Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48244.t1 | XP_024638077.1 | 89.4 | 472 | 47 | 1 | 57 | 525 | 361 | 832 | 1.40E-223 | 785.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48244.t1 | A0A396I3C8 | 89.4 | 472 | 47 | 1 | 57 | 525 | 450 | 921 | 1.0e-223 | 785.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049501 | MS.gene48244 | 0.828662 | 7.94E-55 | -1.69E-46 |
| MS.gene049647 | MS.gene48244 | 0.804806 | 1.81E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene48244 | 0.802634 | 5.11E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene48244 | 0.806921 | 6.50E-50 | -1.69E-46 |
| MS.gene050303 | MS.gene48244 | 0.800398 | 1.47E-48 | -1.69E-46 |
| MS.gene050719 | MS.gene48244 | 0.827527 | 1.49E-54 | -1.69E-46 |
| MS.gene050721 | MS.gene48244 | 0.834132 | 3.58E-56 | -1.69E-46 |
| MS.gene050724 | MS.gene48244 | 0.810844 | 9.42E-51 | -1.69E-46 |
| MS.gene050780 | MS.gene48244 | 0.816771 | 4.66E-52 | -1.69E-46 |
| MS.gene050844 | MS.gene48244 | 0.800878 | 1.17E-48 | -1.69E-46 |
| MS.gene051247 | MS.gene48244 | 0.815607 | 8.48E-52 | -1.69E-46 |
| MS.gene052012 | MS.gene48244 | 0.808999 | 2.35E-50 | -1.69E-46 |
| MS.gene052384 | MS.gene48244 | 0.809005 | 2.34E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene48244 | 0.815208 | 1.04E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene48244 | 0.808181 | 3.51E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene48244 | 0.812512 | 4.08E-51 | -1.69E-46 |
| MS.gene057140 | MS.gene48244 | 0.802485 | 5.49E-49 | -1.69E-46 |
| MS.gene058084 | MS.gene48244 | 0.807737 | 4.37E-50 | -1.69E-46 |
| MS.gene058829 | MS.gene48244 | 0.801335 | 9.45E-49 | -1.69E-46 |
| MS.gene058906 | MS.gene48244 | 0.819978 | 8.74E-53 | -1.69E-46 |
| MS.gene059220 | MS.gene48244 | 0.820388 | 7.04E-53 | -1.69E-46 |
| MS.gene059249 | MS.gene48244 | 0.806419 | 8.30E-50 | -1.69E-46 |
| MS.gene060572 | MS.gene48244 | 0.818744 | 1.67E-52 | -1.69E-46 |
| MS.gene060907 | MS.gene48244 | 0.802308 | 5.97E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48244.t1 | MTR_5g061300 | 41.729 | 266 | 117 | 3 | 163 | 427 | 49 | 277 | 1.22e-68 | 225 |
| MS.gene48244.t1 | MTR_6g043310 | 39.375 | 160 | 75 | 5 | 356 | 509 | 1 | 144 | 1.03e-23 | 97.8 |
| MS.gene48244.t1 | MTR_7g037380 | 64.634 | 82 | 22 | 1 | 428 | 509 | 1 | 75 | 2.89e-23 | 97.4 |
| MS.gene48244.t1 | MTR_2g077010 | 48.780 | 123 | 37 | 2 | 453 | 549 | 1 | 123 | 2.78e-21 | 90.5 |
| MS.gene48244.t1 | MTR_3g055517 | 31.905 | 210 | 92 | 6 | 390 | 566 | 7 | 198 | 1.79e-16 | 79.0 |
| MS.gene48244.t1 | MTR_6g088780 | 37.692 | 130 | 64 | 5 | 384 | 509 | 8 | 124 | 4.50e-15 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48244.t1 | AT1G40087 | 27.240 | 279 | 159 | 10 | 199 | 446 | 73 | 338 | 3.74e-19 | 90.1 |
| MS.gene48244.t1 | AT3G30200 | 26.296 | 270 | 177 | 8 | 195 | 446 | 193 | 458 | 7.62e-19 | 90.5 |
Find 105 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGCTCCCCTTCTTCATTTA+AGG | 0.093712 | 4.2:+77484266 | None:intergenic |
| CATTGATGATTTCAGGAAAT+TGG | 0.204677 | 4.2:-77483750 | MS.gene48244:intron |
| GTCCTCTTACTTACACTAAT+TGG | 0.212199 | 4.2:-77484170 | MS.gene48244:CDS |
| CATATATTCTCCTTCTTCTT+TGG | 0.215996 | 4.2:+77484138 | None:intergenic |
| TAGGAAATTAATGATTTATT+GGG | 0.227619 | 4.2:-77483861 | MS.gene48244:CDS |
| CCATGGCAGCGCACTCTTCC+AGG | 0.230720 | 4.2:+77483025 | None:intergenic |
| AAAACTTACAATTGTGTTAC+TGG | 0.234856 | 4.2:+77483204 | None:intergenic |
| GCCCATTATTGTGGTCATTT+GGG | 0.242734 | 4.2:+77482753 | None:intergenic |
| TTAGGAAATTAATGATTTAT+TGG | 0.243216 | 4.2:-77483862 | MS.gene48244:CDS |
| CCTTATGATAGCAAAGCTTA+TGG | 0.259101 | 4.2:+77483674 | None:intergenic |
| AGCCCATTATTGTGGTCATT+TGG | 0.275452 | 4.2:+77482752 | None:intergenic |
| TTGAAAAGAAGTAAAGAAAT+TGG | 0.277839 | 4.2:-77482980 | MS.gene48244:CDS |
| AGATACATTGTTCCTGAAAA+AGG | 0.278882 | 4.2:-77484022 | MS.gene48244:CDS |
| GGAAATTGCAAGTTCTTCTA+AGG | 0.286199 | 4.2:-77482838 | MS.gene48244:CDS |
| CAAAGAAGAAGGAGAATATA+TGG | 0.298681 | 4.2:-77484137 | MS.gene48244:CDS |
| ACCCCAAATGACCACAATAA+TGG | 0.333226 | 4.2:-77482755 | MS.gene48244:CDS |
| CAATTGTGTTACTGGTAACT+TGG | 0.347417 | 4.2:+77483212 | None:intergenic |
| CAAGATTTGATCGTAAATTC+TGG | 0.349141 | 4.2:-77483094 | MS.gene48244:CDS |
| TATCTTGGTCTGAATTGCTT+TGG | 0.356836 | 4.2:+77482804 | None:intergenic |
| AATTTCCTAAAGTCTGCTTC+TGG | 0.359358 | 4.2:+77483875 | None:intergenic |
| CCCCAAATGACCACAATAAT+GGG | 0.360164 | 4.2:-77482754 | MS.gene48244:CDS |
| CAAGAGGACCTTGTTGATCA+TGG | 0.361988 | 4.2:-77485133 | MS.gene48244:CDS |
| AACATACCTCATCATTATTT+AGG | 0.362058 | 4.2:+77482705 | None:intergenic |
| TTAAATTTATCTTACTTGAA+TGG | 0.384647 | 4.2:+77483829 | None:intergenic |
| CTTATGATAGCAAAGCTTAT+GGG | 0.385281 | 4.2:+77483675 | None:intergenic |
| AAGCAATTCAGACCAAGATA+TGG | 0.396175 | 4.2:-77482801 | MS.gene48244:CDS |
| CCATTGTTCATGCATGAGAA+TGG | 0.397100 | 4.2:+77485792 | None:intergenic |
| CGTAAATTCTGGTCAGTCTT+CGG | 0.402447 | 4.2:-77483083 | MS.gene48244:CDS |
| CCATAAGCTTTGCTATCATA+AGG | 0.406969 | 4.2:-77483674 | MS.gene48244:CDS |
| ACATACCAGAAGCAGACTTT+AGG | 0.407882 | 4.2:-77483880 | MS.gene48244:CDS |
| ATTAACTCTGAAAGTGATAA+TGG | 0.409576 | 4.2:-77485022 | MS.gene48244:CDS |
| TCAAAGATTGTTGTTTCCTC+AGG | 0.411003 | 4.2:+77485680 | None:intergenic |
| AAGTGACAAGATTCAAGAAA+TGG | 0.411534 | 4.2:-77482918 | MS.gene48244:CDS |
| CTTCCCAGTCATGAAAAGAT+TGG | 0.424153 | 4.2:+77482355 | None:intergenic |
| CATCAGACAATTGTTCTTCA+AGG | 0.426301 | 4.2:+77482502 | None:intergenic |
| TAATCATCAAGTGACATTGA+TGG | 0.431600 | 4.2:+77485085 | None:intergenic |
| TTTATCCTGTAGGTAAATCA+TGG | 0.432016 | 4.2:-77482525 | MS.gene48244:intron |
| TTTCTTTACCGAAGATAGTT+CGG | 0.446641 | 4.2:+77483050 | None:intergenic |
| TCTGCTTCTGGTATGTTGTC+TGG | 0.448187 | 4.2:+77483887 | None:intergenic |
| TTCCAATTAGTGTAAGTAAG+AGG | 0.461637 | 4.2:+77484168 | None:intergenic |
| GAAATCACCTTAAATGAAGA+AGG | 0.461651 | 4.2:-77484273 | MS.gene48244:CDS |
| CCCATTATTGTGGTCATTTG+GGG | 0.468524 | 4.2:+77482754 | None:intergenic |
| CCTGGAAGAGTGCGCTGCCA+TGG | 0.474546 | 4.2:-77483025 | MS.gene48244:CDS |
| GAAGCATTCCGAACTATCTT+CGG | 0.475610 | 4.2:-77483058 | MS.gene48244:CDS |
| AGCAATTCAGACCAAGATAT+GGG | 0.476590 | 4.2:-77482800 | MS.gene48244:CDS |
| TCATCTTCCAAGTCATCAAA+AGG | 0.480538 | 4.2:+77482453 | None:intergenic |
| TCATTTCCAAAGTCATCAAA+AGG | 0.481346 | 4.2:+77482417 | None:intergenic |
| CTCATCATTATTTAGGCCAT+GGG | 0.484311 | 4.2:+77482712 | None:intergenic |
| CCTCATCATTATTTAGGCCA+TGG | 0.484321 | 4.2:+77482711 | None:intergenic |
| CCTCAGGTCATGCATGAGAA+TGG | 0.488919 | 4.2:+77485696 | None:intergenic |
| GGAGGTAAAACATGAAAAGA+TGG | 0.490515 | 4.2:-77482897 | MS.gene48244:CDS |
| ATGCTATAATAAATGATGCT+TGG | 0.498342 | 4.2:-77483985 | MS.gene48244:CDS |
| GTAGCGGTGTTACCTTCCAT+TGG | 0.504918 | 4.2:+77484944 | None:intergenic |
| GTGGGCCGGTCTCAGTTCGT+TGG | 0.511416 | 4.2:-77485181 | MS.gene48244:CDS |
| TTTGAGCAGATCCTGCCACT+TGG | 0.512670 | 4.2:+77485641 | None:intergenic |
| AAAGAAGAAGGAGAATATAT+GGG | 0.517336 | 4.2:-77484136 | MS.gene48244:CDS |
| AAACAACAATCTTTGACAGC+TGG | 0.523878 | 4.2:-77485673 | MS.gene48244:CDS |
| ATTTCTTCTCTTTCAGCAAG+TGG | 0.528393 | 4.2:+77484291 | None:intergenic |
| AAAACTTCAGCTTGAGTAGG+AGG | 0.531759 | 4.2:+77483274 | None:intergenic |
| GAAACACGACAAAGTAAGAA+AGG | 0.532579 | 4.2:-77483247 | MS.gene48244:CDS |
| AAAGAGATGGCAGCAATGGA+GGG | 0.533542 | 4.2:-77482860 | MS.gene48244:CDS |
| CATAAGCTTTGCTATCATAA+GGG | 0.534866 | 4.2:-77483673 | MS.gene48244:CDS |
| AGTGATAATGGTGATGTTGA+GGG | 0.539299 | 4.2:-77485010 | MS.gene48244:CDS |
| AGAACAACATACCGACGACT+TGG | 0.539872 | 4.2:-77482394 | MS.gene48244:CDS |
| GGAAGTTCAAGCCAAGTGGC+AGG | 0.540366 | 4.2:-77485652 | MS.gene48244:CDS |
| AGGAAATTAATGATTTATTG+GGG | 0.540538 | 4.2:-77483860 | MS.gene48244:CDS |
| AGGAGGCTCACAATCATCCT+TGG | 0.544300 | 4.2:+77483291 | None:intergenic |
| GAAGGCTATACCAAAGAAGA+AGG | 0.545383 | 4.2:-77484148 | MS.gene48244:CDS |
| TAAAGAGATGGCAGCAATGG+AGG | 0.548073 | 4.2:-77482861 | MS.gene48244:CDS |
| GTCATCTTCTTCCAAGTCGT+CGG | 0.550197 | 4.2:+77482383 | None:intergenic |
| TAGTAAAGAGATGGCAGCAA+TGG | 0.550552 | 4.2:-77482864 | MS.gene48244:CDS |
| TCTTACTTACACTAATTGGA+AGG | 0.551758 | 4.2:-77484166 | MS.gene48244:CDS |
| TTAATCCAACGAACTGAGAC+CGG | 0.557213 | 4.2:+77485176 | None:intergenic |
| AACCTACCACTTGAAGTTGA+GGG | 0.558153 | 4.2:-77485049 | MS.gene48244:CDS |
| AATGAAGAAGGGGAGCCCAT+TGG | 0.560442 | 4.2:-77484261 | MS.gene48244:CDS |
| CTTCTGGTATGTTGTCTGGA+CGG | 0.561123 | 4.2:+77483891 | None:intergenic |
| AAATCACCTTAAATGAAGAA+GGG | 0.563337 | 4.2:-77484272 | MS.gene48244:CDS |
| TAACCTACCACTTGAAGTTG+AGG | 0.568282 | 4.2:-77485050 | MS.gene48244:CDS |
| ACTAATGATAATCCAATGGA+AGG | 0.569690 | 4.2:-77484956 | MS.gene48244:intron |
| AAGTGATAATGGTGATGTTG+AGG | 0.576279 | 4.2:-77485011 | MS.gene48244:CDS |
| GATATTAACTATGAAAATGA+TGG | 0.577315 | 4.2:-77484986 | MS.gene48244:CDS |
| CAGTTCTGCTCAATTTCAAG+AGG | 0.584026 | 4.2:-77485149 | MS.gene48244:CDS |
| AAGGTGTTGCAACTCTTCCA+TGG | 0.586760 | 4.2:+77483008 | None:intergenic |
| AATTCAGAAAACAACGATGA+GGG | 0.597970 | 4.2:-77485740 | MS.gene48244:CDS |
| ATATCACCCTCAACTTCAAG+TGG | 0.599635 | 4.2:+77485043 | None:intergenic |
| CCATTCTCATGCATGAACAA+TGG | 0.600031 | 4.2:-77485792 | MS.gene48244:CDS |
| AATCACCTTAAATGAAGAAG+GGG | 0.602115 | 4.2:-77484271 | MS.gene48244:CDS |
| TAATAAATGATGCTTGGAGA+CGG | 0.606235 | 4.2:-77483979 | MS.gene48244:CDS |
| GAAAACTAATGATAATCCAA+TGG | 0.606636 | 4.2:-77484960 | MS.gene48244:CDS |
| ATGAATGTAGCCCATTATTG+TGG | 0.611135 | 4.2:+77482744 | None:intergenic |
| TGACAAGATTCAAGAAATGG+AGG | 0.626506 | 4.2:-77482915 | MS.gene48244:CDS |
| GCAATTCAGACCAAGATATG+GGG | 0.632072 | 4.2:-77482799 | MS.gene48244:CDS |
| CATTCATCTACATCTGCCCA+TGG | 0.633478 | 4.2:-77482728 | MS.gene48244:CDS |
| TATGCTCGAGAATTCATGAT+CGG | 0.640321 | 4.2:-77484314 | MS.gene48244:CDS |
| CCATGGCCTAAATAATGATG+AGG | 0.641883 | 4.2:-77482711 | MS.gene48244:intron |
| CACCCTCAACTTCAAGTGGT+AGG | 0.642167 | 4.2:+77485047 | None:intergenic |
| AGCTGGAAGTTCAAGCCAAG+TGG | 0.642871 | 4.2:-77485656 | MS.gene48244:CDS |
| AGTATGACAACTTGCGCGAG+CGG | 0.648684 | 4.2:-77483922 | MS.gene48244:CDS |
| TGGAAGGTCCATGATCAACA+AGG | 0.654556 | 4.2:+77485125 | None:intergenic |
| CAATTCAGACCAAGATATGG+GGG | 0.664719 | 4.2:-77482798 | MS.gene48244:CDS |
| CCATTCTCATGCATGACCTG+AGG | 0.667212 | 4.2:-77485696 | MS.gene48244:CDS |
| AAATTCAGAAAACAACGATG+AGG | 0.669446 | 4.2:-77485741 | MS.gene48244:CDS |
| CTATGTGTAGCGTGCAACCA+AGG | 0.673476 | 4.2:-77483308 | MS.gene48244:intron |
| AAGAGATGGCAGCAATGGAG+GGG | 0.675148 | 4.2:-77482859 | MS.gene48244:CDS |
| TTGATCATGGACCTTCCAAG+AGG | 0.695593 | 4.2:-77485120 | MS.gene48244:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAATTATTCATCATTC+AGG | + | chr4.2:77484778-77484797 | None:intergenic | 15.0% |
| !! | ATTAAATTCTATTACAAGTT+TGG | - | chr4.2:77484540-77484559 | MS.gene48244:intron | 15.0% |
| !! | ATTTAATTATTCATCATTCA+GGG | + | chr4.2:77484777-77484796 | None:intergenic | 15.0% |
| !! | TAGGAAATTAATGATTTATT+GGG | - | chr4.2:77484291-77484310 | MS.gene48244:CDS | 15.0% |
| !! | TTAAATTTATCTTACTTGAA+TGG | + | chr4.2:77484326-77484345 | None:intergenic | 15.0% |
| !! | TTAGGAAATTAATGATTTAT+TGG | - | chr4.2:77484290-77484309 | MS.gene48244:CDS | 15.0% |
| !! | AGGAAATTAATGATTTATTG+GGG | - | chr4.2:77484292-77484311 | MS.gene48244:CDS | 20.0% |
| !! | GAAATAAATAGAATGAACAA+AGG | + | chr4.2:77483374-77483393 | None:intergenic | 20.0% |
| !! | GATATTAACTATGAAAATGA+TGG | - | chr4.2:77483166-77483185 | MS.gene48244:intron | 20.0% |
| !! | TTGAAAAGAAGTAAAGAAAT+TGG | - | chr4.2:77485172-77485191 | MS.gene48244:CDS | 20.0% |
| !!! | ATTCTTTCTGTTTTAGTTAT+TGG | - | chr4.2:77483424-77483443 | MS.gene48244:intron | 20.0% |
| !!! | CATATATAACTTGTTGATAT+TGG | - | chr4.2:77483767-77483786 | MS.gene48244:intron | 20.0% |
| !!! | TTTTCACTTGTTTTATGTTT+GGG | - | chr4.2:77482858-77482877 | MS.gene48244:CDS | 20.0% |
| !!! | TTTTTCACTTGTTTTATGTT+TGG | - | chr4.2:77482857-77482876 | MS.gene48244:CDS | 20.0% |
| ! | AAAACTTACAATTGTGTTAC+TGG | + | chr4.2:77484951-77484970 | None:intergenic | 25.0% |
| ! | AAAGAAGAAGGAGAATATAT+GGG | - | chr4.2:77484016-77484035 | MS.gene48244:CDS | 25.0% |
| ! | AAATATGAACACTTGTAGAA+TGG | - | chr4.2:77484644-77484663 | MS.gene48244:intron | 25.0% |
| ! | AAATCACCTTAAATGAAGAA+GGG | - | chr4.2:77483880-77483899 | MS.gene48244:CDS | 25.0% |
| ! | AACATACCTCATCATTATTT+AGG | + | chr4.2:77485450-77485469 | None:intergenic | 25.0% |
| ! | AATAAAGGACAAGTAATGAT+TGG | + | chr4.2:77482585-77482604 | None:intergenic | 25.0% |
| ! | ACATCAAAAAAAAGGAAAAG+AGG | - | chr4.2:77483807-77483826 | MS.gene48244:intron | 25.0% |
| ! | ATGCTATAATAAATGATGCT+TGG | - | chr4.2:77484167-77484186 | MS.gene48244:CDS | 25.0% |
| ! | GAAAAAACATAGTAAAGAGA+TGG | - | chr4.2:77485279-77485298 | MS.gene48244:intron | 25.0% |
| ! | GAAAACTAATGATAATCCAA+TGG | - | chr4.2:77483192-77483211 | MS.gene48244:intron | 25.0% |
| ! | GAAAGGAGCAAATATAATAA+AGG | + | chr4.2:77482600-77482619 | None:intergenic | 25.0% |
| ! | GATAGCATAAGAGATATATA+AGG | + | chr4.2:77483674-77483693 | None:intergenic | 25.0% |
| ! | TAGGAGAAACATCAAAAAAA+AGG | - | chr4.2:77483799-77483818 | MS.gene48244:intron | 25.0% |
| ! | TGTTGAAAAATCAAACTAGT+GGG | - | chr4.2:77482953-77482972 | MS.gene48244:CDS | 25.0% |
| ! | TTATTAGTAGCTAAAATACG+AGG | - | chr4.2:77485570-77485589 | MS.gene48244:intron | 25.0% |
| ! | TTCATTACCATAAGGAATAT+TGG | - | chr4.2:77485501-77485520 | MS.gene48244:intron | 25.0% |
| ! | TTCATTTGTACTTTCAGTTA+GGG | - | chr4.2:77483473-77483492 | MS.gene48244:intron | 25.0% |
| ! | TTGATATTGGAATGTATACT+AGG | - | chr4.2:77483780-77483799 | MS.gene48244:intron | 25.0% |
| ! | TTTCATTTGTACTTTCAGTT+AGG | - | chr4.2:77483472-77483491 | MS.gene48244:intron | 25.0% |
| !! | AATTTTTGCTTGGTTTAAAG+TGG | + | chr4.2:77482396-77482415 | None:intergenic | 25.0% |
| !! | ATTAACTCTGAAAGTGATAA+TGG | - | chr4.2:77483130-77483149 | MS.gene48244:intron | 25.0% |
| !! | TAAAAAAAAGCATGCTATTG+AGG | - | chr4.2:77485201-77485220 | MS.gene48244:intron | 25.0% |
| !! | TTGTTTTCTGAATTTTTGCT+TGG | + | chr4.2:77482406-77482425 | None:intergenic | 25.0% |
| !!! | TCTGAATTCAGCAATTTTTT+GGG | - | chr4.2:77483933-77483952 | MS.gene48244:CDS | 25.0% |
| !!! | TCTTAGTATTTTTATCCTGT+AGG | - | chr4.2:77485617-77485636 | MS.gene48244:CDS | 25.0% |
| !!! | TTCTGAATTCAGCAATTTTT+TGG | - | chr4.2:77483932-77483951 | MS.gene48244:CDS | 25.0% |
| !!! | TTTCACTTGTTTTATGTTTG+GGG | - | chr4.2:77482859-77482878 | MS.gene48244:CDS | 25.0% |
| !!! | TTTCTGTTTTAGTTATTGGT+TGG | - | chr4.2:77483428-77483447 | MS.gene48244:intron | 25.0% |
| AAATTCAGAAAACAACGATG+AGG | - | chr4.2:77482411-77482430 | MS.gene48244:CDS | 30.0% | |
| AACATAAAAAGCAAGATCAC+AGG | - | chr4.2:77482537-77482556 | MS.gene48244:intron | 30.0% | |
| AAGTGACAAGATTCAAGAAA+TGG | - | chr4.2:77485234-77485253 | MS.gene48244:intron | 30.0% | |
| AATCACCTTAAATGAAGAAG+GGG | - | chr4.2:77483881-77483900 | MS.gene48244:CDS | 30.0% | |
| AATTCAGAAAACAACGATGA+GGG | - | chr4.2:77482412-77482431 | MS.gene48244:CDS | 30.0% | |
| ACAGAAAGAATGAACAACAA+AGG | + | chr4.2:77483415-77483434 | None:intergenic | 30.0% | |
| ACCAACTGAATGATACAAAT+CGG | + | chr4.2:77483536-77483555 | None:intergenic | 30.0% | |
| ACTAATGATAATCCAATGGA+AGG | - | chr4.2:77483196-77483215 | MS.gene48244:intron | 30.0% | |
| AGATACATTGTTCCTGAAAA+AGG | - | chr4.2:77484130-77484149 | MS.gene48244:CDS | 30.0% | |
| ATAAAAACTTCAGCTTGAGT+AGG | + | chr4.2:77484884-77484903 | None:intergenic | 30.0% | |
| CAAAGAAGAAGGAGAATATA+TGG | - | chr4.2:77484015-77484034 | MS.gene48244:CDS | 30.0% | |
| CAAGATTTGATCGTAAATTC+TGG | - | chr4.2:77485058-77485077 | MS.gene48244:CDS | 30.0% | |
| CAGAAAGAATGAACAACAAA+GGG | + | chr4.2:77483414-77483433 | None:intergenic | 30.0% | |
| CATATATTCTCCTTCTTCTT+TGG | + | chr4.2:77484017-77484036 | None:intergenic | 30.0% | |
| CCATTATTGTTGCAACTATA+AGG | + | chr4.2:77485475-77485494 | None:intergenic | 30.0% | |
| CCTTATAGTTGCAACAATAA+TGG | - | chr4.2:77485472-77485491 | MS.gene48244:intron | 30.0% | |
| CTTATGATAGCAAAGCTTAT+GGG | + | chr4.2:77484480-77484499 | None:intergenic | 30.0% | |
| GAAACATAGTTAACTAGTAG+CGG | + | chr4.2:77483227-77483246 | None:intergenic | 30.0% | |
| GAAATCACCTTAAATGAAGA+AGG | - | chr4.2:77483879-77483898 | MS.gene48244:CDS | 30.0% | |
| GATTTAAGTGCCAATAATAC+TGG | + | chr4.2:77484733-77484752 | None:intergenic | 30.0% | |
| GCTAACTCAATATAGATAAG+AGG | + | chr4.2:77483514-77483533 | None:intergenic | 30.0% | |
| GTGATGATTTCTACTACTAT+TGG | - | chr4.2:77484807-77484826 | MS.gene48244:intron | 30.0% | |
| GTGTTGAAAAATCAAACTAG+TGG | - | chr4.2:77482952-77482971 | MS.gene48244:CDS | 30.0% | |
| TAATAAATGATGCTTGGAGA+CGG | - | chr4.2:77484173-77484192 | MS.gene48244:CDS | 30.0% | |
| TAATCATCAAGTGACATTGA+TGG | + | chr4.2:77483070-77483089 | None:intergenic | 30.0% | |
| TATTCAGAATCATCTGTGTA+CGG | - | chr4.2:77483582-77483601 | MS.gene48244:intron | 30.0% | |
| TCAGTTAGGGTTATATTGTT+AGG | - | chr4.2:77483486-77483505 | MS.gene48244:intron | 30.0% | |
| TCATTTCCAAAGTCATCAAA+AGG | + | chr4.2:77485738-77485757 | None:intergenic | 30.0% | |
| TCTTACTTACACTAATTGGA+AGG | - | chr4.2:77483986-77484005 | MS.gene48244:CDS | 30.0% | |
| TGTTAGTTAGTGCAACAAAA+TGG | + | chr4.2:77482755-77482774 | None:intergenic | 30.0% | |
| TTCCAATTAGTGTAAGTAAG+AGG | + | chr4.2:77483987-77484006 | None:intergenic | 30.0% | |
| TTTATCCTGTAGGTAAATCA+TGG | - | chr4.2:77485627-77485646 | MS.gene48244:CDS | 30.0% | |
| TTTCATAAAGTCCATTCAGT+GGG | + | chr4.2:77484626-77484645 | None:intergenic | 30.0% | |
| TTTCTTTACCGAAGATAGTT+CGG | + | chr4.2:77485105-77485124 | None:intergenic | 30.0% | |
| ! | CATAAGCTTTGCTATCATAA+GGG | - | chr4.2:77484479-77484498 | MS.gene48244:intron | 30.0% |
| ! | CATTGATGATTTCAGGAAAT+TGG | - | chr4.2:77484402-77484421 | MS.gene48244:intron | 30.0% |
| ! | TTCCTTATGGTAATGAATGT+AGG | + | chr4.2:77485498-77485517 | None:intergenic | 30.0% |
| ! | TTTTCATAAAGTCCATTCAG+TGG | + | chr4.2:77484627-77484646 | None:intergenic | 30.0% |
| !! | TCAGAAACTATCTTTTGAGT+TGG | + | chr4.2:77483918-77483937 | None:intergenic | 30.0% |
| !! | TTACTTCTTTTCAAGAGAGA+AGG | + | chr4.2:77485166-77485185 | None:intergenic | 30.0% |
| !!! | AATGTTTTAGCTCTCAATGA+GGG | + | chr4.2:77485530-77485549 | None:intergenic | 30.0% |
| !!! | CTTCTTTGTTTTGACTGTTT+TGG | - | chr4.2:77483345-77483364 | MS.gene48244:intron | 30.0% |
| !!! | TAATGTTTTAGCTCTCAATG+AGG | + | chr4.2:77485531-77485550 | None:intergenic | 30.0% |
| !!! | TTCACTTGTTTTATGTTTGG+GGG | - | chr4.2:77482860-77482879 | MS.gene48244:CDS | 30.0% |
| AAAAAAGTAGCAGCCAACAA+TGG | + | chr4.2:77482648-77482667 | None:intergenic | 35.0% | |
| AAACAACAATCTTTGACAGC+TGG | - | chr4.2:77482479-77482498 | MS.gene48244:CDS | 35.0% | |
| AAGCAATTCAGACCAAGATA+TGG | - | chr4.2:77485351-77485370 | MS.gene48244:intron | 35.0% | |
| AATTTCCTAAAGTCTGCTTC+TGG | + | chr4.2:77484280-77484299 | None:intergenic | 35.0% | |
| ACAAAAATGTAGACATCGAG+CGG | - | chr4.2:77484452-77484471 | MS.gene48244:intron | 35.0% | |
| AGCAATTCAGACCAAGATAT+GGG | - | chr4.2:77485352-77485371 | MS.gene48244:intron | 35.0% | |
| ATCTTCGGTAAAGAAAAACC+TGG | - | chr4.2:77485109-77485128 | MS.gene48244:CDS | 35.0% | |
| ATGAAGATTGCAGTGATGAA+AGG | + | chr4.2:77482617-77482636 | None:intergenic | 35.0% | |
| ATGAATGTAGCCCATTATTG+TGG | + | chr4.2:77485411-77485430 | None:intergenic | 35.0% | |
| ATTCAGAATCATCTGTGTAC+GGG | - | chr4.2:77483583-77483602 | MS.gene48244:intron | 35.0% | |
| ATTTCTTCTCTTTCAGCAAG+TGG | + | chr4.2:77483864-77483883 | None:intergenic | 35.0% | |
| CACAGATGACACATATGATA+TGG | - | chr4.2:77483278-77483297 | MS.gene48244:CDS | 35.0% | |
| CATATCATATGTGTCATCTG+TGG | + | chr4.2:77483280-77483299 | None:intergenic | 35.0% | |
| CATCAGACAATTGTTCTTCA+AGG | + | chr4.2:77485653-77485672 | None:intergenic | 35.0% | |
| CCTTATGATAGCAAAGCTTA+TGG | + | chr4.2:77484481-77484500 | None:intergenic | 35.0% | |
| CTCATCATTATTTAGGCCAT+GGG | + | chr4.2:77485443-77485462 | None:intergenic | 35.0% | |
| GAAACACGACAAAGTAAGAA+AGG | - | chr4.2:77484905-77484924 | MS.gene48244:intron | 35.0% | |
| GGAAATTGCAAGTTCTTCTA+AGG | - | chr4.2:77485314-77485333 | MS.gene48244:intron | 35.0% | |
| GGAGGTAAAACATGAAAAGA+TGG | - | chr4.2:77485255-77485274 | MS.gene48244:intron | 35.0% | |
| GTCCTCTTACTTACACTAAT+TGG | - | chr4.2:77483982-77484001 | MS.gene48244:CDS | 35.0% | |
| GTTAGTGCAACAAAATGGTT+AGG | + | chr4.2:77482750-77482769 | None:intergenic | 35.0% | |
| GTTGAGTACTATTACTACCA+TGG | - | chr4.2:77482671-77482690 | MS.gene48244:intron | 35.0% | |
| TAATGATTGGCAAAGCATGT+TGG | + | chr4.2:77482572-77482591 | None:intergenic | 35.0% | |
| TATCTTGGTCTGAATTGCTT+TGG | + | chr4.2:77485351-77485370 | None:intergenic | 35.0% | |
| TATGCTCGAGAATTCATGAT+CGG | - | chr4.2:77483838-77483857 | MS.gene48244:intron | 35.0% | |
| TCATCTTCCAAGTCATCAAA+AGG | + | chr4.2:77485702-77485721 | None:intergenic | 35.0% | |
| TGACAAGATTCAAGAAATGG+AGG | - | chr4.2:77485237-77485256 | MS.gene48244:intron | 35.0% | |
| TGCTATCATAAGGGAAAAAC+TGG | - | chr4.2:77484488-77484507 | MS.gene48244:intron | 35.0% | |
| ! | AAAAGTGTAGTCAAAGTCAC+AGG | + | chr4.2:77482709-77482728 | None:intergenic | 35.0% |
| ! | AAGACCAATCTTTTCATGAC+TGG | - | chr4.2:77485793-77485812 | MS.gene48244:CDS | 35.0% |
| ! | AGACCAATCTTTTCATGACT+GGG | - | chr4.2:77485794-77485813 | MS.gene48244:CDS | 35.0% |
| ! | ATGTTGGTGAAGAAATGGAT+GGG | - | chr4.2:77484701-77484720 | MS.gene48244:intron | 35.0% |
| ! | CAATTGTGTTACTGGTAACT+TGG | + | chr4.2:77484943-77484962 | None:intergenic | 35.0% |
| ! | CCATAAGCTTTGCTATCATA+AGG | - | chr4.2:77484478-77484497 | MS.gene48244:intron | 35.0% |
| ! | TGACTCTCATTGATGATTTC+AGG | - | chr4.2:77484395-77484414 | MS.gene48244:intron | 35.0% |
| ! | TTCTGATGTTGGTGAAGAAA+TGG | - | chr4.2:77484696-77484715 | MS.gene48244:intron | 35.0% |
| !! | AAGTGATAATGGTGATGTTG+AGG | - | chr4.2:77483141-77483160 | MS.gene48244:intron | 35.0% |
| !! | AGAACAACCTTTTGATGACT+TGG | - | chr4.2:77485692-77485711 | MS.gene48244:CDS | 35.0% |
| !! | AGTGATAATGGTGATGTTGA+GGG | - | chr4.2:77483142-77483161 | MS.gene48244:intron | 35.0% |
| !! | GTTATTGGTTGGCTTTATGT+TGG | - | chr4.2:77483439-77483458 | MS.gene48244:intron | 35.0% |
| !! | TCAAAGATTGTTGTTTCCTC+AGG | + | chr4.2:77482475-77482494 | None:intergenic | 35.0% |
| !!! | ATCTTTTGAGTTGGACCAAT+GGG | + | chr4.2:77483909-77483928 | None:intergenic | 35.0% |
| !!! | ATTTTTTGGGATCAGTAGCA+AGG | - | chr4.2:77483946-77483965 | MS.gene48244:CDS | 35.0% |
| !!! | CTTTGTTTTGACTGTTTTGG+TGG | - | chr4.2:77483348-77483367 | MS.gene48244:intron | 35.0% |
| !!! | TATCTTTTGAGTTGGACCAA+TGG | + | chr4.2:77483910-77483929 | None:intergenic | 35.0% |
| AAAACTTCAGCTTGAGTAGG+AGG | + | chr4.2:77484881-77484900 | None:intergenic | 40.0% | |
| AACCTACCACTTGAAGTTGA+GGG | - | chr4.2:77483103-77483122 | MS.gene48244:CDS | 40.0% | |
| ACATACCAGAAGCAGACTTT+AGG | - | chr4.2:77484272-77484291 | MS.gene48244:CDS | 40.0% | |
| ACCCCAAATGACCACAATAA+TGG | - | chr4.2:77485397-77485416 | MS.gene48244:intron | 40.0% | |
| ACTGCTCTGTATCAATCAGT+TGG | - | chr4.2:77483643-77483662 | MS.gene48244:intron | 40.0% | |
| AGCCCATTATTGTGGTCATT+TGG | + | chr4.2:77485403-77485422 | None:intergenic | 40.0% | |
| AGGGTGACCAATATTCCTTA+TGG | + | chr4.2:77485511-77485530 | None:intergenic | 40.0% | |
| ATATCACCCTCAACTTCAAG+TGG | + | chr4.2:77483112-77483131 | None:intergenic | 40.0% | |
| ATCATATGTGTCATCTGTGG+TGG | + | chr4.2:77483277-77483296 | None:intergenic | 40.0% | |
| CAAAAATGTAGACATCGAGC+GGG | - | chr4.2:77484453-77484472 | MS.gene48244:intron | 40.0% | |
| CAATTCAGACCAAGATATGG+GGG | - | chr4.2:77485354-77485373 | MS.gene48244:intron | 40.0% | |
| CACTGCAATCTTCATTTGTG+AGG | - | chr4.2:77482622-77482641 | MS.gene48244:intron | 40.0% | |
| CAGTTCTGCTCAATTTCAAG+AGG | - | chr4.2:77483003-77483022 | MS.gene48244:CDS | 40.0% | |
| CCATGGCCTAAATAATGATG+AGG | - | chr4.2:77485441-77485460 | MS.gene48244:intron | 40.0% | |
| CCATTCTCATGCATGAACAA+TGG | - | chr4.2:77482360-77482379 | MS.gene48244:CDS | 40.0% | |
| CCATTGTTCATGCATGAGAA+TGG | + | chr4.2:77482363-77482382 | None:intergenic | 40.0% | |
| CCCATTATTGTGGTCATTTG+GGG | + | chr4.2:77485401-77485420 | None:intergenic | 40.0% | |
| CCCCAAATGACCACAATAAT+GGG | - | chr4.2:77485398-77485417 | MS.gene48244:intron | 40.0% | |
| CCTCATCATTATTTAGGCCA+TGG | + | chr4.2:77485444-77485463 | None:intergenic | 40.0% | |
| CGTAAATTCTGGTCAGTCTT+CGG | - | chr4.2:77485069-77485088 | MS.gene48244:CDS | 40.0% | |
| CTTCCCAGTCATGAAAAGAT+TGG | + | chr4.2:77485800-77485819 | None:intergenic | 40.0% | |
| GAAGGCTATACCAAAGAAGA+AGG | - | chr4.2:77484004-77484023 | MS.gene48244:CDS | 40.0% | |
| GCAATTCAGACCAAGATATG+GGG | - | chr4.2:77485353-77485372 | MS.gene48244:intron | 40.0% | |
| GCCCATTATTGTGGTCATTT+GGG | + | chr4.2:77485402-77485421 | None:intergenic | 40.0% | |
| GGCCTACATTCATTACCATA+AGG | - | chr4.2:77485493-77485512 | MS.gene48244:intron | 40.0% | |
| TAACCTACCACTTGAAGTTG+AGG | - | chr4.2:77483102-77483121 | MS.gene48244:CDS | 40.0% | |
| TACTACCATGGTTCAAAACC+TGG | - | chr4.2:77482683-77482702 | MS.gene48244:intron | 40.0% | |
| TAGTAAAGAGATGGCAGCAA+TGG | - | chr4.2:77485288-77485307 | MS.gene48244:intron | 40.0% | |
| TGGGACTAAAATCCAAGCTT+CGG | + | chr4.2:77484607-77484626 | None:intergenic | 40.0% | |
| TGGGATGACTCCAGTATTAT+TGG | - | chr4.2:77484720-77484739 | MS.gene48244:intron | 40.0% | |
| TGTTCCTGAAAAAGGAGAGA+AGG | - | chr4.2:77484138-77484157 | MS.gene48244:CDS | 40.0% | |
| TTAATCCAACGAACTGAGAC+CGG | + | chr4.2:77482979-77482998 | None:intergenic | 40.0% | |
| TTCAGAATCATCTGTGTACG+GGG | - | chr4.2:77483584-77483603 | MS.gene48244:intron | 40.0% | |
| TTCATTTGTGAGGCCATTGT+TGG | - | chr4.2:77482632-77482651 | MS.gene48244:intron | 40.0% | |
| ! | AACTTCTTTTGCCTCTTGGA+AGG | + | chr4.2:77483046-77483065 | None:intergenic | 40.0% |
| ! | GAAAAATCAAACTAGTGGGC+CGG | - | chr4.2:77482957-77482976 | MS.gene48244:CDS | 40.0% |
| ! | GAAGCATTCCGAACTATCTT+CGG | - | chr4.2:77485094-77485113 | MS.gene48244:CDS | 40.0% |
| ! | GATGTTGGTGAAGAAATGGA+TGG | - | chr4.2:77484700-77484719 | MS.gene48244:intron | 40.0% |
| ! | TGGTAACTTCTTTTGCCTCT+TGG | + | chr4.2:77483050-77483069 | None:intergenic | 40.0% |
| !! | GAGCAACCTTTTGATGACTT+TGG | - | chr4.2:77485729-77485748 | MS.gene48244:CDS | 40.0% |
| !! | GCCGATTTGTATCATTCAGT+TGG | - | chr4.2:77483532-77483551 | MS.gene48244:intron | 40.0% |
| !! | TGGATTTTAGTCCCACTGAA+TGG | - | chr4.2:77484612-77484631 | MS.gene48244:intron | 40.0% |
| !!! | ACTACTGATTTTTTGCCACC+CGG | - | chr4.2:77484565-77484584 | MS.gene48244:intron | 40.0% |
| AAAAAGCAAGATCACAGGCC+AGG | - | chr4.2:77482542-77482561 | MS.gene48244:intron | 45.0% | |
| AAAGAGATGGCAGCAATGGA+GGG | - | chr4.2:77485292-77485311 | MS.gene48244:intron | 45.0% | |
| AGAACAACATACCGACGACT+TGG | - | chr4.2:77485758-77485777 | MS.gene48244:CDS | 45.0% | |
| AGACCAAGATATGGGGGATT+TGG | - | chr4.2:77485360-77485379 | MS.gene48244:intron | 45.0% | |
| ATATGTGTCATCTGTGGTGG+TGG | + | chr4.2:77483274-77483293 | None:intergenic | 45.0% | |
| CAAGAGGACCTTGTTGATCA+TGG | - | chr4.2:77483019-77483038 | MS.gene48244:CDS | 45.0% | |
| CAAGGCCATGATTTACCTAC+AGG | + | chr4.2:77485635-77485654 | None:intergenic | 45.0% | |
| CAGAATGTTCCCCTAGTAGT+TGG | + | chr4.2:77484681-77484700 | None:intergenic | 45.0% | |
| CATTCATCTACATCTGCCCA+TGG | - | chr4.2:77485424-77485443 | MS.gene48244:intron | 45.0% | |
| CTAGGGGAACATTCTGATGT+TGG | - | chr4.2:77484685-77484704 | MS.gene48244:intron | 45.0% | |
| CTTCTGGTATGTTGTCTGGA+CGG | + | chr4.2:77484264-77484283 | None:intergenic | 45.0% | |
| GCAAAGCATGTTGGAAAACC+TGG | + | chr4.2:77482563-77482582 | None:intergenic | 45.0% | |
| GCAGACACATCGTTTGTACA+TGG | + | chr4.2:77483712-77483731 | None:intergenic | 45.0% | |
| GTCATCTTCTTCCAAGTCGT+CGG | + | chr4.2:77485772-77485791 | None:intergenic | 45.0% | |
| TAAAGAGATGGCAGCAATGG+AGG | - | chr4.2:77485291-77485310 | MS.gene48244:intron | 45.0% | |
| TCTGCTTCTGGTATGTTGTC+TGG | + | chr4.2:77484268-77484287 | None:intergenic | 45.0% | |
| TGGAAGGTCCATGATCAACA+AGG | + | chr4.2:77483030-77483049 | None:intergenic | 45.0% | |
| TTGATCATGGACCTTCCAAG+AGG | - | chr4.2:77483032-77483051 | MS.gene48244:CDS | 45.0% | |
| ! | ACAGCCTTCTCTCCTTTTTC+AGG | + | chr4.2:77484145-77484164 | None:intergenic | 45.0% |
| !! | AAGGTGTTGCAACTCTTCCA+TGG | + | chr4.2:77485147-77485166 | None:intergenic | 45.0% |
| !!! | CTACTGATTTTTTGCCACCC+GGG | - | chr4.2:77484566-77484585 | MS.gene48244:intron | 45.0% |
| !!! | TACTGATTTTTTGCCACCCG+GGG | - | chr4.2:77484567-77484586 | MS.gene48244:intron | 45.0% |
| AACCACCAGCTCCAACTACT+AGG | - | chr4.2:77484667-77484686 | MS.gene48244:intron | 50.0% | |
| AAGAGATGGCAGCAATGGAG+GGG | - | chr4.2:77485293-77485312 | MS.gene48244:intron | 50.0% | |
| AATGAAGAAGGGGAGCCCAT+TGG | - | chr4.2:77483891-77483910 | MS.gene48244:CDS | 50.0% | |
| ACCACCAGCTCCAACTACTA+GGG | - | chr4.2:77484668-77484687 | MS.gene48244:intron | 50.0% | |
| AGCTGGAAGTTCAAGCCAAG+TGG | - | chr4.2:77482496-77482515 | MS.gene48244:CDS | 50.0% | |
| AGCTTCACAAGACCGAAGCT+TGG | - | chr4.2:77484592-77484611 | MS.gene48244:intron | 50.0% | |
| AGGAGGCTCACAATCATCCT+TGG | + | chr4.2:77484864-77484883 | None:intergenic | 50.0% | |
| AGTATGACAACTTGCGCGAG+CGG | - | chr4.2:77484230-77484249 | MS.gene48244:CDS | 50.0% | |
| ATTCAGGGCAAGCTTCACTG+AGG | + | chr4.2:77484762-77484781 | None:intergenic | 50.0% | |
| CACCCTCAACTTCAAGTGGT+AGG | + | chr4.2:77483108-77483127 | None:intergenic | 50.0% | |
| CCATTCTCATGCATGACCTG+AGG | - | chr4.2:77482456-77482475 | MS.gene48244:CDS | 50.0% | |
| CCTCAGGTCATGCATGAGAA+TGG | + | chr4.2:77482459-77482478 | None:intergenic | 50.0% | |
| CTATGTGTAGCGTGCAACCA+AGG | - | chr4.2:77484844-77484863 | MS.gene48244:intron | 50.0% | |
| CTGCCAAATCCCCCATATCT+TGG | + | chr4.2:77485366-77485385 | None:intergenic | 50.0% | |
| GCAAGCTTCACTGAGGTTGT+TGG | + | chr4.2:77484755-77484774 | None:intergenic | 50.0% | |
| GGGCTCCCCTTCTTCATTTA+AGG | + | chr4.2:77483889-77483908 | None:intergenic | 50.0% | |
| TGTAGTCAAAGTCACAGGCC+AGG | + | chr4.2:77482704-77482723 | None:intergenic | 50.0% | |
| TTTGAGCAGATCCTGCCACT+TGG | + | chr4.2:77482514-77482533 | None:intergenic | 50.0% | |
| !! | GTAGCGGTGTTACCTTCCAT+TGG | + | chr4.2:77483211-77483230 | None:intergenic | 50.0% |
| !!! | ACAGGCCAGGTTTTGAACCA+TGG | + | chr4.2:77482691-77482710 | None:intergenic | 50.0% |
| CCACCAGCTCCAACTACTAG+GGG | - | chr4.2:77484669-77484688 | MS.gene48244:intron | 55.0% | |
| GGAAGTTCAAGCCAAGTGGC+AGG | - | chr4.2:77482500-77482519 | MS.gene48244:CDS | 55.0% | |
| GTTCCCCTAGTAGTTGGAGC+TGG | + | chr4.2:77484675-77484694 | None:intergenic | 55.0% | |
| CCCCTAGTAGTTGGAGCTGG+TGG | + | chr4.2:77484672-77484691 | None:intergenic | 60.0% | |
| ! | CGGTCTTGTGAAGCTTGCCC+CGG | + | chr4.2:77484587-77484606 | None:intergenic | 60.0% |
| ! | GGTCTTGTGAAGCTTGCCCC+GGG | + | chr4.2:77484586-77484605 | None:intergenic | 60.0% |
| CCATGGCAGCGCACTCTTCC+AGG | + | chr4.2:77485130-77485149 | None:intergenic | 65.0% | |
| CTTGTGAAGCTTGCCCCGGG+TGG | + | chr4.2:77484583-77484602 | None:intergenic | 65.0% | |
| GTGGGCCGGTCTCAGTTCGT+TGG | - | chr4.2:77482971-77482990 | MS.gene48244:CDS | 65.0% | |
| ! | CCTGGAAGAGTGCGCTGCCA+TGG | - | chr4.2:77485127-77485146 | MS.gene48244:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 77482332 | 77485842 | 77482332 | ID=MS.gene48244 |
| chr4.2 | mRNA | 77482332 | 77485842 | 77482332 | ID=MS.gene48244.t1;Parent=MS.gene48244 |
| chr4.2 | exon | 77485611 | 77485842 | 77485611 | ID=MS.gene48244.t1.exon1;Parent=MS.gene48244.t1 |
| chr4.2 | CDS | 77485611 | 77485842 | 77485611 | ID=cds.MS.gene48244.t1;Parent=MS.gene48244.t1 |
| chr4.2 | exon | 77484957 | 77485202 | 77484957 | ID=MS.gene48244.t1.exon2;Parent=MS.gene48244.t1 |
| chr4.2 | CDS | 77484957 | 77485202 | 77484957 | ID=cds.MS.gene48244.t1;Parent=MS.gene48244.t1 |
| chr4.2 | exon | 77484125 | 77484372 | 77484125 | ID=MS.gene48244.t1.exon3;Parent=MS.gene48244.t1 |
| chr4.2 | CDS | 77484125 | 77484372 | 77484125 | ID=cds.MS.gene48244.t1;Parent=MS.gene48244.t1 |
| chr4.2 | exon | 77483844 | 77484047 | 77483844 | ID=MS.gene48244.t1.exon4;Parent=MS.gene48244.t1 |
| chr4.2 | CDS | 77483844 | 77484047 | 77483844 | ID=cds.MS.gene48244.t1;Parent=MS.gene48244.t1 |
| chr4.2 | exon | 77483665 | 77483757 | 77483665 | ID=MS.gene48244.t1.exon5;Parent=MS.gene48244.t1 |
| chr4.2 | CDS | 77483665 | 77483757 | 77483665 | ID=cds.MS.gene48244.t1;Parent=MS.gene48244.t1 |
| chr4.2 | exon | 77483213 | 77483320 | 77483213 | ID=MS.gene48244.t1.exon6;Parent=MS.gene48244.t1 |
| chr4.2 | CDS | 77483213 | 77483320 | 77483213 | ID=cds.MS.gene48244.t1;Parent=MS.gene48244.t1 |
| chr4.2 | exon | 77482712 | 77483125 | 77482712 | ID=MS.gene48244.t1.exon7;Parent=MS.gene48244.t1 |
| chr4.2 | CDS | 77482712 | 77483125 | 77482712 | ID=cds.MS.gene48244.t1;Parent=MS.gene48244.t1 |
| chr4.2 | exon | 77482332 | 77482535 | 77482332 | ID=MS.gene48244.t1.exon8;Parent=MS.gene48244.t1 |
| chr4.2 | CDS | 77482332 | 77482535 | 77482332 | ID=cds.MS.gene48244.t1;Parent=MS.gene48244.t1 |
| Gene Sequence |
| Protein sequence |
