTGCTGTATCAGGTTGA+AGG - chr1.2:83273933-83273952 MS.gene065032:CDS 40.0%
AAGAAATGGCTCCACCCTAT+TGG + chr1.2:83275131-83275150 None:intergenic 45.0%
AAGACTCGCCAAGATGAAGA+AGG - chr1.2:83274341-83274360 MS.gene065032:intron 45.0%
AATCAATGCCTGGAACTCGT+TGG - chr1.2:83271944-83271963 MS.gene065032:intron 45.0%
AATCAGTGAGTGAGTCAAGG+TGG + chr1.2:83271858-83271877 None:intergenic 45.0%
AATCGTGTTGAGCCACACAT+CGG + chr1.2:83270591-83270610 None:intergenic 45.0%
ACACATTGCTTCTGCTTCCA+AGG - chr1.2:83274708-83274727 MS.gene065032:intron 45.0%
AGATTGATCCAACGAGTTCC+AGG + chr1.2:83271955-83271974 None:intergenic 45.0%
AGCTGCTAGAAGGATAGTTG+AGG - chr1.2:83273142-83273161 MS.gene065032:CDS 45.0%
ATAAAAGCAACTCTCGGGAG+AGG - chr1.2:83272598-83272617 MS.gene065032:intron 45.0%
ATCCCTATGTCTCTCCATCT+TGG - chr1.2:83274995-83275014 MS.gene065032:intron 45.0%
ATCCTTCCATTTGCAACGAG+AGG - chr1.2:83271565-83271584 MS.gene065032:intron 45.0%
ATGGTTTGATGCCAATAGGG+TGG - chr1.2:83275117-83275136 MS.gene065032:intron 45.0%
CACATGGTGTCTTGAAAAGG+TGG + chr1.2:83274621-83274640 None:intergenic 45.0%
GCAAGTCCAGGTTTCATGTA+GGG + chr1.2:83274661-83274680 None:intergenic 45.0%
GGTATGTGGCACCAATCATA+GGG - chr1.2:83270783-83270802 MS.gene065032:intron 45.0%
GTTAATGTGAGGAGGACATG+AGG + chr1.2:83271642-83271661 None:intergenic 45.0%
TAAAAGCAACTCTCGGGAGA+GGG - chr1.2:83272599-83272618 MS.gene065032:intron 45.0%
TAGTGTAGGTGTTCCTGCAT+GGG - chr1.2:83271030-83271049 MS.gene065032:intron 45.0%
TATCTATCTAGTGCCCATGC+AGG + chr1.2:83271046-83271065 None:intergenic 45.0%
TGAGGCAGATGAGTTCATGA+GGG - chr1.2:83273160-83273179 MS.gene065032:intron 45.0%
TGCAAGTCCAGGTTTCATGT+AGG + chr1.2:83274662-83274681 None:intergenic 45.0%
TGTACTTTCACCTGTTGAGC+CGG - chr1.2:83270733-83270752 MS.gene065032:intron 45.0%
TTCTTCAACTCTGCAAGTCC+AGG + chr1.2:83274673-83274692 None:intergenic 45.0%
TTGAGGCAGATGAGTTCATG+AGG - chr1.2:83273159-83273178 MS.gene065032:intron 45.0%
TTGCTCAAGGGACAAACAGT+TGG - chr1.2:83273378-83273397 MS.gene065032:intron 45.0%
TTGGAAGCAGAAGCAATGTG+TGG + chr1.2:83274709-83274728 None:intergenic 45.0%
TTTAGGCCTCTCGTTGCAAA+TGG + chr1.2:83271574-83271593 None:intergenic 45.0%
TTTGCAGCTGACTGAAGACT+GGG - chr1.2:83272650-83272669 MS.gene065032:CDS 45.0%
! CTATACACTCTTCTGAAGGC+TGG - chr1.2:83273311-83273330 MS.gene065032:intron 45.0%
! GTGTGATGGAGTTATTGGAC+AGG - chr1.2:83272171-83272190 MS.gene065032:intron 45.0%
! TTCTCTGCTTTGAGCAAAGC+AGG - chr1.2:83272684-83272703 MS.gene065032:CDS 45.0%
! TTTTGCAGCTGACTGAAGAC+TGG - chr1.2:83272649-83272668 MS.gene065032:CDS 45.0%
!! AGTGATTCGGTGTGAAACAG+TGG + chr1.2:83271780-83271799 None:intergenic 45.0%
!! TTTTTGGCACTTCAGCGTTG+CGG + chr1.2:83270644-83270663 None:intergenic 45.0%
!! TTATATATTTAAATTACTTA+TGG - chr1.2:83274386-83274405 MS.gene065032:intron 5.0%
AGACAAGTGAGACGAAGGTG+AGG + chr1.2:83270565-83270584 None:intergenic 50.0%
AGATCAAGGGCTACCCAGTA+TGG - chr1.2:83275098-83275117 MS.gene065032:intron 50.0%
CACTTACCACCTCGTCAACA+AGG - chr1.2:83274317-83274336 MS.gene065032:intron 50.0%
CACTTGTCTTCACCGATGTG+TGG - chr1.2:83270576-83270595 MS.gene065032:intron 50.0%
CGAGTCTTTCCTTGTTGACG+AGG + chr1.2:83274329-83274348 None:intergenic 50.0%
CGGTGTGAAAACAACCACTG+CGG + chr1.2:83270624-83270643 None:intergenic 50.0%
CGTAGGCCTTGATGTGTTTG+AGG - chr1.2:83274546-83274565 MS.gene065032:intron 50.0%
CTAGTGTAGGTGTTCCTGCA+TGG - chr1.2:83271029-83271048 MS.gene065032:intron 50.0%
CTTGTTGACGAGGTGGTAAG+TGG + chr1.2:83274319-83274338 None:intergenic 50.0%
GACAAGTGAGACGAAGGTGA+GGG + chr1.2:83270564-83270583 None:intergenic 50.0%
GAGGAAGAAGCGGTTGTTGA+TGG + chr1.2:83270528-83270547 None:intergenic 50.0%
GATGAGCCCTACATGAAACC+TGG - chr1.2:83274652-83274671 MS.gene065032:intron 50.0%
GGAAGGCTTGTCCAGTAACT+TGG + chr1.2:83273825-83273844 None:intergenic 50.0%
GGGAGTTCTCACAGAGACTA+CGG - chr1.2:83273091-83273110 MS.gene065032:CDS 50.0%
GGGCAGGATTATATGATGGC+TGG - chr1.2:83273180-83273199 MS.gene065032:intron 50.0%
GGGTATGTGGCACCAATCAT+AGG - chr1.2:83270782-83270801 MS.gene065032:intron 50.0%
GGTGAAGACAAGTGAGACGA+AGG + chr1.2:83270570-83270589 None:intergenic 50.0%
GTCTTTCCTTGTTGACGAGG+TGG + chr1.2:83274326-83274345 None:intergenic 50.0%
TCAAGGCCTACGCGAAACAT+TGG + chr1.2:83274538-83274557 None:intergenic 50.0%
TGACTTTGGCAGCTGCTAGA+AGG - chr1.2:83273132-83273151 MS.gene065032:CDS 50.0%
TGGCTCAACACGATTGTCGT+TGG - chr1.2:83270596-83270615 MS.gene065032:intron 50.0%
TTGCAGCTGACTGAAGACTG+GGG - chr1.2:83272651-83272670 MS.gene065032:CDS 50.0%
TTGGAAAAGGGCAGCATCCA+TGG - chr1.2:83274144-83274163 MS.gene065032:intron 50.0%
! AACCTACTAACCGGCTCAAC+AGG + chr1.2:83270746-83270765 None:intergenic 50.0%
! GCTGCCCTTTTCCAAGTTAC+TGG + chr1.2:83274139-83274158 None:intergenic 50.0%
! TCTGCTTTGAGCAAAGCAGG+AGG - chr1.2:83272687-83272706 MS.gene065032:CDS 50.0%
! TGTTTGCAGTGGACTCGTGA+GGG - chr1.2:83274937-83274956 MS.gene065032:intron 50.0%
!! ACAGTTGGTGTTATCGGAGC+TGG - chr1.2:83273393-83273412 MS.gene065032:intron 50.0%
!! GCTAGCAGCTCTAAATGTGC+TGG - chr1.2:83274969-83274988 MS.gene065032:intron 50.0%
!! GCTTGCAGCTTCACTGACTT+TGG - chr1.2:83273118-83273137 MS.gene065032:CDS 50.0%
AACAACCGCTTCTTCCTCGC+CGG - chr1.2:83270530-83270549 MS.gene065032:intron 55.0%
AAGTGAGACGAAGGTGAGGG+AGG + chr1.2:83270561-83270580 None:intergenic 55.0%
ACAATGCTTGGGCATGCAGC+TGG + chr1.2:83275172-83275191 None:intergenic 55.0%
AGTCCCAACCCATACCACTG+CGG + chr1.2:83274771-83274790 None:intergenic 55.0%
CACCTGTTGAGCCGGTTAGT+AGG - chr1.2:83270741-83270760 MS.gene065032:intron 55.0%
CATGGACGAGGTTCTCCAAG+AGG - chr1.2:83274162-83274181 MS.gene065032:intron 55.0%
CTCTTGGAGAACCTCGTCCA+TGG + chr1.2:83274164-83274183 None:intergenic 55.0%
GATTGTCGTTGGAACCGCAG+TGG - chr1.2:83270607-83270626 MS.gene065032:intron 55.0%
GCAGATGAGTTCATGAGGGC+AGG - chr1.2:83273164-83273183 MS.gene065032:intron 55.0%
GGCCTCTCGTTGCAAATGGA+AGG + chr1.2:83271570-83271589 None:intergenic 55.0%
GTTATCGGAGCTGGCCGTAT+TGG - chr1.2:83273402-83273421 MS.gene065032:intron 55.0%
TCATGTCCCCGCAGTGGTAT+GGG - chr1.2:83274760-83274779 MS.gene065032:intron 55.0%
TGTGGAGAAGTGGGTGTCCA+TGG + chr1.2:83271374-83271393 None:intergenic 55.0%
TTCATGTCCCCGCAGTGGTA+TGG - chr1.2:83274759-83274778 MS.gene065032:intron 55.0%
! AGCGGTTGTTGATGGAGCAG+CGG + chr1.2:83270520-83270539 None:intergenic 55.0%
! AGGGGTCGGTGTTTGAACCA+TGG - chr1.2:83271354-83271373 MS.gene065032:intron 55.0%
! GTCTTTTCATGTCCCCGCAG+TGG - chr1.2:83274754-83274773 MS.gene065032:intron 55.0%
! GTGTTTGCAGTGGACTCGTG+AGG - chr1.2:83274936-83274955 MS.gene065032:intron 55.0%
AAGGGCAGCATCCATGGACG+AGG - chr1.2:83274150-83274169 MS.gene065032:intron 60.0%
AGAGTCCGGCGAGGAAGAAG+CGG + chr1.2:83270538-83270557 None:intergenic 60.0%
ATGCTTGGGCATGCAGCTGG+AGG + chr1.2:83275169-83275188 None:intergenic 60.0%
GAAGGTGAGGGAGGAGAGTC+CGG + chr1.2:83270552-83270571 None:intergenic 60.0%
GCAGCGGAGGACAAAGACGA+CGG + chr1.2:83270504-83270523 None:intergenic 60.0%
GTCCCAACCCATACCACTGC+GGG + chr1.2:83274770-83274789 None:intergenic 60.0%
TCCCAACCCATACCACTGCG+GGG + chr1.2:83274769-83274788 None:intergenic 60.0%
TCCCCGCAGTGGTATGGGTT+GGG - chr1.2:83274765-83274784 MS.gene065032:intron 60.0%
! GCAGTGGACTCGTGAGGGAA+TGG - chr1.2:83274942-83274961 MS.gene065032:intron 60.0%
! GGTTGTTGATGGAGCAGCGG+AGG + chr1.2:83270517-83270536 None:intergenic 60.0%
GTCCCCGCAGTGGTATGGGT+TGG - chr1.2:83274764-83274783 MS.gene065032:intron 65.0%
TATCCAGTGCTCGCGCCGCA+GGG + chr1.2:83271140-83271159 None:intergenic 65.0%
! GTGTTGGTGTCCCTGCCCTG+CGG - chr1.2:83271122-83271141 MS.gene065032:CDS 65.0%
GTATCCAGTGCTCGCGCCGC+AGG + chr1.2:83271141-83271160 None:intergenic 70.0%
TGAGGGAGGAGAGTCCGGCG+AGG + chr1.2:83270547-83270566 None:intergenic 70.0%
AGTGCTCGCGCCGCAGGGCA+GGG + chr1.2:83271135-83271154 None:intergenic 75.0%
! CAGTGCTCGCGCCGCAGGGC+AGG + chr1.2:83271136-83271155 None:intergenic 80.0%
! CTGCCCTGCGGCGCGAGCAC+TGG - chr1.2:83271134-83271153 MS.gene065032:CDS 80.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 83270492 83275332 83270492 ID=MS.gene065032
chr1.2 mRNA 83270492 83275332 83270492 ID=MS.gene065032.t1;Parent=MS.gene065032
chr1.2 exon 83275161 83275332 83275161 ID=MS.gene065032.t1.exon1;Parent=MS.gene065032.t1
chr1.2 CDS 83275161 83275332 83275161 ID=cds.MS.gene065032.t1;Parent=MS.gene065032.t1
chr1.2 exon 83273822 83274150 83273822 ID=MS.gene065032.t1.exon2;Parent=MS.gene065032.t1
chr1.2 CDS 83273822 83274150 83273822 ID=cds.MS.gene065032.t1;Parent=MS.gene065032.t1
chr1.2 exon 83273632 83273715 83273632 ID=MS.gene065032.t1.exon3;Parent=MS.gene065032.t1
chr1.2 CDS 83273632 83273715 83273632 ID=cds.MS.gene065032.t1;Parent=MS.gene065032.t1
chr1.2 exon 83273027 83273167 83273027 ID=MS.gene065032.t1.exon4;Parent=MS.gene065032.t1
chr1.2 CDS 83273027 83273167 83273027 ID=cds.MS.gene065032.t1;Parent=MS.gene065032.t1
chr1.2 exon 83272611 83272732 83272611 ID=MS.gene065032.t1.exon5;Parent=MS.gene065032.t1
chr1.2 CDS 83272611 83272732 83272611 ID=cds.MS.gene065032.t1;Parent=MS.gene065032.t1
chr1.2 exon 83272378 83272459 83272378 ID=MS.gene065032.t1.exon6;Parent=MS.gene065032.t1
chr1.2 CDS 83272378 83272459 83272378 ID=cds.MS.gene065032.t1;Parent=MS.gene065032.t1
chr1.2 exon 83271804 83271876 83271804 ID=MS.gene065032.t1.exon7;Parent=MS.gene065032.t1
chr1.2 CDS 83271804 83271876 83271804 ID=cds.MS.gene065032.t1;Parent=MS.gene065032.t1
chr1.2 exon 83271632 83271723 83271632 ID=MS.gene065032.t1.exon8;Parent=MS.gene065032.t1
chr1.2 CDS 83271632 83271723 83271632 ID=cds.MS.gene065032.t1;Parent=MS.gene065032.t1
chr1.2 exon 83271462 83271536 83271462 ID=MS.gene065032.t1.exon9;Parent=MS.gene065032.t1
chr1.2 CDS 83271462 83271536 83271462 ID=cds.MS.gene065032.t1;Parent=MS.gene065032.t1
chr1.2 exon 83271257 83271364 83271257 ID=MS.gene065032.t1.exon10;Parent=MS.gene065032.t1
chr1.2 CDS 83271257 83271364 83271257 ID=cds.MS.gene065032.t1;Parent=MS.gene065032.t1
chr1.2 exon 83271095 83271172 83271095 ID=MS.gene065032.t1.exon11;Parent=MS.gene065032.t1
chr1.2 CDS 83271095 83271172 83271095 ID=cds.MS.gene065032.t1;Parent=MS.gene065032.t1
chr1.2 exon 83270834 83270878 83270834 ID=MS.gene065032.t1.exon12;Parent=MS.gene065032.t1
chr1.2 CDS 83270834 83270878 83270834 ID=cds.MS.gene065032.t1;Parent=MS.gene065032.t1
chr1.2 exon 83270616 83270730 83270616 ID=MS.gene065032.t1.exon13;Parent=MS.gene065032.t1
chr1.2 CDS 83270616 83270730 83270616 ID=cds.MS.gene065032.t1;Parent=MS.gene065032.t1
chr1.2 exon 83270492 83270514 83270492 ID=MS.gene065032.t1.exon14;Parent=MS.gene065032.t1
chr1.2 CDS 83270492 83270514 83270492 ID=cds.MS.gene065032.t1;Parent=MS.gene065032.t1
Gene Sequence

>MS.gene065032

ATGGCAGCTCCGTCGTCTTTGTCCTCCGCTGCTCCATCAACAACCGCTTCTTCCTCGCCGGACTCTCCTCCCTCACCTTCGTCTCACTTGTCTTCACCGATGTGTGGCTCAACACGATTGTCGTTGGAACCGCAGTGGTTGTTTTCACACCGCAACGCTGAAGTGCCAAAAAGTACAGAATAAAAAAAAATGTTTTGTAAAAAAAAAATTGTACTTTCACCTTTCTTTTTTGAGGGAAAATTGTACTTTCACCTGTTGAGCCGGTTAGTAGGTTAGTAATTAAAATAGAAGGGTATGTGGCACCAATCATAGGGAGAGTATTTAAGAGAGAGTGTATGAGCAACTGTCTCTAGCATTTCTCAAAATAAAATTATATATCTGAAGCTTGAAAATCCACATAGTAAATTTGCATTTTTTTAGACGGTTAAATCAATTCATTGCAATTAATCTCTTGACATAATTGGCATATTCAATAGTTTTTCTTTTTCTAAGAGGATATTGAAAACGTTATATTTGATAATTGAATTTATGCCAAAACTAGTGTAGGTGTTCCTGCATGGGCACTAGATAGATATTTCGATTGAGCTACAACTTTTAACAGTTTCTTCAAATATAAACATGTCAAAATTAGTGTTGGTGTCCCTGCCCTGCGGCGCGAGCACTGGATACATGTTTCGATTGAGCTACAACTTTTAAAACAATTTCTTCAAATATAAATAGATTTTGGAATTATGAATGACATAGTTAGTCATAAATTAAATTTAGATGCACCAAAGATGATAGAACTTTTTTTTTTATTTGACTTAGTTGGTTGATAAATTATATGTGAAGTTAGCTGGTAGGGATATTGCATTTTATATTCAGGGGTCGGTGTTTGAACCATGGACACCCACTTCTCCACAATTAAATTGTGTGAGCCAAAAAAAAAAATTTATATGTGAATTTTATTATTATTTTTCTTTTTTATTTTAATTTTTTACTTTATAGAAAAAATGCATAAATTTTATTGTAATTTTAACTATAAATCGAATTTATTGTGTTGGGAGAAATAGGATAAATATAAAATGGATGTTATCCTTCCATTTGCAACGAGAGGCCTAAACGTTACATCAACTCATCTCTTCCCCCCTATCTATCTATCTCAACACCTCATGTCCTCCTCACATTAACTTCAAATAAAAGGATCCAAAATCCTCTACACATCATCATTCCATGATCAAGCAACCAAAAAGTCAAAGTCTTCTAAATTCATCCATTTCATTGGTCAGAAACATATTAATAGTATCCACTGTTTCACACCGAATCACTCAATCACTACTACTATAAGCAGCAGAGCAAGCCGTTACGAAAAGTTCGTTCATCACCACCTTGACTCACTCACTGATTCAATGGCGAAACCAGTTTCAATTCAAGTATGGAACCCAAATGGAAAATACAGAGTCGTTAGCACAAAATCAATGCCTGGAACTCGTTGGATCAATCTTCTCATTCAACAAGATTGTCGTCTTGAAGTAATCAACTCACTCTGTTTTTTTTTTTTTCGTTTTTCTTTTGCTTCATTCTTTGTTGAGTCAATCAATGGTTTCTAAGCATTGAATGTGTTTTTATTGAATTCAGATATGTACGGAGAAGAAAACAATTCTGTCAGTTGAAGATATCATTGCTTTGATTGGTGATAAGTGTGATGGAGTTATTGGACAGGTAATCATCATAGCGTCAATTACATACAAGATTTTCATGTTTATGTTCATCATCAAATTCATAAATGATCGAATCGAAATTCATGTTATTATTTTTATTTTTAAATTATAGGTTTTTTTGGTTGTATGTGGTTTTTTTTACTTCTGGGGTTAGTTTATGATTTAAGAACATAAAATTCAATTCTAAATAGCTATTTTTTATTGGTTTTAGTAATTTTGTTCAAATATTTATTTTGTCTTGTATTGCTTCATAGTTTATAACACGATTTAAATTGTATGTTAATGATATTGTGAATCAAGAATAGAGGGGGAAAAAAGTTTGAATATATTCAAATGTACTAAAGTGTTTATCGAGGAGAGGAGTTTAAATTTTAACATAAGAGGATAGAGCAGTGTAAGTTTTAACATAAAAGCAACTCTCGGGAGAGGGAAGTGTAATTTACTTAAATTTATTTACTTTTGCAGCTGACTGAAGACTGGGGAGAAGAGTTGTTCTCTGCTTTGAGCAAAGCAGGAGGCAAAGCTTTCAGTAATATGGCTGTTGGTTATAATAATGTTGATGTCAATGCTGCAAACAAATATGGTGTTGCTGTTGGAAATACTCCTGTAAGCTTTCTCTTTCATTCCTGTATCATTTTGACACTAACACTGTTATATTTACATTTTAAATGTATGTGGTTAGTTAGTCTTTTTTCGTAAGTTTCAAAGTTATCATGTATGCTTGGATGAGGGATTTCTTTAGACTTGTACTGCTAAACCTTCGGGTACATGCATGTATATGTGATGCTGAATCGGTTGTAATTATGGTGTTTGTGAGTGTTTATGAGAAATAGTGATTAGTCTTGATGAGGAAGTTATTTGTTATAACCTTGGTTTCATATCATTCATTGTGTTTGGTAGGGAGTTCTCACAGAGACTACGGCAGAGCTTGCAGCTTCACTGACTTTGGCAGCTGCTAGAAGGATAGTTGAGGCAGATGAGTTCATGAGGGCAGGATTATATGATGGCTGGCTACCTCATCTGTATGAAAAATAAACCTTTCTTGTTTTACTTAAGATTTTTGTTAAATATTGTGCAAGTTCTTCTTCGTTAGTCTTCAAATTTTGAATTCTGAGTGTGCTATACACTCTTCTGAAGGCTGGAATAACAGTTTTGATTTTGTTTATCGGGCAGATTTGTTGGAAACTTGCTCAAGGGACAAACAGTTGGTGTTATCGGAGCTGGCCGTATTGGATCAGCTTATGCAAGAATGATGGTAATTTTCCCATACATTTCAGATTTGCATTGAATGTCTATCCATACCATTTCAGGTTCACTTGATTGAGTTTATTTTGTTATATGCTAAAATAGTTGCTAATAAAAATTACTTGGTTTTTGAGTACTGACTTGGCATAAAATTAAAACGGTCAGCATCCTACTTGAAAGTTCTCTAGGTCACATAATATCTAGGACAAGTTCAAATACATATAATCTTTATTTGACTCTTTCTTTCAGTAGTGTCAAATTTTGAAAGAACATTCATTCTGTAATGCATTAAGCTAGTTATAACTTCTGTCAATAAAAAAAAGAGAAGCTAGTGGTAACTTATGATATTTGATTTTGTTCATATTGTCACGATATTCAAATTTGGCCAAGTTACTGGACAAGCCTTCCAAAAATCTGTTAACTTAGAATTTTGCAAGAATGTGCATTCTTTAGTTTACAGATGTTAATGACGCTAAGTTGACTATGATGTGATTCTTTTCTGCTGTATCAGGTTGAAGGGTTCAAGATGAACCTGATATACTTCGATCTCTACCAATCTACAAGACTAGAAAAGTTTGTCACAGGCATGTCCCTATGATTTGTTTAAATGGATATTTGTTGACTTCAAAGAAAATTGACTAATTATTATTTTTCCTTATTGCAGCATATGGTGCTTTCTTAAAGGCAAATGGTGAAACACCAGTAACTTGGAAAAGGGCAGCATCCATGGACGAGGTTCTCCAAGAGGCAGATATAGTAAGAATCTGACACTACGAGTTAAACTTTGTAGCTGTAAACATATCACATTTGATCATTCCTAATAATTTAGTTTATGATGAGTGCTTTTGTAGATTAGTCTTCATCCTATCTTGGATAAAACCACTTACCACCTCGTCAACAAGGAAAGACTCGCCAAGATGAAGAAGGTTAGAGTTCAAGGGACTTTTTTTTATATATTTAAATTACTTATGGCATCACGTGGTGCAAATTCTCTCTGTTACTAATGATATATTCTTATCGCAGGAAGCAATTCTTATAAACTGCAGTAGAGGACCTGTTATTGATGAAGTTGCACTTGTGGAGCATTTAAAAGAAAATCCAATGTTTCGCGTAGGCCTTGATGTGTTTGAGGTAATTGAACCTTGTCTGCTTTTGGATAACAACAGGATTTGTCTTTATAACCACCTTTTCAAGACACCATGTGATTTTTATTAGGATGAGCCCTACATGAAACCTGGACTTGCAGAGTTGAAGAATGCCGTTGTAGTACCACACATTGCTTCTGCTTCCAAGGTAATCAATTTTAGTTATAGAAGAGTCTTTTCATGTCCCCGCAGTGGTATGGGTTGGGACTTAGAATTAAGTACAGGATTCGATCTCTACTGATTACAAATCCCCTTCTCCTTAGTAAACTAACCACTAACATTTGCATATCCACCTAAAAAAAGATTCTTTTCACAGCTGACTCACTTTCAAAAGTAATCAATTGTTTCATGCATGTGTTTGCAGTGGACTCGTGAGGGAATGGCAACGCTAGCAGCTCTAAATGTGCTGGTATATCCCTATGTCTCTCCATCTTGGATTCATTCCTACGTTTGATCAATGTAAATTATACATGTCCTATTTTGTAAAACTGATGAGCCTCCTTATAATACAGGGCAAGATCAAGGGCTACCCAGTATGGTTTGATGCCAATAGGGTGGAGCCATTTCTTGATGAAAATGCTCAACCTCCAGCTGCATGCCCAAGCATTGTTAATGCAAAAGCCCTGAGTAATAACATTTTTCACCCTTTCACTTGGGCCAAATATTATTGGAAATAAAACTTTTTTAAGTATTAACATTGAACTTGTATATTTTATTTCTAATCGCAGGTTTACCAGTTTCAAAGCTGTAG

Protein sequence

>MS.gene065032.t1

MAAPSSLSSAAPSTTASSSPDSPPSPSSHLSSPMCGSTRLSLEPQWLFSHRNAEVPKRSKILYTSSFHDQATKKSKSSKFIHFIGQKHINSIHCFTPNHSITTTISSRASRYEKFVHHHLDSLTDSMAKPVSIQVWNPNGKYRVVSTKSMPGTRWINLLIQQDCRLEICTEKKTILSVEDIIALIGDKCDGVIGQLTEDWGEELFSALSKAGGKAFSNMAVGYNNVDVNAANKYGVAVGNTPGVLTETTAELAASLTLAAARRIVEADEFMRAGLYDGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQSTRLEKFVTAYGAFLKANGETPVTWKRAASMDEVLQEADIISLHPILDKTTYHLVNKERLAKMKKEAILINCSRGPVIDEVALVEHLKENPMFRVGLDVFEDEPYMKPGLAELKNAVVVPHIASASKWTREGMATLAALNVLGKIKGYPVWFDANRVEPFLDENAQPPAACPSIVNAKALSLPVSKL