Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39423.t1 | XP_013457081.1 | 95 | 478 | 21 | 2 | 1 | 477 | 1 | 476 | 3.70E-259 | 903.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39423.t1 | Q94BX4 | 79.6 | 437 | 84 | 1 | 7 | 443 | 3 | 434 | 1.8e-201 | 703.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39423.t1 | A0A072UN35 | 95.0 | 478 | 21 | 2 | 1 | 477 | 1 | 476 | 2.7e-259 | 903.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene39423 | 0.801748 | 7.78E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene39423 | 0.800544 | 1.37E-48 | -1.69E-46 |
| MS.gene053166 | MS.gene39423 | 0.805721 | 1.16E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene39423 | 0.820296 | 7.39E-53 | -1.69E-46 |
| MS.gene054559 | MS.gene39423 | 0.807946 | 3.94E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene39423 | 0.801844 | 7.43E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene39423 | 0.82058 | 6.36E-53 | -1.69E-46 |
| MS.gene057444 | MS.gene39423 | 0.801929 | 7.14E-49 | -1.69E-46 |
| MS.gene058037 | MS.gene39423 | 0.802619 | 5.15E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene39423 | 0.813229 | 2.84E-51 | -1.69E-46 |
| MS.gene059272 | MS.gene39423 | 0.806747 | 7.08E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene39423 | MS.gene77885 | PPI |
| MS.gene39423 | MS.gene91851 | PPI |
| MS.gene39423 | MS.gene81663 | PPI |
| MS.gene39423 | MS.gene29768 | PPI |
| MS.gene81658 | MS.gene39423 | PPI |
| MS.gene39423 | MS.gene90626 | PPI |
| MS.gene39423 | MS.gene81660 | PPI |
| MS.gene39423 | MS.gene92674 | PPI |
| MS.gene39423 | MS.gene46611 | PPI |
| MS.gene39423 | MS.gene98540 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39423.t1 | MTR_4g089065 | 94.979 | 478 | 21 | 2 | 1 | 477 | 1 | 476 | 0.0 | 935 |
| MS.gene39423.t1 | MTR_2g095220 | 82.898 | 421 | 69 | 1 | 6 | 426 | 4 | 421 | 0.0 | 722 |
| MS.gene39423.t1 | MTR_2g095220 | 83.673 | 392 | 61 | 1 | 6 | 397 | 4 | 392 | 0.0 | 672 |
| MS.gene39423.t1 | MTR_2g095220 | 83.019 | 318 | 51 | 1 | 6 | 323 | 4 | 318 | 0.0 | 540 |
| MS.gene39423.t1 | MTR_2g047140 | 90.000 | 70 | 7 | 0 | 44 | 113 | 140 | 209 | 8.40e-36 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39423.t1 | AT3G45100 | 79.365 | 441 | 85 | 2 | 7 | 447 | 3 | 437 | 0.0 | 706 |
| MS.gene39423.t1 | AT3G45100 | 79.365 | 441 | 85 | 2 | 7 | 447 | 3 | 437 | 0.0 | 706 |
| MS.gene39423.t1 | AT3G45100 | 79.365 | 441 | 85 | 2 | 7 | 447 | 3 | 437 | 0.0 | 706 |
| MS.gene39423.t1 | AT1G73160 | 26.171 | 363 | 214 | 13 | 25 | 353 | 98 | 440 | 4.65e-16 | 80.9 |
Find 99 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAGAATAGTTCTTATAAT+TGG | 0.157108 | 4.2:+21905378 | None:intergenic |
| GTCAGGGATGTTCTAATAAA+AGG | 0.160117 | 4.2:-21904287 | MS.gene39423:CDS |
| TTGAAGGTTCATTTCAAAAT+TGG | 0.181993 | 4.2:-21904407 | MS.gene39423:intron |
| ATATACAATTTCGGTTCTTT+TGG | 0.277334 | 4.2:+21902822 | None:intergenic |
| GCAGCATAGTTATCGCCTTC+TGG | 0.281379 | 4.2:+21902991 | None:intergenic |
| AATACATTTCCAACTTTGTA+TGG | 0.302143 | 4.2:-21905408 | MS.gene39423:CDS |
| GGATGCAATCGACACACTTC+TGG | 0.311306 | 4.2:+21904949 | None:intergenic |
| CAAGCAAGTCGGCTCCTTTA+CGG | 0.323790 | 4.2:+21904983 | None:intergenic |
| TAGTAATAATAATATTTCAT+AGG | 0.349953 | 4.2:-21902116 | None:intergenic |
| AGCACGATCATATACAATTT+CGG | 0.367421 | 4.2:+21902813 | None:intergenic |
| ACAACTAGCAGCCTCTAATA+TGG | 0.367430 | 4.2:+21903280 | None:intergenic |
| TCCTCCTCCGCCTCCGACAC+TGG | 0.377268 | 4.2:+21905060 | None:intergenic |
| TTGGCAGTGTCAACAGCATT+AGG | 0.387563 | 4.2:+21905090 | None:intergenic |
| CTGCCCATGCTCCGCAAGAT+AGG | 0.392858 | 4.2:+21902426 | None:intergenic |
| GCCAGTGTCGGAGGCGGAGG+AGG | 0.397548 | 4.2:-21905061 | MS.gene39423:CDS |
| TCCTCCAACCGTACACGTTT+AGG | 0.399496 | 4.2:+21904374 | None:intergenic |
| CAAGATCGAGTTGAATTGTT+GGG | 0.408343 | 4.2:-21904329 | MS.gene39423:CDS |
| CATTTCAAAATTGGAGGTGA+TGG | 0.412316 | 4.2:-21904398 | MS.gene39423:CDS |
| TGAGAATAGTTCTTATAATT+GGG | 0.413206 | 4.2:+21905379 | None:intergenic |
| ACCAGATGATATGATTGTTT+TGG | 0.414859 | 4.2:-21903048 | MS.gene39423:CDS |
| TTTACCGATCATTCCTTGAA+TGG | 0.426745 | 4.2:-21905258 | MS.gene39423:CDS |
| CCATGATTCTAGCATGCATA+AGG | 0.430190 | 4.2:+21905295 | None:intergenic |
| CATGCTTATGGAAAACGCTC+TGG | 0.432407 | 4.2:-21905495 | MS.gene39423:CDS |
| GACACCTATCTTGCGGAGCA+TGG | 0.435167 | 4.2:-21902430 | MS.gene39423:CDS |
| AACCTTCTCCGGCACCAAAC+CGG | 0.438061 | 4.2:+21905122 | None:intergenic |
| CCCTCCAATCCATCACGGTT+GGG | 0.442720 | 4.2:+21902208 | None:intergenic |
| AGCATCACTAAAACCATTCA+AGG | 0.443771 | 4.2:+21905245 | None:intergenic |
| TTTGAGGTCCGGTTTGGTGC+CGG | 0.447444 | 4.2:-21905130 | MS.gene39423:CDS |
| TAAGCCAGTGTCGGAGGCGG+AGG | 0.447760 | 4.2:-21905064 | MS.gene39423:CDS |
| TACCTTGGCAGATGTGAGTC+AGG | 0.451847 | 4.2:-21905190 | MS.gene39423:CDS |
| CTCACCCAACCGTGATGGAT+TGG | 0.454616 | 4.2:-21902212 | MS.gene39423:CDS |
| AGTAATAATAATATTTCATA+GGG | 0.455873 | 4.2:-21902115 | None:intergenic |
| CTCATGACAAAGTGTTGAAA+AGG | 0.457480 | 4.2:+21905320 | None:intergenic |
| GCCAAAACAATCATATCATC+TGG | 0.465468 | 4.2:+21903047 | None:intergenic |
| AAGGTTCATTTCAAAATTGG+AGG | 0.466292 | 4.2:-21904404 | MS.gene39423:CDS |
| GTCCGGTTTGGTGCCGGAGA+AGG | 0.467304 | 4.2:-21905124 | MS.gene39423:CDS |
| TAAAAGTCTATTATGTTCCA+TGG | 0.467754 | 4.2:-21905449 | MS.gene39423:CDS |
| CCTTATGCATGCTAGAATCA+TGG | 0.471659 | 4.2:-21905295 | MS.gene39423:CDS |
| CTCCGACACTGGCTTAAACT+TGG | 0.473175 | 4.2:+21905071 | None:intergenic |
| TCAGGGATGTTCTAATAAAA+GGG | 0.473990 | 4.2:-21904286 | MS.gene39423:CDS |
| TTCTCGACACCACCAACGTT+GGG | 0.478477 | 4.2:+21905932 | None:intergenic |
| TATTGTTGTTATCAGTCGAT+TGG | 0.479011 | 4.2:-21905010 | MS.gene39423:CDS |
| TCAAGATCGAGTTGAATTGT+TGG | 0.479377 | 4.2:-21904330 | MS.gene39423:CDS |
| TTGGGTGAGAGAATGAAATC+TGG | 0.480252 | 4.2:+21902226 | None:intergenic |
| ATGCTTATGGAAAACGCTCT+GGG | 0.482017 | 4.2:-21905494 | MS.gene39423:CDS |
| AGAACCTGATCCAAGTGATA+TGG | 0.488416 | 4.2:-21903024 | MS.gene39423:CDS |
| GTGGTTGTAACTCATGCTTA+TGG | 0.491032 | 4.2:-21905507 | MS.gene39423:CDS |
| CTGTACAACATACAAAAGTC+AGG | 0.491035 | 4.2:-21904304 | MS.gene39423:CDS |
| AGTCGATTGGTTTACCGTAA+AGG | 0.496026 | 4.2:-21904997 | MS.gene39423:CDS |
| CTATCTTGCGGAGCATGGGC+AGG | 0.506894 | 4.2:-21902425 | MS.gene39423:CDS |
| TCCCTCCAATCCATCACGGT+TGG | 0.509799 | 4.2:+21902207 | None:intergenic |
| CGCACCATATCACTTGGATC+AGG | 0.514256 | 4.2:+21903020 | None:intergenic |
| ATGTGTTTCTCATACAAGTA+AGG | 0.514270 | 4.2:-21905163 | MS.gene39423:CDS |
| TGCTAGAATCATGGGATACA+AGG | 0.515986 | 4.2:-21905286 | MS.gene39423:CDS |
| TATGGCATATATTGGAGCTA+TGG | 0.517504 | 4.2:-21902364 | MS.gene39423:CDS |
| ATATTAGAGGCTGCTAGTTG+TGG | 0.519552 | 4.2:-21903278 | MS.gene39423:CDS |
| AATGTATTCTGATTAAAGAA+TGG | 0.519683 | 4.2:+21905423 | None:intergenic |
| GGGAGTGTTCCATACAAAGT+TGG | 0.520624 | 4.2:+21905399 | None:intergenic |
| ACACCTATCTTGCGGAGCAT+GGG | 0.530106 | 4.2:-21902429 | MS.gene39423:CDS |
| CATGATTCTAGCATGCATAA+GGG | 0.530621 | 4.2:+21905296 | None:intergenic |
| TCTCAATGCTTGCTCAACTT+AGG | 0.540963 | 4.2:-21905893 | MS.gene39423:CDS |
| CTTATGCATGCTAGAATCAT+GGG | 0.543612 | 4.2:-21905294 | MS.gene39423:CDS |
| GCCTCCTCGATATCATCAGC+AGG | 0.544725 | 4.2:+21902250 | None:intergenic |
| ATTCTCTCACCCAACCGTGA+TGG | 0.545289 | 4.2:-21902217 | MS.gene39423:CDS |
| GCATATATTGGAGCTATGGC+AGG | 0.547082 | 4.2:-21902360 | MS.gene39423:intron |
| ACCCAACCGTGATGGATTGG+AGG | 0.551341 | 4.2:-21902209 | MS.gene39423:CDS |
| ACCTAAACGTGTACGGTTGG+AGG | 0.551551 | 4.2:-21904375 | MS.gene39423:CDS |
| TGATTAAAGAATGGTCTCCA+TGG | 0.563439 | 4.2:+21905432 | None:intergenic |
| GAAAGAATTACCGTTGTGCA+TGG | 0.568216 | 4.2:-21905351 | MS.gene39423:CDS |
| CCCAACCGTGATGGATTGGA+GGG | 0.579267 | 4.2:-21902208 | MS.gene39423:CDS |
| AAAACCATTCAAGGAATGAT+CGG | 0.584527 | 4.2:+21905254 | None:intergenic |
| AGATGAGGGAACTCTATAGC+TGG | 0.592152 | 4.2:-21902855 | MS.gene39423:CDS |
| ATTGCGCGCACCATATCACT+TGG | 0.596121 | 4.2:+21903014 | None:intergenic |
| GTTTAAGCCAGTGTCGGAGG+CGG | 0.597549 | 4.2:-21905067 | MS.gene39423:CDS |
| GGGGTTAGATACATGACTGG+TGG | 0.601958 | 4.2:-21905474 | MS.gene39423:CDS |
| TGGACCTAAACGTGTACGGT+TGG | 0.605008 | 4.2:-21904378 | MS.gene39423:CDS |
| CTTGCTCAACTTAGGCCACA+AGG | 0.612330 | 4.2:-21905885 | MS.gene39423:intron |
| TATGGTGCGCGCAATCCAGA+AGG | 0.612446 | 4.2:-21903006 | MS.gene39423:CDS |
| GTGATGGACCTAAACGTGTA+CGG | 0.614142 | 4.2:-21904382 | MS.gene39423:CDS |
| ACAGTCAGCACGCGCGTCGG+AGG | 0.619748 | 4.2:-21903248 | MS.gene39423:CDS |
| GCGCGTCGGAGGTGTTCCTG+AGG | 0.622073 | 4.2:-21903237 | MS.gene39423:intron |
| ATCTACTTGAACGACTCTCA+CGG | 0.623084 | 4.2:-21902771 | MS.gene39423:intron |
| CAAGTTTAAGCCAGTGTCGG+AGG | 0.630344 | 4.2:-21905070 | MS.gene39423:CDS |
| TGCCAAGTTTAAGCCAGTGT+CGG | 0.634420 | 4.2:-21905073 | MS.gene39423:CDS |
| AGCCTGACTCACATCTGCCA+AGG | 0.635692 | 4.2:+21905188 | None:intergenic |
| ATTCTCGACACCACCAACGT+TGG | 0.636477 | 4.2:+21905931 | None:intergenic |
| TGGAAGTATTCACATGAACA+AGG | 0.644287 | 4.2:-21905223 | MS.gene39423:CDS |
| TGTACAACATACAAAAGTCA+GGG | 0.653566 | 4.2:-21904303 | MS.gene39423:CDS |
| TCTGGGGTTAGATACATGAC+TGG | 0.653921 | 4.2:-21905477 | MS.gene39423:CDS |
| TCATACAAGTAAGGAGAACA+CGG | 0.658070 | 4.2:-21905154 | MS.gene39423:CDS |
| AGTTGAGCAAGCATTGAGAG+AGG | 0.659450 | 4.2:+21905897 | None:intergenic |
| TGCTTATGGAAAACGCTCTG+GGG | 0.662549 | 4.2:-21905493 | MS.gene39423:CDS |
| AACATCCCTCCAATCCATCA+CGG | 0.663128 | 4.2:+21902203 | None:intergenic |
| GAGGAGGAGCGTCCTCCTAG+CGG | 0.667739 | 4.2:-21905045 | MS.gene39423:CDS |
| TTAGCCTGCTGATGATATCG+AGG | 0.670719 | 4.2:-21902254 | MS.gene39423:intron |
| AATGACTTCAACAAGCAAGT+CGG | 0.671637 | 4.2:+21904972 | None:intergenic |
| TTAACAGTCAGCACGCGCGT+CGG | 0.691141 | 4.2:-21903251 | MS.gene39423:CDS |
| GCCTGCTGATGATATCGAGG+AGG | 0.693141 | 4.2:-21902251 | MS.gene39423:CDS |
| GGTTTGATGTCCATGCACAA+CGG | 0.712542 | 4.2:+21905341 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATTCTTATGATAAAT+TGG | + | chr4.2:21902423-21902442 | None:intergenic | 10.0% |
| !!! | GATATTATTTATTTTGTATT+TGG | - | chr4.2:21904754-21904773 | MS.gene39423:intron | 10.0% |
| !! | AGGTTTAATATAATTCTAAT+AGG | - | chr4.2:21905377-21905396 | MS.gene39423:CDS | 15.0% |
| !! | ATAAACATTTATCATATAAG+TGG | + | chr4.2:21902328-21902347 | None:intergenic | 15.0% |
| !! | CACAATATTTATATGATTAT+TGG | - | chr4.2:21903544-21903563 | MS.gene39423:intron | 15.0% |
| !! | TCTAAAAACTACAATTTATT+TGG | + | chr4.2:21903636-21903655 | None:intergenic | 15.0% |
| !! | TGTGAAAATGAATATTAAAA+GGG | + | chr4.2:21903528-21903547 | None:intergenic | 15.0% |
| !! | TTGTGAAAATGAATATTAAA+AGG | + | chr4.2:21903529-21903548 | None:intergenic | 15.0% |
| !!! | TTATTGATTTGAAGATATTA+AGG | - | chr4.2:21904701-21904720 | MS.gene39423:intron | 15.0% |
| !! | AACTAATACCTAATGAATTA+AGG | - | chr4.2:21905602-21905621 | MS.gene39423:intron | 20.0% |
| !! | AAGAATAGAAAAAATACTTG+TGG | + | chr4.2:21904907-21904926 | None:intergenic | 20.0% |
| !! | AAGAATTATATCTCTTGAAA+AGG | - | chr4.2:21902432-21902451 | MS.gene39423:CDS | 20.0% |
| !! | AATAGAATCAAGTGAAATAA+TGG | - | chr4.2:21903610-21903629 | MS.gene39423:intron | 20.0% |
| !! | AATGTATTCTGATTAAAGAA+TGG | + | chr4.2:21902692-21902711 | None:intergenic | 20.0% |
| !! | AGTGAAAATTGAAATACTTA+TGG | + | chr4.2:21904453-21904472 | None:intergenic | 20.0% |
| !! | ATTATATAAGGTGAAATAAG+TGG | + | chr4.2:21902298-21902317 | None:intergenic | 20.0% |
| !! | TCAAAGATAAACTACATAAA+AGG | + | chr4.2:21904946-21904965 | None:intergenic | 20.0% |
| !! | TGAATATATTGCAAAAAAAG+TGG | + | chr4.2:21903375-21903394 | None:intergenic | 20.0% |
| !! | TGAGAATAGTTCTTATAATT+GGG | + | chr4.2:21902736-21902755 | None:intergenic | 20.0% |
| !! | TTATATAAGGTGAAATAAGT+GGG | + | chr4.2:21902297-21902316 | None:intergenic | 20.0% |
| !! | TTATTTCACTTGATTCTATT+AGG | + | chr4.2:21903610-21903629 | None:intergenic | 20.0% |
| !!! | AAATTTTGAATAATGCATAG+AGG | + | chr4.2:21903422-21903441 | None:intergenic | 20.0% |
| !!! | GTAGTAAAACAATGTATTTT+GGG | - | chr4.2:21905514-21905533 | MS.gene39423:intron | 20.0% |
| !!! | TCTTGTAAATTCCAATATTT+TGG | - | chr4.2:21904990-21905009 | MS.gene39423:CDS | 20.0% |
| !!! | TTTTTTGTTATGGCATATAT+TGG | - | chr4.2:21905740-21905759 | MS.gene39423:intron | 20.0% |
| ! | AATACATTTCCAACTTTGTA+TGG | - | chr4.2:21902704-21902723 | MS.gene39423:intron | 25.0% |
| ! | ATCTTTAATGTCTACACTTA+CGG | + | chr4.2:21903667-21903686 | None:intergenic | 25.0% |
| ! | ATGAACTATTCTATAAACCT+AGG | - | chr4.2:21904373-21904392 | MS.gene39423:CDS | 25.0% |
| ! | ATTAATTTAACAAATCCCCT+AGG | + | chr4.2:21904393-21904412 | None:intergenic | 25.0% |
| ! | CTTCAATGATTTATAGAATC+AGG | + | chr4.2:21904213-21904232 | None:intergenic | 25.0% |
| ! | GATTAAAGAATTTCATGCTT+AGG | + | chr4.2:21905472-21905491 | None:intergenic | 25.0% |
| ! | GTGAGAATAGTTCTTATAAT+TGG | + | chr4.2:21902737-21902756 | None:intergenic | 25.0% |
| ! | GTGCAAAATGATTAATTCTT+TGG | + | chr4.2:21902469-21902488 | None:intergenic | 25.0% |
| ! | TAAAAGTCTATTATGTTCCA+TGG | - | chr4.2:21902663-21902682 | MS.gene39423:intron | 25.0% |
| ! | TATGGTTAATAACAGCAAAT+AGG | + | chr4.2:21904435-21904454 | None:intergenic | 25.0% |
| ! | TCACTATTATACAACATTTC+TGG | - | chr4.2:21904002-21904021 | MS.gene39423:intron | 25.0% |
| ! | TGAAAAACATTCGATTCTTA+TGG | - | chr4.2:21902140-21902159 | MS.gene39423:CDS | 25.0% |
| ! | TGAACAATCAACAGTTATTA+CGG | + | chr4.2:21904571-21904590 | None:intergenic | 25.0% |
| ! | TGAACTATTCTATAAACCTA+GGG | - | chr4.2:21904374-21904393 | MS.gene39423:CDS | 25.0% |
| ! | TGTTAGTTCCTTAATTCATT+AGG | + | chr4.2:21905613-21905632 | None:intergenic | 25.0% |
| ! | TGTTGTATAATAGTGAATCT+CGG | + | chr4.2:21903998-21904017 | None:intergenic | 25.0% |
| ! | TTAAGGTTCAAATAGAAGAT+AGG | + | chr4.2:21903399-21903418 | None:intergenic | 25.0% |
| ! | TTCTTAAAGATGAGAACATA+TGG | + | chr4.2:21904164-21904183 | None:intergenic | 25.0% |
| ! | TTGAAGGTTCATTTCAAAAT+TGG | - | chr4.2:21903705-21903724 | MS.gene39423:intron | 25.0% |
| !! | AGTGGTTAAAGCATTATATA+AGG | + | chr4.2:21902310-21902329 | None:intergenic | 25.0% |
| !! | ATATACAATTTCGGTTCTTT+TGG | + | chr4.2:21905293-21905312 | None:intergenic | 25.0% |
| !! | ATCTAGATTTTTGTCTAATG+TGG | - | chr4.2:21903232-21903251 | MS.gene39423:intron | 25.0% |
| !! | CATATTTTCTTAAACAGGTT+TGG | - | chr4.2:21903849-21903868 | MS.gene39423:intron | 25.0% |
| !! | CATCTGAAGCAAAAAAATTA+AGG | + | chr4.2:21904043-21904062 | None:intergenic | 25.0% |
| !! | GGTAGTAAAACAATGTATTT+TGG | - | chr4.2:21905513-21905532 | MS.gene39423:CDS | 25.0% |
| !! | GTTTTTATCCATCCTTTATA+TGG | - | chr4.2:21904253-21904272 | MS.gene39423:intron | 25.0% |
| !! | TGTTCTCATCTTTAAGAAAA+AGG | - | chr4.2:21904166-21904185 | MS.gene39423:intron | 25.0% |
| !! | TTTGAAATGAACCTTCAAAT+GGG | + | chr4.2:21903703-21903722 | None:intergenic | 25.0% |
| !!! | ATGACTTGATGATCAATTTT+AGG | + | chr4.2:21905146-21905165 | None:intergenic | 25.0% |
| !!! | ATTTTTTTGCTTCAGATGTA+AGG | - | chr4.2:21904045-21904064 | MS.gene39423:intron | 25.0% |
| !!! | TGATCTTCAGTTTTTTGTTA+TGG | - | chr4.2:21905730-21905749 | MS.gene39423:intron | 25.0% |
| !!! | TGTTTATTTTCTGTAGATGA+GGG | - | chr4.2:21905243-21905262 | MS.gene39423:CDS | 25.0% |
| !!! | TTAGTTCTCTCTAAGTTTTA+TGG | - | chr4.2:21903889-21903908 | MS.gene39423:intron | 25.0% |
| !!! | TTATCATTTTTCACCATTCT+AGG | - | chr4.2:21902257-21902276 | MS.gene39423:intron | 25.0% |
| !!! | TTTTGAAATGAACCTTCAAA+TGG | + | chr4.2:21903704-21903723 | None:intergenic | 25.0% |
| !!! | TTTTTTTGCTTCAGATGTAA+GGG | - | chr4.2:21904046-21904065 | MS.gene39423:intron | 25.0% |
| AAAACAAGCCAACTTACATT+AGG | + | chr4.2:21903187-21903206 | None:intergenic | 30.0% | |
| AAAACCATTCAAGGAATGAT+CGG | + | chr4.2:21902861-21902880 | None:intergenic | 30.0% | |
| AAAAGGAAAATCATTCCAAG+AGG | + | chr4.2:21903284-21903303 | None:intergenic | 30.0% | |
| AAAGGAAAATCATTCCAAGA+GGG | + | chr4.2:21903283-21903302 | None:intergenic | 30.0% | |
| AAATGTAACTACCAATGATC+AGG | - | chr4.2:21902580-21902599 | MS.gene39423:intron | 30.0% | |
| AACAATCAACAGTTATTACG+GGG | + | chr4.2:21904569-21904588 | None:intergenic | 30.0% | |
| AACTTATGTATCCCATTTGA+AGG | - | chr4.2:21903689-21903708 | MS.gene39423:intron | 30.0% | |
| AAGGTTCATTTCAAAATTGG+AGG | - | chr4.2:21903708-21903727 | MS.gene39423:intron | 30.0% | |
| AGCACGATCATATACAATTT+CGG | + | chr4.2:21905302-21905321 | None:intergenic | 30.0% | |
| AGTTGTAAAAGAAAATCCAC+TGG | - | chr4.2:21905407-21905426 | MS.gene39423:CDS | 30.0% | |
| ATAAGGCGGTATAAGAAATT+TGG | - | chr4.2:21903209-21903228 | MS.gene39423:intron | 30.0% | |
| ATGTGTTTCTCATACAAGTA+AGG | - | chr4.2:21902949-21902968 | MS.gene39423:intron | 30.0% | |
| CTGATGAAAGCAAAAGAAAA+GGG | + | chr4.2:21905200-21905219 | None:intergenic | 30.0% | |
| GAACAATCAACAGTTATTAC+GGG | + | chr4.2:21904570-21904589 | None:intergenic | 30.0% | |
| GAACTATTCTATAAACCTAG+GGG | - | chr4.2:21904375-21904394 | MS.gene39423:CDS | 30.0% | |
| GACATGATGGTATTAACTTA+TGG | - | chr4.2:21903254-21903273 | MS.gene39423:CDS | 30.0% | |
| GTTGTATAATAGTGAATCTC+GGG | + | chr4.2:21903997-21904016 | None:intergenic | 30.0% | |
| TAGATCGTAGTCCAAAATAT+TGG | + | chr4.2:21905004-21905023 | None:intergenic | 30.0% | |
| TAGATTCACTTCCTTACTAT+AGG | - | chr4.2:21905037-21905056 | MS.gene39423:CDS | 30.0% | |
| TATGCAAAAAGCTTCTGTTA+AGG | + | chr4.2:21904811-21904830 | None:intergenic | 30.0% | |
| TCAGGGATGTTCTAATAAAA+GGG | - | chr4.2:21903826-21903845 | MS.gene39423:intron | 30.0% | |
| TGAATAATGCATAGAGGTTA+AGG | + | chr4.2:21903416-21903435 | None:intergenic | 30.0% | |
| TGTACAACATACAAAAGTCA+GGG | - | chr4.2:21903809-21903828 | MS.gene39423:intron | 30.0% | |
| TTAGATCAACAGGTACTTTA+GGG | - | chr4.2:21904334-21904353 | MS.gene39423:CDS | 30.0% | |
| TTTAGATCAACAGGTACTTT+AGG | - | chr4.2:21904333-21904352 | MS.gene39423:CDS | 30.0% | |
| ! | AACTTTAGCAATCCTTTTTC+TGG | - | chr4.2:21905559-21905578 | MS.gene39423:intron | 30.0% |
| ! | AATGATAATGTGATACCTTG+TGG | + | chr4.2:21902245-21902264 | None:intergenic | 30.0% |
| ! | ACCAGATGATATGATTGTTT+TGG | - | chr4.2:21905064-21905083 | MS.gene39423:CDS | 30.0% |
| ! | ATAATAATTTTCGATCCGCT+AGG | + | chr4.2:21903085-21903104 | None:intergenic | 30.0% |
| ! | TAGAAGTGGATTTATGTCAT+AGG | + | chr4.2:21904646-21904665 | None:intergenic | 30.0% |
| ! | TATTGTTGTTATCAGTCGAT+TGG | - | chr4.2:21903102-21903121 | MS.gene39423:intron | 30.0% |
| ! | TTCTGATTTTCTGCATTGTT+GGG | + | chr4.2:21905943-21905962 | None:intergenic | 30.0% |
| ! | TTTTTGCATAGCCATATTAG+AGG | - | chr4.2:21904821-21904840 | MS.gene39423:intron | 30.0% |
| !! | AAGGGCATATTTTCTTAAAC+AGG | - | chr4.2:21903844-21903863 | MS.gene39423:intron | 30.0% |
| !! | CTGTTTATTTTCTGTAGATG+AGG | - | chr4.2:21905242-21905261 | MS.gene39423:CDS | 30.0% |
| !! | GAGAACTAAAGAACTTTTTC+AGG | + | chr4.2:21903878-21903897 | None:intergenic | 30.0% |
| !! | TATTTTGGACTACGATCTAT+TGG | - | chr4.2:21905005-21905024 | MS.gene39423:CDS | 30.0% |
| AAATGAAACAGAATGACCAG+TGG | + | chr4.2:21905426-21905445 | None:intergenic | 35.0% | |
| AAGGAAAATCATTCCAAGAG+GGG | + | chr4.2:21903282-21903301 | None:intergenic | 35.0% | |
| AATCTGCTTGTAACTTAAGC+TGG | - | chr4.2:21905488-21905507 | MS.gene39423:CDS | 35.0% | |
| AATGACTTCAACAAGCAAGT+CGG | + | chr4.2:21903143-21903162 | None:intergenic | 35.0% | |
| ACAGTTATTACGGGGTTATT+TGG | + | chr4.2:21904561-21904580 | None:intergenic | 35.0% | |
| ACTCTCAACCATATAAAGGA+TGG | + | chr4.2:21904264-21904283 | None:intergenic | 35.0% | |
| AGCATCACTAAAACCATTCA+AGG | + | chr4.2:21902870-21902889 | None:intergenic | 35.0% | |
| ATAACTTATTGTGCTGTCTG+AGG | - | chr4.2:21902529-21902548 | MS.gene39423:intron | 35.0% | |
| ATCTGGTACAACCTATAGTA+AGG | + | chr4.2:21905051-21905070 | None:intergenic | 35.0% | |
| ATTATCCAAACAGAGCCTTA+GGG | - | chr4.2:21902375-21902394 | MS.gene39423:CDS | 35.0% | |
| CAGTTATTACGGGGTTATTT+GGG | + | chr4.2:21904560-21904579 | None:intergenic | 35.0% | |
| CATCACTCTCAACCATATAA+AGG | + | chr4.2:21904268-21904287 | None:intergenic | 35.0% | |
| CATGATTCTAGCATGCATAA+GGG | + | chr4.2:21902819-21902838 | None:intergenic | 35.0% | |
| CATTTCAAAATTGGAGGTGA+TGG | - | chr4.2:21903714-21903733 | MS.gene39423:intron | 35.0% | |
| CCATTCACACAATTTCAGTT+AGG | - | chr4.2:21904290-21904309 | MS.gene39423:CDS | 35.0% | |
| CCTAACTGAAATTGTGTGAA+TGG | + | chr4.2:21904293-21904312 | None:intergenic | 35.0% | |
| CCTGATGAAAGCAAAAGAAA+AGG | + | chr4.2:21905201-21905220 | None:intergenic | 35.0% | |
| CTGTACAACATACAAAAGTC+AGG | - | chr4.2:21903808-21903827 | MS.gene39423:intron | 35.0% | |
| CTTATGCATGCTAGAATCAT+GGG | - | chr4.2:21902818-21902837 | MS.gene39423:CDS | 35.0% | |
| GAACTTCTTGTACCAGAAAA+AGG | + | chr4.2:21905574-21905593 | None:intergenic | 35.0% | |
| GATTGCATCCTAATGTAAGT+TGG | - | chr4.2:21903176-21903195 | MS.gene39423:intron | 35.0% | |
| GCCAAAACAATCATATCATC+TGG | + | chr4.2:21905068-21905087 | None:intergenic | 35.0% | |
| GGAATTAAGTAGACCTAGAA+TGG | + | chr4.2:21902273-21902292 | None:intergenic | 35.0% | |
| GGAATTACAAAAACCTTCTC+CGG | + | chr4.2:21903004-21903023 | None:intergenic | 35.0% | |
| GTCAGGGATGTTCTAATAAA+AGG | - | chr4.2:21903825-21903844 | MS.gene39423:intron | 35.0% | |
| TATAAGGTGAAATAAGTGGG+TGG | + | chr4.2:21902294-21902313 | None:intergenic | 35.0% | |
| TATGGCATATATTGGAGCTA+TGG | - | chr4.2:21905748-21905767 | MS.gene39423:intron | 35.0% | |
| TCATACAAGTAAGGAGAACA+CGG | - | chr4.2:21902958-21902977 | MS.gene39423:intron | 35.0% | |
| TGATTAAAGAATGGTCTCCA+TGG | + | chr4.2:21902683-21902702 | None:intergenic | 35.0% | |
| TTCTATTAGGCTCCTACATA+AGG | + | chr4.2:21903597-21903616 | None:intergenic | 35.0% | |
| TTTACCGATCATTCCTTGAA+TGG | - | chr4.2:21902854-21902873 | MS.gene39423:CDS | 35.0% | |
| TTTGTCTAATGTGGACATGA+TGG | - | chr4.2:21903241-21903260 | MS.gene39423:CDS | 35.0% | |
| TTTGTGACACAACTTAGAAG+TGG | + | chr4.2:21904660-21904679 | None:intergenic | 35.0% | |
| ! | CAAGGTTTTGCAATTTACCT+TGG | - | chr4.2:21902907-21902926 | MS.gene39423:intron | 35.0% |
| ! | CATTTTTGCTTCGTCATGTT+CGG | - | chr4.2:21905796-21905815 | MS.gene39423:intron | 35.0% |
| ! | CCTTTTCTTTTGCTTTCATC+AGG | - | chr4.2:21905198-21905217 | MS.gene39423:CDS | 35.0% |
| ! | CTTCTGATTTTCTGCATTGT+TGG | + | chr4.2:21905944-21905963 | None:intergenic | 35.0% |
| ! | CTTTTCAACACTTTGTCATG+AGG | - | chr4.2:21902793-21902812 | MS.gene39423:CDS | 35.0% |
| !! | AAAGTACCACACAACTTTTG+AGG | + | chr4.2:21904316-21904335 | None:intergenic | 35.0% |
| !! | CAAGATCGAGTTGAATTGTT+GGG | - | chr4.2:21903783-21903802 | MS.gene39423:intron | 35.0% |
| !! | CTCATGACAAAGTGTTGAAA+AGG | + | chr4.2:21902795-21902814 | None:intergenic | 35.0% |
| !! | GATGATGAAGCCATTTTAAG+TGG | - | chr4.2:21904070-21904089 | MS.gene39423:intron | 35.0% |
| !! | TCAAGATCGAGTTGAATTGT+TGG | - | chr4.2:21903782-21903801 | MS.gene39423:intron | 35.0% |
| !! | TGGAAGTATTCACATGAACA+AGG | - | chr4.2:21902889-21902908 | MS.gene39423:intron | 35.0% |
| !! | TGTTTTAGACACCTATCTTG+CGG | - | chr4.2:21905675-21905694 | MS.gene39423:intron | 35.0% |
| !!! | AAGTTGGCTTGTTTTGCATA+AGG | - | chr4.2:21903192-21903211 | MS.gene39423:intron | 35.0% |
| !!! | ATTTTGCTGGTTCCTTATGT+AGG | - | chr4.2:21903582-21903601 | MS.gene39423:intron | 35.0% |
| !!! | GATTTTTTCTATCCCAACGT+TGG | - | chr4.2:21902168-21902187 | MS.gene39423:CDS | 35.0% |
| !!! | TTGAATGGTTTTAGTGATGC+TGG | - | chr4.2:21902869-21902888 | MS.gene39423:intron | 35.0% |
| AACCAGCAAAATAGCAACAC+TGG | + | chr4.2:21903574-21903593 | None:intergenic | 40.0% | |
| AAGGAACTGTAACAGTGCAA+AGG | + | chr4.2:21904792-21904811 | None:intergenic | 40.0% | |
| AATGCTACGTTTACCAACCA+AGG | + | chr4.2:21904619-21904638 | None:intergenic | 40.0% | |
| ACAACTAGCAGCCTCTAATA+TGG | + | chr4.2:21904835-21904854 | None:intergenic | 40.0% | |
| ACAGCAAATAGGTGCTTTAG+AGG | + | chr4.2:21904424-21904443 | None:intergenic | 40.0% | |
| AGAACCTGATCCAAGTGATA+TGG | - | chr4.2:21905088-21905107 | MS.gene39423:CDS | 40.0% | |
| AGGAAAATCATTCCAAGAGG+GGG | + | chr4.2:21903281-21903300 | None:intergenic | 40.0% | |
| ATATTAGAGGCTGCTAGTTG+TGG | - | chr4.2:21904834-21904853 | MS.gene39423:intron | 40.0% | |
| ATCTACTTGAACGACTCTCA+CGG | - | chr4.2:21905341-21905360 | MS.gene39423:CDS | 40.0% | |
| ATGCTACGTTTACCAACCAA+GGG | + | chr4.2:21904618-21904637 | None:intergenic | 40.0% | |
| ATGCTTATGGAAAACGCTCT+GGG | - | chr4.2:21902618-21902637 | MS.gene39423:intron | 40.0% | |
| CAAGCTTCAGCCACTTAAAA+TGG | + | chr4.2:21904083-21904102 | None:intergenic | 40.0% | |
| CCATGATTCTAGCATGCATA+AGG | + | chr4.2:21902820-21902839 | None:intergenic | 40.0% | |
| CCTTATGCATGCTAGAATCA+TGG | - | chr4.2:21902817-21902836 | MS.gene39423:CDS | 40.0% | |
| GAAAGAATTACCGTTGTGCA+TGG | - | chr4.2:21902761-21902780 | MS.gene39423:intron | 40.0% | |
| GATTATCCAAACAGAGCCTT+AGG | - | chr4.2:21902374-21902393 | MS.gene39423:CDS | 40.0% | |
| GTGGTTGTAACTCATGCTTA+TGG | - | chr4.2:21902605-21902624 | MS.gene39423:intron | 40.0% | |
| GTGTGGTACTTTAGATCAAC+AGG | - | chr4.2:21904324-21904343 | MS.gene39423:CDS | 40.0% | |
| TCTCAATGCTTGCTCAACTT+AGG | - | chr4.2:21902219-21902238 | MS.gene39423:CDS | 40.0% | |
| TGCTAGAATCATGGGATACA+AGG | - | chr4.2:21902826-21902845 | MS.gene39423:CDS | 40.0% | |
| TGCTTGTAACTTAAGCTGGT+TGG | - | chr4.2:21905492-21905511 | MS.gene39423:CDS | 40.0% | |
| TGTAACTACCAATGATCAGG+TGG | - | chr4.2:21902583-21902602 | MS.gene39423:intron | 40.0% | |
| TTATCCAAACAGAGCCTTAG+GGG | - | chr4.2:21902376-21902395 | MS.gene39423:CDS | 40.0% | |
| TTGGGTGAGAGAATGAAATC+TGG | + | chr4.2:21905889-21905908 | None:intergenic | 40.0% | |
| TTTGCTTATGTACCCTTGGT+TGG | - | chr4.2:21904603-21904622 | MS.gene39423:intron | 40.0% | |
| ! | ACCAAGGGTACATAAGCAAA+AGG | + | chr4.2:21904603-21904622 | None:intergenic | 40.0% |
| ! | ACCTTTTGCTTATGTACCCT+TGG | - | chr4.2:21904599-21904618 | MS.gene39423:intron | 40.0% |
| ! | ATAATTTTCGATCCGCTAGG+AGG | + | chr4.2:21903082-21903101 | None:intergenic | 40.0% |
| ! | GATTTTCCTTTTTGTCCTGC+TGG | - | chr4.2:21903292-21903311 | MS.gene39423:CDS | 40.0% |
| ! | TTTTTCTATCCCAACGTTGG+TGG | - | chr4.2:21902171-21902190 | MS.gene39423:CDS | 40.0% |
| !! | AGTCGATTGGTTTACCGTAA+AGG | - | chr4.2:21903115-21903134 | MS.gene39423:intron | 40.0% |
| !!! | TTCCAGTGTTGCTATTTTGC+TGG | - | chr4.2:21903569-21903588 | MS.gene39423:intron | 40.0% |
| !!! | TTGGCTTGTTTTGCATAAGG+CGG | - | chr4.2:21903195-21903214 | MS.gene39423:intron | 40.0% |
| AACATCCCTCCAATCCATCA+CGG | + | chr4.2:21905912-21905931 | None:intergenic | 45.0% | |
| AACTACCAATGATCAGGTGG+TGG | - | chr4.2:21902586-21902605 | MS.gene39423:intron | 45.0% | |
| ACGGGGTTATTTGGGTGAAA+CGG | + | chr4.2:21904552-21904571 | None:intergenic | 45.0% | |
| ACTGTAACAGTGCAAAGGTC+AGG | + | chr4.2:21904787-21904806 | None:intergenic | 45.0% | |
| AGATGAGGGAACTCTATAGC+TGG | - | chr4.2:21905257-21905276 | MS.gene39423:CDS | 45.0% | |
| AGTTCATGCCCTGTCATTCA+GGG | + | chr4.2:21904360-21904379 | None:intergenic | 45.0% | |
| CAACGATGTTGCTCTGTCAA+TGG | + | chr4.2:21903504-21903523 | None:intergenic | 45.0% | |
| CATGCTTATGGAAAACGCTC+TGG | - | chr4.2:21902617-21902636 | MS.gene39423:intron | 45.0% | |
| CTCACGGTACACACTTTCAT+AGG | - | chr4.2:21905357-21905376 | MS.gene39423:CDS | 45.0% | |
| GCATATATTGGAGCTATGGC+AGG | - | chr4.2:21905752-21905771 | MS.gene39423:intron | 45.0% | |
| GGAAAATCATTCCAAGAGGG+GGG | + | chr4.2:21903280-21903299 | None:intergenic | 45.0% | |
| GGTTTGATGTCCATGCACAA+CGG | + | chr4.2:21902774-21902793 | None:intergenic | 45.0% | |
| GTTAGGCCTCAAAAGTTGTG+TGG | - | chr4.2:21904307-21904326 | MS.gene39423:CDS | 45.0% | |
| TAACAGTGCAAAGGTCAGGT+AGG | + | chr4.2:21904783-21904802 | None:intergenic | 45.0% | |
| TACAACCACCACCTGATCAT+TGG | + | chr4.2:21902594-21902613 | None:intergenic | 45.0% | |
| TAGTTCATGCCCTGTCATTC+AGG | + | chr4.2:21904361-21904380 | None:intergenic | 45.0% | |
| TGCCAAGTTTAAGCCAGTGT+CGG | - | chr4.2:21903039-21903058 | MS.gene39423:CDS | 45.0% | |
| TGCTTATGGAAAACGCTCTG+GGG | - | chr4.2:21902619-21902638 | MS.gene39423:intron | 45.0% | |
| TTAGCCTGCTGATGATATCG+AGG | - | chr4.2:21905858-21905877 | MS.gene39423:intron | 45.0% | |
| TTGGCAGTGTCAACAGCATT+AGG | + | chr4.2:21903025-21903044 | None:intergenic | 45.0% | |
| ! | ACCTCTCATTTTCTCCCCTA+AGG | + | chr4.2:21902393-21902412 | None:intergenic | 45.0% |
| ! | GGCAGGAAAGATCTTTTGCT+TGG | - | chr4.2:21905704-21905723 | MS.gene39423:intron | 45.0% |
| ! | GTAAGGAGAACACGGTTTTG+AGG | - | chr4.2:21902966-21902985 | MS.gene39423:CDS | 45.0% |
| ! | TCTGGGGTTAGATACATGAC+TGG | - | chr4.2:21902635-21902654 | MS.gene39423:intron | 45.0% |
| !! | AGTTGAGCAAGCATTGAGAG+AGG | + | chr4.2:21902218-21902237 | None:intergenic | 45.0% |
| !! | GGGAGTGTTCCATACAAAGT+TGG | + | chr4.2:21902716-21902735 | None:intergenic | 45.0% |
| !! | GTGATGGACCTAAACGTGTA+CGG | - | chr4.2:21903730-21903749 | MS.gene39423:intron | 45.0% |
| ACACCTATCTTGCGGAGCAT+GGG | - | chr4.2:21905683-21905702 | MS.gene39423:intron | 50.0% | |
| ACCTAAACGTGTACGGTTGG+AGG | - | chr4.2:21903737-21903756 | MS.gene39423:intron | 50.0% | |
| ATACTTGTGGTGCCTACCTC+AGG | + | chr4.2:21904894-21904913 | None:intergenic | 50.0% | |
| ATTCTCGACACCACCAACGT+TGG | + | chr4.2:21902184-21902203 | None:intergenic | 50.0% | |
| ATTCTCTCACCCAACCGTGA+TGG | - | chr4.2:21905895-21905914 | MS.gene39423:CDS | 50.0% | |
| ATTGCGCGCACCATATCACT+TGG | + | chr4.2:21905101-21905120 | None:intergenic | 50.0% | |
| CGCACCATATCACTTGGATC+AGG | + | chr4.2:21905095-21905114 | None:intergenic | 50.0% | |
| CTTGCTCAACTTAGGCCACA+AGG | - | chr4.2:21902227-21902246 | MS.gene39423:CDS | 50.0% | |
| GCAGCATAGTTATCGCCTTC+TGG | + | chr4.2:21905124-21905143 | None:intergenic | 50.0% | |
| GCCTTAGGGGAGAAAATGAG+AGG | - | chr4.2:21902389-21902408 | MS.gene39423:CDS | 50.0% | |
| GGATGCAATCGACACACTTC+TGG | + | chr4.2:21903166-21903185 | None:intergenic | 50.0% | |
| GGGGTTAGATACATGACTGG+TGG | - | chr4.2:21902638-21902657 | MS.gene39423:intron | 50.0% | |
| TACCTTGGCAGATGTGAGTC+AGG | - | chr4.2:21902922-21902941 | MS.gene39423:intron | 50.0% | |
| TCCTCCAACCGTACACGTTT+AGG | + | chr4.2:21903741-21903760 | None:intergenic | 50.0% | |
| TGGACCTAAACGTGTACGGT+TGG | - | chr4.2:21903734-21903753 | MS.gene39423:intron | 50.0% | |
| TTAACTTATGGCCCCCCTCT+TGG | - | chr4.2:21903266-21903285 | MS.gene39423:CDS | 50.0% | |
| TTCTCCCCTAAGGCTCTGTT+TGG | + | chr4.2:21902383-21902402 | None:intergenic | 50.0% | |
| TTCTCGACACCACCAACGTT+GGG | + | chr4.2:21902183-21902202 | None:intergenic | 50.0% | |
| ! | CAAGCAAGTCGGCTCCTTTA+CGG | + | chr4.2:21903132-21903151 | None:intergenic | 50.0% |
| ! | CAAGTTTAAGCCAGTGTCGG+AGG | - | chr4.2:21903042-21903061 | MS.gene39423:CDS | 50.0% |
| ! | GAAGCACCAGCAGGACAAAA+AGG | + | chr4.2:21903301-21903320 | None:intergenic | 50.0% |
| !! | ACTTTAGGGCCCTGAATGAC+AGG | - | chr4.2:21904348-21904367 | MS.gene39423:CDS | 50.0% |
| !! | CTCCGACACTGGCTTAAACT+TGG | + | chr4.2:21903044-21903063 | None:intergenic | 50.0% |
| !! | CTTTAGGGCCCTGAATGACA+GGG | - | chr4.2:21904349-21904368 | MS.gene39423:CDS | 50.0% |
| !!! | GAGAACACGGTTTTGAGGTC+CGG | - | chr4.2:21902971-21902990 | MS.gene39423:CDS | 50.0% |
| AACCTTCTCCGGCACCAAAC+CGG | + | chr4.2:21902993-21903012 | None:intergenic | 55.0% | |
| AGCCTGACTCACATCTGCCA+AGG | + | chr4.2:21902927-21902946 | None:intergenic | 55.0% | |
| CCAGAGGTCATGCGACAAAC+TGG | + | chr4.2:21904517-21904536 | None:intergenic | 55.0% | |
| CCAGTTTGTCGCATGACCTC+TGG | - | chr4.2:21904514-21904533 | MS.gene39423:intron | 55.0% | |
| CCCTCCAATCCATCACGGTT+GGG | + | chr4.2:21905907-21905926 | None:intergenic | 55.0% | |
| GACACCTATCTTGCGGAGCA+TGG | - | chr4.2:21905682-21905701 | MS.gene39423:intron | 55.0% | |
| GCCTCCTCGATATCATCAGC+AGG | + | chr4.2:21905865-21905884 | None:intergenic | 55.0% | |
| GCCTGCTGATGATATCGAGG+AGG | - | chr4.2:21905861-21905880 | MS.gene39423:intron | 55.0% | |
| TATGGTGCGCGCAATCCAGA+AGG | - | chr4.2:21905106-21905125 | MS.gene39423:CDS | 55.0% | |
| TCCCTCCAATCCATCACGGT+TGG | + | chr4.2:21905908-21905927 | None:intergenic | 55.0% | |
| TTAACAGTCAGCACGCGCGT+CGG | - | chr4.2:21904861-21904880 | MS.gene39423:intron | 55.0% | |
| ! | GTTTAAGCCAGTGTCGGAGG+CGG | - | chr4.2:21903045-21903064 | MS.gene39423:CDS | 55.0% |
| !! | ACCCAACCGTGATGGATTGG+AGG | - | chr4.2:21905903-21905922 | MS.gene39423:CDS | 55.0% |
| !! | CCCAACCGTGATGGATTGGA+GGG | - | chr4.2:21905904-21905923 | MS.gene39423:CDS | 55.0% |
| !! | CGCATGACCTCTGGAGCAAA+GGG | - | chr4.2:21904523-21904542 | MS.gene39423:intron | 55.0% |
| !! | CTCACCCAACCGTGATGGAT+TGG | - | chr4.2:21905900-21905919 | MS.gene39423:CDS | 55.0% |
| !! | CTCTGTCAAGAAGCACCAGC+AGG | + | chr4.2:21903310-21903329 | None:intergenic | 55.0% |
| !! | GCATGACCTCTGGAGCAAAG+GGG | - | chr4.2:21904524-21904543 | MS.gene39423:intron | 55.0% |
| !! | TCGCATGACCTCTGGAGCAA+AGG | - | chr4.2:21904522-21904541 | MS.gene39423:intron | 55.0% |
| !! | TTTGAGGTCCGGTTTGGTGC+CGG | - | chr4.2:21902982-21903001 | MS.gene39423:CDS | 55.0% |
| !!! | CACGGTTTTGAGGTCCGGTT+TGG | - | chr4.2:21902976-21902995 | MS.gene39423:CDS | 55.0% |
| CTATCTTGCGGAGCATGGGC+AGG | - | chr4.2:21905687-21905706 | MS.gene39423:intron | 60.0% | |
| CTGCCCATGCTCCGCAAGAT+AGG | + | chr4.2:21905689-21905708 | None:intergenic | 60.0% | |
| !! | GTCGGAGGTGTTCCTGAGGT+AGG | - | chr4.2:21904879-21904898 | MS.gene39423:intron | 60.0% |
| ACGGTGCCCCTTTGCTCCAG+AGG | + | chr4.2:21904533-21904552 | None:intergenic | 65.0% | |
| ! | TAAGCCAGTGTCGGAGGCGG+AGG | - | chr4.2:21903048-21903067 | MS.gene39423:CDS | 65.0% |
| !! | GAGGAGGAGCGTCCTCCTAG+CGG | - | chr4.2:21903067-21903086 | MS.gene39423:intron | 65.0% |
| !! | GTCCGGTTTGGTGCCGGAGA+AGG | - | chr4.2:21902988-21903007 | MS.gene39423:CDS | 65.0% |
| ACAGTCAGCACGCGCGTCGG+AGG | - | chr4.2:21904864-21904883 | MS.gene39423:intron | 70.0% | |
| TCCTCCTCCGCCTCCGACAC+TGG | + | chr4.2:21903055-21903074 | None:intergenic | 70.0% | |
| !! | GCGCGTCGGAGGTGTTCCTG+AGG | - | chr4.2:21904875-21904894 | MS.gene39423:intron | 70.0% |
| ! | GCCAGTGTCGGAGGCGGAGG+AGG | - | chr4.2:21903051-21903070 | MS.gene39423:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 21902117 | 21906017 | 21902117 | ID=MS.gene39423 |
| chr4.2 | mRNA | 21902117 | 21906017 | 21902117 | ID=MS.gene39423.t1;Parent=MS.gene39423 |
| chr4.2 | exon | 21905886 | 21906017 | 21905886 | ID=MS.gene39423.t1.exon1;Parent=MS.gene39423.t1 |
| chr4.2 | CDS | 21905886 | 21906017 | 21905886 | ID=cds.MS.gene39423.t1;Parent=MS.gene39423.t1 |
| chr4.2 | exon | 21904945 | 21905532 | 21904945 | ID=MS.gene39423.t1.exon2;Parent=MS.gene39423.t1 |
| chr4.2 | CDS | 21904945 | 21905532 | 21904945 | ID=cds.MS.gene39423.t1;Parent=MS.gene39423.t1 |
| chr4.2 | exon | 21904269 | 21904423 | 21904269 | ID=MS.gene39423.t1.exon3;Parent=MS.gene39423.t1 |
| chr4.2 | CDS | 21904269 | 21904423 | 21904269 | ID=cds.MS.gene39423.t1;Parent=MS.gene39423.t1 |
| chr4.2 | exon | 21903238 | 21903328 | 21903238 | ID=MS.gene39423.t1.exon4;Parent=MS.gene39423.t1 |
| chr4.2 | CDS | 21903238 | 21903328 | 21903238 | ID=cds.MS.gene39423.t1;Parent=MS.gene39423.t1 |
| chr4.2 | exon | 21902959 | 21903075 | 21902959 | ID=MS.gene39423.t1.exon5;Parent=MS.gene39423.t1 |
| chr4.2 | CDS | 21902959 | 21903075 | 21902959 | ID=cds.MS.gene39423.t1;Parent=MS.gene39423.t1 |
| chr4.2 | exon | 21902772 | 21902875 | 21902772 | ID=MS.gene39423.t1.exon6;Parent=MS.gene39423.t1 |
| chr4.2 | CDS | 21902772 | 21902875 | 21902772 | ID=cds.MS.gene39423.t1;Parent=MS.gene39423.t1 |
| chr4.2 | exon | 21902361 | 21902451 | 21902361 | ID=MS.gene39423.t1.exon7;Parent=MS.gene39423.t1 |
| chr4.2 | CDS | 21902361 | 21902451 | 21902361 | ID=cds.MS.gene39423.t1;Parent=MS.gene39423.t1 |
| chr4.2 | exon | 21902117 | 21902272 | 21902117 | ID=MS.gene39423.t1.exon8;Parent=MS.gene39423.t1 |
| chr4.2 | CDS | 21902117 | 21902272 | 21902117 | ID=cds.MS.gene39423.t1;Parent=MS.gene39423.t1 |
| Gene Sequence |
| Protein sequence |
