Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39443.t1 | XP_013457056.1 | 97.4 | 453 | 10 | 1 | 1 | 453 | 1 | 451 | 4.60E-251 | 876.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39443.t1 | Q680U9 | 74.1 | 452 | 115 | 1 | 1 | 452 | 1 | 450 | 3.5e-199 | 695.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39443.t1 | G7ZZ96 | 97.4 | 453 | 10 | 1 | 1 | 453 | 1 | 451 | 3.3e-251 | 876.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050355 | MS.gene39443 | 0.814673 | 1.37E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene39443 | 0.809387 | 1.94E-50 | -1.69E-46 |
| MS.gene054559 | MS.gene39443 | 0.803704 | 3.07E-49 | -1.69E-46 |
| MS.gene05604 | MS.gene39443 | 0.807847 | 4.14E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene39443 | 0.809753 | 1.62E-50 | -1.69E-46 |
| MS.gene057027 | MS.gene39443 | 0.803077 | 4.14E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene39443 | 0.809451 | 1.88E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene39443 | MS.gene012032 | PPI |
| MS.gene038754 | MS.gene39443 | PPI |
| MS.gene76435 | MS.gene39443 | PPI |
| MS.gene044565 | MS.gene39443 | PPI |
| MS.gene89597 | MS.gene39443 | PPI |
| MS.gene39443 | MS.gene80729 | PPI |
| MS.gene032967 | MS.gene39443 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39443.t1 | MTR_4g088935 | 97.351 | 453 | 10 | 1 | 1 | 453 | 1 | 451 | 0.0 | 910 |
| MS.gene39443.t1 | MTR_3g072660 | 96.909 | 453 | 13 | 1 | 1 | 453 | 1 | 452 | 0.0 | 907 |
| MS.gene39443.t1 | MTR_3g072660 | 95.364 | 453 | 13 | 2 | 1 | 453 | 1 | 445 | 0.0 | 885 |
| MS.gene39443.t1 | MTR_3g072660 | 96.364 | 385 | 13 | 1 | 1 | 385 | 1 | 384 | 0.0 | 761 |
| MS.gene39443.t1 | MTR_3g072660 | 94.545 | 385 | 13 | 2 | 1 | 385 | 1 | 377 | 0.0 | 739 |
| MS.gene39443.t1 | MTR_3g072660 | 96.369 | 358 | 12 | 1 | 1 | 358 | 1 | 357 | 0.0 | 705 |
| MS.gene39443.t1 | MTR_3g072660 | 99.083 | 327 | 3 | 0 | 127 | 453 | 1 | 327 | 0.0 | 675 |
| MS.gene39443.t1 | MTR_3g072660 | 96.942 | 327 | 3 | 1 | 127 | 453 | 1 | 320 | 0.0 | 654 |
| MS.gene39443.t1 | MTR_3g072660 | 95.973 | 298 | 11 | 1 | 1 | 298 | 1 | 297 | 0.0 | 582 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39443.t1 | AT4G17020 | 74.115 | 452 | 115 | 1 | 1 | 452 | 1 | 450 | 0.0 | 720 |
| MS.gene39443.t1 | AT4G17020 | 74.115 | 452 | 115 | 1 | 1 | 452 | 1 | 450 | 0.0 | 720 |
| MS.gene39443.t1 | AT4G17020 | 74.115 | 452 | 115 | 1 | 1 | 452 | 1 | 450 | 0.0 | 717 |
Find 88 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACCACTTTCAGTTAATTT+TGG | 0.182729 | 4.2:-22106549 | None:intergenic |
| GAGAATGGAATGGTTTATTA+TGG | 0.208075 | 4.2:+22110006 | MS.gene39443:CDS |
| TGTAGCTTTCTTACTACTTT+TGG | 0.229854 | 4.2:-22110100 | None:intergenic |
| ACCTGTGCCGGCTAAATTAT+TGG | 0.265931 | 4.2:+22104964 | MS.gene39443:CDS |
| ATTTCAGAGGAACATAATTA+AGG | 0.312303 | 4.2:+22107052 | MS.gene39443:CDS |
| CAATGTTGCCATTGATAGAT+TGG | 0.319945 | 4.2:+22105021 | MS.gene39443:CDS |
| CTCCTTTCTTGATGATGATT+CGG | 0.327686 | 4.2:-22107302 | None:intergenic |
| GATCATTGCCAAGAATTTCA+TGG | 0.333040 | 4.2:+22104478 | MS.gene39443:CDS |
| CACCATGTCCATGAAATTCT+TGG | 0.335342 | 4.2:-22104486 | None:intergenic |
| GGCTAAATTATTGGCGGAAT+GGG | 0.342205 | 4.2:+22104973 | MS.gene39443:CDS |
| CACAGCTTTGGTACATCATC+AGG | 0.346440 | 4.2:+22106681 | MS.gene39443:CDS |
| CAACTTCCAAATCTTATTGT+TGG | 0.350456 | 4.2:+22109056 | MS.gene39443:CDS |
| AATTATGTTCCTCTGAAATT+CGG | 0.351671 | 4.2:-22107048 | None:intergenic |
| ATAGCTCCAACAATAAGATT+TGG | 0.356315 | 4.2:-22109062 | None:intergenic |
| GTAGAGTTTATCGAGTTTGA+TGG | 0.382908 | 4.2:-22104522 | None:intergenic |
| TAAAGAAGAGCTTATGTTGA+AGG | 0.384164 | 4.2:-22106359 | None:intergenic |
| TGTGAGGCTCCCAACATTAG+AGG | 0.387289 | 4.2:+22106075 | MS.gene39443:CDS |
| TTACAGTTATTGCATATTGA+TGG | 0.396001 | 4.2:+22104941 | MS.gene39443:CDS |
| AGAATGGAATGGTTTATTAT+GGG | 0.397970 | 4.2:+22110007 | MS.gene39443:CDS |
| TGCAGATAGTCAGTTTCTTT+CGG | 0.401425 | 4.2:+22109654 | MS.gene39443:intron |
| TGGGCTGGTCAAACTTCAAC+AGG | 0.402831 | 4.2:+22107088 | MS.gene39443:CDS |
| GCTCCAAAATTAACTGAAAG+TGG | 0.432592 | 4.2:+22106546 | MS.gene39443:CDS |
| AAATCAAAATGCCTGAGGTT+AGG | 0.443637 | 4.2:+22104456 | None:intergenic |
| TAATAAACCATTCCATTCTC+TGG | 0.444435 | 4.2:-22110003 | None:intergenic |
| GCCTGAAAATGTCACAGATC+AGG | 0.448319 | 4.2:+22109718 | MS.gene39443:CDS |
| GCCAATAATTTAGCCGGCAC+AGG | 0.449508 | 4.2:-22104965 | None:intergenic |
| CGGCTAAATTATTGGCGGAA+TGG | 0.450685 | 4.2:+22104972 | MS.gene39443:CDS |
| AGATTCAAAGAAGATGCATT+TGG | 0.453803 | 4.2:+22110031 | MS.gene39443:CDS |
| TTAAGGACCTTGCAGACCTT+GGG | 0.454174 | 4.2:+22107069 | MS.gene39443:CDS |
| ATTAAGGACCTTGCAGACCT+TGG | 0.455377 | 4.2:+22107068 | MS.gene39443:CDS |
| GACTTATGCTCTGGAACAAT+GGG | 0.456255 | 4.2:+22106105 | MS.gene39443:CDS |
| CGTGTGACTGCGCCAGAGAA+TGG | 0.459544 | 4.2:+22109991 | MS.gene39443:CDS |
| AAGGTCTTGTCAACATGACT+TGG | 0.470934 | 4.2:-22106340 | None:intergenic |
| GTCTCAAGATCCTCTAATGT+TGG | 0.472624 | 4.2:-22106085 | None:intergenic |
| TTGAAGCTCTTGACAATGAC+AGG | 0.474245 | 4.2:+22105062 | MS.gene39443:CDS |
| AGCCTCACAGTAATATTAGA+AGG | 0.477881 | 4.2:-22106061 | None:intergenic |
| TCTCAAGATCCTCTAATGTT+GGG | 0.478745 | 4.2:-22106084 | None:intergenic |
| TATAGGGCAGGAAAGAAAGT+TGG | 0.482264 | 4.2:+22107236 | MS.gene39443:intron |
| TCTCCTTCTTGCAGCAAGAT+CGG | 0.483918 | 4.2:+22105622 | MS.gene39443:intron |
| CATTCCGCCAATAATTTAGC+CGG | 0.493364 | 4.2:-22104971 | None:intergenic |
| AGACTTATGCTCTGGAACAA+TGG | 0.494366 | 4.2:+22106104 | MS.gene39443:CDS |
| TCAAAGTTGCTTACCCTGGA+TGG | 0.494878 | 4.2:-22109882 | None:intergenic |
| TGGATACAAATGCACAGCTT+TGG | 0.501549 | 4.2:+22106669 | MS.gene39443:CDS |
| ATAAACAGAACCTCTGACTC+AGG | 0.514589 | 4.2:-22106405 | None:intergenic |
| CAATTGAACCAATCTATCAA+TGG | 0.514654 | 4.2:-22105029 | None:intergenic |
| TCATCTGCGAAGCTATTCTC+AGG | 0.530426 | 4.2:+22104555 | MS.gene39443:CDS |
| TGCCAAGAATTTCATGGACA+TGG | 0.531687 | 4.2:+22104484 | MS.gene39443:CDS |
| GGATCTTGAGACTTATGCTC+TGG | 0.535259 | 4.2:+22106096 | MS.gene39443:CDS |
| GTGGTGACAGATTAGGTTGT+GGG | 0.535695 | 4.2:+22109806 | MS.gene39443:intron |
| GGACCTTGCAGACCTTGGGC+TGG | 0.536902 | 4.2:+22107073 | MS.gene39443:CDS |
| TTCAAAGAAGATGCATTTGG+TGG | 0.539081 | 4.2:+22110034 | MS.gene39443:CDS |
| GTGTGGCAGGATGTATTTGA+AGG | 0.539271 | 4.2:+22109966 | MS.gene39443:intron |
| TCTGACTCAGGAGACGCCGC+TGG | 0.540398 | 4.2:-22106393 | None:intergenic |
| AGGTCTTGTCAACATGACTT+GGG | 0.546852 | 4.2:-22106339 | None:intergenic |
| GACCGAATCATCATCAAGAA+AGG | 0.546881 | 4.2:+22107300 | MS.gene39443:CDS |
| CAATGGCATTACAGCAGACC+AGG | 0.547595 | 4.2:+22109115 | MS.gene39443:CDS |
| AACACATATTTCTTTGCAAG+AGG | 0.556398 | 4.2:-22104920 | None:intergenic |
| CAGGAGAGAGGTGTTGATGC+AGG | 0.559845 | 4.2:+22106802 | MS.gene39443:intron |
| TGACTTGATATCATTCATGC+TGG | 0.561348 | 4.2:+22106825 | MS.gene39443:CDS |
| GCGGAATGGGTGCTTCCAGA+TGG | 0.565096 | 4.2:+22104986 | MS.gene39443:CDS |
| GCATTTGGTGGTCAAGTCTG+AGG | 0.565644 | 4.2:+22110046 | MS.gene39443:CDS |
| ATTATGACGAGTTTCCATCC+AGG | 0.565690 | 4.2:+22109868 | MS.gene39443:CDS |
| AATTACACTGTGAGATATTG+CGG | 0.567848 | 4.2:+22108701 | MS.gene39443:CDS |
| TTATGACGAGTTTCCATCCA+GGG | 0.567869 | 4.2:+22109869 | MS.gene39443:CDS |
| TTAGAAGGCATTGATTCCCT+CGG | 0.574898 | 4.2:-22106046 | None:intergenic |
| TCATCCTCGTGTTGCACAGA+GGG | 0.581937 | 4.2:+22109685 | MS.gene39443:CDS |
| AGTTTATCGAGTTTGATGGC+AGG | 0.583098 | 4.2:-22104518 | None:intergenic |
| TTGGCAATGATCCTAACCTC+AGG | 0.587350 | 4.2:-22104467 | None:intergenic |
| GGTGGTGACAGATTAGGTTG+TGG | 0.588257 | 4.2:+22109805 | MS.gene39443:intron |
| GCATATTGATGGACCTGTGC+CGG | 0.588398 | 4.2:+22104952 | MS.gene39443:CDS |
| AGCGGCGTCTCCTGAGTCAG+AGG | 0.589108 | 4.2:+22106395 | MS.gene39443:CDS |
| GTTGAAGTTTGACCAGCCCA+AGG | 0.597505 | 4.2:-22107085 | None:intergenic |
| CAAGAATTTCATGGACATGG+TGG | 0.599325 | 4.2:+22104487 | MS.gene39443:CDS |
| TGACCAGCCCAAGGTCTGCA+AGG | 0.612502 | 4.2:-22107076 | None:intergenic |
| CGAATCATCATCAAGAAAGG+AGG | 0.616443 | 4.2:+22107303 | MS.gene39443:CDS |
| ACATATTTCTTTGCAAGAGG+CGG | 0.617514 | 4.2:-22104917 | None:intergenic |
| ACACATTGACCGAATTTCAG+AGG | 0.620159 | 4.2:+22107039 | MS.gene39443:CDS |
| TGTGCCGGCTAAATTATTGG+CGG | 0.623227 | 4.2:+22104967 | MS.gene39443:CDS |
| TTATGCTCTGGAACAATGGG+AGG | 0.625310 | 4.2:+22106108 | MS.gene39443:CDS |
| TTAGAAAATCAAAATGCCTG+AGG | 0.628200 | 4.2:+22104451 | None:intergenic |
| GGAATATATCACTAATTCTG+AGG | 0.632294 | 4.2:+22106703 | MS.gene39443:CDS |
| TGGCAGTGGAACTTTGCCGA+GGG | 0.654665 | 4.2:+22106030 | MS.gene39443:intron |
| ATGGCAGTGGAACTTTGCCG+AGG | 0.657791 | 4.2:+22106029 | MS.gene39443:intron |
| ACAGCTTTGGTACATCATCA+GGG | 0.675051 | 4.2:+22106682 | MS.gene39443:CDS |
| CTCATCCTCGTGTTGCACAG+AGG | 0.680297 | 4.2:+22109684 | MS.gene39443:CDS |
| GGTACCCTCTGTGCAACACG+AGG | 0.694512 | 4.2:-22109689 | None:intergenic |
| TGCCTTCTAATATTACTGTG+AGG | 0.698083 | 4.2:+22106059 | MS.gene39443:CDS |
| GACTGCGCCAGAGAATGGAA+TGG | 0.724470 | 4.2:+22109996 | MS.gene39443:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAATTTATTACATTAG+CGG | + | chr4.2:22107918-22107937 | MS.gene39443:intron | 10.0% |
| !! | AAAAAGAAAGAAGAAATATA+AGG | - | chr4.2:22108114-22108133 | None:intergenic | 15.0% |
| !! | GAATAATATACATAATCAAA+AGG | - | chr4.2:22105500-22105519 | None:intergenic | 15.0% |
| !! | TATAAGTACAAGATAAATTA+AGG | - | chr4.2:22108892-22108911 | None:intergenic | 15.0% |
| !! | TTAAGTTAAAAACATCATTA+AGG | + | chr4.2:22109532-22109551 | MS.gene39443:intron | 15.0% |
| !!! | AATTTTCTTAAAAGTTTATG+AGG | + | chr4.2:22105440-22105459 | MS.gene39443:intron | 15.0% |
| !!! | CATTCTATTTAATTTTTTCA+GGG | + | chr4.2:22108628-22108647 | MS.gene39443:intron | 15.0% |
| !!! | TCATTCTATTTAATTTTTTC+AGG | + | chr4.2:22108627-22108646 | MS.gene39443:intron | 15.0% |
| !!! | TTATTTTGCTTTTTAAATTG+TGG | + | chr4.2:22109161-22109180 | MS.gene39443:intron | 15.0% |
| !! | AAAACAAATCAATTGTGAAA+CGG | - | chr4.2:22107337-22107356 | None:intergenic | 20.0% |
| !! | AATAAGATGAAAACAACTTA+TGG | + | chr4.2:22104714-22104733 | MS.gene39443:intron | 20.0% |
| !! | ACTGCTAATGTAAAAAATAT+AGG | - | chr4.2:22107953-22107972 | None:intergenic | 20.0% |
| !! | AGCAAAGAAAAAAAAAAGAA+TGG | - | chr4.2:22107618-22107637 | None:intergenic | 20.0% |
| !! | ATTAAATTGCAGTTACAAAA+GGG | - | chr4.2:22106967-22106986 | None:intergenic | 20.0% |
| !! | CTTACAAATCATAAAATGAT+AGG | + | chr4.2:22104888-22104907 | MS.gene39443:intron | 20.0% |
| !! | GCAAAGAAAAAAAAAAGAAT+GGG | - | chr4.2:22107617-22107636 | None:intergenic | 20.0% |
| !! | TATAATTTCTAATACTTACC+TGG | - | chr4.2:22109136-22109155 | None:intergenic | 20.0% |
| !! | TATATTATATGCCTAATCAT+TGG | - | chr4.2:22107018-22107037 | None:intergenic | 20.0% |
| !! | TGATAGAAATAGCTTAATTA+AGG | - | chr4.2:22104629-22104648 | None:intergenic | 20.0% |
| !! | TTCACCAAAATATTATTGTT+TGG | + | chr4.2:22108954-22108973 | MS.gene39443:intron | 20.0% |
| !!! | AAAAAGTTCTAAAACAAGAT+TGG | - | chr4.2:22107792-22107811 | None:intergenic | 20.0% |
| !!! | AAGACCAAACAATAATATTT+TGG | - | chr4.2:22108961-22108980 | None:intergenic | 20.0% |
| !!! | AATTTTGTTCATGTGTATAT+AGG | + | chr4.2:22108199-22108218 | MS.gene39443:intron | 20.0% |
| !!! | ATTTTGTTTCAAATGACAAT+TGG | + | chr4.2:22105185-22105204 | MS.gene39443:intron | 20.0% |
| !!! | CAATAATATTTTGGTGAAAT+AGG | - | chr4.2:22108952-22108971 | None:intergenic | 20.0% |
| !!! | CTTTTAAGAAAATTCAAGAA+CGG | - | chr4.2:22105434-22105453 | None:intergenic | 20.0% |
| !!! | CTTTTTTTCACAACTTTATA+GGG | + | chr4.2:22107220-22107239 | MS.gene39443:intron | 20.0% |
| !!! | TAATCTTTTTTGTTAGTAGA+TGG | + | chr4.2:22107745-22107764 | MS.gene39443:intron | 20.0% |
| !!! | TCTTTTTTTCACAACTTTAT+AGG | + | chr4.2:22107219-22107238 | MS.gene39443:intron | 20.0% |
| !!! | TGAAGATTTTATTCAAATGA+AGG | - | chr4.2:22109340-22109359 | None:intergenic | 20.0% |
| !!! | TTCATATGAATTTTGAATTC+AGG | - | chr4.2:22105914-22105933 | None:intergenic | 20.0% |
| !!! | TTTTCTGATATGTAGTATTA+TGG | + | chr4.2:22109784-22109803 | MS.gene39443:intron | 20.0% |
| !!! | TTTTGAGACAAATCATATAA+TGG | + | chr4.2:22104814-22104833 | MS.gene39443:intron | 20.0% |
| ! | AAAAGTGGAATCAAAAGAAA+AGG | - | chr4.2:22106141-22106160 | None:intergenic | 25.0% |
| ! | AACAAACCTATATAGACAAT+GGG | + | chr4.2:22105845-22105864 | MS.gene39443:intron | 25.0% |
| ! | AATATCTAATAGTGAGTAGT+TGG | + | chr4.2:22109013-22109032 | MS.gene39443:intron | 25.0% |
| ! | AGAAGAAAAATACTAAACTG+GGG | - | chr4.2:22105605-22105624 | None:intergenic | 25.0% |
| ! | AGAATGGAATGGTTTATTAT+GGG | + | chr4.2:22110007-22110026 | MS.gene39443:CDS | 25.0% |
| ! | ATCATGTCATCAAAATGAAA+AGG | + | chr4.2:22108144-22108163 | MS.gene39443:intron | 25.0% |
| ! | ATGTACCTTAATAGAAACAA+GGG | - | chr4.2:22105769-22105788 | None:intergenic | 25.0% |
| ! | ATTTCAGAGGAACATAATTA+AGG | + | chr4.2:22107052-22107071 | MS.gene39443:CDS | 25.0% |
| ! | CATTAAATTGCAGTTACAAA+AGG | - | chr4.2:22106968-22106987 | None:intergenic | 25.0% |
| ! | CATTTGAATAAAATCTTCAC+TGG | + | chr4.2:22109341-22109360 | MS.gene39443:intron | 25.0% |
| ! | CTTTAATATCTTTCTACCTT+AGG | + | chr4.2:22109456-22109475 | MS.gene39443:intron | 25.0% |
| ! | GAATTTCTATGTTTCTTTGT+TGG | - | chr4.2:22109493-22109512 | None:intergenic | 25.0% |
| ! | GAGAAGAAAAATACTAAACT+GGG | - | chr4.2:22105606-22105625 | None:intergenic | 25.0% |
| ! | TAACAAACCTATATAGACAA+TGG | + | chr4.2:22105844-22105863 | MS.gene39443:intron | 25.0% |
| ! | TATGTACCTTAATAGAAACA+AGG | - | chr4.2:22105770-22105789 | None:intergenic | 25.0% |
| ! | TGTACAAAGTAAACAAAAAG+TGG | - | chr4.2:22106156-22106175 | None:intergenic | 25.0% |
| ! | TGTAGAAAACTAATGTTTGT+CGG | + | chr4.2:22108403-22108422 | MS.gene39443:intron | 25.0% |
| ! | TGTTAGTAGATGGATAAAAA+AGG | + | chr4.2:22107755-22107774 | MS.gene39443:intron | 25.0% |
| ! | TTACAGTTATTGCATATTGA+TGG | + | chr4.2:22104941-22104960 | MS.gene39443:CDS | 25.0% |
| ! | TTTAATAGAAAGTTTAGACG+TGG | + | chr4.2:22107360-22107379 | MS.gene39443:intron | 25.0% |
| !! | AAACCACTTTCAGTTAATTT+TGG | - | chr4.2:22106552-22106571 | None:intergenic | 25.0% |
| !! | AACAAGTTTTTGTCACAAAA+AGG | - | chr4.2:22105275-22105294 | None:intergenic | 25.0% |
| !! | AATCAGTTTGAAGTAGTAAA+AGG | - | chr4.2:22108475-22108494 | None:intergenic | 25.0% |
| !! | ACTTGTATGTCTAAATCTTT+TGG | + | chr4.2:22109429-22109448 | MS.gene39443:intron | 25.0% |
| !! | ATATGGTTTAGATGATCTTT+TGG | + | chr4.2:22108239-22108258 | MS.gene39443:intron | 25.0% |
| !! | CTGCTACTTATAAGTTATAA+AGG | - | chr4.2:22109272-22109291 | None:intergenic | 25.0% |
| !! | TAAGGTGTTTAATGAAAACA+TGG | - | chr4.2:22104611-22104630 | None:intergenic | 25.0% |
| !! | TATGGTTTAGATGATCTTTT+GGG | + | chr4.2:22108240-22108259 | MS.gene39443:intron | 25.0% |
| !! | TTCAAATTTGACTTCTGTAA+AGG | + | chr4.2:22109243-22109262 | MS.gene39443:intron | 25.0% |
| !! | TTCAGAAACTTTTAGTACAT+GGG | + | chr4.2:22105683-22105702 | MS.gene39443:CDS | 25.0% |
| !! | TTGTATAATGCTTTTGACAA+TGG | + | chr4.2:22109098-22109117 | MS.gene39443:CDS | 25.0% |
| !!! | AAACTGGAAGTTGTTTTTTA+TGG | + | chr4.2:22108848-22108867 | MS.gene39443:intron | 25.0% |
| !!! | AAGAGTTTTAGCAAAAAATC+AGG | - | chr4.2:22105339-22105358 | None:intergenic | 25.0% |
| !!! | AATTATGTTCCTCTGAAATT+CGG | - | chr4.2:22107051-22107070 | None:intergenic | 25.0% |
| !!! | ACAGCATTTTGATAATTTCA+TGG | - | chr4.2:22105879-22105898 | None:intergenic | 25.0% |
| !!! | AGATTTGTTGCTAATTTTGT+TGG | - | chr4.2:22107268-22107287 | None:intergenic | 25.0% |
| !!! | TATTCACTTTTCTCCTATTA+AGG | + | chr4.2:22104585-22104604 | MS.gene39443:intron | 25.0% |
| !!! | TTTTTTTCCTTCCAATGATT+AGG | + | chr4.2:22107004-22107023 | MS.gene39443:intron | 25.0% |
| AACACATATTTCTTTGCAAG+AGG | - | chr4.2:22104923-22104942 | None:intergenic | 30.0% | |
| AATCAAAAAAGCCATAACAG+GGG | - | chr4.2:22109933-22109952 | None:intergenic | 30.0% | |
| AATTACACTGTGAGATATTG+CGG | + | chr4.2:22108701-22108720 | MS.gene39443:CDS | 30.0% | |
| AGATTCAAAGAAGATGCATT+TGG | + | chr4.2:22110031-22110050 | MS.gene39443:CDS | 30.0% | |
| ATAACATGTCAATCGTTCAT+TGG | + | chr4.2:22108500-22108519 | MS.gene39443:intron | 30.0% | |
| ATAGCTCCAACAATAAGATT+TGG | - | chr4.2:22109065-22109084 | None:intergenic | 30.0% | |
| ATATGTATGGAAGTTTCTGT+TGG | + | chr4.2:22108338-22108357 | MS.gene39443:intron | 30.0% | |
| ATTTATTACATTAGCGGTGT+TGG | + | chr4.2:22107924-22107943 | MS.gene39443:intron | 30.0% | |
| ATTTGATGCATACCAAAAAC+TGG | - | chr4.2:22106575-22106594 | None:intergenic | 30.0% | |
| CAACTTCCAAATCTTATTGT+TGG | + | chr4.2:22109056-22109075 | MS.gene39443:CDS | 30.0% | |
| CAATTGAACCAATCTATCAA+TGG | - | chr4.2:22105032-22105051 | None:intergenic | 30.0% | |
| CATAAAATCGTTAATACGAG+TGG | + | chr4.2:22105786-22105805 | MS.gene39443:intron | 30.0% | |
| CTTAAAAGTTTATGAGGAAC+AGG | + | chr4.2:22105446-22105465 | MS.gene39443:intron | 30.0% | |
| GAATCAAAAAAGCCATAACA+GGG | - | chr4.2:22109934-22109953 | None:intergenic | 30.0% | |
| GAGAATGGAATGGTTTATTA+TGG | + | chr4.2:22110006-22110025 | MS.gene39443:CDS | 30.0% | |
| GGAATATATCACTAATTCTG+AGG | + | chr4.2:22106703-22106722 | MS.gene39443:CDS | 30.0% | |
| GGAGAAGAAAAATACTAAAC+TGG | - | chr4.2:22105607-22105626 | None:intergenic | 30.0% | |
| GTTGGAAAAATGATAACCTA+AGG | - | chr4.2:22109475-22109494 | None:intergenic | 30.0% | |
| TAAAATCTTCACTGGTGAAT+TGG | + | chr4.2:22109349-22109368 | MS.gene39443:intron | 30.0% | |
| TAAAGAAGAGCTTATGTTGA+AGG | - | chr4.2:22106362-22106381 | None:intergenic | 30.0% | |
| TAATAAACCATTCCATTCTC+TGG | - | chr4.2:22110006-22110025 | None:intergenic | 30.0% | |
| TCATTGCAGAAAATATTTCG+CGG | - | chr4.2:22108743-22108762 | None:intergenic | 30.0% | |
| TCTGATATGTAGTATTATGG+TGG | + | chr4.2:22109787-22109806 | MS.gene39443:intron | 30.0% | |
| TGCATTACATTAAGTTCAAG+TGG | - | chr4.2:22106608-22106627 | None:intergenic | 30.0% | |
| TTAACTCGTAATACGTGATA+TGG | - | chr4.2:22105827-22105846 | None:intergenic | 30.0% | |
| TTACCACAAAACAAAGTCAT+TGG | - | chr4.2:22106291-22106310 | None:intergenic | 30.0% | |
| TTAGACATACAAGTATATCG+TGG | - | chr4.2:22109423-22109442 | None:intergenic | 30.0% | |
| TTATATGCCTAATCATTGGA+AGG | - | chr4.2:22107014-22107033 | None:intergenic | 30.0% | |
| TTCAAATGAAGGATTGAAGT+CGG | - | chr4.2:22109329-22109348 | None:intergenic | 30.0% | |
| TTGTTATGAATTACAGCTGA+TGG | + | chr4.2:22106649-22106668 | MS.gene39443:intron | 30.0% | |
| ! | AATGAAAACATGGCCTTAAT+AGG | - | chr4.2:22104601-22104620 | None:intergenic | 30.0% |
| ! | ATGGTTTAGATGATCTTTTG+GGG | + | chr4.2:22108241-22108260 | MS.gene39443:intron | 30.0% |
| ! | CTTCAGAAACTTTTAGTACA+TGG | + | chr4.2:22105682-22105701 | MS.gene39443:CDS | 30.0% |
| ! | CTTTAATGAAAGTTTTCCAG+CGG | + | chr4.2:22106377-22106396 | MS.gene39443:CDS | 30.0% |
| ! | GTTTTCTACAAGTTGTAGTA+TGG | - | chr4.2:22108393-22108412 | None:intergenic | 30.0% |
| ! | TCAATTTGAGACTTGATATG+TGG | + | chr4.2:22109300-22109319 | MS.gene39443:intron | 30.0% |
| ! | TTGTCTTCTTTTTCTGTTCA+TGG | + | chr4.2:22105722-22105741 | MS.gene39443:intron | 30.0% |
| !! | AAGCTTTAGAGCTGAATTAA+TGG | - | chr4.2:22108922-22108941 | None:intergenic | 30.0% |
| !! | AGATATTGCGGTTATTTTCA+AGG | + | chr4.2:22108713-22108732 | MS.gene39443:CDS | 30.0% |
| !! | AGCTTAGTTTTCATGTCATT+GGG | + | chr4.2:22106848-22106867 | MS.gene39443:CDS | 30.0% |
| !! | ATGTTCCCTTGTTTCTATTA+AGG | + | chr4.2:22105761-22105780 | MS.gene39443:intron | 30.0% |
| !!! | CTTGTTTTATTTGTTGCATG+TGG | + | chr4.2:22105289-22105308 | MS.gene39443:intron | 30.0% |
| AAACCTATATAGACAATGGG+TGG | + | chr4.2:22105848-22105867 | MS.gene39443:intron | 35.0% | |
| AACAAAGTCATTGGAGGTTT+AGG | - | chr4.2:22106282-22106301 | None:intergenic | 35.0% | |
| AAGCAATGTTGATCAATGAG+GGG | + | chr4.2:22107690-22107709 | MS.gene39443:intron | 35.0% | |
| AATCACGTTATAGCATGACA+CGG | + | chr4.2:22105407-22105426 | MS.gene39443:intron | 35.0% | |
| ACAGAGACAGATAACTGTTA+CGG | - | chr4.2:22106732-22106751 | None:intergenic | 35.0% | |
| ACATATTTCTTTGCAAGAGG+CGG | - | chr4.2:22104920-22104939 | None:intergenic | 35.0% | |
| ACTAAACTGGGGTAAAACAA+GGG | - | chr4.2:22105594-22105613 | None:intergenic | 35.0% | |
| ACTTGAATGTTTGCTTTAGC+TGG | + | chr4.2:22105984-22106003 | MS.gene39443:intron | 35.0% | |
| AGATGCAGAATGATTTAACG+TGG | + | chr4.2:22107156-22107175 | MS.gene39443:intron | 35.0% | |
| AGCCTCACAGTAATATTAGA+AGG | - | chr4.2:22106064-22106083 | None:intergenic | 35.0% | |
| AGGAAGTTCCAAAACCAAAA+GGG | - | chr4.2:22108818-22108837 | None:intergenic | 35.0% | |
| AGTCAGAGGTTCTGTTTATT+TGG | + | chr4.2:22106409-22106428 | MS.gene39443:intron | 35.0% | |
| AGTTTCTGTTGGACATTATC+AGG | + | chr4.2:22108349-22108368 | MS.gene39443:intron | 35.0% | |
| ATAGAAACAAGGGAACATGA+TGG | - | chr4.2:22105759-22105778 | None:intergenic | 35.0% | |
| ATATGTAGAAGACAGTGAAC+AGG | - | chr4.2:22108091-22108110 | None:intergenic | 35.0% | |
| CAATGTTGCCATTGATAGAT+TGG | + | chr4.2:22105021-22105040 | MS.gene39443:CDS | 35.0% | |
| CAGGATTTGATGTCACAATT+TGG | + | chr4.2:22105465-22105484 | MS.gene39443:intron | 35.0% | |
| CTACTTAAGCAAGTACTTGT+GGG | - | chr4.2:22104757-22104776 | None:intergenic | 35.0% | |
| CTTCCAGTTTCAATTTCCAT+AGG | - | chr4.2:22108838-22108857 | None:intergenic | 35.0% | |
| CTTCCTATGGAAATTGAAAC+TGG | + | chr4.2:22108832-22108851 | MS.gene39443:intron | 35.0% | |
| GAACATGAGAAAAGACTAGA+GGG | - | chr4.2:22108790-22108809 | None:intergenic | 35.0% | |
| GAAGCAATGTTGATCAATGA+GGG | + | chr4.2:22107689-22107708 | MS.gene39443:intron | 35.0% | |
| GATCATTGCCAAGAATTTCA+TGG | + | chr4.2:22104478-22104497 | MS.gene39443:CDS | 35.0% | |
| GCTCCAAAATTAACTGAAAG+TGG | + | chr4.2:22106546-22106565 | MS.gene39443:CDS | 35.0% | |
| GGAATCAAAAAAGCCATAAC+AGG | - | chr4.2:22109935-22109954 | None:intergenic | 35.0% | |
| GTAGAGTTTATCGAGTTTGA+TGG | - | chr4.2:22104525-22104544 | None:intergenic | 35.0% | |
| GTGTTGTATGAGTATCATAC+AGG | - | chr4.2:22107570-22107589 | None:intergenic | 35.0% | |
| TAACCACCCATTGTCTATAT+AGG | - | chr4.2:22105854-22105873 | None:intergenic | 35.0% | |
| TAAGTTGCAACAAGAAACAC+TGG | - | chr4.2:22106315-22106334 | None:intergenic | 35.0% | |
| TACTAAACTGGGGTAAAACA+AGG | - | chr4.2:22105595-22105614 | None:intergenic | 35.0% | |
| TAGAAACAAGGGAACATGAT+GGG | - | chr4.2:22105758-22105777 | None:intergenic | 35.0% | |
| TAGGAAGTTCCAAAACCAAA+AGG | - | chr4.2:22108819-22108838 | None:intergenic | 35.0% | |
| TATGAGTATCATACAGGTGT+CGG | - | chr4.2:22107564-22107583 | None:intergenic | 35.0% | |
| TATGTAGAAGACAGTGAACA+GGG | - | chr4.2:22108090-22108109 | None:intergenic | 35.0% | |
| TCGTAATACGTGATATGGAA+GGG | - | chr4.2:22105822-22105841 | None:intergenic | 35.0% | |
| TCTACAAGTTGTAGTATGGA+AGG | - | chr4.2:22108389-22108408 | None:intergenic | 35.0% | |
| TCTACGAGATTAAAGATGTG+TGG | + | chr4.2:22107667-22107686 | MS.gene39443:intron | 35.0% | |
| TCTACTTAAGCAAGTACTTG+TGG | - | chr4.2:22104758-22104777 | None:intergenic | 35.0% | |
| TCTCAAGATCCTCTAATGTT+GGG | - | chr4.2:22106087-22106106 | None:intergenic | 35.0% | |
| TCTGCATGTGATTTCGTTTA+GGG | + | chr4.2:22107390-22107409 | MS.gene39443:intron | 35.0% | |
| TGAACGATTGACATGTTATG+AGG | - | chr4.2:22108499-22108518 | None:intergenic | 35.0% | |
| TGACTTGATATCATTCATGC+TGG | + | chr4.2:22106825-22106844 | MS.gene39443:CDS | 35.0% | |
| TGAGTAGTTGGATATATGCA+GGG | + | chr4.2:22109025-22109044 | MS.gene39443:intron | 35.0% | |
| TGCAGATAGTCAGTTTCTTT+CGG | + | chr4.2:22109654-22109673 | MS.gene39443:intron | 35.0% | |
| TGCCTTCTAATATTACTGTG+AGG | + | chr4.2:22106059-22106078 | MS.gene39443:CDS | 35.0% | |
| TTCAAAGAAGATGCATTTGG+TGG | + | chr4.2:22110034-22110053 | MS.gene39443:CDS | 35.0% | |
| TTCTGCATGTGATTTCGTTT+AGG | + | chr4.2:22107389-22107408 | MS.gene39443:intron | 35.0% | |
| ! | AGACAATTTAGCCTCTGAAA+TGG | + | chr4.2:22105149-22105168 | MS.gene39443:intron | 35.0% |
| ! | CTGTTTTGCTTGCATATGTA+TGG | + | chr4.2:22108325-22108344 | MS.gene39443:intron | 35.0% |
| ! | GATTCCTTATGTCATTTGTG+TGG | + | chr4.2:22109949-22109968 | MS.gene39443:intron | 35.0% |
| ! | TATTATGGTGGTGACAGATT+AGG | + | chr4.2:22109799-22109818 | MS.gene39443:intron | 35.0% |
| ! | TGAAAGTGGTTTCCAGTTTT+TGG | + | chr4.2:22106560-22106579 | MS.gene39443:CDS | 35.0% |
| ! | TGGTTTAGATGATCTTTTGG+GGG | + | chr4.2:22108242-22108261 | MS.gene39443:intron | 35.0% |
| ! | TTTTCACAACTTTATAGGGC+AGG | + | chr4.2:22107224-22107243 | MS.gene39443:intron | 35.0% |
| !! | CTCCTTTCTTGATGATGATT+CGG | - | chr4.2:22107305-22107324 | None:intergenic | 35.0% |
| !! | GAGCTTAGTTTTCATGTCAT+TGG | + | chr4.2:22106847-22106866 | MS.gene39443:CDS | 35.0% |
| !! | GCTTAGTTTTCATGTCATTG+GGG | + | chr4.2:22106849-22106868 | MS.gene39443:CDS | 35.0% |
| !! | TATGTTTTGAACATGCTTCG+TGG | + | chr4.2:22104857-22104876 | MS.gene39443:intron | 35.0% |
| !!! | TTGTGTTTTGATAGTCCATC+TGG | - | chr4.2:22105004-22105023 | None:intergenic | 35.0% |
| !!! | TTTGGTTTTGGAACTTCCTA+TGG | + | chr4.2:22108819-22108838 | MS.gene39443:intron | 35.0% |
| !!! | TTTTCAGGGATTTGTTGTTG+TGG | + | chr4.2:22108642-22108661 | MS.gene39443:intron | 35.0% |
| AACTCCTTAGCTATGAAGCA+CGG | + | chr4.2:22107414-22107433 | MS.gene39443:intron | 40.0% | |
| AAGTATATCGTGGTTCTCGA+AGG | - | chr4.2:22109413-22109432 | None:intergenic | 40.0% | |
| ACACATTGACCGAATTTCAG+AGG | + | chr4.2:22107039-22107058 | MS.gene39443:CDS | 40.0% | |
| ACCAGTTTGAACCATTTCAG+AGG | - | chr4.2:22105163-22105182 | None:intergenic | 40.0% | |
| AGAATCAAAGTTGCTTACCC+TGG | - | chr4.2:22109889-22109908 | None:intergenic | 40.0% | |
| AGCAATGTTGATCAATGAGG+GGG | + | chr4.2:22107691-22107710 | MS.gene39443:intron | 40.0% | |
| AGGTCCTTCAACACATTACA+AGG | - | chr4.2:22105255-22105274 | None:intergenic | 40.0% | |
| AGTTCCAAAACCAAAAGGGA+AGG | - | chr4.2:22108814-22108833 | None:intergenic | 40.0% | |
| ATAAACAGAACCTCTGACTC+AGG | - | chr4.2:22106408-22106427 | None:intergenic | 40.0% | |
| ATAGCTCCTTAGACATGCTA+AGG | + | chr4.2:22108010-22108029 | MS.gene39443:intron | 40.0% | |
| ATTATGACGAGTTTCCATCC+AGG | + | chr4.2:22109868-22109887 | MS.gene39443:CDS | 40.0% | |
| CAAGAATTTCATGGACATGG+TGG | + | chr4.2:22104487-22104506 | MS.gene39443:CDS | 40.0% | |
| CACCATGTCCATGAAATTCT+TGG | - | chr4.2:22104489-22104508 | None:intergenic | 40.0% | |
| CACGTCCTTGTGGTTAAATA+TGG | + | chr4.2:22106010-22106029 | MS.gene39443:intron | 40.0% | |
| CACTGCCATATTTAACCACA+AGG | - | chr4.2:22106018-22106037 | None:intergenic | 40.0% | |
| CATTCCGCCAATAATTTAGC+CGG | - | chr4.2:22104974-22104993 | None:intergenic | 40.0% | |
| CCACAAAACAAAGTCATTGG+AGG | - | chr4.2:22106288-22106307 | None:intergenic | 40.0% | |
| CCATAGTATAGGCTAGCATT+TGG | - | chr4.2:22105211-22105230 | None:intergenic | 40.0% | |
| CGAAATCACATGCAGAAACA+AGG | - | chr4.2:22107386-22107405 | None:intergenic | 40.0% | |
| CGAATCATCATCAAGAAAGG+AGG | + | chr4.2:22107303-22107322 | MS.gene39443:CDS | 40.0% | |
| CTAGCCTATACTATGGAGTT+TGG | + | chr4.2:22105215-22105234 | MS.gene39443:intron | 40.0% | |
| CTCGTAATACGTGATATGGA+AGG | - | chr4.2:22105823-22105842 | None:intergenic | 40.0% | |
| CTTGTGGTTAAATATGGCAG+TGG | + | chr4.2:22106016-22106035 | MS.gene39443:intron | 40.0% | |
| GACCGAATCATCATCAAGAA+AGG | + | chr4.2:22107300-22107319 | MS.gene39443:CDS | 40.0% | |
| GATACTCATACAACACGTGT+TGG | + | chr4.2:22107574-22107593 | MS.gene39443:intron | 40.0% | |
| GATATGTCTTATATGTGCCG+AGG | - | chr4.2:22107649-22107668 | None:intergenic | 40.0% | |
| GGAACATGAGAAAAGACTAG+AGG | - | chr4.2:22108791-22108810 | None:intergenic | 40.0% | |
| GGAAGCAATGTTGATCAATG+AGG | + | chr4.2:22107688-22107707 | MS.gene39443:intron | 40.0% | |
| GGCTAAATTATTGGCGGAAT+GGG | + | chr4.2:22104973-22104992 | MS.gene39443:CDS | 40.0% | |
| GTCTCAAGATCCTCTAATGT+TGG | - | chr4.2:22106088-22106107 | None:intergenic | 40.0% | |
| GTCTTAAGTATCCCCTGTTA+TGG | + | chr4.2:22109919-22109938 | MS.gene39443:intron | 40.0% | |
| GTGAGTAGTTGGATATATGC+AGG | + | chr4.2:22109024-22109043 | MS.gene39443:intron | 40.0% | |
| GTGTCCAAACTCCATAGTAT+AGG | - | chr4.2:22105222-22105241 | None:intergenic | 40.0% | |
| GTTCCAAAACCAAAAGGGAA+GGG | - | chr4.2:22108813-22108832 | None:intergenic | 40.0% | |
| TAGCTCCTTAGACATGCTAA+GGG | + | chr4.2:22108011-22108030 | MS.gene39443:intron | 40.0% | |
| TATAGGGCAGGAAAGAAAGT+TGG | + | chr4.2:22107236-22107255 | MS.gene39443:intron | 40.0% | |
| TGAACAAAGACACACAGATG+TGG | - | chr4.2:22105524-22105543 | None:intergenic | 40.0% | |
| TGCACCTTGTAATGTGTTGA+AGG | + | chr4.2:22105248-22105267 | MS.gene39443:intron | 40.0% | |
| TGCCAAGAATTTCATGGACA+TGG | + | chr4.2:22104484-22104503 | MS.gene39443:CDS | 40.0% | |
| TGGATACAAATGCACAGCTT+TGG | + | chr4.2:22106669-22106688 | MS.gene39443:CDS | 40.0% | |
| TGTTGGACATTATCAGGTTC+TGG | + | chr4.2:22108355-22108374 | MS.gene39443:intron | 40.0% | |
| TTAGCATGTCTAAGGAGCTA+TGG | - | chr4.2:22108011-22108030 | None:intergenic | 40.0% | |
| TTATGACGAGTTTCCATCCA+GGG | + | chr4.2:22109869-22109888 | MS.gene39443:CDS | 40.0% | |
| TTCCAAAACCAAAAGGGAAG+GGG | - | chr4.2:22108812-22108831 | None:intergenic | 40.0% | |
| TTGAAGCTCTTGACAATGAC+AGG | + | chr4.2:22105062-22105081 | MS.gene39443:CDS | 40.0% | |
| ! | AAGGTCTTGTCAACATGACT+TGG | - | chr4.2:22106343-22106362 | None:intergenic | 40.0% |
| ! | ACAGCTTTGGTACATCATCA+GGG | + | chr4.2:22106682-22106701 | MS.gene39443:CDS | 40.0% |
| ! | ACCTGATCTGTGACATTTTC+AGG | - | chr4.2:22109722-22109741 | None:intergenic | 40.0% |
| ! | AGGTCTTGTCAACATGACTT+GGG | - | chr4.2:22106342-22106361 | None:intergenic | 40.0% |
| ! | AGTTTATCGAGTTTGATGGC+AGG | - | chr4.2:22104521-22104540 | None:intergenic | 40.0% |
| ! | CCAAATGCTAGCCTATACTA+TGG | + | chr4.2:22105208-22105227 | MS.gene39443:intron | 40.0% |
| ! | GGTTTAGATGATCTTTTGGG+GGG | + | chr4.2:22108243-22108262 | MS.gene39443:intron | 40.0% |
| ! | TAGTTTTCATGTCATTGGGG+AGG | + | chr4.2:22106852-22106871 | MS.gene39443:CDS | 40.0% |
| ! | TGCTCTTCATCGTCTACTTT+TGG | + | chr4.2:22106777-22106796 | MS.gene39443:intron | 40.0% |
| !! | AGACTTATGCTCTGGAACAA+TGG | + | chr4.2:22106104-22106123 | MS.gene39443:CDS | 40.0% |
| !! | GACTTATGCTCTGGAACAAT+GGG | + | chr4.2:22106105-22106124 | MS.gene39443:CDS | 40.0% |
| !! | TTAGAAGGCATTGATTCCCT+CGG | - | chr4.2:22106049-22106068 | None:intergenic | 40.0% |
| !!! | CCTCCAATGACTTTGTTTTG+TGG | + | chr4.2:22106285-22106304 | MS.gene39443:intron | 40.0% |
| !!! | TTTTTTACGCCGCCAAAAGT+AGG | + | chr4.2:22110088-22110107 | MS.gene39443:CDS | 40.0% |
| ACAACACGTGTTGGACAACT+CGG | + | chr4.2:22107583-22107602 | MS.gene39443:intron | 45.0% | |
| ACAAGGGTCGAGAGTGATAA+TGG | - | chr4.2:22105578-22105597 | None:intergenic | 45.0% | |
| AGGGGAACTCTCTATACTGT+TGG | + | chr4.2:22108266-22108285 | MS.gene39443:intron | 45.0% | |
| ATTAAGGACCTTGCAGACCT+TGG | + | chr4.2:22107068-22107087 | MS.gene39443:CDS | 45.0% | |
| ATTGTGGTACTCGCTGTAGA+TGG | + | chr4.2:22109177-22109196 | MS.gene39443:intron | 45.0% | |
| CATGACACGCCTAATCCTTT+AGG | - | chr4.2:22107443-22107462 | None:intergenic | 45.0% | |
| CATGTCAATCGTTCATTGGC+TGG | + | chr4.2:22108504-22108523 | MS.gene39443:intron | 45.0% | |
| CCTGCCACACAAATGACATA+AGG | - | chr4.2:22109956-22109975 | None:intergenic | 45.0% | |
| CGGCTAAATTATTGGCGGAA+TGG | + | chr4.2:22104972-22104991 | MS.gene39443:CDS | 45.0% | |
| CTAAAGGATTAGGCGTGTCA+TGG | + | chr4.2:22107441-22107460 | MS.gene39443:intron | 45.0% | |
| CTGGTCAAACTTCAACAGGT+TGG | + | chr4.2:22107092-22107111 | MS.gene39443:intron | 45.0% | |
| GAGCTTCTCTGTCTCTGTAT+CGG | - | chr4.2:22106530-22106549 | None:intergenic | 45.0% | |
| GCAATGTTGATCAATGAGGG+GGG | + | chr4.2:22107692-22107711 | MS.gene39443:intron | 45.0% | |
| GCCTGAAAATGTCACAGATC+AGG | + | chr4.2:22109718-22109737 | MS.gene39443:CDS | 45.0% | |
| GGATCTTGAGACTTATGCTC+TGG | + | chr4.2:22106096-22106115 | MS.gene39443:CDS | 45.0% | |
| GTGTGGCAGGATGTATTTGA+AGG | + | chr4.2:22109966-22109985 | MS.gene39443:intron | 45.0% | |
| TATGAAGCACGGACACCTAA+AGG | + | chr4.2:22107425-22107444 | MS.gene39443:intron | 45.0% | |
| TCAAAGTTGCTTACCCTGGA+TGG | - | chr4.2:22109885-22109904 | None:intergenic | 45.0% | |
| TCATCTGCGAAGCTATTCTC+AGG | + | chr4.2:22104555-22104574 | MS.gene39443:CDS | 45.0% | |
| TCTCCTTCTTGCAGCAAGAT+CGG | + | chr4.2:22105622-22105641 | MS.gene39443:intron | 45.0% | |
| TGTGCAACAGATTCTCAGCA+AGG | - | chr4.2:22106893-22106912 | None:intergenic | 45.0% | |
| TTAAGGACCTTGCAGACCTT+GGG | + | chr4.2:22107069-22107088 | MS.gene39443:CDS | 45.0% | |
| TTCTTTGCTTCGACACACCT+CGG | + | chr4.2:22107629-22107648 | MS.gene39443:intron | 45.0% | |
| TTCTTTGCTTCGACACTCCT+TGG | + | chr4.2:22107530-22107549 | MS.gene39443:intron | 45.0% | |
| TTGGCAATGATCCTAACCTC+AGG | - | chr4.2:22104470-22104489 | None:intergenic | 45.0% | |
| TTTCCGATCTTGCTGCAAGA+AGG | - | chr4.2:22105628-22105647 | None:intergenic | 45.0% | |
| ! | CACAGCTTTGGTACATCATC+AGG | + | chr4.2:22106681-22106700 | MS.gene39443:CDS | 45.0% |
| ! | CCTTATGTCATTTGTGTGGC+AGG | + | chr4.2:22109953-22109972 | MS.gene39443:intron | 45.0% |
| ! | GTGGTGACAGATTAGGTTGT+GGG | + | chr4.2:22109806-22109825 | MS.gene39443:intron | 45.0% |
| !! | ACCTGTGCCGGCTAAATTAT+TGG | + | chr4.2:22104964-22104983 | MS.gene39443:CDS | 45.0% |
| !! | GCCTCTGAAATGGTTCAAAC+TGG | + | chr4.2:22105159-22105178 | MS.gene39443:intron | 45.0% |
| !! | TAGATGATCTTTTGGGGGGA+GGG | + | chr4.2:22108247-22108266 | MS.gene39443:intron | 45.0% |
| !! | TCATCGTCTACTTTTGGTGC+AGG | + | chr4.2:22106783-22106802 | MS.gene39443:intron | 45.0% |
| !! | TGTGCCGGCTAAATTATTGG+CGG | + | chr4.2:22104967-22104986 | MS.gene39443:CDS | 45.0% |
| !! | TTAGATGATCTTTTGGGGGG+AGG | + | chr4.2:22108246-22108265 | MS.gene39443:intron | 45.0% |
| !! | TTATGCTCTGGAACAATGGG+AGG | + | chr4.2:22106108-22106127 | MS.gene39443:CDS | 45.0% |
| !!! | TTCCCCTTCCCTTTTGGTTT+TGG | + | chr4.2:22108807-22108826 | MS.gene39443:intron | 45.0% |
| !! | AGTATATATTTAATTATATA+TGG | + | chr4.2:22108222-22108241 | MS.gene39443:intron | 5.0% |
| !!! | TAATTTTTATTTTTTTGAAT+GGG | + | chr4.2:22109581-22109600 | MS.gene39443:intron | 5.0% |
| !!! | TTAATTTTTATTTTTTTGAA+TGG | + | chr4.2:22109580-22109599 | MS.gene39443:intron | 5.0% |
| AGAAGACAGTGAACAGGGCA+CGG | - | chr4.2:22108085-22108104 | None:intergenic | 50.0% | |
| CAATGGCATTACAGCAGACC+AGG | + | chr4.2:22109115-22109134 | MS.gene39443:CDS | 50.0% | |
| CGACGTCTTAGTGTCGTGTT+AGG | + | chr4.2:22107975-22107994 | MS.gene39443:intron | 50.0% | |
| CTCCACCCTTAGCATGTCTA+AGG | - | chr4.2:22108019-22108038 | None:intergenic | 50.0% | |
| CTCCTTAGACATGCTAAGGG+TGG | + | chr4.2:22108014-22108033 | MS.gene39443:intron | 50.0% | |
| CTTAGACATGCTAAGGGTGG+AGG | + | chr4.2:22108017-22108036 | MS.gene39443:intron | 50.0% | |
| GACACTCGTACGACAAGTGT+CGG | + | chr4.2:22107469-22107488 | MS.gene39443:intron | 50.0% | |
| GACACTTGTCGTACGAGTGT+CGG | - | chr4.2:22107470-22107489 | None:intergenic | 50.0% | |
| GCACGGACACCTAAAGGATT+AGG | + | chr4.2:22107431-22107450 | MS.gene39443:intron | 50.0% | |
| GCCAATAATTTAGCCGGCAC+AGG | - | chr4.2:22104968-22104987 | None:intergenic | 50.0% | |
| GTGTCCGTGCTTCATAGCTA+AGG | - | chr4.2:22107421-22107440 | None:intergenic | 50.0% | |
| GTTGAAGTTTGACCAGCCCA+AGG | - | chr4.2:22107088-22107107 | None:intergenic | 50.0% | |
| TAGCTGGTAACACGTCCTTG+TGG | + | chr4.2:22106000-22106019 | MS.gene39443:intron | 50.0% | |
| TCATCCTCGTGTTGCACAGA+GGG | + | chr4.2:22109685-22109704 | MS.gene39443:CDS | 50.0% | |
| TGCTTCGACACTCCTTGGAT+CGG | + | chr4.2:22107535-22107554 | MS.gene39443:intron | 50.0% | |
| TGTGAGGCTCCCAACATTAG+AGG | + | chr4.2:22106075-22106094 | MS.gene39443:CDS | 50.0% | |
| ! | AGTGTCGGACAAACTCAGAC+TGG | + | chr4.2:22107484-22107503 | MS.gene39443:intron | 50.0% |
| ! | CTCATGTTCCCCTTCCCTTT+TGG | + | chr4.2:22108801-22108820 | MS.gene39443:intron | 50.0% |
| ! | GCATATTGATGGACCTGTGC+CGG | + | chr4.2:22104952-22104971 | MS.gene39443:CDS | 50.0% |
| ! | GCATTTGGTGGTCAAGTCTG+AGG | + | chr4.2:22110046-22110065 | MS.gene39443:CDS | 50.0% |
| ! | GGTGGTGACAGATTAGGTTG+TGG | + | chr4.2:22109805-22109824 | MS.gene39443:intron | 50.0% |
| !! | AGATGATCTTTTGGGGGGAG+GGG | + | chr4.2:22108248-22108267 | MS.gene39443:intron | 50.0% |
| !! | CGTTCATTGGCTGGCTTTAG+TGG | + | chr4.2:22108513-22108532 | MS.gene39443:intron | 50.0% |
| !! | CTACTTTTGGTGCAGGAGAG+AGG | + | chr4.2:22106790-22106809 | MS.gene39443:intron | 50.0% |
| !! | GTGACATTTTCAGGCACTGC+TGG | - | chr4.2:22109713-22109732 | None:intergenic | 50.0% |
| !! | TGGGCTGGTCAAACTTCAAC+AGG | + | chr4.2:22107088-22107107 | MS.gene39443:CDS | 50.0% |
| ATGGCAGTGGAACTTTGCCG+AGG | + | chr4.2:22106029-22106048 | MS.gene39443:intron | 55.0% | |
| CTCATCCTCGTGTTGCACAG+AGG | + | chr4.2:22109684-22109703 | MS.gene39443:CDS | 55.0% | |
| GACTGCGCCAGAGAATGGAA+TGG | + | chr4.2:22109996-22110015 | MS.gene39443:CDS | 55.0% | |
| TGGCAGTGGAACTTTGCCGA+GGG | + | chr4.2:22106030-22106049 | MS.gene39443:intron | 55.0% | |
| !! | CAGGAGAGAGGTGTTGATGC+AGG | + | chr4.2:22106802-22106821 | MS.gene39443:intron | 55.0% |
| CGTGTGACTGCGCCAGAGAA+TGG | + | chr4.2:22109991-22110010 | MS.gene39443:CDS | 60.0% | |
| GCGGAATGGGTGCTTCCAGA+TGG | + | chr4.2:22104986-22105005 | MS.gene39443:CDS | 60.0% | |
| GGTACCCTCTGTGCAACACG+AGG | - | chr4.2:22109692-22109711 | None:intergenic | 60.0% | |
| TGACCAGCCCAAGGTCTGCA+AGG | - | chr4.2:22107079-22107098 | None:intergenic | 60.0% | |
| !! | AGGTGTCGGACACCGATCCA+AGG | - | chr4.2:22107550-22107569 | None:intergenic | 60.0% |
| AGCGGCGTCTCCTGAGTCAG+AGG | + | chr4.2:22106395-22106414 | MS.gene39443:CDS | 65.0% | |
| GGACCTTGCAGACCTTGGGC+TGG | + | chr4.2:22107073-22107092 | MS.gene39443:CDS | 65.0% | |
| TCTGACTCAGGAGACGCCGC+TGG | - | chr4.2:22106396-22106415 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 22104464 | 22110109 | 22104464 | ID=MS.gene39443 |
| chr4.2 | mRNA | 22104464 | 22110109 | 22104464 | ID=MS.gene39443.t1;Parent=MS.gene39443 |
| chr4.2 | exon | 22104464 | 22104576 | 22104464 | ID=MS.gene39443.t1.exon1;Parent=MS.gene39443.t1 |
| chr4.2 | CDS | 22104464 | 22104576 | 22104464 | ID=cds.MS.gene39443.t1;Parent=MS.gene39443.t1 |
| chr4.2 | exon | 22104910 | 22105083 | 22104910 | ID=MS.gene39443.t1.exon2;Parent=MS.gene39443.t1 |
| chr4.2 | CDS | 22104910 | 22105083 | 22104910 | ID=cds.MS.gene39443.t1;Parent=MS.gene39443.t1 |
| chr4.2 | exon | 22105636 | 22105704 | 22105636 | ID=MS.gene39443.t1.exon3;Parent=MS.gene39443.t1 |
| chr4.2 | CDS | 22105636 | 22105704 | 22105636 | ID=cds.MS.gene39443.t1;Parent=MS.gene39443.t1 |
| chr4.2 | exon | 22106036 | 22106129 | 22106036 | ID=MS.gene39443.t1.exon4;Parent=MS.gene39443.t1 |
| chr4.2 | CDS | 22106036 | 22106129 | 22106036 | ID=cds.MS.gene39443.t1;Parent=MS.gene39443.t1 |
| chr4.2 | exon | 22106316 | 22106416 | 22106316 | ID=MS.gene39443.t1.exon5;Parent=MS.gene39443.t1 |
| chr4.2 | CDS | 22106316 | 22106416 | 22106316 | ID=cds.MS.gene39443.t1;Parent=MS.gene39443.t1 |
| chr4.2 | exon | 22106536 | 22106581 | 22106536 | ID=MS.gene39443.t1.exon6;Parent=MS.gene39443.t1 |
| chr4.2 | CDS | 22106536 | 22106581 | 22106536 | ID=cds.MS.gene39443.t1;Parent=MS.gene39443.t1 |
| chr4.2 | exon | 22106665 | 22106724 | 22106665 | ID=MS.gene39443.t1.exon7;Parent=MS.gene39443.t1 |
| chr4.2 | CDS | 22106665 | 22106724 | 22106665 | ID=cds.MS.gene39443.t1;Parent=MS.gene39443.t1 |
| chr4.2 | exon | 22106805 | 22106873 | 22106805 | ID=MS.gene39443.t1.exon8;Parent=MS.gene39443.t1 |
| chr4.2 | CDS | 22106805 | 22106873 | 22106805 | ID=cds.MS.gene39443.t1;Parent=MS.gene39443.t1 |
| chr4.2 | exon | 22107026 | 22107109 | 22107026 | ID=MS.gene39443.t1.exon9;Parent=MS.gene39443.t1 |
| chr4.2 | CDS | 22107026 | 22107109 | 22107026 | ID=cds.MS.gene39443.t1;Parent=MS.gene39443.t1 |
| chr4.2 | exon | 22107241 | 22107324 | 22107241 | ID=MS.gene39443.t1.exon10;Parent=MS.gene39443.t1 |
| chr4.2 | CDS | 22107241 | 22107324 | 22107241 | ID=cds.MS.gene39443.t1;Parent=MS.gene39443.t1 |
| chr4.2 | exon | 22108649 | 22108734 | 22108649 | ID=MS.gene39443.t1.exon11;Parent=MS.gene39443.t1 |
| chr4.2 | CDS | 22108649 | 22108734 | 22108649 | ID=cds.MS.gene39443.t1;Parent=MS.gene39443.t1 |
| chr4.2 | exon | 22109046 | 22109136 | 22109046 | ID=MS.gene39443.t1.exon12;Parent=MS.gene39443.t1 |
| chr4.2 | CDS | 22109046 | 22109136 | 22109046 | ID=cds.MS.gene39443.t1;Parent=MS.gene39443.t1 |
| chr4.2 | exon | 22109659 | 22109739 | 22109659 | ID=MS.gene39443.t1.exon13;Parent=MS.gene39443.t1 |
| chr4.2 | CDS | 22109659 | 22109739 | 22109659 | ID=cds.MS.gene39443.t1;Parent=MS.gene39443.t1 |
| chr4.2 | exon | 22109816 | 22109890 | 22109816 | ID=MS.gene39443.t1.exon14;Parent=MS.gene39443.t1 |
| chr4.2 | CDS | 22109816 | 22109890 | 22109816 | ID=cds.MS.gene39443.t1;Parent=MS.gene39443.t1 |
| chr4.2 | exon | 22109975 | 22110109 | 22109975 | ID=MS.gene39443.t1.exon15;Parent=MS.gene39443.t1 |
| chr4.2 | CDS | 22109975 | 22110109 | 22109975 | ID=cds.MS.gene39443.t1;Parent=MS.gene39443.t1 |
| Gene Sequence |
| Protein sequence |
