Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059870.t1 | XP_013464759.1 | 93.8 | 211 | 7 | 3 | 1 | 208 | 1 | 208 | 1.10E-99 | 372.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059870.t1 | A0A072V9S8 | 93.8 | 211 | 7 | 3 | 1 | 208 | 1 | 208 | 7.6e-100 | 372.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052414 | MS.gene059870 | 0.818086 | 2.35E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene059870 | 0.805724 | 1.16E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene059870 | 0.80459 | 2.01E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene059870 | 0.807963 | 3.91E-50 | -1.69E-46 |
| MS.gene056514 | MS.gene059870 | 0.801269 | 9.75E-49 | -1.69E-46 |
| MS.gene058075 | MS.gene059870 | 0.81898 | 1.48E-52 | -1.69E-46 |
| MS.gene059870 | MS.gene065164 | 0.808758 | 2.65E-50 | -1.69E-46 |
| MS.gene059870 | MS.gene065166 | 0.882383 | 1.09E-70 | -1.69E-46 |
| MS.gene059870 | MS.gene069384 | 0.899801 | 1.38E-77 | -1.69E-46 |
| MS.gene059870 | MS.gene069717 | 0.802865 | 4.58E-49 | -1.69E-46 |
| MS.gene059870 | MS.gene070318 | 0.821217 | 4.54E-53 | -1.69E-46 |
| MS.gene059870 | MS.gene070956 | 0.818201 | 2.22E-52 | -1.69E-46 |
| MS.gene059870 | MS.gene072847 | 0.802363 | 5.81E-49 | -1.69E-46 |
| MS.gene059870 | MS.gene09658 | 0.81892 | 1.52E-52 | -1.69E-46 |
| MS.gene059870 | MS.gene21571 | 0.808488 | 3.02E-50 | -1.69E-46 |
| MS.gene059870 | MS.gene28490 | 0.810387 | 1.18E-50 | -1.69E-46 |
| MS.gene059870 | MS.gene30932 | 0.838121 | 3.47E-57 | -1.69E-46 |
| MS.gene059870 | MS.gene31178 | 0.861946 | 7.18E-64 | -1.69E-46 |
| MS.gene059870 | MS.gene32865 | 0.810262 | 1.26E-50 | -1.69E-46 |
| MS.gene059870 | MS.gene36105 | 0.831702 | 1.44E-55 | -1.69E-46 |
| MS.gene059870 | MS.gene36309 | 0.801306 | 9.58E-49 | -1.69E-46 |
| MS.gene059870 | MS.gene38802 | 0.812501 | 4.11E-51 | -1.69E-46 |
| MS.gene059870 | MS.gene42746 | 0.802673 | 5.02E-49 | -1.69E-46 |
| MS.gene059870 | MS.gene45469 | 0.864336 | 1.31E-64 | -1.69E-46 |
| MS.gene059870 | MS.gene47820 | 0.81159 | 6.49E-51 | -1.69E-46 |
| MS.gene059870 | MS.gene47821 | 0.814055 | 1.87E-51 | -1.69E-46 |
| MS.gene059870 | MS.gene47843 | 0.80834 | 3.25E-50 | -1.69E-46 |
| MS.gene059870 | MS.gene49510 | 0.810666 | 1.03E-50 | -1.69E-46 |
| MS.gene059870 | MS.gene52997 | 0.808779 | 2.62E-50 | -1.69E-46 |
| MS.gene059870 | MS.gene62822 | 0.831396 | 1.71E-55 | -1.69E-46 |
| MS.gene059870 | MS.gene76490 | 0.814742 | 1.32E-51 | -1.69E-46 |
| MS.gene059870 | MS.gene77474 | 0.840485 | 8.45E-58 | -1.69E-46 |
| MS.gene059870 | MS.gene77754 | 0.823971 | 1.04E-53 | -1.69E-46 |
| MS.gene059870 | MS.gene87404 | 0.811392 | 7.16E-51 | -1.69E-46 |
| MS.gene059870 | MS.gene98032 | 0.809838 | 1.55E-50 | -1.69E-46 |
| MS.gene059870 | MS.gene98798 | 0.80192 | 7.17E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059870.t1 | MTR_2g080040 | 91.981 | 212 | 11 | 3 | 1 | 209 | 1 | 209 | 6.71e-126 | 360 |
| MS.gene059870.t1 | MTR_2g090155 | 72.152 | 79 | 22 | 0 | 131 | 209 | 77 | 155 | 2.35e-36 | 130 |
| MS.gene059870.t1 | MTR_2g090155 | 71.605 | 81 | 23 | 0 | 131 | 211 | 77 | 157 | 2.61e-36 | 130 |
| MS.gene059870.t1 | MTR_2g090155 | 72.152 | 79 | 22 | 0 | 131 | 209 | 77 | 155 | 3.04e-36 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059870.t1 | AT1G52870 | 52.113 | 213 | 83 | 6 | 2 | 209 | 4 | 202 | 2.59e-62 | 196 |
| MS.gene059870.t1 | AT1G52870 | 52.113 | 213 | 83 | 6 | 2 | 209 | 4 | 202 | 1.38e-61 | 196 |
| MS.gene059870.t1 | AT4G03410 | 69.663 | 89 | 27 | 0 | 121 | 209 | 72 | 160 | 9.01e-41 | 141 |
| MS.gene059870.t1 | AT4G03410 | 69.663 | 89 | 27 | 0 | 121 | 209 | 72 | 160 | 1.12e-40 | 142 |
Find 39 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTATTGATAGTGATTAT+TGG | 0.193346 | 2.2:+15326904 | MS.gene059870:CDS |
| GCTAGTATTGTTCTTGTTGC+TGG | 0.288636 | 2.2:+15326858 | MS.gene059870:CDS |
| ACGACGCAAGTGAATGGATT+TGG | 0.380452 | 2.2:+15326720 | MS.gene059870:CDS |
| ACACAACTGGTTAGCTTATG+AGG | 0.392465 | 2.2:+15327797 | MS.gene059870:CDS |
| TTGTTTATTCTGTAGGAGAC+TGG | 0.418497 | 2.2:+15327868 | MS.gene059870:CDS |
| TCACTATCAAACCTTCTTGC+TGG | 0.438486 | 2.2:-15326653 | None:intergenic |
| TTGCCAAGATGGTGATTAGC+GGG | 0.450889 | 2.2:+15327844 | MS.gene059870:CDS |
| TTAGTGGAGAATCTTGATAC+TGG | 0.460029 | 2.2:-15326540 | None:intergenic |
| TGAAGAGAATGTGGAGAGTG+TGG | 0.488302 | 2.2:+15326809 | MS.gene059870:CDS |
| GATATGCACCTCTACACAAC+TGG | 0.490397 | 2.2:+15327784 | MS.gene059870:CDS |
| AATGGATTTGGAGCGAATGA+AGG | 0.492577 | 2.2:+15326732 | MS.gene059870:CDS |
| TCGAGTGCTTCGGGTTTGGT+TGG | 0.494003 | 2.2:+15326777 | MS.gene059870:CDS |
| GTGACGACGACGCAAGTGAA+TGG | 0.496360 | 2.2:+15326714 | MS.gene059870:CDS |
| AACCCCGCTAATCACCATCT+TGG | 0.520776 | 2.2:-15327847 | None:intergenic |
| GAAGGTTTGTTATCGTTGGA+AGG | 0.524445 | 2.2:+15326750 | MS.gene059870:CDS |
| AGCGGGGTTGTTTATTCTGT+AGG | 0.524576 | 2.2:+15327861 | MS.gene059870:CDS |
| GATAGTGAGCCGTGTGGAGA+TGG | 0.547654 | 2.2:+15326668 | MS.gene059870:CDS |
| GGAAGCTCTCAAGACAAATC+CGG | 0.548802 | 2.2:+15327818 | MS.gene059870:CDS |
| GAGGAAAGTGTGGTGAGGTA+CGG | 0.563573 | 2.2:-15326466 | None:intergenic |
| GAATGAAGGTTTGTTATCGT+TGG | 0.563825 | 2.2:+15326746 | MS.gene059870:CDS |
| GATATTACAGACCAGCAAGA+AGG | 0.585948 | 2.2:+15326642 | MS.gene059870:CDS |
| TTGGTGTGGAAATTGAAGGG+AGG | 0.587765 | 2.2:-15326485 | None:intergenic |
| TTTGCCAAGATGGTGATTAG+CGG | 0.591010 | 2.2:+15327843 | MS.gene059870:CDS |
| TAATGAGAATGAAGAGAATG+TGG | 0.602012 | 2.2:+15326800 | MS.gene059870:CDS |
| TGTAGGAGACTGGATTGCAC+AGG | 0.610678 | 2.2:+15327878 | MS.gene059870:CDS |
| AGGTGGAGATGGTGAATTAG+CGG | 0.614566 | 2.2:+15326692 | MS.gene059870:CDS |
| GTGGAGATGGAAGGTGGAGA+TGG | 0.619496 | 2.2:+15326681 | MS.gene059870:CDS |
| GTGAGGTACGGTGCTGTGAA+CGG | 0.621994 | 2.2:-15326454 | None:intergenic |
| TAAGCTAACCAGTTGTGTAG+AGG | 0.623564 | 2.2:-15327792 | None:intergenic |
| AGCCGTGTGGAGATGGAAGG+TGG | 0.639866 | 2.2:+15326675 | MS.gene059870:CDS |
| CTCCACCTTCCATCTCCACA+CGG | 0.651428 | 2.2:-15326677 | None:intergenic |
| AAATTGAAGGGAGGAAAGTG+TGG | 0.659597 | 2.2:-15326476 | None:intergenic |
| GAATTTCACAAAACGTGCAG+CGG | 0.660249 | 2.2:+15326566 | MS.gene059870:CDS |
| GTGAGCCGTGTGGAGATGGA+AGG | 0.660357 | 2.2:+15326672 | MS.gene059870:CDS |
| GAAGGGAGGAAAGTGTGGTG+AGG | 0.665797 | 2.2:-15326471 | None:intergenic |
| TGCCAAGATGGTGATTAGCG+GGG | 0.667655 | 2.2:+15327845 | MS.gene059870:CDS |
| GGTAGCGACGAAAGTATCAA+CGG | 0.696411 | 2.2:+15326587 | MS.gene059870:CDS |
| AGGTTTGATAGTGAGCCGTG+TGG | 0.739464 | 2.2:+15326662 | MS.gene059870:CDS |
| AGCGACGAAAGTATCAACGG+AGG | 0.758121 | 2.2:+15326590 | MS.gene059870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATAAAACATAACGTAA+AGG | - | chr2.2:15327126-15327145 | None:intergenic | 15.0% |
| !! | CATATGGAAAAATATTTGTT+TGG | + | chr2.2:15327454-15327473 | MS.gene059870:intron | 20.0% |
| !! | GATTTGGAAATGATTAAATT+TGG | + | chr2.2:15326993-15327012 | MS.gene059870:intron | 20.0% |
| !! | TAAACTTCTCATTCAAAATT+AGG | + | chr2.2:15327365-15327384 | MS.gene059870:intron | 20.0% |
| !!! | AAATATTTTTCCATATGCAT+TGG | - | chr2.2:15327451-15327470 | None:intergenic | 20.0% |
| !!! | AATTTGCAATTTTATAGACT+AGG | + | chr2.2:15327041-15327060 | MS.gene059870:intron | 20.0% |
| !!! | CAACTTTAAATTAGCTTATA+AGG | - | chr2.2:15327595-15327614 | None:intergenic | 20.0% |
| !!! | CTTATAAGCTAATTTAAAGT+TGG | + | chr2.2:15327593-15327612 | MS.gene059870:intron | 20.0% |
| !!! | TTACTATTGATAGTGATTAT+TGG | + | chr2.2:15326904-15326923 | MS.gene059870:CDS | 20.0% |
| ! | CAAGATAATCAAATTTGACT+GGG | - | chr2.2:15327693-15327712 | None:intergenic | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | - | chr2.2:15327233-15327252 | None:intergenic | 25.0% |
| ! | TCAAGATAATCAAATTTGAC+TGG | - | chr2.2:15327694-15327713 | None:intergenic | 25.0% |
| !! | CACGTTTAAATTAGCTTATT+TGG | - | chr2.2:15327638-15327657 | None:intergenic | 25.0% |
| !!! | TTGGAAATGGATTTTGATTT+TGG | - | chr2.2:15326507-15326526 | None:intergenic | 25.0% |
| AAAATAAGTCAATCCAAACC+TGG | - | chr2.2:15327067-15327086 | None:intergenic | 30.0% | |
| AATCACTATACTGTTTGGAT+TGG | - | chr2.2:15327308-15327327 | None:intergenic | 30.0% | |
| TAATGAGAATGAAGAGAATG+TGG | + | chr2.2:15326800-15326819 | MS.gene059870:CDS | 30.0% | |
| TCCAAACAGTATAGTGATTA+TGG | + | chr2.2:15327309-15327328 | MS.gene059870:intron | 30.0% | |
| ! | TGAATTTTTCCTTATCTGCT+AGG | + | chr2.2:15327711-15327730 | MS.gene059870:intron | 30.0% |
| !! | ATTTTGGTGTGGAAATTGAA+GGG | - | chr2.2:15326491-15326510 | None:intergenic | 30.0% |
| !! | TTTTGTGAAATTCGGATTAG+TGG | - | chr2.2:15326559-15326578 | None:intergenic | 30.0% |
| !!! | AATGGATTTTGATTTTGGTG+TGG | - | chr2.2:15326502-15326521 | None:intergenic | 30.0% |
| !!! | CGAAGAACTATACTTTTTCT+TGG | - | chr2.2:15327557-15327576 | None:intergenic | 30.0% |
| !!! | GTTTTTAGCATATGCAAAAC+TGG | - | chr2.2:15327281-15327300 | None:intergenic | 30.0% |
| AACACAAATCCTAGCAGATA+AGG | - | chr2.2:15327723-15327742 | None:intergenic | 35.0% | |
| AGTCTATACATTTGCATGCA+GGG | + | chr2.2:15327522-15327541 | MS.gene059870:intron | 35.0% | |
| CAAATTTGACTGGGTATACA+GGG | - | chr2.2:15327684-15327703 | None:intergenic | 35.0% | |
| GCCATAATCACTATACTGTT+TGG | - | chr2.2:15327313-15327332 | None:intergenic | 35.0% | |
| GGCTAATCTAAATTAGCAAC+TGG | - | chr2.2:15327663-15327682 | None:intergenic | 35.0% | |
| TAGTCTATACATTTGCATGC+AGG | + | chr2.2:15327521-15327540 | MS.gene059870:intron | 35.0% | |
| TCAAATTTGACTGGGTATAC+AGG | - | chr2.2:15327685-15327704 | None:intergenic | 35.0% | |
| TGTGTGTGATTCTTTGGATT+TGG | + | chr2.2:15326977-15326996 | MS.gene059870:intron | 35.0% | |
| TTAGGTCATAGTTACCAACT+TGG | + | chr2.2:15327383-15327402 | MS.gene059870:intron | 35.0% | |
| TTAGTGGAGAATCTTGATAC+TGG | - | chr2.2:15326543-15326562 | None:intergenic | 35.0% | |
| TTGTTTATTCTGTAGGAGAC+TGG | + | chr2.2:15327868-15327887 | MS.gene059870:CDS | 35.0% | |
| ! | CTTGATACTGGAAAGTTTTG+TGG | - | chr2.2:15326531-15326550 | None:intergenic | 35.0% |
| !! | AAAGTTTTGTGGCTTGGAAA+TGG | - | chr2.2:15326520-15326539 | None:intergenic | 35.0% |
| !! | GAATGAAGGTTTGTTATCGT+TGG | + | chr2.2:15326746-15326765 | MS.gene059870:CDS | 35.0% |
| !! | GATTTTGGTGTGGAAATTGA+AGG | - | chr2.2:15326492-15326511 | None:intergenic | 35.0% |
| AAATTGAAGGGAGGAAAGTG+TGG | - | chr2.2:15326479-15326498 | None:intergenic | 40.0% | |
| ATCACCATCTTGGCAAAAAC+CGG | - | chr2.2:15327840-15327859 | None:intergenic | 40.0% | |
| CTGCTAGGATTTGTGTTTCT+TGG | + | chr2.2:15327726-15327745 | MS.gene059870:intron | 40.0% | |
| GAATTTCACAAAACGTGCAG+CGG | + | chr2.2:15326566-15326585 | MS.gene059870:CDS | 40.0% | |
| GATATTACAGACCAGCAAGA+AGG | + | chr2.2:15326642-15326661 | MS.gene059870:CDS | 40.0% | |
| GCTAGAAATCGACACAAACT+TGG | - | chr2.2:15327335-15327354 | None:intergenic | 40.0% | |
| GCTAGTATTGTTCTTGTTGC+TGG | + | chr2.2:15326858-15326877 | MS.gene059870:CDS | 40.0% | |
| TAAGCTAACCAGTTGTGTAG+AGG | - | chr2.2:15327795-15327814 | None:intergenic | 40.0% | |
| TATACATTTGCATGCAGGGA+GGG | + | chr2.2:15327526-15327545 | MS.gene059870:intron | 40.0% | |
| TCACTATCAAACCTTCTTGC+TGG | - | chr2.2:15326656-15326675 | None:intergenic | 40.0% | |
| TGTGTGTGTGTGTGATTCTT+TGG | + | chr2.2:15326971-15326990 | MS.gene059870:intron | 40.0% | |
| TTTATAGACTAGGCCAGGTT+TGG | + | chr2.2:15327051-15327070 | MS.gene059870:intron | 40.0% | |
| TTTGCCAAGATGGTGATTAG+CGG | + | chr2.2:15327843-15327862 | MS.gene059870:CDS | 40.0% | |
| ! | AAATCCGGTTTTTGCCAAGA+TGG | + | chr2.2:15327833-15327852 | MS.gene059870:CDS | 40.0% |
| ! | AATGGATTTGGAGCGAATGA+AGG | + | chr2.2:15326732-15326751 | MS.gene059870:CDS | 40.0% |
| ! | GCAATTTTATAGACTAGGCC+AGG | + | chr2.2:15327046-15327065 | MS.gene059870:intron | 40.0% |
| ! | GCTGCACGTTTTGTGAAATT+CGG | - | chr2.2:15326567-15326586 | None:intergenic | 40.0% |
| ! | TTTCCATATGCATTGGCCAA+GGG | - | chr2.2:15327444-15327463 | None:intergenic | 40.0% |
| !! | ACACAACTGGTTAGCTTATG+AGG | + | chr2.2:15327797-15327816 | MS.gene059870:CDS | 40.0% |
| !! | GAAGGTTTGTTATCGTTGGA+AGG | + | chr2.2:15326750-15326769 | MS.gene059870:CDS | 40.0% |
| !! | GTGTTTCTTGGTGCTATGTA+GGG | + | chr2.2:15327738-15327757 | MS.gene059870:intron | 40.0% |
| !! | GTTTGTGTCGATTTCTAGCT+TGG | + | chr2.2:15327336-15327355 | MS.gene059870:intron | 40.0% |
| !! | TACTGGAAAGTTTTGTGGCT+TGG | - | chr2.2:15326526-15326545 | None:intergenic | 40.0% |
| !! | TGTGTTTCTTGGTGCTATGT+AGG | + | chr2.2:15327737-15327756 | MS.gene059870:intron | 40.0% |
| !! | TTTTCCATATGCATTGGCCA+AGG | - | chr2.2:15327445-15327464 | None:intergenic | 40.0% |
| AGCGGGGTTGTTTATTCTGT+AGG | + | chr2.2:15327861-15327880 | MS.gene059870:CDS | 45.0% | |
| AGGTGGAGATGGTGAATTAG+CGG | + | chr2.2:15326692-15326711 | MS.gene059870:CDS | 45.0% | |
| CTATACATTTGCATGCAGGG+AGG | + | chr2.2:15327525-15327544 | MS.gene059870:intron | 45.0% | |
| GATATGCACCTCTACACAAC+TGG | + | chr2.2:15327784-15327803 | MS.gene059870:CDS | 45.0% | |
| GGAAGCTCTCAAGACAAATC+CGG | + | chr2.2:15327818-15327837 | MS.gene059870:CDS | 45.0% | |
| TGAAGAGAATGTGGAGAGTG+TGG | + | chr2.2:15326809-15326828 | MS.gene059870:CDS | 45.0% | |
| TTGCCAAGATGGTGATTAGC+GGG | + | chr2.2:15327844-15327863 | MS.gene059870:CDS | 45.0% | |
| TTGGTGTGGAAATTGAAGGG+AGG | - | chr2.2:15326488-15326507 | None:intergenic | 45.0% | |
| ! | ACGACGCAAGTGAATGGATT+TGG | + | chr2.2:15326720-15326739 | MS.gene059870:CDS | 45.0% |
| !! | ACTTGAGTTGATCGATCCCT+TGG | + | chr2.2:15327425-15327444 | MS.gene059870:intron | 45.0% |
| !! | GGTAGCGACGAAAGTATCAA+CGG | + | chr2.2:15326587-15326606 | MS.gene059870:CDS | 45.0% |
| !! | TTCTTGGTGCTATGTAGGGA+TGG | + | chr2.2:15327742-15327761 | MS.gene059870:intron | 45.0% |
| !!! | GAAGGTTTTTCGAGTGCTTC+GGG | + | chr2.2:15326768-15326787 | MS.gene059870:CDS | 45.0% |
| !!! | GGAAGGTTTTTCGAGTGCTT+CGG | + | chr2.2:15326767-15326786 | MS.gene059870:CDS | 45.0% |
| !!! | TTTTTCGAGTGCTTCGGGTT+TGG | + | chr2.2:15326773-15326792 | MS.gene059870:CDS | 45.0% |
| AACCCCGCTAATCACCATCT+TGG | - | chr2.2:15327850-15327869 | None:intergenic | 50.0% | |
| GATCCCTTGGCCAATGCATA+TGG | + | chr2.2:15327438-15327457 | MS.gene059870:intron | 50.0% | |
| TGCCAAGATGGTGATTAGCG+GGG | + | chr2.2:15327845-15327864 | MS.gene059870:CDS | 50.0% | |
| TGTAGGAGACTGGATTGCAC+AGG | + | chr2.2:15327878-15327897 | MS.gene059870:CDS | 50.0% | |
| ! | GAGGAAAGTGTGGTGAGGTA+CGG | - | chr2.2:15326469-15326488 | None:intergenic | 50.0% |
| !! | AGCGACGAAAGTATCAACGG+AGG | + | chr2.2:15326590-15326609 | MS.gene059870:CDS | 50.0% |
| !! | AGGTTTGATAGTGAGCCGTG+TGG | + | chr2.2:15326662-15326681 | MS.gene059870:CDS | 50.0% |
| CTCCACCTTCCATCTCCACA+CGG | - | chr2.2:15326680-15326699 | None:intergenic | 55.0% | |
| GATAGTGAGCCGTGTGGAGA+TGG | + | chr2.2:15326668-15326687 | MS.gene059870:CDS | 55.0% | |
| GTGACGACGACGCAAGTGAA+TGG | + | chr2.2:15326714-15326733 | MS.gene059870:CDS | 55.0% | |
| GTGGAGATGGAAGGTGGAGA+TGG | + | chr2.2:15326681-15326700 | MS.gene059870:CDS | 55.0% | |
| ! | GAAGGGAGGAAAGTGTGGTG+AGG | - | chr2.2:15326474-15326493 | None:intergenic | 55.0% |
| ! | TCGAGTGCTTCGGGTTTGGT+TGG | + | chr2.2:15326777-15326796 | MS.gene059870:CDS | 55.0% |
| !! | GTGAGGTACGGTGCTGTGAA+CGG | - | chr2.2:15326457-15326476 | None:intergenic | 55.0% |
| AGCCGTGTGGAGATGGAAGG+TGG | + | chr2.2:15326675-15326694 | MS.gene059870:CDS | 60.0% | |
| CCACTCGCGTCACACCAAGT+TGG | - | chr2.2:15327400-15327419 | None:intergenic | 60.0% | |
| GTGAGCCGTGTGGAGATGGA+AGG | + | chr2.2:15326672-15326691 | MS.gene059870:CDS | 60.0% | |
| !! | CCAACTTGGTGTGACGCGAG+TGG | + | chr2.2:15327397-15327416 | MS.gene059870:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 15326447 | 15327935 | 15326447 | ID=MS.gene059870 |
| chr2.2 | mRNA | 15326447 | 15327935 | 15326447 | ID=MS.gene059870.t1;Parent=MS.gene059870 |
| chr2.2 | exon | 15326447 | 15326929 | 15326447 | ID=MS.gene059870.t1.exon1;Parent=MS.gene059870.t1 |
| chr2.2 | CDS | 15326447 | 15326929 | 15326447 | ID=cds.MS.gene059870.t1;Parent=MS.gene059870.t1 |
| chr2.2 | exon | 15327759 | 15327935 | 15327759 | ID=MS.gene059870.t1.exon2;Parent=MS.gene059870.t1 |
| chr2.2 | CDS | 15327759 | 15327935 | 15327759 | ID=cds.MS.gene059870.t1;Parent=MS.gene059870.t1 |
| Gene Sequence |
| Protein sequence |
