Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43946.t1 | XP_003590940.1 | 99.6 | 247 | 1 | 0 | 1 | 247 | 1 | 247 | 3.90E-135 | 490.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43946.t1 | Q7SXW4 | 43.4 | 249 | 131 | 4 | 1 | 244 | 1 | 244 | 1.2e-52 | 208.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43946.t1 | G7I684 | 99.6 | 247 | 1 | 0 | 1 | 247 | 1 | 247 | 2.8e-135 | 490.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene43946 | 0.816769 | 4.66E-52 | -1.69E-46 |
| MS.gene049499 | MS.gene43946 | 0.802937 | 4.43E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene43946 | 0.813043 | 3.13E-51 | -1.69E-46 |
| MS.gene050799 | MS.gene43946 | 0.822428 | 2.38E-53 | -1.69E-46 |
| MS.gene051699 | MS.gene43946 | 0.825286 | 5.09E-54 | -1.69E-46 |
| MS.gene052519 | MS.gene43946 | 0.820659 | 6.10E-53 | -1.69E-46 |
| MS.gene05365 | MS.gene43946 | 0.814012 | 1.91E-51 | -1.69E-46 |
| MS.gene05415 | MS.gene43946 | 0.807984 | 3.87E-50 | -1.69E-46 |
| MS.gene054222 | MS.gene43946 | 0.801352 | 9.38E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene43946 | 0.801904 | 7.23E-49 | -1.69E-46 |
| MS.gene056215 | MS.gene43946 | 0.806747 | 7.08E-50 | -1.69E-46 |
| MS.gene056272 | MS.gene43946 | 0.811391 | 7.17E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene43946 | 0.809767 | 1.61E-50 | -1.69E-46 |
| MS.gene057598 | MS.gene43946 | 0.81972 | 1.00E-52 | -1.69E-46 |
| MS.gene058008 | MS.gene43946 | 0.810239 | 1.27E-50 | -1.69E-46 |
| MS.gene058009 | MS.gene43946 | 0.806624 | 7.51E-50 | -1.69E-46 |
| MS.gene058037 | MS.gene43946 | 0.812046 | 5.16E-51 | -1.69E-46 |
| MS.gene058159 | MS.gene43946 | 0.816458 | 5.47E-52 | -1.69E-46 |
| MS.gene05954 | MS.gene43946 | 0.809812 | 1.57E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene43946 | 0.821898 | 3.16E-53 | -1.69E-46 |
| MS.gene05985 | MS.gene43946 | -0.802351 | 5.85E-49 | -1.69E-46 |
| MS.gene059935 | MS.gene43946 | 0.821715 | 3.48E-53 | -1.69E-46 |
| MS.gene060429 | MS.gene43946 | 0.811147 | 8.10E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene43946 | 0.813586 | 2.38E-51 | -1.69E-46 |
| MS.gene060572 | MS.gene43946 | 0.80844 | 3.09E-50 | -1.69E-46 |
| MS.gene060634 | MS.gene43946 | -0.81222 | 4.73E-51 | -1.69E-46 |
| MS.gene061160 | MS.gene43946 | 0.803285 | 3.75E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43946.t1 | MTR_1g079890 | 99.595 | 247 | 1 | 0 | 1 | 247 | 1 | 247 | 0.0 | 508 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43946.t1 | AT4G12590 | 83.333 | 246 | 40 | 1 | 1 | 246 | 1 | 245 | 4.13e-154 | 428 |
Find 56 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGCATGATGCTCGAAATT+TGG | 0.208439 | 1.3:-56572241 | None:intergenic |
| TCCGTTGTTATGGTTCTTAT+TGG | 0.227769 | 1.3:+56568209 | MS.gene43946:CDS |
| TTTAGGTCCATGTTACAAAA+TGG | 0.280773 | 1.3:+56571300 | MS.gene43946:CDS |
| CTCAATCTGTTTGGCTTAAG+AGG | 0.312313 | 1.3:+56571450 | MS.gene43946:CDS |
| TTCCATTGACTCAAAGGTTT+AGG | 0.321368 | 1.3:+56571283 | MS.gene43946:CDS |
| TATCCCTTTATCCGTTGTTA+TGG | 0.332373 | 1.3:+56568199 | MS.gene43946:CDS |
| AGAACCATAACAACGGATAA+AGG | 0.351939 | 1.3:-56568203 | None:intergenic |
| GTGCTTGTGGGTTCGTGGCT+TGG | 0.356043 | 1.3:-56568790 | None:intergenic |
| ATTCGTATTTGTACCTTTGA+AGG | 0.376759 | 1.3:-56571698 | None:intergenic |
| TAGAATAATGGCGGAAGATC+TGG | 0.378579 | 1.3:+56568145 | None:intergenic |
| TGGATACTGCAATCAGAGAT+TGG | 0.384123 | 1.3:+56568171 | MS.gene43946:CDS |
| CGGGCACGAAAAGCCTTAGA+AGG | 0.386182 | 1.3:-56568441 | None:intergenic |
| AATGGCGGAAGATCTGGTTT+TGG | 0.395876 | 1.3:+56568151 | None:intergenic |
| AGGATTGTTTAGTCTCATCT+TGG | 0.396848 | 1.3:+56571470 | MS.gene43946:CDS |
| GGGTTCGTGGCTTGGCCCTT+TGG | 0.400937 | 1.3:-56568782 | None:intergenic |
| AGGTACTTTCTCAATCTGTT+TGG | 0.404129 | 1.3:+56571441 | MS.gene43946:intron |
| GGATTGTTTAGTCTCATCTT+GGG | 0.407530 | 1.3:+56571471 | MS.gene43946:CDS |
| GACCTAAACCTTTGAGTCAA+TGG | 0.428275 | 1.3:-56571285 | None:intergenic |
| TTGACATAACCCAACATGAC+TGG | 0.428580 | 1.3:+56572212 | MS.gene43946:CDS |
| ATGCAAATGGGTGGTGGATT+CGG | 0.429326 | 1.3:+56571668 | MS.gene43946:CDS |
| GAACCATAACAACGGATAAA+GGG | 0.432462 | 1.3:-56568202 | None:intergenic |
| GGATACTGCAATCAGAGATT+GGG | 0.436107 | 1.3:+56568172 | MS.gene43946:CDS |
| AGTCAATGGAAAAGGTATCT+TGG | 0.442786 | 1.3:-56571271 | None:intergenic |
| ATCATATCCATGGCCATGTT+CGG | 0.446386 | 1.3:-56568827 | None:intergenic |
| TGGCAAGGCCCAGTCATGTT+GGG | 0.461277 | 1.3:-56572221 | None:intergenic |
| ATTACAATAATAAAGCTTGC+GGG | 0.463442 | 1.3:-56568460 | None:intergenic |
| TGGTCTGTTGTTCGTTCCAA+AGG | 0.466535 | 1.3:+56568766 | MS.gene43946:CDS |
| AACCTTTGAGTCAATGGAAA+AGG | 0.476417 | 1.3:-56571279 | None:intergenic |
| GCTATGTCAGCAGTCGCTCC+TGG | 0.485535 | 1.3:+56571349 | MS.gene43946:CDS |
| TTGGGAAGAACGCAGAAGCT+TGG | 0.489162 | 1.3:-56568252 | None:intergenic |
| CAAGCTTTATTATTGTAATG+AGG | 0.490585 | 1.3:+56568464 | MS.gene43946:CDS |
| CATCTGTGCTTGTGGGTTCG+TGG | 0.491546 | 1.3:-56568795 | None:intergenic |
| CAGAGAACATCTGTGCTTGT+GGG | 0.494582 | 1.3:-56568802 | None:intergenic |
| TACACAAAGAATGATGCAAA+TGG | 0.499016 | 1.3:+56571655 | MS.gene43946:CDS |
| TCAGAGAACATCTGTGCTTG+TGG | 0.528122 | 1.3:-56568803 | None:intergenic |
| TGACATAACCCAACATGACT+GGG | 0.533631 | 1.3:+56572213 | MS.gene43946:CDS |
| GGTCTGTTGTTCGTTCCAAA+GGG | 0.539924 | 1.3:+56568767 | MS.gene43946:CDS |
| TCTTTCAATGATCATACCTC+AGG | 0.547565 | 1.3:+56568859 | MS.gene43946:CDS |
| CTCTGATCCGAACATGGCCA+TGG | 0.554603 | 1.3:+56568820 | MS.gene43946:CDS |
| TTGGCAAGGCCCAGTCATGT+TGG | 0.556486 | 1.3:-56572222 | None:intergenic |
| GATATCAAAATTGTCAGAGA+AGG | 0.558054 | 1.3:+56568281 | MS.gene43946:CDS |
| ATTCGGATTTGATCCTTCAA+AGG | 0.558196 | 1.3:+56571685 | MS.gene43946:CDS |
| GATTGTTTAGTCTCATCTTG+GGG | 0.571481 | 1.3:+56571472 | MS.gene43946:CDS |
| AGCTCGGAATTTACGTGCTG+CGG | 0.574470 | 1.3:+56568407 | MS.gene43946:CDS |
| ACACAAAGAATGATGCAAAT+GGG | 0.575278 | 1.3:+56571656 | MS.gene43946:CDS |
| CATTACAATAATAAAGCTTG+CGG | 0.576893 | 1.3:-56568461 | None:intergenic |
| AGAATGATGCAAATGGGTGG+TGG | 0.577037 | 1.3:+56571662 | MS.gene43946:CDS |
| GGCAAGTTATGCTTAGAGCT+CGG | 0.581999 | 1.3:+56568391 | MS.gene43946:intron |
| ATATCAAAATTGTCAGAGAA+GGG | 0.586701 | 1.3:+56568282 | MS.gene43946:CDS |
| GATGTTCTCTGATCCGAACA+TGG | 0.617346 | 1.3:+56568814 | MS.gene43946:CDS |
| ATGATGCTCGAAATTTGGCA+AGG | 0.632426 | 1.3:-56572236 | None:intergenic |
| ACCAATAAGAACCATAACAA+CGG | 0.636744 | 1.3:-56568210 | None:intergenic |
| ATTGTTTAGTCTCATCTTGG+GGG | 0.651233 | 1.3:+56571473 | MS.gene43946:CDS |
| AGCTAACATCAACTGTGCTG+AGG | 0.659434 | 1.3:-56571329 | None:intergenic |
| GGGCACGAAAAGCCTTAGAA+GGG | 0.660230 | 1.3:-56568440 | None:intergenic |
| CAAAGAATGATGCAAATGGG+TGG | 0.748607 | 1.3:+56571659 | MS.gene43946:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATACAAAAAATTAAAAC+TGG | - | chr1.3:56569187-56569206 | None:intergenic | 10.0% |
| !! | TTAAATTTATGTTTCTTATT+TGG | + | chr1.3:56568525-56568544 | MS.gene43946:intron | 10.0% |
| !!! | TAAATTTATGTTTCTTATTT+GGG | + | chr1.3:56568526-56568545 | MS.gene43946:intron | 10.0% |
| !! | GAAGAAATCATAATAAAAAT+AGG | + | chr1.3:56569878-56569897 | MS.gene43946:intron | 15.0% |
| !! | TAAGATTATAAACAAATTCT+AGG | + | chr1.3:56569931-56569950 | MS.gene43946:intron | 15.0% |
| !!! | ATTTTTATTATGATTTCTTC+TGG | - | chr1.3:56569878-56569897 | None:intergenic | 15.0% |
| !!! | TTTTTAACCTTTTCTTATAA+AGG | - | chr1.3:56571960-56571979 | None:intergenic | 15.0% |
| !!! | TTTTTAATTTGATTATGTTG+TGG | + | chr1.3:56568358-56568377 | MS.gene43946:intron | 15.0% |
| !! | AATTAACAACTTATTGTTTG+AGG | + | chr1.3:56568580-56568599 | MS.gene43946:intron | 20.0% |
| !! | TAAAACTATAATTTCCAAGT+TGG | - | chr1.3:56571757-56571776 | None:intergenic | 20.0% |
| !!! | AGATACTCTTTTCTTTTTTA+TGG | + | chr1.3:56569964-56569983 | MS.gene43946:intron | 20.0% |
| !!! | ATAAGTCTCAATTTTTTAGA+TGG | + | chr1.3:56570065-56570084 | MS.gene43946:intron | 20.0% |
| !!! | ATAATCTTAAAGTATCTCTT+AGG | - | chr1.3:56569920-56569939 | None:intergenic | 20.0% |
| !!! | ATTCTTGGTTTTTTTTCTTT+TGG | + | chr1.3:56569478-56569497 | MS.gene43946:intron | 20.0% |
| !!! | ATTTTGTAGTTCTATATAGT+TGG | - | chr1.3:56569647-56569666 | None:intergenic | 20.0% |
| !!! | ATTTTTTGTATATATACGGT+TGG | + | chr1.3:56569193-56569212 | MS.gene43946:intron | 20.0% |
| !!! | CAATTTTTGTTAAAGGAAAA+TGG | + | chr1.3:56568746-56568765 | MS.gene43946:intron | 20.0% |
| !!! | TGTTTGTCAATTTTTGTTAA+AGG | + | chr1.3:56568739-56568758 | MS.gene43946:intron | 20.0% |
| ! | AAAGAGGAAAAATCTACTAT+GGG | - | chr1.3:56570146-56570165 | None:intergenic | 25.0% |
| ! | AAATTCTATTACTGAGTAAC+AGG | + | chr1.3:56571005-56571024 | MS.gene43946:intron | 25.0% |
| ! | AATGGGAGATAAAATAAAAG+GGG | + | chr1.3:56569581-56569600 | MS.gene43946:intron | 25.0% |
| ! | AATTGAGACTTATAGTACTT+AGG | - | chr1.3:56570058-56570077 | None:intergenic | 25.0% |
| ! | AGAATGGGAGATAAAATAAA+AGG | + | chr1.3:56569579-56569598 | MS.gene43946:intron | 25.0% |
| ! | ATATCAAAATTGTCAGAGAA+GGG | + | chr1.3:56568282-56568301 | MS.gene43946:CDS | 25.0% |
| ! | ATATCAACTAATCAAACAGA+CGG | + | chr1.3:56569292-56569311 | MS.gene43946:intron | 25.0% |
| ! | ATATCTTGACTTATTGTCTA+TGG | + | chr1.3:56569236-56569255 | MS.gene43946:intron | 25.0% |
| ! | ATGTATAACTTTACCAAACT+TGG | + | chr1.3:56570634-56570653 | MS.gene43946:intron | 25.0% |
| ! | ATTACAATAATAAAGCTTGC+GGG | - | chr1.3:56568463-56568482 | None:intergenic | 25.0% |
| ! | CATTACAATAATAAAGCTTG+CGG | - | chr1.3:56568464-56568483 | None:intergenic | 25.0% |
| ! | GAAAAATCAGAGAATACATT+AGG | + | chr1.3:56569704-56569723 | MS.gene43946:intron | 25.0% |
| ! | GAATGGGAGATAAAATAAAA+GGG | + | chr1.3:56569580-56569599 | MS.gene43946:intron | 25.0% |
| ! | GGTTAAAAAAGAATAGTTCT+TGG | + | chr1.3:56571971-56571990 | MS.gene43946:intron | 25.0% |
| ! | GTAAACAATACAAGTTAGTA+TGG | - | chr1.3:56568979-56568998 | None:intergenic | 25.0% |
| ! | GTAGTGTCATAATATTAGAT+TGG | + | chr1.3:56569089-56569108 | MS.gene43946:intron | 25.0% |
| ! | TATCCAAATTCCAGTTATAA+TGG | - | chr1.3:56571583-56571602 | None:intergenic | 25.0% |
| ! | TTAGTATGGCAATTCATAAT+TGG | - | chr1.3:56568965-56568984 | None:intergenic | 25.0% |
| ! | TTGTATTGTTTACTCTTGTT+GGG | + | chr1.3:56568986-56569005 | MS.gene43946:intron | 25.0% |
| ! | TTTCCATTATAACTGGAATT+TGG | + | chr1.3:56571577-56571596 | MS.gene43946:intron | 25.0% |
| !! | AAAAAGTATAATAACAGGCA+AGG | - | chr1.3:56568941-56568960 | None:intergenic | 25.0% |
| !! | ATTTTTCTTCATCATATCCA+TGG | - | chr1.3:56568840-56568859 | None:intergenic | 25.0% |
| !! | TCTGATTTTTCCTATGAATT+GGG | - | chr1.3:56569695-56569714 | None:intergenic | 25.0% |
| !! | TTAACCTTTTCTTATAAAGG+TGG | - | chr1.3:56571957-56571976 | None:intergenic | 25.0% |
| !! | TTGGCAAAAAGTATAATAAC+AGG | - | chr1.3:56568946-56568965 | None:intergenic | 25.0% |
| !! | TTGTGGGATTTTAGATAAAA+GGG | + | chr1.3:56569733-56569752 | MS.gene43946:intron | 25.0% |
| !!! | AAGTTTTAGTTCAATAACTG+CGG | - | chr1.3:56571033-56571052 | None:intergenic | 25.0% |
| !!! | AATTTTGATATCAGGAGTTT+GGG | - | chr1.3:56568273-56568292 | None:intergenic | 25.0% |
| !!! | ACCTTTTTAATCTTGTTTTC+AGG | + | chr1.3:56572165-56572184 | MS.gene43946:intron | 25.0% |
| !!! | AGAAAACCTTTAAAACTCAT+CGG | + | chr1.3:56568631-56568650 | MS.gene43946:intron | 25.0% |
| !!! | ATAATTTTGAAGATCCAACT+TGG | + | chr1.3:56571740-56571759 | MS.gene43946:intron | 25.0% |
| !!! | CAAGCTTTATTATTGTAATG+AGG | + | chr1.3:56568464-56568483 | MS.gene43946:CDS | 25.0% |
| !!! | CCTTTTTAATCTTGTTTTCA+GGG | + | chr1.3:56572166-56572185 | MS.gene43946:intron | 25.0% |
| !!! | GTTTTTTTTCTTTTGGTTCA+AGG | + | chr1.3:56569485-56569504 | MS.gene43946:intron | 25.0% |
| !!! | TGTTGTTTTTCCATTATAAC+TGG | + | chr1.3:56571570-56571589 | MS.gene43946:intron | 25.0% |
| !!! | TTATGTTGTGGTTTTAATAC+AGG | + | chr1.3:56568370-56568389 | MS.gene43946:intron | 25.0% |
| !!! | TTTTTTAGATGGATCATGTT+TGG | + | chr1.3:56570076-56570095 | MS.gene43946:intron | 25.0% |
| AAACACTAATCCCTGTTTAT+AGG | + | chr1.3:56569829-56569848 | MS.gene43946:intron | 30.0% | |
| AACACTAATCCCTGTTTATA+GGG | + | chr1.3:56569830-56569849 | MS.gene43946:intron | 30.0% | |
| AATTGTCATGATTGCATTTC+AGG | + | chr1.3:56571421-56571440 | MS.gene43946:intron | 30.0% | |
| ACAAACTTAACACTTTGTTG+TGG | + | chr1.3:56570658-56570677 | MS.gene43946:intron | 30.0% | |
| ACACAAAGAATGATGCAAAT+GGG | + | chr1.3:56571656-56571675 | MS.gene43946:CDS | 30.0% | |
| ACATATGATAGATTACCTAG+TGG | + | chr1.3:56569335-56569354 | MS.gene43946:intron | 30.0% | |
| ACCAATAAGAACCATAACAA+CGG | - | chr1.3:56568213-56568232 | None:intergenic | 30.0% | |
| AGATATATACGTGCTTATTC+AGG | - | chr1.3:56569222-56569241 | None:intergenic | 30.0% | |
| AGATGATAGACAGTCATAAA+TGG | + | chr1.3:56569555-56569574 | MS.gene43946:intron | 30.0% | |
| AGTGAAACTTCAAAATCCAA+CGG | - | chr1.3:56570105-56570124 | None:intergenic | 30.0% | |
| AGTTATACATATGTATGCTC+TGG | - | chr1.3:56570624-56570643 | None:intergenic | 30.0% | |
| ATTCGTATTTGTACCTTTGA+AGG | - | chr1.3:56571701-56571720 | None:intergenic | 30.0% | |
| ATTTCATGGTCGTAAAAATG+GGG | - | chr1.3:56570600-56570619 | None:intergenic | 30.0% | |
| CATATGATAGATTACCTAGT+GGG | + | chr1.3:56569336-56569355 | MS.gene43946:intron | 30.0% | |
| CATTTCATGGTCGTAAAAAT+GGG | - | chr1.3:56570601-56570620 | None:intergenic | 30.0% | |
| CATTTGTCTAACCAATTCAA+CGG | + | chr1.3:56568707-56568726 | MS.gene43946:intron | 30.0% | |
| CCCTGAAAACAAGATTAAAA+AGG | - | chr1.3:56572169-56572188 | None:intergenic | 30.0% | |
| CTAATATTATGACACTACGA+CGG | - | chr1.3:56569087-56569106 | None:intergenic | 30.0% | |
| CTATCAAAGAAATGTACCAA+GGG | + | chr1.3:56569373-56569392 | MS.gene43946:intron | 30.0% | |
| CTATGAAAAAGAAGATTACC+AGG | - | chr1.3:56571370-56571389 | None:intergenic | 30.0% | |
| CTTGTATTGTTTACTCTTGT+TGG | + | chr1.3:56568985-56569004 | MS.gene43946:intron | 30.0% | |
| GAAAGAGGAAAAATCTACTA+TGG | - | chr1.3:56570147-56570166 | None:intergenic | 30.0% | |
| GATATCAAAATTGTCAGAGA+AGG | + | chr1.3:56568281-56568300 | MS.gene43946:CDS | 30.0% | |
| GATGATAGACAGTCATAAAT+GGG | + | chr1.3:56569556-56569575 | MS.gene43946:intron | 30.0% | |
| GATTGAATAGGATTCAATCA+TGG | - | chr1.3:56570827-56570846 | None:intergenic | 30.0% | |
| TACAAAGAGAAGCAAAATGT+AGG | + | chr1.3:56571922-56571941 | MS.gene43946:intron | 30.0% | |
| TACACAAAGAATGATGCAAA+TGG | + | chr1.3:56571655-56571674 | MS.gene43946:CDS | 30.0% | |
| TATCAAAGAAATGTACCAAG+GGG | + | chr1.3:56569374-56569393 | MS.gene43946:intron | 30.0% | |
| TATTTGGGAGAACAATGTAA+TGG | + | chr1.3:56568541-56568560 | MS.gene43946:intron | 30.0% | |
| TTTACATCAATCTTGTCTAC+TGG | + | chr1.3:56570947-56570966 | MS.gene43946:intron | 30.0% | |
| TTTAGGTCCATGTTACAAAA+TGG | + | chr1.3:56571300-56571319 | MS.gene43946:CDS | 30.0% | |
| ! | ATCAAACAGACGGTTTTTAT+TGG | + | chr1.3:56569302-56569321 | MS.gene43946:intron | 30.0% |
| ! | CACTTGTTACAAATTACGAT+TGG | + | chr1.3:56571605-56571624 | MS.gene43946:intron | 30.0% |
| ! | CTCTGATTTTTCCTATGAAT+TGG | - | chr1.3:56569696-56569715 | None:intergenic | 30.0% |
| ! | GACTTATAGTACTTAGGTTT+TGG | - | chr1.3:56570052-56570071 | None:intergenic | 30.0% |
| ! | GTCTATTCCATTTTGTAACA+TGG | - | chr1.3:56571310-56571329 | None:intergenic | 30.0% |
| ! | GTTGTGGGATTTTAGATAAA+AGG | + | chr1.3:56569732-56569751 | MS.gene43946:intron | 30.0% |
| ! | TATTTGAAACTGCAAAGCTA+AGG | - | chr1.3:56572075-56572094 | None:intergenic | 30.0% |
| ! | TGTGGGATTTTAGATAAAAG+GGG | + | chr1.3:56569734-56569753 | MS.gene43946:intron | 30.0% |
| ! | TGTGTCAAGATAACATCTTT+TGG | - | chr1.3:56569525-56569544 | None:intergenic | 30.0% |
| ! | TGTTAAGTTTGTTCCAAGTT+TGG | - | chr1.3:56570650-56570669 | None:intergenic | 30.0% |
| ! | TTCAAAGGTACAAATACGAA+TGG | + | chr1.3:56571700-56571719 | MS.gene43946:intron | 30.0% |
| !! | AATACATTAGGTTGAAGTTG+TGG | + | chr1.3:56569716-56569735 | MS.gene43946:intron | 30.0% |
| !! | AATGTAATGGCTTTTGTTGT+GGG | + | chr1.3:56568554-56568573 | MS.gene43946:intron | 30.0% |
| !! | ATACATTAGGTTGAAGTTGT+GGG | + | chr1.3:56569717-56569736 | MS.gene43946:intron | 30.0% |
| !! | CAATTTTGATATCAGGAGTT+TGG | - | chr1.3:56568274-56568293 | None:intergenic | 30.0% |
| !! | GTGTATTCTAGTTTGATAGA+AGG | + | chr1.3:56568501-56568520 | MS.gene43946:intron | 30.0% |
| !! | GTTACTGTGTCATTAGATTT+TGG | + | chr1.3:56568907-56568926 | MS.gene43946:intron | 30.0% |
| !! | TAACTTCCGATGAGTTTTAA+AGG | - | chr1.3:56568640-56568659 | None:intergenic | 30.0% |
| !! | TCTCTGACAATTTTGATATC+AGG | - | chr1.3:56568281-56568300 | None:intergenic | 30.0% |
| !! | TGAATTTTGCTATGCTATAG+AGG | - | chr1.3:56570304-56570323 | None:intergenic | 30.0% |
| !!! | CTCGAGTTTTTTTTTAGCAA+AGG | + | chr1.3:56571871-56571890 | MS.gene43946:intron | 30.0% |
| AACACAAGTAAGAGTGAAAC+AGG | - | chr1.3:56571400-56571419 | None:intergenic | 35.0% | |
| AACCTCTGTTTGACAACATT+GGG | - | chr1.3:56570171-56570190 | None:intergenic | 35.0% | |
| AACCTTTGAGTCAATGGAAA+AGG | - | chr1.3:56571282-56571301 | None:intergenic | 35.0% | |
| AATTAGCCAATTTCTCAGCA+AGG | - | chr1.3:56571999-56572018 | None:intergenic | 35.0% | |
| ACAGTCATAAATGGGAGAAT+GGG | + | chr1.3:56569564-56569583 | MS.gene43946:intron | 35.0% | |
| AGAAATTGGCTAATTGCCTT+GGG | + | chr1.3:56572004-56572023 | MS.gene43946:intron | 35.0% | |
| AGAACCATAACAACGGATAA+AGG | - | chr1.3:56568206-56568225 | None:intergenic | 35.0% | |
| AGGATTGTTTAGTCTCATCT+TGG | + | chr1.3:56571470-56571489 | MS.gene43946:CDS | 35.0% | |
| AGGTACTTTCTCAATCTGTT+TGG | + | chr1.3:56571441-56571460 | MS.gene43946:intron | 35.0% | |
| ATTCGGATTTGATCCTTCAA+AGG | + | chr1.3:56571685-56571704 | MS.gene43946:CDS | 35.0% | |
| ATTGTTTAGTCTCATCTTGG+GGG | + | chr1.3:56571473-56571492 | MS.gene43946:CDS | 35.0% | |
| ATTTGAGAAGCAGATAACAG+AGG | - | chr1.3:56571231-56571250 | None:intergenic | 35.0% | |
| CAATTAGTTCACCGTTGAAT+TGG | - | chr1.3:56568721-56568740 | None:intergenic | 35.0% | |
| CATTCACAATCCCAATTCAT+AGG | + | chr1.3:56569682-56569701 | MS.gene43946:intron | 35.0% | |
| GAAAGCAATGTTGTCAATTG+TGG | - | chr1.3:56570350-56570369 | None:intergenic | 35.0% | |
| GAACCATAACAACGGATAAA+GGG | - | chr1.3:56568205-56568224 | None:intergenic | 35.0% | |
| GATTGTTTAGTCTCATCTTG+GGG | + | chr1.3:56571472-56571491 | MS.gene43946:CDS | 35.0% | |
| GCATTTCATGGTCGTAAAAA+TGG | - | chr1.3:56570602-56570621 | None:intergenic | 35.0% | |
| GCTATCAAAGAAATGTACCA+AGG | + | chr1.3:56569372-56569391 | MS.gene43946:intron | 35.0% | |
| GGATTGTTTAGTCTCATCTT+GGG | + | chr1.3:56571471-56571490 | MS.gene43946:CDS | 35.0% | |
| GTATACATCATCTTCAACGA+AGG | - | chr1.3:56570524-56570543 | None:intergenic | 35.0% | |
| TAACCTCTGTTTGACAACAT+TGG | - | chr1.3:56570172-56570191 | None:intergenic | 35.0% | |
| TAATCTATTCTCAACACCTG+AGG | - | chr1.3:56568878-56568897 | None:intergenic | 35.0% | |
| TATCCCTTTATCCGTTGTTA+TGG | + | chr1.3:56568199-56568218 | MS.gene43946:CDS | 35.0% | |
| TCCGTTGTTATGGTTCTTAT+TGG | + | chr1.3:56568209-56568228 | MS.gene43946:CDS | 35.0% | |
| TCTGCCACCTTTATAAGAAA+AGG | + | chr1.3:56571950-56571969 | MS.gene43946:intron | 35.0% | |
| TCTGTGTATCCCTATAAACA+GGG | - | chr1.3:56569842-56569861 | None:intergenic | 35.0% | |
| TCTTTCAATGATCATACCTC+AGG | + | chr1.3:56568859-56568878 | MS.gene43946:CDS | 35.0% | |
| TGTTAGAAACTACAGTAGGT+AGG | - | chr1.3:56572127-56572146 | None:intergenic | 35.0% | |
| TGTTTATGCCTGTCATGTTA+CGG | + | chr1.3:56569151-56569170 | MS.gene43946:intron | 35.0% | |
| TTTCATGGTCGTAAAAATGG+GGG | - | chr1.3:56570599-56570618 | None:intergenic | 35.0% | |
| ! | ACAACTAGTTTGAGCATACA+AGG | + | chr1.3:56569399-56569418 | MS.gene43946:intron | 35.0% |
| ! | AGGGATTAGTGTTTAGTCTT+CGG | - | chr1.3:56569823-56569842 | None:intergenic | 35.0% |
| ! | CAATGTAATGGCTTTTGTTG+TGG | + | chr1.3:56568553-56568572 | MS.gene43946:intron | 35.0% |
| ! | GCTTTGTTAGAAACTACAGT+AGG | - | chr1.3:56572131-56572150 | None:intergenic | 35.0% |
| ! | GGCTAATTTTATCCCTTCTA+AGG | + | chr1.3:56568428-56568447 | MS.gene43946:CDS | 35.0% |
| ! | GTGGGATTTTAGATAAAAGG+GGG | + | chr1.3:56569735-56569754 | MS.gene43946:intron | 35.0% |
| ! | TACGAAGTTTTGCCAAATAG+AGG | + | chr1.3:56570261-56570280 | MS.gene43946:intron | 35.0% |
| ! | TTCTTTTCTGGATTTGTAGC+AGG | + | chr1.3:56569039-56569058 | MS.gene43946:CDS | 35.0% |
| ! | TTGTGGATTGCAGAAAATAG+CGG | - | chr1.3:56570333-56570352 | None:intergenic | 35.0% |
| !! | AGTCAATGGAAAAGGTATCT+TGG | - | chr1.3:56571274-56571293 | None:intergenic | 35.0% |
| !! | GTAGACTCTTACTTTTGCTT+GGG | + | chr1.3:56569008-56569027 | MS.gene43946:intron | 35.0% |
| !! | TGGGTGAACTTTTTCTTTTC+TGG | + | chr1.3:56569027-56569046 | MS.gene43946:CDS | 35.0% |
| !! | TTCCATTGACTCAAAGGTTT+AGG | + | chr1.3:56571283-56571302 | MS.gene43946:CDS | 35.0% |
| !!! | TACCTTTTCCATTGACTCAA+AGG | + | chr1.3:56571277-56571296 | MS.gene43946:CDS | 35.0% |
| AACAGAGGCAAGGAATACAA+GGG | - | chr1.3:56571216-56571235 | None:intergenic | 40.0% | |
| ACAGCTATAAGTGTGTACCA+AGG | + | chr1.3:56569445-56569464 | MS.gene43946:intron | 40.0% | |
| ACGAGGAAATATCCATATGG+AGG | + | chr1.3:56571815-56571834 | MS.gene43946:intron | 40.0% | |
| ATCATATCCATGGCCATGTT+CGG | - | chr1.3:56568830-56568849 | None:intergenic | 40.0% | |
| ATGATGCTCGAAATTTGGCA+AGG | - | chr1.3:56572239-56572258 | None:intergenic | 40.0% | |
| ATGTATGCTCTGGCATTTCA+TGG | - | chr1.3:56570614-56570633 | None:intergenic | 40.0% | |
| CAAAGAATGATGCAAATGGG+TGG | + | chr1.3:56571659-56571678 | MS.gene43946:CDS | 40.0% | |
| CAAGAATCAAAGTTGACCCT+TGG | - | chr1.3:56569465-56569484 | None:intergenic | 40.0% | |
| CAAGGGTCAACTTTGATTCT+TGG | + | chr1.3:56569463-56569482 | MS.gene43946:intron | 40.0% | |
| CAGCTATAAGTGTGTACCAA+GGG | + | chr1.3:56569446-56569465 | MS.gene43946:intron | 40.0% | |
| CATCGTATCAGCGATTGAAT+AGG | - | chr1.3:56570839-56570858 | None:intergenic | 40.0% | |
| CTAAATGTGAGTAACCCACT+AGG | - | chr1.3:56569353-56569372 | None:intergenic | 40.0% | |
| CTCACGAGGAAATATCCATA+TGG | + | chr1.3:56571812-56571831 | MS.gene43946:intron | 40.0% | |
| GACAGTCATAAATGGGAGAA+TGG | + | chr1.3:56569563-56569582 | MS.gene43946:intron | 40.0% | |
| GACCTAAACCTTTGAGTCAA+TGG | - | chr1.3:56571288-56571307 | None:intergenic | 40.0% | |
| GACTGTCTATCATCTGCAAA+AGG | - | chr1.3:56569550-56569569 | None:intergenic | 40.0% | |
| GAGAAATTGGCTAATTGCCT+TGG | + | chr1.3:56572003-56572022 | MS.gene43946:intron | 40.0% | |
| GAGGAAAAATCTACTATGGG+AGG | - | chr1.3:56570143-56570162 | None:intergenic | 40.0% | |
| GGATACTGCAATCAGAGATT+GGG | + | chr1.3:56568172-56568191 | MS.gene43946:CDS | 40.0% | |
| GGATATTTCCTCGTGAGATA+TGG | - | chr1.3:56571809-56571828 | None:intergenic | 40.0% | |
| GGTACACACTTATAGCTGTT+GGG | - | chr1.3:56569444-56569463 | None:intergenic | 40.0% | |
| GTAGCTTAACTACTTCACTG+AGG | + | chr1.3:56571842-56571861 | MS.gene43946:intron | 40.0% | |
| GTCTGTGTATCCCTATAAAC+AGG | - | chr1.3:56569843-56569862 | None:intergenic | 40.0% | |
| TAAATGTCGAACTGTGACGA+GGG | + | chr1.3:56572098-56572117 | MS.gene43946:intron | 40.0% | |
| TAACAGAGGCAAGGAATACA+AGG | - | chr1.3:56571217-56571236 | None:intergenic | 40.0% | |
| TAACTCTCTGACTCTATCAC+AGG | + | chr1.3:56568661-56568680 | MS.gene43946:intron | 40.0% | |
| TAAGCTACAGAACCTCCATA+TGG | - | chr1.3:56571830-56571849 | None:intergenic | 40.0% | |
| TATAGTTGCCTTGCACGAAA+AGG | + | chr1.3:56571149-56571168 | MS.gene43946:intron | 40.0% | |
| TCAGCATGATGCTCGAAATT+TGG | - | chr1.3:56572244-56572263 | None:intergenic | 40.0% | |
| TGAAGATGATGTATACCCCA+AGG | + | chr1.3:56570528-56570547 | MS.gene43946:intron | 40.0% | |
| TGACATAACCCAACATGACT+GGG | + | chr1.3:56572213-56572232 | MS.gene43946:CDS | 40.0% | |
| TGAGATGAAGTAGCAGATTG+AGG | + | chr1.3:56570793-56570812 | MS.gene43946:intron | 40.0% | |
| TGGATACTGCAATCAGAGAT+TGG | + | chr1.3:56568171-56568190 | MS.gene43946:CDS | 40.0% | |
| TGGTACACACTTATAGCTGT+TGG | - | chr1.3:56569445-56569464 | None:intergenic | 40.0% | |
| TTCATGGTCGTAAAAATGGG+GGG | - | chr1.3:56570598-56570617 | None:intergenic | 40.0% | |
| TTGACAACATTGGGAGAAAG+AGG | - | chr1.3:56570162-56570181 | None:intergenic | 40.0% | |
| TTGACATAACCCAACATGAC+TGG | + | chr1.3:56572212-56572231 | MS.gene43946:CDS | 40.0% | |
| TTGCGAGAGAATGAGATCAA+AGG | + | chr1.3:56570883-56570902 | MS.gene43946:intron | 40.0% | |
| TTGGGATGCTATACAAGCAA+GGG | + | chr1.3:56572022-56572041 | MS.gene43946:intron | 40.0% | |
| ! | AACTAAAGCCTTTTCGTGCA+AGG | - | chr1.3:56571160-56571179 | None:intergenic | 40.0% |
| ! | CTCAATCTGTTTGGCTTAAG+AGG | + | chr1.3:56571450-56571469 | MS.gene43946:CDS | 40.0% |
| ! | CTGCTTGCTACAAAGATTGA+GGG | + | chr1.3:56569266-56569285 | MS.gene43946:intron | 40.0% |
| ! | GTTTTGCCAAATAGAGGCTA+TGG | + | chr1.3:56570267-56570286 | MS.gene43946:intron | 40.0% |
| ! | TCTGCTTGCTACAAAGATTG+AGG | + | chr1.3:56569265-56569284 | MS.gene43946:intron | 40.0% |
| ! | TTGTTGTTGGCTATTGCTGA+AGG | + | chr1.3:56570756-56570775 | MS.gene43946:intron | 40.0% |
| !! | GGTAGACTCTTACTTTTGCT+TGG | + | chr1.3:56569007-56569026 | MS.gene43946:intron | 40.0% |
| AAATGTCGAACTGTGACGAG+GGG | + | chr1.3:56572099-56572118 | MS.gene43946:intron | 45.0% | |
| ACAAGAGACGCAAAGATTGC+TGG | - | chr1.3:56570436-56570455 | None:intergenic | 45.0% | |
| AGAAGCAGATAACAGAGGCA+AGG | - | chr1.3:56571226-56571245 | None:intergenic | 45.0% | |
| AGAATGATGCAAATGGGTGG+TGG | + | chr1.3:56571662-56571681 | MS.gene43946:CDS | 45.0% | |
| AGCTAACATCAACTGTGCTG+AGG | - | chr1.3:56571332-56571351 | None:intergenic | 45.0% | |
| CAGAGAACATCTGTGCTTGT+GGG | - | chr1.3:56568805-56568824 | None:intergenic | 45.0% | |
| CCACGATAGCTACCAGAATT+AGG | + | chr1.3:56570721-56570740 | MS.gene43946:intron | 45.0% | |
| CCAGAATTAGGCTAGAACAG+AGG | + | chr1.3:56570733-56570752 | MS.gene43946:intron | 45.0% | |
| CCTAATTCTGGTAGCTATCG+TGG | - | chr1.3:56570724-56570743 | None:intergenic | 45.0% | |
| CCTCGTGAGATATGGAGAAA+GGG | - | chr1.3:56571801-56571820 | None:intergenic | 45.0% | |
| CCTCTGTTCTAGCCTAATTC+TGG | - | chr1.3:56570736-56570755 | None:intergenic | 45.0% | |
| CTATACAAGCAAGGGGTTCA+GGG | + | chr1.3:56572030-56572049 | MS.gene43946:intron | 45.0% | |
| CTCATCTTGGGGGAAGAAAA+TGG | + | chr1.3:56571483-56571502 | MS.gene43946:CDS | 45.0% | |
| CTCCCAATGTTGTCAAACAG+AGG | + | chr1.3:56570166-56570185 | MS.gene43946:intron | 45.0% | |
| CTCTACTGCCACAAAAGGAT+TGG | + | chr1.3:56570698-56570717 | MS.gene43946:intron | 45.0% | |
| CTTGCTTGTATAGCATCCCA+AGG | - | chr1.3:56572023-56572042 | None:intergenic | 45.0% | |
| CTTGGGATGCTATACAAGCA+AGG | + | chr1.3:56572021-56572040 | MS.gene43946:intron | 45.0% | |
| GATGTTCTCTGATCCGAACA+TGG | + | chr1.3:56568814-56568833 | MS.gene43946:CDS | 45.0% | |
| GCTAGAACAGAGGTTGTTGT+TGG | + | chr1.3:56570743-56570762 | MS.gene43946:intron | 45.0% | |
| GGCAAGTTATGCTTAGAGCT+CGG | + | chr1.3:56568391-56568410 | MS.gene43946:intron | 45.0% | |
| GGTCTGTTGTTCGTTCCAAA+GGG | + | chr1.3:56568767-56568786 | MS.gene43946:CDS | 45.0% | |
| GTAAATGTCGAACTGTGACG+AGG | + | chr1.3:56572097-56572116 | MS.gene43946:intron | 45.0% | |
| GTGAGATATGGAGAAAGGGA+GGG | - | chr1.3:56571797-56571816 | None:intergenic | 45.0% | |
| TATAGCAGTGCTATCTGCTC+TGG | + | chr1.3:56570190-56570209 | MS.gene43946:intron | 45.0% | |
| TCAAACTAGTTGTGACCCCT+TGG | - | chr1.3:56569392-56569411 | None:intergenic | 45.0% | |
| TCAGAGAACATCTGTGCTTG+TGG | - | chr1.3:56568806-56568825 | None:intergenic | 45.0% | |
| TCCTCGTGAGATATGGAGAA+AGG | - | chr1.3:56571802-56571821 | None:intergenic | 45.0% | |
| TGAGATATGGAGAAAGGGAG+GGG | - | chr1.3:56571796-56571815 | None:intergenic | 45.0% | |
| TGGGATGCTATACAAGCAAG+GGG | + | chr1.3:56572023-56572042 | MS.gene43946:intron | 45.0% | |
| TGGTCTGTTGTTCGTTCCAA+AGG | + | chr1.3:56568766-56568785 | MS.gene43946:CDS | 45.0% | |
| TGTTCCTCTACTGCCACAAA+AGG | + | chr1.3:56570693-56570712 | MS.gene43946:intron | 45.0% | |
| TTAACTGCCAGAGCAACTGT+TGG | - | chr1.3:56570490-56570509 | None:intergenic | 45.0% | |
| TTGCAACACCGTAACATGAC+AGG | - | chr1.3:56569162-56569181 | None:intergenic | 45.0% | |
| TTGGCTCCTTGCTGAGAAAT+TGG | + | chr1.3:56571990-56572009 | MS.gene43946:intron | 45.0% | |
| ! | CAATCCTTTTGTGGCAGTAG+AGG | - | chr1.3:56570700-56570719 | None:intergenic | 45.0% |
| ! | GTAAAAATGGGGGGCACATA+GGG | - | chr1.3:56570589-56570608 | None:intergenic | 45.0% |
| ! | TATCGTGGCCAATCCTTTTG+TGG | - | chr1.3:56570709-56570728 | None:intergenic | 45.0% |
| !! | ATGCAAATGGGTGGTGGATT+CGG | + | chr1.3:56571668-56571687 | MS.gene43946:CDS | 45.0% |
| !!! | TTTAATTTTTTGTATATATA+CGG | + | chr1.3:56569189-56569208 | MS.gene43946:intron | 5.0% |
| ACCCTAACCAACAGTTGCTC+TGG | + | chr1.3:56570480-56570499 | MS.gene43946:intron | 50.0% | |
| AGATATGGAGAAAGGGAGGG+GGG | - | chr1.3:56571794-56571813 | None:intergenic | 50.0% | |
| AGCTCGGAATTTACGTGCTG+CGG | + | chr1.3:56568407-56568426 | MS.gene43946:CDS | 50.0% | |
| AGTTGCTCTGGCAGTTAACC+AGG | + | chr1.3:56570492-56570511 | MS.gene43946:intron | 50.0% | |
| CCCTTTCTCCATATCTCACG+AGG | + | chr1.3:56571798-56571817 | MS.gene43946:intron | 50.0% | |
| CGTGAGATATGGAGAAAGGG+AGG | - | chr1.3:56571798-56571817 | None:intergenic | 50.0% | |
| CTTCAACGAAGGAGTCTTCC+TGG | - | chr1.3:56570513-56570532 | None:intergenic | 50.0% | |
| GAGACGCAAAGATTGCTGGA+AGG | - | chr1.3:56570432-56570451 | None:intergenic | 50.0% | |
| GAGATATGGAGAAAGGGAGG+GGG | - | chr1.3:56571795-56571814 | None:intergenic | 50.0% | |
| GCTATACAAGCAAGGGGTTC+AGG | + | chr1.3:56572029-56572048 | MS.gene43946:intron | 50.0% | |
| GGATCATGTTTGGTTGCCGT+TGG | + | chr1.3:56570086-56570105 | MS.gene43946:intron | 50.0% | |
| GGGCACGAAAAGCCTTAGAA+GGG | - | chr1.3:56568443-56568462 | None:intergenic | 50.0% | |
| GTGCTGCCATAGCCTCTATT+TGG | - | chr1.3:56570276-56570295 | None:intergenic | 50.0% | |
| TCTCTTGTGTGTGCAGACGT+TGG | + | chr1.3:56570448-56570467 | MS.gene43946:intron | 50.0% | |
| TGCTATCTGCTCTGGCATAG+CGG | + | chr1.3:56570198-56570217 | MS.gene43946:intron | 50.0% | |
| TGGCAGTAGAGGAACAGAGT+TGG | - | chr1.3:56570689-56570708 | None:intergenic | 50.0% | |
| TTGGGAAGAACGCAGAAGCT+TGG | - | chr1.3:56568255-56568274 | None:intergenic | 50.0% | |
| ! | AACTGTTGGTTAGGGTGGCT+GGG | - | chr1.3:56570476-56570495 | None:intergenic | 50.0% |
| ! | AGAGCAACTGTTGGTTAGGG+TGG | - | chr1.3:56570481-56570500 | None:intergenic | 50.0% |
| ! | CGTAAAAATGGGGGGCACAT+AGG | - | chr1.3:56570590-56570609 | None:intergenic | 50.0% |
| ! | GCCAGAGCAACTGTTGGTTA+GGG | - | chr1.3:56570484-56570503 | None:intergenic | 50.0% |
| ! | GTAGAGGAACAGAGTTGGTC+TGG | - | chr1.3:56570684-56570703 | None:intergenic | 50.0% |
| ! | TGCCAGAGCAACTGTTGGTT+AGG | - | chr1.3:56570485-56570504 | None:intergenic | 50.0% |
| ACAAGCAAGGGGTTCAGGGT+AGG | + | chr1.3:56572034-56572053 | MS.gene43946:intron | 55.0% | |
| AGGAAGGGAAGAAGGAAGGG+GGG | - | chr1.3:56570374-56570393 | None:intergenic | 55.0% | |
| CATCTGTGCTTGTGGGTTCG+TGG | - | chr1.3:56568798-56568817 | None:intergenic | 55.0% | |
| CGGAGGAAGGGAAGAAGGAA+GGG | - | chr1.3:56570377-56570396 | None:intergenic | 55.0% | |
| CGGGCACGAAAAGCCTTAGA+AGG | - | chr1.3:56568444-56568463 | None:intergenic | 55.0% | |
| CTCTGATCCGAACATGGCCA+TGG | + | chr1.3:56568820-56568839 | MS.gene43946:CDS | 55.0% | |
| GAGGAAGGGAAGAAGGAAGG+GGG | - | chr1.3:56570375-56570394 | None:intergenic | 55.0% | |
| GGAGGAAGGGAAGAAGGAAG+GGG | - | chr1.3:56570376-56570395 | None:intergenic | 55.0% | |
| TGGCAAGGCCCAGTCATGTT+GGG | - | chr1.3:56572224-56572243 | None:intergenic | 55.0% | |
| TTGGCAAGGCCCAGTCATGT+TGG | - | chr1.3:56572225-56572244 | None:intergenic | 55.0% | |
| ! | AAAATGGGGGGCACATAGGG+AGG | - | chr1.3:56570586-56570605 | None:intergenic | 55.0% |
| ! | AAATGGGGGGCACATAGGGA+GGG | - | chr1.3:56570585-56570604 | None:intergenic | 55.0% |
| ! | CAACTGTTGGTTAGGGTGGC+TGG | - | chr1.3:56570477-56570496 | None:intergenic | 55.0% |
| AAGTGGTGCAGGTGCAGCCT+TGG | - | chr1.3:56570548-56570567 | None:intergenic | 60.0% | |
| AGTGGTGCAGGTGCAGCCTT+GGG | - | chr1.3:56570547-56570566 | None:intergenic | 60.0% | |
| GCGGAGGAAGGGAAGAAGGA+AGG | - | chr1.3:56570378-56570397 | None:intergenic | 60.0% | |
| GCTATGTCAGCAGTCGCTCC+TGG | + | chr1.3:56571349-56571368 | MS.gene43946:CDS | 60.0% | |
| GTGCTTGTGGGTTCGTGGCT+TGG | - | chr1.3:56568793-56568812 | None:intergenic | 60.0% | |
| TGCTGGAAGGAGACTCGCAG+CGG | - | chr1.3:56570419-56570438 | None:intergenic | 60.0% | |
| ! | AATGGGGGGCACATAGGGAG+GGG | - | chr1.3:56570584-56570603 | None:intergenic | 60.0% |
| AAGGAGACTCGCAGCGGCCA+GGG | - | chr1.3:56570413-56570432 | None:intergenic | 65.0% | |
| ACATAGGGAGGGGGATGGGG+AGG | - | chr1.3:56570574-56570593 | None:intergenic | 65.0% | |
| ACTCGCAGCGGCCAGGGAAA+GGG | - | chr1.3:56570407-56570426 | None:intergenic | 65.0% | |
| ATAGGGAGGGGGATGGGGAG+GGG | - | chr1.3:56570572-56570591 | None:intergenic | 65.0% | |
| CATAGGGAGGGGGATGGGGA+GGG | - | chr1.3:56570573-56570592 | None:intergenic | 65.0% | |
| GGCACATAGGGAGGGGGATG+GGG | - | chr1.3:56570577-56570596 | None:intergenic | 65.0% | |
| GGGCACATAGGGAGGGGGAT+GGG | - | chr1.3:56570578-56570597 | None:intergenic | 65.0% | |
| GTGGTGCAGGTGCAGCCTTG+GGG | - | chr1.3:56570546-56570565 | None:intergenic | 65.0% | |
| ! | ATGGGGGGCACATAGGGAGG+GGG | - | chr1.3:56570583-56570602 | None:intergenic | 65.0% |
| ! | GGGTTCGTGGCTTGGCCCTT+TGG | - | chr1.3:56568785-56568804 | None:intergenic | 65.0% |
| AGCGGCCAGGGAAAGGGGTG+CGG | - | chr1.3:56570401-56570420 | None:intergenic | 70.0% | |
| CTCGCAGCGGCCAGGGAAAG+GGG | - | chr1.3:56570406-56570425 | None:intergenic | 70.0% | |
| GAAGGAGACTCGCAGCGGCC+AGG | - | chr1.3:56570414-56570433 | None:intergenic | 70.0% | |
| GACTCGCAGCGGCCAGGGAA+AGG | - | chr1.3:56570408-56570427 | None:intergenic | 70.0% | |
| GCGGGCGGAGGAAGGGAAGA+AGG | - | chr1.3:56570382-56570401 | None:intergenic | 70.0% | |
| GGGGCACATAGGGAGGGGGA+TGG | - | chr1.3:56570579-56570598 | None:intergenic | 70.0% | |
| TAGGGAGGGGGATGGGGAGG+GGG | - | chr1.3:56570571-56570590 | None:intergenic | 70.0% | |
| TGGGGAGGGGGAAGTGGTGC+AGG | - | chr1.3:56570559-56570578 | None:intergenic | 70.0% | |
| ! | AAAGGGGTGCGGGCGGAGGA+AGG | - | chr1.3:56570390-56570409 | None:intergenic | 70.0% |
| ! | AAGGGGTGCGGGCGGAGGAA+GGG | - | chr1.3:56570389-56570408 | None:intergenic | 70.0% |
| GGGGGATGGGGAGGGGGAAG+TGG | - | chr1.3:56570565-56570584 | None:intergenic | 75.0% | |
| TCCGCCCGCACCCCTTTCCC+TGG | + | chr1.3:56570393-56570412 | MS.gene43946:intron | 75.0% | |
| ! | AGGGAAAGGGGTGCGGGCGG+AGG | - | chr1.3:56570394-56570413 | None:intergenic | 75.0% |
| ! | GCCAGGGAAAGGGGTGCGGG+CGG | - | chr1.3:56570397-56570416 | None:intergenic | 75.0% |
| ! | GCGGCCAGGGAAAGGGGTGC+GGG | - | chr1.3:56570400-56570419 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 56568152 | 56572291 | 56568152 | ID=MS.gene43946 |
| chr1.3 | mRNA | 56568152 | 56572291 | 56568152 | ID=MS.gene43946.t1;Parent=MS.gene43946 |
| chr1.3 | exon | 56568152 | 56568303 | 56568152 | ID=MS.gene43946.t1.exon1;Parent=MS.gene43946.t1 |
| chr1.3 | CDS | 56568152 | 56568303 | 56568152 | ID=cds.MS.gene43946.t1;Parent=MS.gene43946.t1 |
| chr1.3 | exon | 56568392 | 56568485 | 56568392 | ID=MS.gene43946.t1.exon2;Parent=MS.gene43946.t1 |
| chr1.3 | CDS | 56568392 | 56568485 | 56568392 | ID=cds.MS.gene43946.t1;Parent=MS.gene43946.t1 |
| chr1.3 | exon | 56568761 | 56568880 | 56568761 | ID=MS.gene43946.t1.exon3;Parent=MS.gene43946.t1 |
| chr1.3 | CDS | 56568761 | 56568880 | 56568761 | ID=cds.MS.gene43946.t1;Parent=MS.gene43946.t1 |
| chr1.3 | exon | 56569012 | 56569060 | 56569012 | ID=MS.gene43946.t1.exon4;Parent=MS.gene43946.t1 |
| chr1.3 | CDS | 56569012 | 56569060 | 56569012 | ID=cds.MS.gene43946.t1;Parent=MS.gene43946.t1 |
| chr1.3 | exon | 56571271 | 56571370 | 56571271 | ID=MS.gene43946.t1.exon5;Parent=MS.gene43946.t1 |
| chr1.3 | CDS | 56571271 | 56571370 | 56571271 | ID=cds.MS.gene43946.t1;Parent=MS.gene43946.t1 |
| chr1.3 | exon | 56571443 | 56571504 | 56571443 | ID=MS.gene43946.t1.exon6;Parent=MS.gene43946.t1 |
| chr1.3 | CDS | 56571443 | 56571504 | 56571443 | ID=cds.MS.gene43946.t1;Parent=MS.gene43946.t1 |
| chr1.3 | exon | 56571645 | 56571706 | 56571645 | ID=MS.gene43946.t1.exon7;Parent=MS.gene43946.t1 |
| chr1.3 | CDS | 56571645 | 56571706 | 56571645 | ID=cds.MS.gene43946.t1;Parent=MS.gene43946.t1 |
| chr1.3 | exon | 56572187 | 56572291 | 56572187 | ID=MS.gene43946.t1.exon8;Parent=MS.gene43946.t1 |
| chr1.3 | CDS | 56572187 | 56572291 | 56572187 | ID=cds.MS.gene43946.t1;Parent=MS.gene43946.t1 |
| Gene Sequence |
| Protein sequence |
