Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47707.t1 | XP_003617278.1 | 98.1 | 462 | 9 | 0 | 14 | 475 | 3 | 464 | 6.80E-237 | 829.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47707.t1 | F4HY56 | 32.0 | 228 | 102 | 6 | 31 | 258 | 41 | 215 | 1.0e-18 | 96.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47707.t1 | G7K365 | 98.1 | 462 | 9 | 0 | 14 | 475 | 3 | 464 | 4.9e-237 | 829.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene47707.t1 | TF | HB-other |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene47707 | 0.804743 | 1.87E-49 | -1.69E-46 |
| MS.gene049499 | MS.gene47707 | 0.800391 | 1.47E-48 | -1.69E-46 |
| MS.gene049983 | MS.gene47707 | 0.817768 | 2.78E-52 | -1.69E-46 |
| MS.gene050646 | MS.gene47707 | 0.802371 | 5.79E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene47707 | 0.815257 | 1.01E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene47707 | 0.81088 | 9.25E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene47707 | 0.815757 | 7.85E-52 | -1.69E-46 |
| MS.gene054892 | MS.gene47707 | 0.842234 | 2.93E-58 | -1.69E-46 |
| MS.gene054893 | MS.gene47707 | 0.835759 | 1.39E-56 | -1.69E-46 |
| MS.gene055327 | MS.gene47707 | 0.800177 | 1.63E-48 | -1.69E-46 |
| MS.gene055864 | MS.gene47707 | 0.846715 | 1.82E-59 | -1.69E-46 |
| MS.gene056174 | MS.gene47707 | 0.812589 | 3.93E-51 | -1.69E-46 |
| MS.gene056638 | MS.gene47707 | 0.806073 | 9.82E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene47707 | 0.807287 | 5.44E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene47707 | 0.829132 | 6.11E-55 | -1.69E-46 |
| MS.gene05690 | MS.gene47707 | 0.801596 | 8.36E-49 | -1.69E-46 |
| MS.gene056973 | MS.gene47707 | 0.80938 | 1.95E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene47707 | 0.816993 | 4.15E-52 | -1.69E-46 |
| MS.gene058081 | MS.gene47707 | 0.803568 | 3.28E-49 | -1.69E-46 |
| MS.gene058289 | MS.gene47707 | 0.827666 | 1.38E-54 | -1.69E-46 |
| MS.gene058427 | MS.gene47707 | 0.805158 | 1.53E-49 | -1.69E-46 |
| MS.gene058429 | MS.gene47707 | 0.811102 | 8.28E-51 | -1.69E-46 |
| MS.gene05897 | MS.gene47707 | 0.837264 | 5.76E-57 | -1.69E-46 |
| MS.gene059170 | MS.gene47707 | 0.80558 | 1.25E-49 | -1.69E-46 |
| MS.gene059686 | MS.gene47707 | 0.800054 | 1.73E-48 | -1.69E-46 |
| MS.gene059774 | MS.gene47707 | 0.809939 | 1.48E-50 | -1.69E-46 |
| MS.gene060259 | MS.gene47707 | 0.808636 | 2.81E-50 | -1.69E-46 |
| MS.gene060520 | MS.gene47707 | 0.813341 | 2.69E-51 | -1.69E-46 |
| MS.gene060697 | MS.gene47707 | 0.809506 | 1.83E-50 | -1.69E-46 |
| MS.gene060785 | MS.gene47707 | 0.80103 | 1.09E-48 | -1.69E-46 |
| MS.gene060933 | MS.gene47707 | 0.845691 | 3.47E-59 | -1.69E-46 |
| MS.gene060935 | MS.gene47707 | 0.811879 | 5.61E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene47707 | 0.828485 | 8.76E-55 | -1.69E-46 |
| MS.gene061188 | MS.gene47707 | 0.817818 | 2.71E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47707.t1 | MTR_5g089870 | 97.619 | 462 | 11 | 0 | 14 | 475 | 3 | 464 | 0.0 | 938 |
| MS.gene47707.t1 | MTR_3g045830 | 55.224 | 469 | 158 | 7 | 14 | 475 | 3 | 426 | 4.26e-156 | 453 |
| MS.gene47707.t1 | MTR_4g088375 | 53.571 | 56 | 26 | 0 | 31 | 86 | 33 | 88 | 3.86e-13 | 72.8 |
| MS.gene47707.t1 | MTR_4g088375 | 53.571 | 56 | 26 | 0 | 31 | 86 | 33 | 88 | 4.05e-13 | 72.4 |
| MS.gene47707.t1 | MTR_4g088375 | 53.571 | 56 | 26 | 0 | 31 | 86 | 33 | 88 | 4.05e-13 | 72.4 |
| MS.gene47707.t1 | MTR_2g014490 | 51.724 | 58 | 28 | 0 | 31 | 88 | 42 | 99 | 1.27e-12 | 70.9 |
| MS.gene47707.t1 | MTR_2g014490 | 51.724 | 58 | 28 | 0 | 31 | 88 | 42 | 99 | 1.38e-12 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47707.t1 | AT4G03250 | 54.167 | 264 | 99 | 3 | 14 | 274 | 4 | 248 | 5.53e-77 | 249 |
| MS.gene47707.t1 | AT1G28420 | 55.357 | 56 | 25 | 0 | 31 | 86 | 41 | 96 | 1.46e-14 | 77.0 |
Find 103 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACTCCTTTGCACATTCTT+TGG | 0.238382 | 5.3:-72462895 | None:intergenic |
| TTGACAGAAAAGCAAGTTTC+TGG | 0.248103 | 5.3:+72459901 | MS.gene47707:CDS |
| TCACTCCTTTGCGCTTTCTT+TGG | 0.251232 | 5.3:-72462958 | None:intergenic |
| GATTGCACCTTTCGGATTTA+AGG | 0.253961 | 5.3:-72460298 | None:intergenic |
| CCATTGCTCTCAACCTCTTT+AGG | 0.268733 | 5.3:-72460087 | None:intergenic |
| AAGAAAGAGGGCTATCTTCT+AGG | 0.323284 | 5.3:+72463040 | MS.gene47707:CDS |
| CAGGATCGTGGCAGTGGACT+TGG | 0.326571 | 5.3:+72460015 | MS.gene47707:CDS |
| GTTGCATGATGTTCATGTTC+AGG | 0.329068 | 5.3:+72462597 | MS.gene47707:CDS |
| CAAAACGCCTGCACAGCTTA+AGG | 0.338384 | 5.3:+72459726 | MS.gene47707:CDS |
| CTGAAAAGTTTGTCTATGTT+TGG | 0.340704 | 5.3:-72462650 | None:intergenic |
| ACTGCTGTTAAGAAGCAATT+AGG | 0.344355 | 5.3:+72460384 | MS.gene47707:CDS |
| ACATGGTGATTATAAGTATC+TGG | 0.364601 | 5.3:+72460062 | MS.gene47707:CDS |
| CCCATGTTGATTGCACCTTT+CGG | 0.370330 | 5.3:-72460306 | None:intergenic |
| CTCCTTCCATATGAGTATCT+TGG | 0.372564 | 5.3:-72462561 | None:intergenic |
| TAAACTTCTTGCTTCTCGTT+TGG | 0.376155 | 5.3:+72459632 | MS.gene47707:CDS |
| CCTTTGCACATTCTTTGGAT+TGG | 0.379454 | 5.3:-72462890 | None:intergenic |
| GAATTTGATCCACTTCCTCC+TGG | 0.387621 | 5.3:+72460444 | MS.gene47707:CDS |
| CATGAACTGCGTCTTCAGTT+TGG | 0.394238 | 5.3:-72460479 | None:intergenic |
| GCAATTAGGAAGGAATTATC+AGG | 0.404766 | 5.3:+72460398 | MS.gene47707:CDS |
| TCCTTCCATATGAGTATCTT+GGG | 0.407012 | 5.3:-72462560 | None:intergenic |
| GCTAATTTCAATTCCTCTGT+TGG | 0.408111 | 5.3:-72459859 | None:intergenic |
| ACAACATTGCTAAGAATCAT+AGG | 0.408486 | 5.3:+72462746 | MS.gene47707:CDS |
| CAAACTGAAGACGCAGTTCA+TGG | 0.411080 | 5.3:+72460480 | MS.gene47707:CDS |
| CTAGAAGGCTCCATCTCATA+TGG | 0.414116 | 5.3:-72460255 | None:intergenic |
| AAAACGCCTGCACAGCTTAA+GGG | 0.415864 | 5.3:+72459727 | MS.gene47707:CDS |
| ATTGCACCTTTCGGATTTAA+GGG | 0.420903 | 5.3:-72460297 | None:intergenic |
| AGAGTCTTCGTACAAATCTA+AGG | 0.421428 | 5.3:-72462707 | None:intergenic |
| CAAGTCCACTGCCACGATCC+TGG | 0.429748 | 5.3:-72460014 | None:intergenic |
| GAAGAGCAGGATCAGCAATA+TGG | 0.436376 | 5.3:-72462047 | None:intergenic |
| AAAGAAGAAGCAAATGCTAA+TGG | 0.457102 | 5.3:+72459964 | MS.gene47707:CDS |
| TCCAATCCCTTAAGCTGTGC+AGG | 0.458833 | 5.3:-72459733 | None:intergenic |
| CAGGAAGATGGTCCACTACT+TGG | 0.459717 | 5.3:+72460417 | MS.gene47707:CDS |
| GCTCCATCTCATATGGATCT+TGG | 0.461565 | 5.3:-72460248 | None:intergenic |
| CATATGGAAGGAGTTGACTT+TGG | 0.462273 | 5.3:+72462571 | MS.gene47707:CDS |
| TTTGTCTATGTTTGGTACCA+TGG | 0.463442 | 5.3:-72462642 | None:intergenic |
| GGATTCCAAGCGTGGTGTTG+AGG | 0.467670 | 5.3:+72462771 | MS.gene47707:CDS |
| TTTCTTCATAGCGATCACTA+TGG | 0.468844 | 5.3:-72462819 | None:intergenic |
| GATTCCAAGCGTGGTGTTGA+GGG | 0.471960 | 5.3:+72462772 | MS.gene47707:CDS |
| AGAGCTTTACTATATCTAGA+AGG | 0.474291 | 5.3:-72460270 | None:intergenic |
| GGGAAGTCTGAATGTTTGAC+TGG | 0.478673 | 5.3:-72462847 | None:intergenic |
| TCAAATGCCCCAGGAGGAAG+TGG | 0.480809 | 5.3:-72460453 | None:intergenic |
| TCTGGAGAATTCAGAAGAGC+AGG | 0.481510 | 5.3:-72462060 | None:intergenic |
| CATACCCTCAACACCACGCT+TGG | 0.482706 | 5.3:-72462776 | None:intergenic |
| GTCATCCAGGATCGTGGCAG+TGG | 0.484263 | 5.3:+72460009 | MS.gene47707:CDS |
| GCCTGCACAGCTTAAGGGAT+TGG | 0.485122 | 5.3:+72459732 | MS.gene47707:CDS |
| GATTTGTACGAAGACTCTAC+TGG | 0.489485 | 5.3:+72462712 | MS.gene47707:CDS |
| CAGAAAAGCAAGTTTCTGGA+TGG | 0.513041 | 5.3:+72459905 | MS.gene47707:CDS |
| TGGTTCCCAAGATACTCATA+TGG | 0.513127 | 5.3:+72462555 | MS.gene47707:CDS |
| AACATGGGATATAAGCCATC+GGG | 0.524849 | 5.3:+72460321 | MS.gene47707:CDS |
| TCTAAGGAAGAGTTCCTGCC+AGG | 0.525417 | 5.3:-72462691 | None:intergenic |
| AATTTGATCCACTTCCTCCT+GGG | 0.526950 | 5.3:+72460445 | MS.gene47707:CDS |
| TCGTTCAAGCGGTGTCATCC+AGG | 0.527070 | 5.3:+72459996 | MS.gene47707:CDS |
| TTCTGAAAATGTCAGTGGAA+TGG | 0.528577 | 5.3:+72460167 | MS.gene47707:CDS |
| GTTTGGCATTCAAATGCCCC+AGG | 0.531719 | 5.3:-72460462 | None:intergenic |
| GAATTGTGGATTGAGTTTGA+AGG | 0.540955 | 5.3:-72462997 | None:intergenic |
| ATCGGGATATTTGAAAGTGA+AGG | 0.542663 | 5.3:+72460338 | MS.gene47707:CDS |
| GCAGGATCAGCAATATGGTA+TGG | 0.543728 | 5.3:-72462042 | None:intergenic |
| GCTATCTTCTAGGATGACTA+AGG | 0.550617 | 5.3:+72463050 | MS.gene47707:CDS |
| CAAGAACGTTTGTATCCTCA+AGG | 0.550906 | 5.3:+72460225 | MS.gene47707:CDS |
| AGGATCGTGGCAGTGGACTT+GGG | 0.551473 | 5.3:+72460016 | MS.gene47707:CDS |
| TAAGTATCTGGATCCTAAAG+AGG | 0.555927 | 5.3:+72460074 | MS.gene47707:CDS |
| GGAAGGAATTATCAGGAAGA+TGG | 0.556235 | 5.3:+72460405 | MS.gene47707:CDS |
| TTCACTTTCAAATATCCCGA+TGG | 0.557109 | 5.3:-72460336 | None:intergenic |
| CCACAGAACCTCGAGAATTG+TGG | 0.558056 | 5.3:-72463011 | None:intergenic |
| TCATATGGATCTTGGCCTTG+AGG | 0.561124 | 5.3:-72460240 | None:intergenic |
| CCACAATTCTCGAGGTTCTG+TGG | 0.566754 | 5.3:+72463011 | MS.gene47707:CDS |
| CAGATATGACGTACGGACGC+AGG | 0.578687 | 5.3:+72460136 | MS.gene47707:CDS |
| AGGCCAAGATCCATATGAGA+TGG | 0.579497 | 5.3:+72460245 | MS.gene47707:CDS |
| TCCGAAAGGTGCAATCAACA+TGG | 0.580879 | 5.3:+72460305 | MS.gene47707:CDS |
| GATTCATATTATACTAAACA+TGG | 0.583805 | 5.3:+72462535 | MS.gene47707:CDS |
| CTACTTACAGAGCTAAGACC+AGG | 0.590912 | 5.3:-72462105 | None:intergenic |
| TCCCAAGATACTCATATGGA+AGG | 0.591524 | 5.3:+72462559 | MS.gene47707:CDS |
| AACTCAATCCACAATTCTCG+AGG | 0.592657 | 5.3:+72463003 | MS.gene47707:CDS |
| CAAGATAAGAAAGCTTTCCA+TGG | 0.592693 | 5.3:+72462625 | MS.gene47707:CDS |
| CAACATGGGATATAAGCCAT+CGG | 0.596722 | 5.3:+72460320 | MS.gene47707:CDS |
| ATTTGATCCACTTCCTCCTG+GGG | 0.597335 | 5.3:+72460446 | MS.gene47707:CDS |
| AGTCTGAATGTTTGACTGGG+AGG | 0.604885 | 5.3:-72462843 | None:intergenic |
| TCGGGATATTTGAAAGTGAA+GGG | 0.606990 | 5.3:+72460339 | MS.gene47707:CDS |
| CCTAAAGAGGTTGAGAGCAA+TGG | 0.608573 | 5.3:+72460087 | MS.gene47707:CDS |
| CTGTGGATACTGAAGAAAGA+GGG | 0.615063 | 5.3:+72463028 | MS.gene47707:CDS |
| TCCACAGTGAAAAGTCGACC+TGG | 0.615507 | 5.3:+72462087 | MS.gene47707:CDS |
| GTTCCTGCCAGGAAAACGAC+TGG | 0.617478 | 5.3:-72462680 | None:intergenic |
| TCAAATTCTACACCAAGTAG+TGG | 0.621557 | 5.3:-72460429 | None:intergenic |
| CATAGGAAGGATTCCAAGCG+TGG | 0.623253 | 5.3:+72462763 | MS.gene47707:CDS |
| CATTGCTAAGAATCATAGGA+AGG | 0.626755 | 5.3:+72462750 | MS.gene47707:CDS |
| ATTGAAATTAGCAATTGCTG+AGG | 0.629418 | 5.3:+72459870 | MS.gene47707:CDS |
| TCTGTTGCAGATATGACGTA+CGG | 0.637863 | 5.3:+72460129 | MS.gene47707:CDS |
| CTTCCACCCTTAAATCCGAA+AGG | 0.637927 | 5.3:+72460291 | MS.gene47707:CDS |
| AGCGGTGTCATCCAGGATCG+TGG | 0.640192 | 5.3:+72460003 | MS.gene47707:CDS |
| TCGTGTGGAAGCAGTAAACA+TGG | 0.646504 | 5.3:+72460045 | MS.gene47707:CDS |
| CTGTTAAGAAGCAATTAGGA+AGG | 0.648535 | 5.3:+72460388 | MS.gene47707:CDS |
| CAGACAAATCACGATTGTAG+AGG | 0.656746 | 5.3:-72460110 | None:intergenic |
| GGACTTGGGCAAGATTCGTG+TGG | 0.658289 | 5.3:+72460030 | MS.gene47707:CDS |
| TCTGTGGATACTGAAGAAAG+AGG | 0.660423 | 5.3:+72463027 | MS.gene47707:CDS |
| CCGAAAGGTGCAATCAACAT+GGG | 0.662695 | 5.3:+72460306 | MS.gene47707:CDS |
| CCAATCCAAAGAATGTGCAA+AGG | 0.663942 | 5.3:+72462890 | MS.gene47707:CDS |
| GGAAGTCTGAATGTTTGACT+GGG | 0.668574 | 5.3:-72462846 | None:intergenic |
| GCACCTTTCGGATTTAAGGG+TGG | 0.674376 | 5.3:-72460294 | None:intergenic |
| GGACGACAAGATCGTTCAAG+CGG | 0.685566 | 5.3:+72459985 | MS.gene47707:CDS |
| TGGCATTCAAATGCCCCAGG+AGG | 0.687115 | 5.3:-72460459 | None:intergenic |
| TCAATCCAAAGAAAGCGCAA+AGG | 0.687671 | 5.3:+72462953 | MS.gene47707:CDS |
| AGAGCACAAATATCCAACAG+AGG | 0.705663 | 5.3:+72459846 | MS.gene47707:intron |
| AGAAGAAAATAAAGTCTCTG+CGG | 0.706177 | 5.3:+72459681 | MS.gene47707:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAAATAATTTAAATAAC+TGG | - | chr5.3:72460971-72460990 | None:intergenic | 10.0% |
| !! | AGAGCAAAAATAAATTATAT+TGG | - | chr5.3:72461862-72461881 | None:intergenic | 15.0% |
| !!! | TTAATTAGTTTCCTTAAAAT+TGG | + | chr5.3:72461381-72461400 | MS.gene47707:intron | 15.0% |
| !! | AATTAAATGACTTGAAACAA+TGG | - | chr5.3:72462353-72462372 | None:intergenic | 20.0% |
| !! | ATGATGCTATTCTTAAAATT+TGG | + | chr5.3:72461549-72461568 | MS.gene47707:intron | 20.0% |
| !! | ATTCATTTATGTTATACAAC+CGG | + | chr5.3:72461294-72461313 | MS.gene47707:intron | 20.0% |
| !! | GATTCATATTATACTAAACA+TGG | + | chr5.3:72462535-72462554 | MS.gene47707:CDS | 20.0% |
| !! | GTTTCATATAACTAATAGAA+CGG | - | chr5.3:72460549-72460568 | None:intergenic | 20.0% |
| !! | TATTGAAAGCGAAAATAAAT+CGG | - | chr5.3:72461933-72461952 | None:intergenic | 20.0% |
| !! | TTTCATATAACTAATAGAAC+GGG | - | chr5.3:72460548-72460567 | None:intergenic | 20.0% |
| !!! | AAATTTAGAATATAGGTTCT+AGG | + | chr5.3:72461453-72461472 | MS.gene47707:intron | 20.0% |
| !!! | ATGAAACTAAAATGTTGTTT+AGG | + | chr5.3:72460562-72460581 | MS.gene47707:intron | 20.0% |
| !!! | GAAATATTTCTAGAAAAACA+TGG | - | chr5.3:72461887-72461906 | None:intergenic | 20.0% |
| !!! | GAATAAACTATCCAATTTTA+AGG | - | chr5.3:72461395-72461414 | None:intergenic | 20.0% |
| !!! | GGATTAGAAATTTAGAATAT+AGG | + | chr5.3:72461446-72461465 | MS.gene47707:intron | 20.0% |
| ! | AAAATTAAATGCAGCTGAAA+TGG | + | chr5.3:72462233-72462252 | MS.gene47707:intron | 25.0% |
| ! | AACTTCTTACTTTGGTTAAA+GGG | + | chr5.3:72462290-72462309 | MS.gene47707:intron | 25.0% |
| ! | AATTACTATGAGCACTTATA+CGG | - | chr5.3:72462415-72462434 | None:intergenic | 25.0% |
| ! | ACATATAAATAGACAGATGT+AGG | + | chr5.3:72461169-72461188 | MS.gene47707:intron | 25.0% |
| ! | ATATATAGTGAGAAAATGAG+AGG | + | chr5.3:72461203-72461222 | MS.gene47707:intron | 25.0% |
| ! | ATCCTAATACCTTAAAAACA+CGG | - | chr5.3:72461430-72461449 | None:intergenic | 25.0% |
| ! | CAAATCAATGATGATTTACA+AGG | + | chr5.3:72462205-72462224 | MS.gene47707:intron | 25.0% |
| ! | CAACAACTATATTAGAATCT+GGG | + | chr5.3:72461671-72461690 | MS.gene47707:intron | 25.0% |
| ! | CATGGAAAAACTTAATTACT+AGG | - | chr5.3:72462163-72462182 | None:intergenic | 25.0% |
| ! | CTTATCAAGTTAATTGTCAT+TGG | - | chr5.3:72460861-72460880 | None:intergenic | 25.0% |
| ! | GGTTGTATAACATAAATGAA+TGG | - | chr5.3:72461295-72461314 | None:intergenic | 25.0% |
| ! | TAAAAAATTGAGCTACATCA+AGG | - | chr5.3:72461086-72461105 | None:intergenic | 25.0% |
| ! | TAACCAAAGTAAGAAGTTAA+AGG | - | chr5.3:72462288-72462307 | None:intergenic | 25.0% |
| ! | TAACTTCTTACTTTGGTTAA+AGG | + | chr5.3:72462289-72462308 | MS.gene47707:intron | 25.0% |
| ! | TCAACAACTATATTAGAATC+TGG | + | chr5.3:72461670-72461689 | MS.gene47707:intron | 25.0% |
| ! | TCTATCCTAAATATGATACT+GGG | - | chr5.3:72461527-72461546 | None:intergenic | 25.0% |
| ! | TGTTAGTATTAATACTACCA+AGG | + | chr5.3:72460835-72460854 | MS.gene47707:intron | 25.0% |
| ! | TTCAACAAAAATCATCACTT+AGG | - | chr5.3:72459804-72459823 | None:intergenic | 25.0% |
| ! | TTCTTACCTTTGTATTGTTA+TGG | + | chr5.3:72462005-72462024 | MS.gene47707:intron | 25.0% |
| !! | AATTAAGTTTTTCCATGGAA+TGG | + | chr5.3:72462166-72462185 | MS.gene47707:intron | 25.0% |
| !! | ATCATTTAGGATAAAGGAAT+AGG | + | chr5.3:72460610-72460629 | MS.gene47707:intron | 25.0% |
| !! | ATCTTTTATCCTTTAACCTT+CGG | - | chr5.3:72459939-72459958 | None:intergenic | 25.0% |
| !! | ATTAAGTTTTTCCATGGAAT+GGG | + | chr5.3:72462167-72462186 | MS.gene47707:intron | 25.0% |
| !! | CAATGACAATTAACTTGATA+AGG | + | chr5.3:72460859-72460878 | MS.gene47707:intron | 25.0% |
| !! | CTAGTAATTAAGTTTTTCCA+TGG | + | chr5.3:72462161-72462180 | MS.gene47707:intron | 25.0% |
| !! | TGTTTTCATAGTTATACTGT+GGG | - | chr5.3:72462870-72462889 | None:intergenic | 25.0% |
| !! | TTGCAAGAGAAACTTTTAAA+CGG | + | chr5.3:72462371-72462390 | MS.gene47707:intron | 25.0% |
| !! | TTTATCTAGTCCATATTTTG+AGG | + | chr5.3:72461348-72461367 | MS.gene47707:intron | 25.0% |
| !!! | TTATCTAGTCCATATTTTGA+GGG | + | chr5.3:72461349-72461368 | MS.gene47707:intron | 25.0% |
| !!! | TTTGATTTGTCAAAACTGTT+AGG | + | chr5.3:72461050-72461069 | MS.gene47707:intron | 25.0% |
| AAAAACACGGCATTATCTTT+CGG | - | chr5.3:72461417-72461436 | None:intergenic | 30.0% | |
| AAAATGAGAACGCATTAGAA+AGG | - | chr5.3:72462132-72462151 | None:intergenic | 30.0% | |
| AAAGAAGAAGCAAATGCTAA+TGG | + | chr5.3:72459964-72459983 | MS.gene47707:CDS | 30.0% | |
| AACAATGTAGCTGATCATTT+AGG | + | chr5.3:72460597-72460616 | MS.gene47707:intron | 30.0% | |
| ACAACATTGCTAAGAATCAT+AGG | + | chr5.3:72462746-72462765 | MS.gene47707:CDS | 30.0% | |
| ACATGGTGATTATAAGTATC+TGG | + | chr5.3:72460062-72460081 | MS.gene47707:CDS | 30.0% | |
| AGAAGAAAATAAAGTCTCTG+CGG | + | chr5.3:72459681-72459700 | MS.gene47707:CDS | 30.0% | |
| AGAGCTTTACTATATCTAGA+AGG | - | chr5.3:72460273-72460292 | None:intergenic | 30.0% | |
| AGCATAATAATCTTTGTGCA+AGG | + | chr5.3:72461816-72461835 | MS.gene47707:intron | 30.0% | |
| ATAAATAGACAGATGTAGGT+AGG | + | chr5.3:72461173-72461192 | MS.gene47707:intron | 30.0% | |
| ATTGAAATTAGCAATTGCTG+AGG | + | chr5.3:72459870-72459889 | MS.gene47707:CDS | 30.0% | |
| CATCACGTTGTAATAATGTT+AGG | + | chr5.3:72460640-72460659 | MS.gene47707:intron | 30.0% | |
| CTGAAAAGTTTGTCTATGTT+TGG | - | chr5.3:72462653-72462672 | None:intergenic | 30.0% | |
| GAAATATTTCATCGTAGCTA+AGG | + | chr5.3:72461897-72461916 | MS.gene47707:intron | 30.0% | |
| GAATGCTTAAAGATAGATCT+CGG | + | chr5.3:72460687-72460706 | MS.gene47707:intron | 30.0% | |
| GAATTAGTATTTGCTTGATC+TGG | + | chr5.3:72461125-72461144 | MS.gene47707:intron | 30.0% | |
| GGCTTATAAGTTATGACTTA+AGG | - | chr5.3:72460950-72460969 | None:intergenic | 30.0% | |
| GTCTATCCTAAATATGATAC+TGG | - | chr5.3:72461528-72461547 | None:intergenic | 30.0% | |
| TAGCATCCATAACAATACAA+AGG | - | chr5.3:72462014-72462033 | None:intergenic | 30.0% | |
| TGCAATTATGAGAAGAATAC+CGG | - | chr5.3:72461316-72461335 | None:intergenic | 30.0% | |
| ! | AGTCCTTTAACTTCTTACTT+TGG | + | chr5.3:72462282-72462301 | MS.gene47707:intron | 30.0% |
| ! | GGATTGGAGAAATTTTATAC+GGG | + | chr5.3:72459748-72459767 | MS.gene47707:CDS | 30.0% |
| ! | GGGATTGGAGAAATTTTATA+CGG | + | chr5.3:72459747-72459766 | MS.gene47707:CDS | 30.0% |
| ! | GTGTTTTCATAGTTATACTG+TGG | - | chr5.3:72462871-72462890 | None:intergenic | 30.0% |
| ! | TAGCTGATCATTTAGGATAA+AGG | + | chr5.3:72460604-72460623 | MS.gene47707:intron | 30.0% |
| ! | TGTTGTTTAGGTTTGAAACT+TGG | + | chr5.3:72460574-72460593 | MS.gene47707:intron | 30.0% |
| !! | AAGATAATGCCGTGTTTTTA+AGG | + | chr5.3:72461418-72461437 | MS.gene47707:intron | 30.0% |
| !! | CATTTTTCTGAAAATGTCAG+TGG | + | chr5.3:72460162-72460181 | MS.gene47707:CDS | 30.0% |
| ACTGCTGTTAAGAAGCAATT+AGG | + | chr5.3:72460384-72460403 | MS.gene47707:CDS | 35.0% | |
| AGAGTCTTCGTACAAATCTA+AGG | - | chr5.3:72462710-72462729 | None:intergenic | 35.0% | |
| AGTGTCCCAGTATCATATTT+AGG | + | chr5.3:72461519-72461538 | MS.gene47707:intron | 35.0% | |
| ATAACTAATAGAACGGGAAC+TGG | - | chr5.3:72460542-72460561 | None:intergenic | 35.0% | |
| ATCGGGATATTTGAAAGTGA+AGG | + | chr5.3:72460338-72460357 | MS.gene47707:CDS | 35.0% | |
| ATGTTCATGTGCTATGCATT+GGG | + | chr5.3:72460777-72460796 | MS.gene47707:intron | 35.0% | |
| ATTGCACCTTTCGGATTTAA+GGG | - | chr5.3:72460300-72460319 | None:intergenic | 35.0% | |
| CAAGATAAGAAAGCTTTCCA+TGG | + | chr5.3:72462625-72462644 | MS.gene47707:CDS | 35.0% | |
| CAGTTGCTACATTTATGAAC+AGG | - | chr5.3:72462451-72462470 | None:intergenic | 35.0% | |
| CATTGCTAAGAATCATAGGA+AGG | + | chr5.3:72462750-72462769 | MS.gene47707:CDS | 35.0% | |
| CGTTTGCTCAAGTCTTTATA+AGG | + | chr5.3:72461729-72461748 | MS.gene47707:intron | 35.0% | |
| CTGTTAAGAAGCAATTAGGA+AGG | + | chr5.3:72460388-72460407 | MS.gene47707:CDS | 35.0% | |
| GAAAGAAAAACGGGGAAATA+GGG | - | chr5.3:72460520-72460539 | None:intergenic | 35.0% | |
| GCAATTAGGAAGGAATTATC+AGG | + | chr5.3:72460398-72460417 | MS.gene47707:CDS | 35.0% | |
| GCTAATTTCAATTCCTCTGT+TGG | - | chr5.3:72459862-72459881 | None:intergenic | 35.0% | |
| TAAAAGAGAGTGAGAAAGCA+GGG | - | chr5.3:72462494-72462513 | None:intergenic | 35.0% | |
| TAAACTTCTTGCTTCTCGTT+TGG | + | chr5.3:72459632-72459651 | MS.gene47707:CDS | 35.0% | |
| TAAGTATCTGGATCCTAAAG+AGG | + | chr5.3:72460074-72460093 | MS.gene47707:CDS | 35.0% | |
| TCAAATTCTACACCAAGTAG+TGG | - | chr5.3:72460432-72460451 | None:intergenic | 35.0% | |
| TCCTTCCATATGAGTATCTT+GGG | - | chr5.3:72462563-72462582 | None:intergenic | 35.0% | |
| TCGGGATATTTGAAAGTGAA+GGG | + | chr5.3:72460339-72460358 | MS.gene47707:CDS | 35.0% | |
| TTCACTTTCAAATATCCCGA+TGG | - | chr5.3:72460339-72460358 | None:intergenic | 35.0% | |
| TTCTTGAAACAACTTAGTCC+TGG | - | chr5.3:72461030-72461049 | None:intergenic | 35.0% | |
| TTGACAGAAAAGCAAGTTTC+TGG | + | chr5.3:72459901-72459920 | MS.gene47707:CDS | 35.0% | |
| TTTCTTCATAGCGATCACTA+TGG | - | chr5.3:72462822-72462841 | None:intergenic | 35.0% | |
| TTTGTCTATGTTTGGTACCA+TGG | - | chr5.3:72462645-72462664 | None:intergenic | 35.0% | |
| ! | AACCCAAAAAGCTAGCTTAA+GGG | + | chr5.3:72461702-72461721 | MS.gene47707:intron | 35.0% |
| ! | AAGTTAATTGTCATTGGCCT+TGG | - | chr5.3:72460855-72460874 | None:intergenic | 35.0% |
| ! | GAATTGTGGATTGAGTTTGA+AGG | - | chr5.3:72463000-72463019 | None:intergenic | 35.0% |
| ! | GGAGAAATTTTATACGGGTA+GGG | + | chr5.3:72459753-72459772 | MS.gene47707:intron | 35.0% |
| ! | TGGAGAAATTTTATACGGGT+AGG | + | chr5.3:72459752-72459771 | MS.gene47707:intron | 35.0% |
| ! | TTCTGAAAATGTCAGTGGAA+TGG | + | chr5.3:72460167-72460186 | MS.gene47707:CDS | 35.0% |
| !! | TATTTGTGCTCTGGAAACAA+AGG | - | chr5.3:72459838-72459857 | None:intergenic | 35.0% |
| !! | TTAGAATATAGGTTCTAGGC+TGG | + | chr5.3:72461457-72461476 | MS.gene47707:intron | 35.0% |
| !!! | AGGTGTTGTTTTGCTTGTTT+AGG | + | chr5.3:72461836-72461855 | MS.gene47707:intron | 35.0% |
| !!! | GCAGAGACTTTATTTTCTTC+TGG | - | chr5.3:72459682-72459701 | None:intergenic | 35.0% |
| !!! | TGCCGTGTTTTTAAGGTATT+AGG | + | chr5.3:72461425-72461444 | MS.gene47707:intron | 35.0% |
| AAAAGAGAGTGAGAAAGCAG+GGG | - | chr5.3:72462493-72462512 | None:intergenic | 40.0% | |
| AACATGGGATATAAGCCATC+GGG | + | chr5.3:72460321-72460340 | MS.gene47707:CDS | 40.0% | |
| AACTCAATCCACAATTCTCG+AGG | + | chr5.3:72463003-72463022 | MS.gene47707:CDS | 40.0% | |
| AAGAAAGAGGGCTATCTTCT+AGG | + | chr5.3:72463040-72463059 | MS.gene47707:CDS | 40.0% | |
| AATTTGATCCACTTCCTCCT+GGG | + | chr5.3:72460445-72460464 | MS.gene47707:CDS | 40.0% | |
| ACAATATCGATCCCATTCCA+TGG | - | chr5.3:72462181-72462200 | None:intergenic | 40.0% | |
| ACACTCCTTTGCACATTCTT+TGG | - | chr5.3:72462898-72462917 | None:intergenic | 40.0% | |
| ACGGGAACTGGAAAGAAAAA+CGG | - | chr5.3:72460530-72460549 | None:intergenic | 40.0% | |
| ACTTAATCTTGACCATCCCA+CGG | + | chr5.3:72461226-72461245 | MS.gene47707:intron | 40.0% | |
| AGAGCACAAATATCCAACAG+AGG | + | chr5.3:72459846-72459865 | MS.gene47707:intron | 40.0% | |
| AGCCACAAACCCTCAAAATA+TGG | - | chr5.3:72461361-72461380 | None:intergenic | 40.0% | |
| ATAGCACATGAACATGATGC+AGG | - | chr5.3:72460772-72460791 | None:intergenic | 40.0% | |
| ATGTCGTAACTCTAGTCGAT+GGG | + | chr5.3:72461639-72461658 | MS.gene47707:intron | 40.0% | |
| CAAAACCGTCTTGTAAGGTA+AGG | + | chr5.3:72461601-72461620 | MS.gene47707:intron | 40.0% | |
| CAACATGGGATATAAGCCAT+CGG | + | chr5.3:72460320-72460339 | MS.gene47707:CDS | 40.0% | |
| CAAGAACGTTTGTATCCTCA+AGG | + | chr5.3:72460225-72460244 | MS.gene47707:CDS | 40.0% | |
| CAAGGGTTAAGAGTTGAGTT+AGG | - | chr5.3:72461581-72461600 | None:intergenic | 40.0% | |
| CAGACAAATCACGATTGTAG+AGG | - | chr5.3:72460113-72460132 | None:intergenic | 40.0% | |
| CATGTTCATGTGCTATGCAT+TGG | + | chr5.3:72460776-72460795 | MS.gene47707:intron | 40.0% | |
| CCAATCCAAAGAATGTGCAA+AGG | + | chr5.3:72462890-72462909 | MS.gene47707:CDS | 40.0% | |
| CCTTTGCACATTCTTTGGAT+TGG | - | chr5.3:72462893-72462912 | None:intergenic | 40.0% | |
| CTCCTTCCATATGAGTATCT+TGG | - | chr5.3:72462564-72462583 | None:intergenic | 40.0% | |
| CTGTGGATACTGAAGAAAGA+GGG | + | chr5.3:72463028-72463047 | MS.gene47707:CDS | 40.0% | |
| CTTGACTATTAGTGTACCGT+GGG | - | chr5.3:72461245-72461264 | None:intergenic | 40.0% | |
| GAAGTCCTTACCTTACAAGA+CGG | - | chr5.3:72461609-72461628 | None:intergenic | 40.0% | |
| GACTAGAGTTACGACATATG+TGG | - | chr5.3:72461636-72461655 | None:intergenic | 40.0% | |
| GATTGCACCTTTCGGATTTA+AGG | - | chr5.3:72460301-72460320 | None:intergenic | 40.0% | |
| GATTTGTACGAAGACTCTAC+TGG | + | chr5.3:72462712-72462731 | MS.gene47707:CDS | 40.0% | |
| GGAAAGAAAAACGGGGAAAT+AGG | - | chr5.3:72460521-72460540 | None:intergenic | 40.0% | |
| GGAAGGAATTATCAGGAAGA+TGG | + | chr5.3:72460405-72460424 | MS.gene47707:CDS | 40.0% | |
| GGAAGTCTGAATGTTTGACT+GGG | - | chr5.3:72462849-72462868 | None:intergenic | 40.0% | |
| GGGTCTTAACTTAAGGTTCA+CGG | + | chr5.3:72461782-72461801 | MS.gene47707:intron | 40.0% | |
| GTAAAAGAGAGTGAGAAAGC+AGG | - | chr5.3:72462495-72462514 | None:intergenic | 40.0% | |
| GTTGCATGATGTTCATGTTC+AGG | + | chr5.3:72462597-72462616 | MS.gene47707:CDS | 40.0% | |
| TATGTCGTAACTCTAGTCGA+TGG | + | chr5.3:72461638-72461657 | MS.gene47707:intron | 40.0% | |
| TCCCAAGATACTCATATGGA+AGG | + | chr5.3:72462559-72462578 | MS.gene47707:CDS | 40.0% | |
| TCTGTGGATACTGAAGAAAG+AGG | + | chr5.3:72463027-72463046 | MS.gene47707:CDS | 40.0% | |
| TCTGTTGCAGATATGACGTA+CGG | + | chr5.3:72460129-72460148 | MS.gene47707:CDS | 40.0% | |
| TCTGTTGGATATTTGTGCTC+TGG | - | chr5.3:72459847-72459866 | None:intergenic | 40.0% | |
| TCTTGACTATTAGTGTACCG+TGG | - | chr5.3:72461246-72461265 | None:intergenic | 40.0% | |
| TGAACATGATGCAGGTTAGA+TGG | - | chr5.3:72460764-72460783 | None:intergenic | 40.0% | |
| TGGTTCCCAAGATACTCATA+TGG | + | chr5.3:72462555-72462574 | MS.gene47707:CDS | 40.0% | |
| ! | ACCCAAAAAGCTAGCTTAAG+GGG | + | chr5.3:72461703-72461722 | MS.gene47707:intron | 40.0% |
| ! | CAACCCAAAAAGCTAGCTTA+AGG | + | chr5.3:72461701-72461720 | MS.gene47707:intron | 40.0% |
| ! | CAGAAAAGCAAGTTTCTGGA+TGG | + | chr5.3:72459905-72459924 | MS.gene47707:CDS | 40.0% |
| ! | CATATGGAAGGAGTTGACTT+TGG | + | chr5.3:72462571-72462590 | MS.gene47707:CDS | 40.0% |
| ! | CTTACAAGACGGTTTTGCAA+GGG | - | chr5.3:72461598-72461617 | None:intergenic | 40.0% |
| ! | CTTTTCACTGTGGAGATTTC+TGG | - | chr5.3:72462081-72462100 | None:intergenic | 40.0% |
| ! | GTTTTGTCACCGAAGGTTAA+AGG | + | chr5.3:72459927-72459946 | MS.gene47707:CDS | 40.0% |
| ! | TCAATCCAAAGAAAGCGCAA+AGG | + | chr5.3:72462953-72462972 | MS.gene47707:CDS | 40.0% |
| ! | TTCTAGAAATAACCTACCCC+AGG | - | chr5.3:72460724-72460743 | None:intergenic | 40.0% |
| !! | AGATAGATCTCGGTTTGCTA+TGG | + | chr5.3:72460697-72460716 | MS.gene47707:intron | 40.0% |
| !! | GATAGATCTCGGTTTGCTAT+GGG | + | chr5.3:72460698-72460717 | MS.gene47707:intron | 40.0% |
| !! | GCTATCTTCTAGGATGACTA+AGG | + | chr5.3:72463050-72463069 | MS.gene47707:CDS | 40.0% |
| !! | GGCGTTTTGAGCTTTCTTTT+CGG | - | chr5.3:72459715-72459734 | None:intergenic | 40.0% |
| !! | GGGGTAGGTTATTTCTAGAA+TGG | + | chr5.3:72460724-72460743 | MS.gene47707:intron | 40.0% |
| !! | GTCCATATTTTGAGGGTTTG+TGG | + | chr5.3:72461356-72461375 | MS.gene47707:intron | 40.0% |
| !!! | GAGCTTTTAGTTTTAGTGCC+AGG | + | chr5.3:72461009-72461028 | MS.gene47707:intron | 40.0% |
| AAAACGCCTGCACAGCTTAA+GGG | + | chr5.3:72459727-72459746 | MS.gene47707:CDS | 45.0% | |
| AACTTAAGGTTCACGGCACA+GGG | + | chr5.3:72461789-72461808 | MS.gene47707:intron | 45.0% | |
| ACTATTAGTGTACCGTGGGA+TGG | - | chr5.3:72461241-72461260 | None:intergenic | 45.0% | |
| AGGCCAAGATCCATATGAGA+TGG | + | chr5.3:72460245-72460264 | MS.gene47707:CDS | 45.0% | |
| AGTCTGAATGTTTGACTGGG+AGG | - | chr5.3:72462846-72462865 | None:intergenic | 45.0% | |
| ATTTGATCCACTTCCTCCTG+GGG | + | chr5.3:72460446-72460465 | MS.gene47707:CDS | 45.0% | |
| CAAACTGAAGACGCAGTTCA+TGG | + | chr5.3:72460480-72460499 | MS.gene47707:CDS | 45.0% | |
| CATGAACTGCGTCTTCAGTT+TGG | - | chr5.3:72460482-72460501 | None:intergenic | 45.0% | |
| CCATTGCTCTCAACCTCTTT+AGG | - | chr5.3:72460090-72460109 | None:intergenic | 45.0% | |
| CCTAAAGAGGTTGAGAGCAA+TGG | + | chr5.3:72460087-72460106 | MS.gene47707:CDS | 45.0% | |
| CCTTGCAAAACCGTCTTGTA+AGG | + | chr5.3:72461596-72461615 | MS.gene47707:intron | 45.0% | |
| CGATGTGGGGTCTTAACTTA+AGG | + | chr5.3:72461775-72461794 | MS.gene47707:intron | 45.0% | |
| CGGGAACTGGAAAGAAAAAC+GGG | - | chr5.3:72460529-72460548 | None:intergenic | 45.0% | |
| CTACTTACAGAGCTAAGACC+AGG | - | chr5.3:72462108-72462127 | None:intergenic | 45.0% | |
| CTAGAAGGCTCCATCTCATA+TGG | - | chr5.3:72460258-72460277 | None:intergenic | 45.0% | |
| CTTCCACCCTTAAATCCGAA+AGG | + | chr5.3:72460291-72460310 | MS.gene47707:CDS | 45.0% | |
| GAAGAGCAGGATCAGCAATA+TGG | - | chr5.3:72462050-72462069 | None:intergenic | 45.0% | |
| GAATTTGATCCACTTCCTCC+TGG | + | chr5.3:72460444-72460463 | MS.gene47707:CDS | 45.0% | |
| GCAGGATCAGCAATATGGTA+TGG | - | chr5.3:72462045-72462064 | None:intergenic | 45.0% | |
| GCTCCATCTCATATGGATCT+TGG | - | chr5.3:72460251-72460270 | None:intergenic | 45.0% | |
| GGGAACTGGAAAGAAAAACG+GGG | - | chr5.3:72460528-72460547 | None:intergenic | 45.0% | |
| GGGAAGTCTGAATGTTTGAC+TGG | - | chr5.3:72462850-72462869 | None:intergenic | 45.0% | |
| TAACTTAAGGTTCACGGCAC+AGG | + | chr5.3:72461788-72461807 | MS.gene47707:intron | 45.0% | |
| TCACTCCTTTGCGCTTTCTT+TGG | - | chr5.3:72462961-72462980 | None:intergenic | 45.0% | |
| TCGTGTGGAAGCAGTAAACA+TGG | + | chr5.3:72460045-72460064 | MS.gene47707:CDS | 45.0% | |
| TCTGGAGAATTCAGAAGAGC+AGG | - | chr5.3:72462063-72462082 | None:intergenic | 45.0% | |
| TTCATCGTAGCTAAGGTGCA+AGG | + | chr5.3:72461904-72461923 | MS.gene47707:intron | 45.0% | |
| ! | CCCATGTTGATTGCACCTTT+CGG | - | chr5.3:72460309-72460328 | None:intergenic | 45.0% |
| ! | CCGAAAGGTGCAATCAACAT+GGG | + | chr5.3:72460306-72460325 | MS.gene47707:CDS | 45.0% |
| ! | CCTTACAAGACGGTTTTGCA+AGG | - | chr5.3:72461599-72461618 | None:intergenic | 45.0% |
| ! | TCCGAAAGGTGCAATCAACA+TGG | + | chr5.3:72460305-72460324 | MS.gene47707:CDS | 45.0% |
| !! | AGTAATGCCAGTCGTTTTCC+TGG | + | chr5.3:72462673-72462692 | MS.gene47707:CDS | 45.0% |
| !! | TCATATGGATCTTGGCCTTG+AGG | - | chr5.3:72460243-72460262 | None:intergenic | 45.0% |
| !!! | GCCCCTTAAGCTAGCTTTTT+GGG | - | chr5.3:72461707-72461726 | None:intergenic | 45.0% |
| !!! | AATTTTTTAATATTTGTATT+TGG | + | chr5.3:72461097-72461116 | MS.gene47707:intron | 5.0% |
| ACCATATGCCCACTCGATGT+GGG | + | chr5.3:72461761-72461780 | MS.gene47707:intron | 50.0% | |
| AGTTAAGACCCCACATCGAG+TGG | - | chr5.3:72461773-72461792 | None:intergenic | 50.0% | |
| CAAAACGCCTGCACAGCTTA+AGG | + | chr5.3:72459726-72459745 | MS.gene47707:CDS | 50.0% | |
| CAGGAAGATGGTCCACTACT+TGG | + | chr5.3:72460417-72460436 | MS.gene47707:CDS | 50.0% | |
| CATAGGAAGGATTCCAAGCG+TGG | + | chr5.3:72462763-72462782 | MS.gene47707:CDS | 50.0% | |
| CCACAATTCTCGAGGTTCTG+TGG | + | chr5.3:72463011-72463030 | MS.gene47707:CDS | 50.0% | |
| CCACAGAACCTCGAGAATTG+TGG | - | chr5.3:72463014-72463033 | None:intergenic | 50.0% | |
| CTGAAGACGCAGTTCATGGT+AGG | + | chr5.3:72460484-72460503 | MS.gene47707:intron | 50.0% | |
| GAGCGTGAAGTCTGCAGTAA+TGG | + | chr5.3:72461487-72461506 | MS.gene47707:intron | 50.0% | |
| GCACCTTTCGGATTTAAGGG+TGG | - | chr5.3:72460297-72460316 | None:intergenic | 50.0% | |
| GGACGACAAGATCGTTCAAG+CGG | + | chr5.3:72459985-72460004 | MS.gene47707:CDS | 50.0% | |
| GTTAAGACCCCACATCGAGT+GGG | - | chr5.3:72461772-72461791 | None:intergenic | 50.0% | |
| GTTTGGCATTCAAATGCCCC+AGG | - | chr5.3:72460465-72460484 | None:intergenic | 50.0% | |
| TCCAATCCCTTAAGCTGTGC+AGG | - | chr5.3:72459736-72459755 | None:intergenic | 50.0% | |
| TCCACAGTGAAAAGTCGACC+TGG | + | chr5.3:72462087-72462106 | MS.gene47707:CDS | 50.0% | |
| TCTAAGGAAGAGTTCCTGCC+AGG | - | chr5.3:72462694-72462713 | None:intergenic | 50.0% | |
| ! | GATTCCAAGCGTGGTGTTGA+GGG | + | chr5.3:72462772-72462791 | MS.gene47707:CDS | 50.0% |
| !! | ACCAGGTCGACTTTTCACTG+TGG | - | chr5.3:72462091-72462110 | None:intergenic | 50.0% |
| !!! | CGCCCCTTAAGCTAGCTTTT+TGG | - | chr5.3:72461708-72461727 | None:intergenic | 50.0% |
| !!! | CTGGATGGTTTTGTCACCGA+AGG | + | chr5.3:72459920-72459939 | MS.gene47707:CDS | 50.0% |
| CAGATATGACGTACGGACGC+AGG | + | chr5.3:72460136-72460155 | MS.gene47707:CDS | 55.0% | |
| CATACCCTCAACACCACGCT+TGG | - | chr5.3:72462779-72462798 | None:intergenic | 55.0% | |
| CCATATGCCCACTCGATGTG+GGG | + | chr5.3:72461762-72461781 | MS.gene47707:intron | 55.0% | |
| GACCATATGCCCACTCGATG+TGG | + | chr5.3:72461760-72461779 | MS.gene47707:intron | 55.0% | |
| GCCTGCACAGCTTAAGGGAT+TGG | + | chr5.3:72459732-72459751 | MS.gene47707:CDS | 55.0% | |
| GGACTTGGGCAAGATTCGTG+TGG | + | chr5.3:72460030-72460049 | MS.gene47707:CDS | 55.0% | |
| GTTCCTGCCAGGAAAACGAC+TGG | - | chr5.3:72462683-72462702 | None:intergenic | 55.0% | |
| TCAAATGCCCCAGGAGGAAG+TGG | - | chr5.3:72460456-72460475 | None:intergenic | 55.0% | |
| TGGCATTCAAATGCCCCAGG+AGG | - | chr5.3:72460462-72460481 | None:intergenic | 55.0% | |
| ! | AGGATCGTGGCAGTGGACTT+GGG | + | chr5.3:72460016-72460035 | MS.gene47707:CDS | 55.0% |
| ! | GGATTCCAAGCGTGGTGTTG+AGG | + | chr5.3:72462771-72462790 | MS.gene47707:CDS | 55.0% |
| !! | ATCTCGGTTTGCTATGGGCC+TGG | + | chr5.3:72460703-72460722 | MS.gene47707:intron | 55.0% |
| !! | ATGCCAGTCGTTTTCCTGGC+AGG | + | chr5.3:72462677-72462696 | MS.gene47707:CDS | 55.0% |
| !! | TAGGTTCTAGGCTGGACCTC+TGG | + | chr5.3:72461465-72461484 | MS.gene47707:intron | 55.0% |
| !! | TCGTTCAAGCGGTGTCATCC+AGG | + | chr5.3:72459996-72460015 | MS.gene47707:CDS | 55.0% |
| !! | TCTCGGTTTGCTATGGGCCT+GGG | + | chr5.3:72460704-72460723 | MS.gene47707:intron | 55.0% |
| CAAGTCCACTGCCACGATCC+TGG | - | chr5.3:72460017-72460036 | None:intergenic | 60.0% | |
| CCCCACATCGAGTGGGCATA+TGG | - | chr5.3:72461765-72461784 | None:intergenic | 60.0% | |
| CTGCAGACTTCACGCTCCAG+AGG | - | chr5.3:72461484-72461503 | None:intergenic | 60.0% | |
| GTCATCCAGGATCGTGGCAG+TGG | + | chr5.3:72460009-72460028 | MS.gene47707:CDS | 60.0% | |
| ! | CAGGATCGTGGCAGTGGACT+TGG | + | chr5.3:72460015-72460034 | MS.gene47707:CDS | 60.0% |
| !! | AGCGGTGTCATCCAGGATCG+TGG | + | chr5.3:72460003-72460022 | MS.gene47707:CDS | 60.0% |
| !! | CTCGGTTTGCTATGGGCCTG+GGG | + | chr5.3:72460705-72460724 | MS.gene47707:intron | 60.0% |
| !! | GTTTGCTATGGGCCTGGGGT+AGG | + | chr5.3:72460709-72460728 | MS.gene47707:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 72459622 | 72463080 | 72459622 | ID=MS.gene47707 |
| chr5.3 | mRNA | 72459622 | 72463080 | 72459622 | ID=MS.gene47707.t1;Parent=MS.gene47707 |
| chr5.3 | exon | 72459622 | 72459769 | 72459622 | ID=MS.gene47707.t1.exon1;Parent=MS.gene47707.t1 |
| chr5.3 | CDS | 72459622 | 72459769 | 72459622 | ID=cds.MS.gene47707.t1;Parent=MS.gene47707.t1 |
| chr5.3 | exon | 72459848 | 72460501 | 72459848 | ID=MS.gene47707.t1.exon2;Parent=MS.gene47707.t1 |
| chr5.3 | CDS | 72459848 | 72460501 | 72459848 | ID=cds.MS.gene47707.t1;Parent=MS.gene47707.t1 |
| chr5.3 | exon | 72462040 | 72462119 | 72462040 | ID=MS.gene47707.t1.exon3;Parent=MS.gene47707.t1 |
| chr5.3 | CDS | 72462040 | 72462119 | 72462040 | ID=cds.MS.gene47707.t1;Parent=MS.gene47707.t1 |
| chr5.3 | exon | 72462529 | 72463080 | 72462529 | ID=MS.gene47707.t1.exon4;Parent=MS.gene47707.t1 |
| chr5.3 | CDS | 72462529 | 72463080 | 72462529 | ID=cds.MS.gene47707.t1;Parent=MS.gene47707.t1 |
| Gene Sequence |
| Protein sequence |
