Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44390.t1 | XP_003625096.2 | 93.4 | 289 | 2 | 1 | 52 | 323 | 103 | 391 | 1.30E-143 | 519.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44390.t1 | Q8RY99 | 58.4 | 281 | 99 | 2 | 52 | 315 | 100 | 379 | 6.0e-84 | 312.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44390.t1 | G7KSL4 | 93.4 | 289 | 2 | 1 | 52 | 323 | 103 | 391 | 9.6e-144 | 519.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050114 | MS.gene44390 | 0.841238 | 5.36E-58 | -1.69E-46 |
| MS.gene050317 | MS.gene44390 | 0.803192 | 3.92E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene44390 | -0.815967 | 7.05E-52 | -1.69E-46 |
| MS.gene050762 | MS.gene44390 | 0.81235 | 4.43E-51 | -1.69E-46 |
| MS.gene050763 | MS.gene44390 | 0.816078 | 6.66E-52 | -1.69E-46 |
| MS.gene050815 | MS.gene44390 | 0.809421 | 1.91E-50 | -1.69E-46 |
| MS.gene051245 | MS.gene44390 | 0.802768 | 4.80E-49 | -1.69E-46 |
| MS.gene051748 | MS.gene44390 | 0.803258 | 3.80E-49 | -1.69E-46 |
| MS.gene052302 | MS.gene44390 | 0.805129 | 1.55E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene44390 | 0.818841 | 1.59E-52 | -1.69E-46 |
| MS.gene053381 | MS.gene44390 | 0.815689 | 8.13E-52 | -1.69E-46 |
| MS.gene055441 | MS.gene44390 | 0.801377 | 9.27E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene44390 | -0.806733 | 7.13E-50 | -1.69E-46 |
| MS.gene056400 | MS.gene44390 | 0.801117 | 1.05E-48 | -1.69E-46 |
| MS.gene056432 | MS.gene44390 | 0.804417 | 2.18E-49 | -1.69E-46 |
| MS.gene056552 | MS.gene44390 | 0.820955 | 5.22E-53 | -1.69E-46 |
| MS.gene057057 | MS.gene44390 | 0.816643 | 4.98E-52 | -1.69E-46 |
| MS.gene057140 | MS.gene44390 | 0.812356 | 4.42E-51 | -1.69E-46 |
| MS.gene058084 | MS.gene44390 | 0.813715 | 2.22E-51 | -1.69E-46 |
| MS.gene058182 | MS.gene44390 | 0.827771 | 1.30E-54 | -1.69E-46 |
| MS.gene058646 | MS.gene44390 | 0.804569 | 2.03E-49 | -1.69E-46 |
| MS.gene058654 | MS.gene44390 | 0.808159 | 3.55E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene44390 | 0.825479 | 4.58E-54 | -1.69E-46 |
| MS.gene059249 | MS.gene44390 | 0.801764 | 7.72E-49 | -1.69E-46 |
| MS.gene059898 | MS.gene44390 | 0.8067 | 7.24E-50 | -1.69E-46 |
| MS.gene060084 | MS.gene44390 | 0.818595 | 1.81E-52 | -1.69E-46 |
| MS.gene06010 | MS.gene44390 | 0.803433 | 3.49E-49 | -1.69E-46 |
| MS.gene060465 | MS.gene44390 | 0.806163 | 9.40E-50 | -1.69E-46 |
| MS.gene060869 | MS.gene44390 | 0.823027 | 1.73E-53 | -1.69E-46 |
| MS.gene060870 | MS.gene44390 | 0.822864 | 1.89E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44390.t1 | MTR_7g090880 | 92.784 | 291 | 4 | 1 | 50 | 323 | 101 | 391 | 0.0 | 545 |
| MS.gene44390.t1 | MTR_2g039670 | 49.296 | 284 | 124 | 4 | 47 | 312 | 96 | 377 | 5.23e-85 | 262 |
| MS.gene44390.t1 | MTR_4g126040 | 50.169 | 295 | 127 | 4 | 47 | 323 | 90 | 382 | 9.85e-82 | 254 |
| MS.gene44390.t1 | MTR_7g090860 | 52.500 | 240 | 59 | 8 | 79 | 312 | 337 | 527 | 4.53e-56 | 190 |
| MS.gene44390.t1 | MTR_8g461220 | 35.540 | 287 | 158 | 7 | 49 | 314 | 101 | 381 | 4.30e-44 | 156 |
| MS.gene44390.t1 | MTR_7g090820 | 73.333 | 45 | 11 | 1 | 81 | 124 | 298 | 342 | 2.58e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44390.t1 | AT3G10140 | 57.746 | 284 | 102 | 2 | 49 | 315 | 97 | 379 | 1.38e-100 | 301 |
| MS.gene44390.t1 | AT2G19490 | 49.495 | 297 | 122 | 5 | 47 | 317 | 91 | 385 | 9.97e-84 | 259 |
| MS.gene44390.t1 | AT3G32920 | 57.436 | 195 | 73 | 6 | 47 | 238 | 13 | 200 | 2.65e-53 | 174 |
| MS.gene44390.t1 | AT1G79050 | 36.395 | 294 | 164 | 5 | 49 | 323 | 117 | 406 | 6.23e-45 | 159 |
| MS.gene44390.t1 | AT3G32920 | 61.379 | 145 | 52 | 4 | 47 | 188 | 13 | 156 | 1.66e-41 | 142 |
| MS.gene44390.t1 | AT1G79050 | 40.000 | 210 | 105 | 3 | 49 | 241 | 117 | 322 | 2.06e-39 | 142 |
| MS.gene44390.t1 | AT3G32920 | 59.677 | 124 | 46 | 4 | 47 | 167 | 13 | 135 | 1.36e-29 | 112 |
| MS.gene44390.t1 | AT3G32920 | 59.677 | 124 | 46 | 4 | 47 | 167 | 13 | 135 | 1.36e-29 | 112 |
| MS.gene44390.t1 | AT3G32920 | 61.333 | 75 | 27 | 2 | 94 | 167 | 9 | 82 | 2.27e-13 | 67.0 |
Find 58 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTAGGATTGTTGAAATTTA+TGG | 0.128020 | 7.3:+18198375 | MS.gene44390:CDS |
| AAGCTTCCCTTTCCCATTTC+CGG | 0.187537 | 7.3:+18196639 | MS.gene44390:CDS |
| ATTGATCAAGTTCGCATTTC+GGG | 0.189519 | 7.3:-18200087 | None:intergenic |
| GCAGCTTCTCTACTAGTAAA+AGG | 0.322200 | 7.3:-18200837 | None:intergenic |
| AGATTTAGTCCAAAAGCATT+TGG | 0.322232 | 7.3:+18200332 | MS.gene44390:CDS |
| GATTTAGTCCAAAAGCATTT+GGG | 0.325462 | 7.3:+18200333 | MS.gene44390:CDS |
| AATCAAAGACCTCTGATTCT+TGG | 0.327550 | 7.3:-18200755 | None:intergenic |
| AATTGATCAAGTTCGCATTT+CGG | 0.336745 | 7.3:-18200088 | None:intergenic |
| CTTGATATAGCTCTTGGAAT+TGG | 0.341055 | 7.3:+18198040 | MS.gene44390:CDS |
| AGAATCAGAGGTCTTTGATT+TGG | 0.344296 | 7.3:+18200758 | MS.gene44390:CDS |
| GCTGAACTGGGTATCAAGTT+TGG | 0.348562 | 7.3:+18200720 | MS.gene44390:CDS |
| CCTTTCACTTGTGGAGTCAA+TGG | 0.382583 | 7.3:+18199407 | MS.gene44390:CDS |
| AAATGCGAACTTGATCAATT+AGG | 0.383682 | 7.3:+18200091 | MS.gene44390:CDS |
| TTTGATTTGGCTTGTGAACA+TGG | 0.407991 | 7.3:+18200771 | MS.gene44390:CDS |
| TTGAAGCTTGATATAGCTCT+TGG | 0.416783 | 7.3:+18198034 | MS.gene44390:CDS |
| GATTTGTGACAAGTTAGTTA+TGG | 0.423315 | 7.3:+18200887 | MS.gene44390:CDS |
| TCTCCTCCACCCTTCGCGCC+AGG | 0.426211 | 7.3:+18196720 | MS.gene44390:CDS |
| CATCTGGTGTTTCAGGTTGA+GGG | 0.426869 | 7.3:+18200639 | MS.gene44390:intron |
| CGTTTGCGACTTTCAAGAAT+GGG | 0.430058 | 7.3:+18200419 | MS.gene44390:CDS |
| AAGAGCTATATCAAGCTTCA+AGG | 0.445371 | 7.3:-18198032 | None:intergenic |
| GAACCTGGCGCGAAGGGTGG+AGG | 0.455783 | 7.3:-18196723 | None:intergenic |
| CTTTCACTTGTGGAGTCAAT+GGG | 0.464147 | 7.3:+18199408 | MS.gene44390:CDS |
| AATCAGGATTAGAGATAAGA+AGG | 0.474040 | 7.3:-18199446 | None:intergenic |
| GATATAGCTCTTGGAATTGG+AGG | 0.476573 | 7.3:+18198043 | MS.gene44390:CDS |
| GTAAAGGCCTTGCAAGGAGA+TGG | 0.484472 | 7.3:-18196687 | None:intergenic |
| GAGGGAAACTACTTCATTGA+AGG | 0.484832 | 7.3:+18200810 | MS.gene44390:CDS |
| TCGTTTGCGACTTTCAAGAA+TGG | 0.488748 | 7.3:+18200418 | MS.gene44390:CDS |
| TGCATTAGACCTTTCACTTG+TGG | 0.489679 | 7.3:+18199398 | MS.gene44390:CDS |
| CTGGGTATCAAGTTTGGAAG+AGG | 0.509214 | 7.3:+18200726 | MS.gene44390:CDS |
| CGAGAGGAACCTGGCGCGAA+GGG | 0.514139 | 7.3:-18196729 | None:intergenic |
| TTGATTTGGCTTGTGAACAT+GGG | 0.520406 | 7.3:+18200772 | MS.gene44390:CDS |
| AAAGGGAAGCTTTAGTGCGC+TGG | 0.527659 | 7.3:-18196628 | None:intergenic |
| TGCTGAAAATTTGTTGAGCA+TGG | 0.528054 | 7.3:+18199470 | MS.gene44390:CDS |
| CTCGTCTCCATCTCCTTGCA+AGG | 0.531097 | 7.3:+18196680 | MS.gene44390:CDS |
| GCGCGAAGGGTGGAGGAGAG+AGG | 0.538376 | 7.3:-18196716 | None:intergenic |
| AATTAAGAGAGTTTGGGAGC+GGG | 0.550676 | 7.3:-18200185 | None:intergenic |
| AAATTAAGAGAGTTTGGGAG+CGG | 0.553612 | 7.3:-18200186 | None:intergenic |
| GAGGAACCTGGCGCGAAGGG+TGG | 0.558392 | 7.3:-18196726 | None:intergenic |
| ATTTATGGACGAGAAGCAGC+TGG | 0.567692 | 7.3:+18198390 | MS.gene44390:CDS |
| GTTTCAGGTTGAGGGTATCA+CGG | 0.569224 | 7.3:+18200647 | MS.gene44390:intron |
| TGGGCTCATTATGAAAGATG+AGG | 0.570768 | 7.3:+18200791 | MS.gene44390:CDS |
| ATGGAAGAGGTCACTTGTGG+TGG | 0.571209 | 7.3:+18200368 | MS.gene44390:CDS |
| ACGAGAGGAACCTGGCGCGA+AGG | 0.572073 | 7.3:-18196730 | None:intergenic |
| AGGGAAACTACTTCATTGAA+GGG | 0.576462 | 7.3:+18200811 | MS.gene44390:CDS |
| ATTTAGTCCAAAAGCATTTG+GGG | 0.585174 | 7.3:+18200334 | MS.gene44390:CDS |
| CCACAAGTGACCTCTTCCAT+AGG | 0.599800 | 7.3:-18200365 | None:intergenic |
| GGGCTCATTATGAAAGATGA+GGG | 0.601099 | 7.3:+18200792 | MS.gene44390:CDS |
| AGGAGAGAGGAAGAGAGTAA+AGG | 0.602153 | 7.3:-18196703 | None:intergenic |
| CCATTGACTCCACAAGTGAA+AGG | 0.606787 | 7.3:-18199407 | None:intergenic |
| TATCACGGTCTGTGCGCAAG+TGG | 0.613306 | 7.3:+18200662 | MS.gene44390:CDS |
| AAGAGAGTAAAGGCCTTGCA+AGG | 0.619155 | 7.3:-18196693 | None:intergenic |
| GAATAATGACTCAAGCACTA+CGG | 0.643600 | 7.3:+18200143 | MS.gene44390:CDS |
| GGGACGCGGACCTATGGAAG+AGG | 0.646600 | 7.3:+18200355 | MS.gene44390:CDS |
| TGGAGCTGTAGACGTGATTG+TGG | 0.653253 | 7.3:+18199512 | MS.gene44390:CDS |
| TGGAATTGGAGGATTACCAA+AGG | 0.653796 | 7.3:+18198054 | MS.gene44390:CDS |
| CCTATGGAAGAGGTCACTTG+TGG | 0.658549 | 7.3:+18200365 | MS.gene44390:CDS |
| TTTAGTCCAAAAGCATTTGG+GGG | 0.660428 | 7.3:+18200335 | MS.gene44390:CDS |
| GGGAAACTACTTCATTGAAG+GGG | 0.678034 | 7.3:+18200812 | MS.gene44390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAGAAAATATAAATAGT+TGG | - | chr7.3:18199708-18199727 | None:intergenic | 10.0% |
| !! | ATGGCTATTAAATTATTAAT+AGG | + | chr7.3:18198541-18198560 | MS.gene44390:intron | 15.0% |
| !!! | AATATTTTAGAGTATCTTAA+AGG | - | chr7.3:18199944-18199963 | None:intergenic | 15.0% |
| !!! | AATTTTTGGCTAAAAATAAA+AGG | + | chr7.3:18200865-18200884 | MS.gene44390:CDS | 15.0% |
| !!! | TATGTTTAATTTCTTTTAAG+TGG | + | chr7.3:18198866-18198885 | MS.gene44390:intron | 15.0% |
| !! | AAAATAATCATTTCAGAGAT+AGG | - | chr7.3:18197557-18197576 | None:intergenic | 20.0% |
| !! | AAATAATCATTTCAGAGATA+GGG | - | chr7.3:18197556-18197575 | None:intergenic | 20.0% |
| !! | AACAAAAATTAAGAGAGTTT+GGG | - | chr7.3:18200194-18200213 | None:intergenic | 20.0% |
| !! | AGCTTCTTTAATAATTTGAA+GGG | - | chr7.3:18198431-18198450 | None:intergenic | 20.0% |
| !! | ATAAATTCTATTCATTCTGT+TGG | + | chr7.3:18199344-18199363 | MS.gene44390:intron | 20.0% |
| !! | ATTGATAAAAACTGAAGATA+AGG | + | chr7.3:18200442-18200461 | MS.gene44390:CDS | 20.0% |
| !! | CAAAATAATTACTGATATGT+TGG | - | chr7.3:18198966-18198985 | None:intergenic | 20.0% |
| !! | GATCATTTCTTAAAATTGTA+GGG | + | chr7.3:18199760-18199779 | MS.gene44390:intron | 20.0% |
| !! | GTATTAACTGTTAAATATCT+TGG | - | chr7.3:18199999-18200018 | None:intergenic | 20.0% |
| !! | TAAAAGAATTGATACAAGAT+AGG | - | chr7.3:18200608-18200627 | None:intergenic | 20.0% |
| !! | TAACAAAAATTAAGAGAGTT+TGG | - | chr7.3:18200195-18200214 | None:intergenic | 20.0% |
| !! | TAAGAAATACTTGATAAGTA+TGG | + | chr7.3:18199060-18199079 | MS.gene44390:intron | 20.0% |
| !! | TAGAATTTATTGAAATTGAC+AGG | - | chr7.3:18199334-18199353 | None:intergenic | 20.0% |
| !! | TCTTGATTGTAAATAAGTAA+GGG | + | chr7.3:18199881-18199900 | MS.gene44390:intron | 20.0% |
| !! | TGATCATTTCTTAAAATTGT+AGG | + | chr7.3:18199759-18199778 | MS.gene44390:intron | 20.0% |
| !! | TGATTTGATGTGATTAAATA+TGG | + | chr7.3:18199833-18199852 | MS.gene44390:intron | 20.0% |
| !! | TTCTTGATTGTAAATAAGTA+AGG | + | chr7.3:18199880-18199899 | MS.gene44390:intron | 20.0% |
| !! | TTGTACTTCAAATATGAAAA+TGG | + | chr7.3:18198522-18198541 | MS.gene44390:intron | 20.0% |
| !! | TTGTTAATTTATGCTACATT+CGG | - | chr7.3:18198256-18198275 | None:intergenic | 20.0% |
| !!! | AAGGAATTTTACAAAAATGT+TGG | - | chr7.3:18199587-18199606 | None:intergenic | 20.0% |
| !!! | GAACTATAAATTATTTCTTG+AGG | + | chr7.3:18200501-18200520 | MS.gene44390:intron | 20.0% |
| !!! | TCTCTTAATTTTTGTTAATC+AGG | + | chr7.3:18200198-18200217 | MS.gene44390:CDS | 20.0% |
| ! | AAAGAATAAGATGATTCCTT+CGG | - | chr7.3:18197752-18197771 | None:intergenic | 25.0% |
| ! | AAGAACTTGGAATTTCTATA+TGG | - | chr7.3:18198926-18198945 | None:intergenic | 25.0% |
| ! | AAGCAATAATAATGAACTGT+CGG | + | chr7.3:18198610-18198629 | MS.gene44390:intron | 25.0% |
| ! | ACTAAGATACAAAAGAAAAG+TGG | - | chr7.3:18200545-18200564 | None:intergenic | 25.0% |
| ! | ACTAATCTACTTCCAAATAA+TGG | - | chr7.3:18199115-18199134 | None:intergenic | 25.0% |
| ! | AGGGAATTAATCATGAAATA+TGG | + | chr7.3:18199900-18199919 | MS.gene44390:intron | 25.0% |
| ! | ATTAAACATAACCATGCAAT+AGG | - | chr7.3:18198856-18198875 | None:intergenic | 25.0% |
| ! | CTTTAATACTTGTAGTTATC+AGG | - | chr7.3:18197210-18197229 | None:intergenic | 25.0% |
| ! | GAGCTTCTTTAATAATTTGA+AGG | - | chr7.3:18198432-18198451 | None:intergenic | 25.0% |
| ! | GTCTACAAACAAAAAAGAAA+AGG | + | chr7.3:18197113-18197132 | MS.gene44390:intron | 25.0% |
| ! | TAAGTATGGAAAATGAATAG+AGG | + | chr7.3:18199074-18199093 | MS.gene44390:intron | 25.0% |
| ! | TACAAAAGAAAATGAACTAC+TGG | - | chr7.3:18197497-18197516 | None:intergenic | 25.0% |
| ! | TAGTTCAGTCTATAACTATA+AGG | - | chr7.3:18197004-18197023 | None:intergenic | 25.0% |
| ! | TATAAGGTTAACTACATCAA+AGG | - | chr7.3:18196988-18197007 | None:intergenic | 25.0% |
| ! | TCTATTATTAGAACAAGTAG+AGG | - | chr7.3:18199860-18199879 | None:intergenic | 25.0% |
| ! | TGTTAAATCTAACAGTTTCT+TGG | - | chr7.3:18200285-18200304 | None:intergenic | 25.0% |
| ! | TGTTCTTTCTCAAAAAGTAA+TGG | + | chr7.3:18196962-18196981 | MS.gene44390:intron | 25.0% |
| ! | TTATAAGCATCTCCATTATT+TGG | + | chr7.3:18199100-18199119 | MS.gene44390:intron | 25.0% |
| !! | AATCCACAAATTTGTTCAAT+TGG | - | chr7.3:18196874-18196893 | None:intergenic | 25.0% |
| !! | ATTAGAGATAAGAAGGTTTT+TGG | - | chr7.3:18199442-18199461 | None:intergenic | 25.0% |
| !! | TAAGATGATTTTGTAATTCC+AGG | + | chr7.3:18200051-18200070 | MS.gene44390:intron | 25.0% |
| !! | TGGAGGTACATATTATTATT+TGG | + | chr7.3:18198458-18198477 | MS.gene44390:intron | 25.0% |
| !! | TTCTTAAAATTGTAGGGTTT+TGG | + | chr7.3:18199766-18199785 | MS.gene44390:intron | 25.0% |
| !! | TTTCTTTATTTATGCTCTCT+TGG | + | chr7.3:18199719-18199738 | MS.gene44390:intron | 25.0% |
| !!! | AAAAATAACGCACTTTGTTT+TGG | + | chr7.3:18197914-18197933 | MS.gene44390:intron | 25.0% |
| !!! | AATTTATAGTTCTGAATCAG+AGG | - | chr7.3:18200493-18200512 | None:intergenic | 25.0% |
| !!! | ATGACTATTTTTGAACAGAA+TGG | + | chr7.3:18197599-18197618 | MS.gene44390:intron | 25.0% |
| !!! | ATGTAACTTTTTAGCACTTT+TGG | - | chr7.3:18197239-18197258 | None:intergenic | 25.0% |
| !!! | GTAATTATTTTGACTGTAGT+CGG | + | chr7.3:18198974-18198993 | MS.gene44390:intron | 25.0% |
| !!! | TGTTTGATTTTCAAGATTAG+AGG | + | chr7.3:18199633-18199652 | MS.gene44390:intron | 25.0% |
| AAATGCGAACTTGATCAATT+AGG | + | chr7.3:18200091-18200110 | MS.gene44390:CDS | 30.0% | |
| AACAATGAATGAATAACGAG+AGG | - | chr7.3:18196748-18196767 | None:intergenic | 30.0% | |
| AATCAGGATTAGAGATAAGA+AGG | - | chr7.3:18199449-18199468 | None:intergenic | 30.0% | |
| AATTGATCAAGTTCGCATTT+CGG | - | chr7.3:18200091-18200110 | None:intergenic | 30.0% | |
| ACGATACAATGATGATATGA+TGG | + | chr7.3:18199966-18199985 | MS.gene44390:intron | 30.0% | |
| ATACCAAACAACGATCTAAA+GGG | - | chr7.3:18198112-18198131 | None:intergenic | 30.0% | |
| CAAAAATGACATCAAGAACT+TGG | - | chr7.3:18198939-18198958 | None:intergenic | 30.0% | |
| CAATAGTTTCTCTCATATAC+AGG | + | chr7.3:18200307-18200326 | MS.gene44390:intron | 30.0% | |
| CACACAATTAACTTAATGCT+TGG | + | chr7.3:18198793-18198812 | MS.gene44390:intron | 30.0% | |
| CTTCCAATTGAACAAATTTG+TGG | + | chr7.3:18196868-18196887 | MS.gene44390:intron | 30.0% | |
| GACAGTTCATTATTATTGCT+TGG | - | chr7.3:18198611-18198630 | None:intergenic | 30.0% | |
| GATTTAGAGAATTAATGACC+AGG | + | chr7.3:18197621-18197640 | MS.gene44390:intron | 30.0% | |
| GATTTGTGACAAGTTAGTTA+TGG | + | chr7.3:18200887-18200906 | MS.gene44390:CDS | 30.0% | |
| GGTAGGATTGTTGAAATTTA+TGG | + | chr7.3:18198375-18198394 | MS.gene44390:CDS | 30.0% | |
| GTTGATACACTAACAAAAAG+TGG | + | chr7.3:18199492-18199511 | MS.gene44390:CDS | 30.0% | |
| TAAAAACTGAAGATAAGGTG+TGG | + | chr7.3:18200447-18200466 | MS.gene44390:intron | 30.0% | |
| TAATGAGAATTCCTATTGCA+TGG | + | chr7.3:18198842-18198861 | MS.gene44390:intron | 30.0% | |
| TAGATCGTTGTTTGGTATAT+CGG | + | chr7.3:18198114-18198133 | MS.gene44390:intron | 30.0% | |
| TATACCAAACAACGATCTAA+AGG | - | chr7.3:18198113-18198132 | None:intergenic | 30.0% | |
| TATTAAAGAAGCTCAAAAGC+TGG | + | chr7.3:18198438-18198457 | MS.gene44390:intron | 30.0% | |
| TGTGGATATGTATTAAGTGA+AGG | - | chr7.3:18198319-18198338 | None:intergenic | 30.0% | |
| TTCAAATGTGAGGCATATTA+AGG | - | chr7.3:18198347-18198366 | None:intergenic | 30.0% | |
| TTCACTTAATACATATCCAC+AGG | + | chr7.3:18198318-18198337 | MS.gene44390:intron | 30.0% | |
| TTGTGGTGATTATATGCATT+TGG | + | chr7.3:18197446-18197465 | MS.gene44390:intron | 30.0% | |
| TTTACTATGAATCTTGCATG+CGG | - | chr7.3:18199301-18199320 | None:intergenic | 30.0% | |
| ! | AACAAATTTTCAGCACAATC+AGG | - | chr7.3:18199465-18199484 | None:intergenic | 30.0% |
| ! | AATTGCATATTTTCCGGAAA+TGG | - | chr7.3:18196655-18196674 | None:intergenic | 30.0% |
| ! | ATTGCATATTTTCCGGAAAT+GGG | - | chr7.3:18196654-18196673 | None:intergenic | 30.0% |
| ! | CCTCACATTTGAATGTTTTA+GGG | + | chr7.3:18198354-18198373 | MS.gene44390:intron | 30.0% |
| ! | GTCGAAAATTGCATATTTTC+CGG | - | chr7.3:18196661-18196680 | None:intergenic | 30.0% |
| ! | TGAAAATCAAACACTGCTTT+TGG | - | chr7.3:18199626-18199645 | None:intergenic | 30.0% |
| ! | TTCTAGAAAGAGATAGTATC+AGG | + | chr7.3:18197335-18197354 | MS.gene44390:intron | 30.0% |
| !! | AAAATTGTAGGGTTTTGGTA+GGG | + | chr7.3:18199771-18199790 | MS.gene44390:intron | 30.0% |
| !! | AGATTTAGTCCAAAAGCATT+TGG | + | chr7.3:18200332-18200351 | MS.gene44390:CDS | 30.0% |
| !! | ATTTAGTCCAAAAGCATTTG+GGG | + | chr7.3:18200334-18200353 | MS.gene44390:CDS | 30.0% |
| !! | CTTTTAAGTGGAAAATGTAC+AGG | + | chr7.3:18198878-18198897 | MS.gene44390:intron | 30.0% |
| !! | GATTTAGTCCAAAAGCATTT+GGG | + | chr7.3:18200333-18200352 | MS.gene44390:CDS | 30.0% |
| !! | TAAAATTGTAGGGTTTTGGT+AGG | + | chr7.3:18199770-18199789 | MS.gene44390:intron | 30.0% |
| !!! | ACATTTGAATGTTTTAGGGT+AGG | + | chr7.3:18198358-18198377 | MS.gene44390:intron | 30.0% |
| !!! | ATGTGAGTTTTGGTTCTTTT+AGG | + | chr7.3:18196933-18196952 | MS.gene44390:intron | 30.0% |
| !!! | ATGTTGCACTTTTTTTCCTA+AGG | + | chr7.3:18198187-18198206 | MS.gene44390:intron | 30.0% |
| !!! | TTTTTTGTTTGTAGACGAAG+CGG | - | chr7.3:18197109-18197128 | None:intergenic | 30.0% |
| AAATTAAGAGAGTTTGGGAG+CGG | - | chr7.3:18200189-18200208 | None:intergenic | 35.0% | |
| AAGAAAAGGAAAACGAGTAG+TGG | + | chr7.3:18197127-18197146 | MS.gene44390:intron | 35.0% | |
| AAGAGCTATATCAAGCTTCA+AGG | - | chr7.3:18198035-18198054 | None:intergenic | 35.0% | |
| AATCAAAGACCTCTGATTCT+TGG | - | chr7.3:18200758-18200777 | None:intergenic | 35.0% | |
| ACATGAAGTGATCTGAGTTA+AGG | + | chr7.3:18198573-18198592 | MS.gene44390:intron | 35.0% | |
| AGAATCAGAGGTCTTTGATT+TGG | + | chr7.3:18200758-18200777 | MS.gene44390:CDS | 35.0% | |
| AGAGAATTAATGACCAGGAT+TGG | + | chr7.3:18197626-18197645 | MS.gene44390:intron | 35.0% | |
| AGATCGTTGTTTGGTATATC+GGG | + | chr7.3:18198115-18198134 | MS.gene44390:intron | 35.0% | |
| AGCAATGAAAAAAGCTGAAC+TGG | + | chr7.3:18200707-18200726 | MS.gene44390:CDS | 35.0% | |
| AGGGAAACTACTTCATTGAA+GGG | + | chr7.3:18200811-18200830 | MS.gene44390:CDS | 35.0% | |
| AGGTAATCTAACAGCAAATG+AGG | + | chr7.3:18197355-18197374 | MS.gene44390:intron | 35.0% | |
| AGTGGAAAATGTACAGGTTA+AGG | + | chr7.3:18198884-18198903 | MS.gene44390:intron | 35.0% | |
| ATTCTATTCATTCTGTTGGC+AGG | + | chr7.3:18199348-18199367 | MS.gene44390:intron | 35.0% | |
| ATTGATCAAGTTCGCATTTC+GGG | - | chr7.3:18200090-18200109 | None:intergenic | 35.0% | |
| CACCACAAATTGCAAAACTT+AGG | - | chr7.3:18197434-18197453 | None:intergenic | 35.0% | |
| CCCTAAAACATTCAAATGTG+AGG | - | chr7.3:18198357-18198376 | None:intergenic | 35.0% | |
| CTTGATATAGCTCTTGGAAT+TGG | + | chr7.3:18198040-18198059 | MS.gene44390:CDS | 35.0% | |
| GAATAATGACTCAAGCACTA+CGG | + | chr7.3:18200143-18200162 | MS.gene44390:CDS | 35.0% | |
| GCAATGAAAAAAGCTGAACT+GGG | + | chr7.3:18200708-18200727 | MS.gene44390:CDS | 35.0% | |
| GTGGAAAATGTACAGGTTAA+GGG | + | chr7.3:18198885-18198904 | MS.gene44390:intron | 35.0% | |
| TACATTCGGAGTATAAAGTG+TGG | - | chr7.3:18198242-18198261 | None:intergenic | 35.0% | |
| TATCCCTTTAGATCGTTGTT+TGG | + | chr7.3:18198106-18198125 | MS.gene44390:intron | 35.0% | |
| TCATGGTAAGCTTCAAAATG+AGG | - | chr7.3:18196790-18196809 | None:intergenic | 35.0% | |
| TCCTTGTAGTCTGGAAAATT+AGG | + | chr7.3:18197802-18197821 | MS.gene44390:intron | 35.0% | |
| TGGATCTCATGACAATGTAA+AGG | - | chr7.3:18199606-18199625 | None:intergenic | 35.0% | |
| TGTGTGTGCATGTGTAAAAT+GGG | - | chr7.3:18198777-18198796 | None:intergenic | 35.0% | |
| TTGAAGCTTGATATAGCTCT+TGG | + | chr7.3:18198034-18198053 | MS.gene44390:CDS | 35.0% | |
| ! | AACCACTTGTAACACTGATT+AGG | + | chr7.3:18197395-18197414 | MS.gene44390:intron | 35.0% |
| ! | ACCACTTGTAACACTGATTA+GGG | + | chr7.3:18197396-18197415 | MS.gene44390:intron | 35.0% |
| ! | ACCTAATTTTCCAGACTACA+AGG | - | chr7.3:18197806-18197825 | None:intergenic | 35.0% |
| ! | ACTAGTCTAGTTATCACCTT+TGG | - | chr7.3:18198073-18198092 | None:intergenic | 35.0% |
| ! | AGAAGCTGCTGAACAATTTT+TGG | + | chr7.3:18200851-18200870 | MS.gene44390:CDS | 35.0% |
| ! | ATATTTTCCGGAAATGGGAA+AGG | - | chr7.3:18196649-18196668 | None:intergenic | 35.0% |
| ! | CACCTAAGTTTTGCAATTTG+TGG | + | chr7.3:18197429-18197448 | MS.gene44390:intron | 35.0% |
| ! | GCCTCACATTTGAATGTTTT+AGG | + | chr7.3:18198353-18198372 | MS.gene44390:intron | 35.0% |
| ! | TATTTTCCGGAAATGGGAAA+GGG | - | chr7.3:18196648-18196667 | None:intergenic | 35.0% |
| ! | TGTGTGATGTATGTGAGTTT+TGG | + | chr7.3:18196923-18196942 | MS.gene44390:intron | 35.0% |
| !! | TGCTGAAAATTTGTTGAGCA+TGG | + | chr7.3:18199470-18199489 | MS.gene44390:CDS | 35.0% |
| !! | TTGATTTGGCTTGTGAACAT+GGG | + | chr7.3:18200772-18200791 | MS.gene44390:CDS | 35.0% |
| !! | TTTAGTCCAAAAGCATTTGG+GGG | + | chr7.3:18200335-18200354 | MS.gene44390:CDS | 35.0% |
| !! | TTTGATTTGGCTTGTGAACA+TGG | + | chr7.3:18200771-18200790 | MS.gene44390:CDS | 35.0% |
| !!! | CACTTTTTTTCCTAAGGTGT+TGG | + | chr7.3:18198193-18198212 | MS.gene44390:intron | 35.0% |
| AAAGTGCAACATTGTCCACT+AGG | - | chr7.3:18198179-18198198 | None:intergenic | 40.0% | |
| AAGTGCAACATTGTCCACTA+GGG | - | chr7.3:18198178-18198197 | None:intergenic | 40.0% | |
| AATGAATAACGAGAGGAACC+TGG | - | chr7.3:18196741-18196760 | None:intergenic | 40.0% | |
| AATTAAGAGAGTTTGGGAGC+GGG | - | chr7.3:18200188-18200207 | None:intergenic | 40.0% | |
| ACTTGTAGTTATCAGGACTC+AGG | - | chr7.3:18197203-18197222 | None:intergenic | 40.0% | |
| AGAAGAAGCTTAATGCAGTC+TGG | - | chr7.3:18199202-18199221 | None:intergenic | 40.0% | |
| AGGCATATTAAGGAAACCTG+TGG | - | chr7.3:18198337-18198356 | None:intergenic | 40.0% | |
| AGTTGGATGAGTGTCTGTTA+CGG | - | chr7.3:18199691-18199710 | None:intergenic | 40.0% | |
| ATCAAGTTAAGCACTTCACC+TGG | + | chr7.3:18197028-18197047 | MS.gene44390:intron | 40.0% | |
| ATGCGAAATAGACACAACGT+GGG | - | chr7.3:18197708-18197727 | None:intergenic | 40.0% | |
| ATTTCGCATGAACTCTCAGT+GGG | + | chr7.3:18197719-18197738 | MS.gene44390:intron | 40.0% | |
| CGTTTGCGACTTTCAAGAAT+GGG | + | chr7.3:18200419-18200438 | MS.gene44390:CDS | 40.0% | |
| CTTTCACTTGTGGAGTCAAT+GGG | + | chr7.3:18199408-18199427 | MS.gene44390:CDS | 40.0% | |
| GAGGGAAACTACTTCATTGA+AGG | + | chr7.3:18200810-18200829 | MS.gene44390:CDS | 40.0% | |
| GATATAGCTCTTGGAATTGG+AGG | + | chr7.3:18198043-18198062 | MS.gene44390:CDS | 40.0% | |
| GCAGCTTCTCTACTAGTAAA+AGG | - | chr7.3:18200840-18200859 | None:intergenic | 40.0% | |
| GGGAAACTACTTCATTGAAG+GGG | + | chr7.3:18200812-18200831 | MS.gene44390:CDS | 40.0% | |
| GGGCTCATTATGAAAGATGA+GGG | + | chr7.3:18200792-18200811 | MS.gene44390:CDS | 40.0% | |
| GTCGGCATCATTTCAATTCA+CGG | + | chr7.3:18198992-18199011 | MS.gene44390:intron | 40.0% | |
| GTGGGTACATAAGGAGATAT+GGG | - | chr7.3:18197690-18197709 | None:intergenic | 40.0% | |
| GTGTGTGTGCATGTGTAAAA+TGG | - | chr7.3:18198778-18198797 | None:intergenic | 40.0% | |
| TAAAGAAGCTCAAAAGCTGG+AGG | + | chr7.3:18198441-18198460 | MS.gene44390:intron | 40.0% | |
| TACCACATGCTTACAGTATG+TGG | + | chr7.3:18198143-18198162 | MS.gene44390:intron | 40.0% | |
| TATTTCGCATGAACTCTCAG+TGG | + | chr7.3:18197718-18197737 | MS.gene44390:intron | 40.0% | |
| TCAAGTTAAGCACTTCACCT+GGG | + | chr7.3:18197029-18197048 | MS.gene44390:intron | 40.0% | |
| TCGTTTGCGACTTTCAAGAA+TGG | + | chr7.3:18200418-18200437 | MS.gene44390:CDS | 40.0% | |
| TGAGGCATAGAGAAAGAACT+GGG | + | chr7.3:18199026-18199045 | MS.gene44390:intron | 40.0% | |
| TGCATTAGACCTTTCACTTG+TGG | + | chr7.3:18199398-18199417 | MS.gene44390:CDS | 40.0% | |
| TGGAATTGGAGGATTACCAA+AGG | + | chr7.3:18198054-18198073 | MS.gene44390:CDS | 40.0% | |
| TGGGCTCATTATGAAAGATG+AGG | + | chr7.3:18200791-18200810 | MS.gene44390:CDS | 40.0% | |
| ! | ACACTGATTAGGGGAATTGA+TGG | + | chr7.3:18197406-18197425 | MS.gene44390:intron | 40.0% |
| ! | CCACTTGTAACACTGATTAG+GGG | + | chr7.3:18197397-18197416 | MS.gene44390:intron | 40.0% |
| ! | TCATTGGCTGAGCAATGTTT+GGG | - | chr7.3:18197176-18197195 | None:intergenic | 40.0% |
| ! | TTCATTGGCTGAGCAATGTT+TGG | - | chr7.3:18197177-18197196 | None:intergenic | 40.0% |
| ! | TTTTATCCTCTCCTGACATC+TGG | + | chr7.3:18200623-18200642 | MS.gene44390:intron | 40.0% |
| !!! | TCAGCTTTTTTCATTGCTGC+TGG | - | chr7.3:18200705-18200724 | None:intergenic | 40.0% |
| AACCTGAAACACCAGATGTC+AGG | - | chr7.3:18200637-18200656 | None:intergenic | 45.0% | |
| AAGAGAGTAAAGGCCTTGCA+AGG | - | chr7.3:18196696-18196715 | None:intergenic | 45.0% | |
| AAGATAGCACAGAGTAGCAG+TGG | - | chr7.3:18198716-18198735 | None:intergenic | 45.0% | |
| AAGCTTCCCTTTCCCATTTC+CGG | + | chr7.3:18196639-18196658 | MS.gene44390:CDS | 45.0% | |
| AGACACAACGTGGGTACATA+AGG | - | chr7.3:18197699-18197718 | None:intergenic | 45.0% | |
| AGGAGAGAGGAAGAGAGTAA+AGG | - | chr7.3:18196706-18196725 | None:intergenic | 45.0% | |
| ATTTATGGACGAGAAGCAGC+TGG | + | chr7.3:18198390-18198409 | MS.gene44390:CDS | 45.0% | |
| CACAAACACACCAACACCTT+AGG | - | chr7.3:18198206-18198225 | None:intergenic | 45.0% | |
| CATGCGAAATAGACACAACG+TGG | - | chr7.3:18197709-18197728 | None:intergenic | 45.0% | |
| CCCCTAATCAGTGTTACAAG+TGG | - | chr7.3:18197400-18197419 | None:intergenic | 45.0% | |
| CCTTTCACTTGTGGAGTCAA+TGG | + | chr7.3:18199407-18199426 | MS.gene44390:CDS | 45.0% | |
| CGTGGGTACATAAGGAGATA+TGG | - | chr7.3:18197691-18197710 | None:intergenic | 45.0% | |
| CTATGCCAATGTCGTTCTAC+AGG | + | chr7.3:18198007-18198026 | MS.gene44390:intron | 45.0% | |
| CTGGGTATCAAGTTTGGAAG+AGG | + | chr7.3:18200726-18200745 | MS.gene44390:CDS | 45.0% | |
| GACCACATACTGTAAGCATG+TGG | - | chr7.3:18198148-18198167 | None:intergenic | 45.0% | |
| GCTGAACTGGGTATCAAGTT+TGG | + | chr7.3:18200720-18200739 | MS.gene44390:CDS | 45.0% | |
| GTGAGGCATAGAGAAAGAAC+TGG | + | chr7.3:18199025-18199044 | MS.gene44390:intron | 45.0% | |
| GTTGACAGTGTGAGTTACTG+TGG | + | chr7.3:18199534-18199553 | MS.gene44390:intron | 45.0% | |
| TCAGGACTCAGGAGTTTCAT+TGG | - | chr7.3:18197192-18197211 | None:intergenic | 45.0% | |
| TGTCTCTCTTCCTTGTAGTC+TGG | + | chr7.3:18197793-18197812 | MS.gene44390:intron | 45.0% | |
| TGTCTGTTACGGCTACAACA+GGG | - | chr7.3:18199680-18199699 | None:intergenic | 45.0% | |
| TTCACGGTTACTCAGAAGTG+AGG | + | chr7.3:18199008-18199027 | MS.gene44390:intron | 45.0% | |
| ! | AGGCTTTTGCCAAGAATCAG+AGG | + | chr7.3:18200746-18200765 | MS.gene44390:CDS | 45.0% |
| ! | ATCTGAAACACCACCGTTGA+AGG | + | chr7.3:18197272-18197291 | MS.gene44390:intron | 45.0% |
| !! | ACATCTGGTGTTTCAGGTTG+AGG | + | chr7.3:18200638-18200657 | MS.gene44390:intron | 45.0% |
| !! | CATCTGGTGTTTCAGGTTGA+GGG | + | chr7.3:18200639-18200658 | MS.gene44390:intron | 45.0% |
| !! | CCATTGACTCCACAAGTGAA+AGG | - | chr7.3:18199410-18199429 | None:intergenic | 45.0% |
| !! | GAACTGTCGGAGCTTGTTAT+GGG | + | chr7.3:18198623-18198642 | MS.gene44390:intron | 45.0% |
| !! | GTTTCAGGTTGAGGGTATCA+CGG | + | chr7.3:18200647-18200666 | MS.gene44390:intron | 45.0% |
| !! | TGAACTGTCGGAGCTTGTTA+TGG | + | chr7.3:18198622-18198641 | MS.gene44390:intron | 45.0% |
| !!! | AAATATTTTAAAAAAAATCA+TGG | - | chr7.3:18196807-18196826 | None:intergenic | 5.0% |
| ACCTGCTCGCTTTCTACTAC+AGG | + | chr7.3:18197656-18197675 | MS.gene44390:intron | 50.0% | |
| ACCTGTAGTAGAAAGCGAGC+AGG | - | chr7.3:18197660-18197679 | None:intergenic | 50.0% | |
| ACTTCACCTGGGTTCAAACC+CGG | + | chr7.3:18197040-18197059 | MS.gene44390:intron | 50.0% | |
| AGGAGCCTGTAGAACGACAT+TGG | - | chr7.3:18198015-18198034 | None:intergenic | 50.0% | |
| ATGGAAGAGGTCACTTGTGG+TGG | + | chr7.3:18200368-18200387 | MS.gene44390:CDS | 50.0% | |
| CATTGTCCACTAGGGACGAT+CGG | - | chr7.3:18198170-18198189 | None:intergenic | 50.0% | |
| CCACAAGTGACCTCTTCCAT+AGG | - | chr7.3:18200368-18200387 | None:intergenic | 50.0% | |
| CCTATGGAAGAGGTCACTTG+TGG | + | chr7.3:18200365-18200384 | MS.gene44390:CDS | 50.0% | |
| CTCCTGACATCTGGTGTTTC+AGG | + | chr7.3:18200632-18200651 | MS.gene44390:intron | 50.0% | |
| GAAACACCAGATGTCAGGAG+AGG | - | chr7.3:18200632-18200651 | None:intergenic | 50.0% | |
| GCAGGTGTTTACACCAATCC+TGG | - | chr7.3:18197642-18197661 | None:intergenic | 50.0% | |
| GTAAAGGCCTTGCAAGGAGA+TGG | - | chr7.3:18196690-18196709 | None:intergenic | 50.0% | |
| GTGTCTGTTACGGCTACAAC+AGG | - | chr7.3:18199681-18199700 | None:intergenic | 50.0% | |
| TACGTGGTGTTCGAGTGTTC+AGG | + | chr7.3:18197074-18197093 | MS.gene44390:intron | 50.0% | |
| TGGAGCTGTAGACGTGATTG+TGG | + | chr7.3:18199512-18199531 | MS.gene44390:CDS | 50.0% | |
| ! | AAAGGGAAGCTTTAGTGCGC+TGG | - | chr7.3:18196631-18196650 | None:intergenic | 50.0% |
| ! | GCTTGCTAGCGAGTTTAGCA+AGG | + | chr7.3:18197947-18197966 | MS.gene44390:intron | 50.0% |
| !! | CTGCTGCTTTGACATCGTCA+TGG | - | chr7.3:18197891-18197910 | None:intergenic | 50.0% |
| CTCGTCTCCATCTCCTTGCA+AGG | + | chr7.3:18196680-18196699 | MS.gene44390:CDS | 55.0% | |
| CTTCACCTGGGTTCAAACCC+GGG | + | chr7.3:18197041-18197060 | MS.gene44390:intron | 55.0% | |
| GTGGTGTTCGAGTGTTCAGG+TGG | + | chr7.3:18197077-18197096 | MS.gene44390:intron | 55.0% | |
| GTTACGGCTACAACAGGGCT+GGG | - | chr7.3:18199675-18199694 | None:intergenic | 55.0% | |
| TATCACGGTCTGTGCGCAAG+TGG | + | chr7.3:18200662-18200681 | MS.gene44390:CDS | 55.0% | |
| TCGAACACCACGTATCTGCG+AGG | - | chr7.3:18197068-18197087 | None:intergenic | 55.0% | |
| TGTTACGGCTACAACAGGGC+TGG | - | chr7.3:18199676-18199695 | None:intergenic | 55.0% | |
| ! | AATGGGCAGCACACTGACTG+TGG | - | chr7.3:18198760-18198779 | None:intergenic | 55.0% |
| ! | CTCAGTGGGCTTTCTTCCGA+AGG | + | chr7.3:18197733-18197752 | MS.gene44390:intron | 55.0% |
| !! | CCAAAAGCATTTGGGGGACG+CGG | + | chr7.3:18200341-18200360 | MS.gene44390:CDS | 55.0% |
| ACACCACCGTTGAAGGACGC+AGG | + | chr7.3:18197279-18197298 | MS.gene44390:intron | 60.0% | |
| ACCACGTATCTGCGAGGTCC+CGG | - | chr7.3:18197062-18197081 | None:intergenic | 60.0% | |
| ATTTGGGGGACGCGGACCTA+TGG | + | chr7.3:18200349-18200368 | MS.gene44390:CDS | 60.0% | |
| CACCACCGTTGAAGGACGCA+GGG | + | chr7.3:18197280-18197299 | MS.gene44390:intron | 60.0% | |
| GTGAGCCCTGCGTCCTTCAA+CGG | - | chr7.3:18197288-18197307 | None:intergenic | 60.0% | |
| TCGGGACAAGAGCAGCAACC+TGG | - | chr7.3:18200072-18200091 | None:intergenic | 60.0% | |
| TGTGGTCCGATCGTCCCTAG+TGG | + | chr7.3:18198161-18198180 | MS.gene44390:intron | 60.0% | |
| ! | CCGCGTCCCCCAAATGCTTT+TGG | - | chr7.3:18200344-18200363 | None:intergenic | 60.0% |
| ACGAGAGGAACCTGGCGCGA+AGG | - | chr7.3:18196733-18196752 | None:intergenic | 65.0% | |
| AGCCCTGCGTCCTTCAACGG+TGG | - | chr7.3:18197285-18197304 | None:intergenic | 65.0% | |
| CCACGTATCTGCGAGGTCCC+GGG | - | chr7.3:18197061-18197080 | None:intergenic | 65.0% | |
| CGAGAGGAACCTGGCGCGAA+GGG | - | chr7.3:18196732-18196751 | None:intergenic | 65.0% | |
| GAGGTCCCGGGTTTGAACCC+AGG | - | chr7.3:18197049-18197068 | None:intergenic | 65.0% | |
| GGGACGCGGACCTATGGAAG+AGG | + | chr7.3:18200355-18200374 | MS.gene44390:CDS | 65.0% | |
| CCCGGGACCTCGCAGATACG+TGG | + | chr7.3:18197058-18197077 | MS.gene44390:intron | 70.0% | |
| GAACCTGGCGCGAAGGGTGG+AGG | - | chr7.3:18196726-18196745 | None:intergenic | 70.0% | |
| GAGGAACCTGGCGCGAAGGG+TGG | - | chr7.3:18196729-18196748 | None:intergenic | 70.0% | |
| GCGCGAAGGGTGGAGGAGAG+AGG | - | chr7.3:18196719-18196738 | None:intergenic | 70.0% | |
| TCTCCTCCACCCTTCGCGCC+AGG | + | chr7.3:18196720-18196739 | MS.gene44390:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 18196588 | 18200932 | 18196588 | ID=MS.gene44390 |
| chr7.3 | mRNA | 18196588 | 18200932 | 18196588 | ID=MS.gene44390.t1;Parent=MS.gene44390 |
| chr7.3 | exon | 18196588 | 18196741 | 18196588 | ID=MS.gene44390.t1.exon1;Parent=MS.gene44390.t1 |
| chr7.3 | CDS | 18196588 | 18196741 | 18196588 | ID=cds.MS.gene44390.t1;Parent=MS.gene44390.t1 |
| chr7.3 | exon | 18198029 | 18198075 | 18198029 | ID=MS.gene44390.t1.exon2;Parent=MS.gene44390.t1 |
| chr7.3 | CDS | 18198029 | 18198075 | 18198029 | ID=cds.MS.gene44390.t1;Parent=MS.gene44390.t1 |
| chr7.3 | exon | 18198375 | 18198411 | 18198375 | ID=MS.gene44390.t1.exon3;Parent=MS.gene44390.t1 |
| chr7.3 | CDS | 18198375 | 18198411 | 18198375 | ID=cds.MS.gene44390.t1;Parent=MS.gene44390.t1 |
| chr7.3 | exon | 18199370 | 18199542 | 18199370 | ID=MS.gene44390.t1.exon4;Parent=MS.gene44390.t1 |
| chr7.3 | CDS | 18199370 | 18199542 | 18199370 | ID=cds.MS.gene44390.t1;Parent=MS.gene44390.t1 |
| chr7.3 | exon | 18200073 | 18200219 | 18200073 | ID=MS.gene44390.t1.exon5;Parent=MS.gene44390.t1 |
| chr7.3 | CDS | 18200073 | 18200219 | 18200073 | ID=cds.MS.gene44390.t1;Parent=MS.gene44390.t1 |
| chr7.3 | exon | 18200329 | 18200463 | 18200329 | ID=MS.gene44390.t1.exon6;Parent=MS.gene44390.t1 |
| chr7.3 | CDS | 18200329 | 18200463 | 18200329 | ID=cds.MS.gene44390.t1;Parent=MS.gene44390.t1 |
| chr7.3 | exon | 18200654 | 18200932 | 18200654 | ID=MS.gene44390.t1.exon7;Parent=MS.gene44390.t1 |
| chr7.3 | CDS | 18200654 | 18200932 | 18200654 | ID=cds.MS.gene44390.t1;Parent=MS.gene44390.t1 |
| Gene Sequence |
| Protein sequence |
