Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059220.t1 | XP_024638077.1 | 93.4 | 605 | 40 | 0 | 1 | 605 | 228 | 832 | 4.40E-250 | 874 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059220.t1 | A0A396I3C8 | 93.4 | 605 | 40 | 0 | 1 | 605 | 317 | 921 | 3.2e-250 | 874.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059220 | MS.gene06705 | 0.81244 | 4.23E-51 | -1.69E-46 |
| MS.gene059220 | MS.gene06921 | 0.807786 | 4.26E-50 | -1.69E-46 |
| MS.gene059220 | MS.gene06922 | 0.825409 | 4.76E-54 | -1.69E-46 |
| MS.gene059220 | MS.gene071796 | 0.806962 | 6.37E-50 | -1.69E-46 |
| MS.gene059220 | MS.gene072945 | 0.807389 | 5.18E-50 | -1.69E-46 |
| MS.gene059220 | MS.gene074527 | 0.803926 | 2.76E-49 | -1.69E-46 |
| MS.gene059220 | MS.gene25987 | 0.808092 | 3.67E-50 | -1.69E-46 |
| MS.gene059220 | MS.gene29380 | 0.807623 | 4.62E-50 | -1.69E-46 |
| MS.gene059220 | MS.gene31666 | 0.800453 | 1.43E-48 | -1.69E-46 |
| MS.gene059220 | MS.gene34085 | 0.805524 | 1.28E-49 | -1.69E-46 |
| MS.gene059220 | MS.gene45851 | 0.822811 | 1.94E-53 | -1.69E-46 |
| MS.gene059220 | MS.gene48244 | 0.820388 | 7.04E-53 | -1.69E-46 |
| MS.gene059220 | MS.gene48924 | 0.815283 | 1.00E-51 | -1.69E-46 |
| MS.gene059220 | MS.gene49003 | 0.806631 | 7.49E-50 | -1.69E-46 |
| MS.gene059220 | MS.gene54544 | 0.817548 | 3.12E-52 | -1.69E-46 |
| MS.gene059220 | MS.gene55111 | 0.816401 | 5.64E-52 | -1.69E-46 |
| MS.gene059220 | MS.gene56562 | 0.80702 | 6.20E-50 | -1.69E-46 |
| MS.gene059220 | MS.gene58468 | 0.800806 | 1.21E-48 | -1.69E-46 |
| MS.gene059220 | MS.gene67738 | 0.806224 | 9.12E-50 | -1.69E-46 |
| MS.gene059220 | MS.gene70651 | 0.807504 | 4.90E-50 | -1.69E-46 |
| MS.gene059220 | MS.gene78247 | 0.806734 | 7.12E-50 | -1.69E-46 |
| MS.gene059220 | MS.gene98848 | 0.80126 | 9.79E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059220.t1 | MTR_5g061300 | 40.909 | 264 | 118 | 3 | 245 | 507 | 51 | 277 | 1.32e-65 | 219 |
| MS.gene059220.t1 | MTR_7g037380 | 64.634 | 82 | 22 | 1 | 508 | 589 | 1 | 75 | 3.33e-23 | 97.4 |
| MS.gene059220.t1 | MTR_6g043310 | 38.750 | 160 | 76 | 5 | 436 | 589 | 1 | 144 | 5.43e-23 | 95.9 |
| MS.gene059220.t1 | MTR_2g077010 | 48.780 | 123 | 37 | 2 | 533 | 629 | 1 | 123 | 2.17e-21 | 90.9 |
| MS.gene059220.t1 | MTR_3g055517 | 31.905 | 210 | 92 | 6 | 470 | 646 | 7 | 198 | 2.08e-16 | 79.0 |
| MS.gene059220.t1 | MTR_6g088780 | 36.923 | 130 | 65 | 5 | 464 | 589 | 8 | 124 | 1.78e-14 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059220.t1 | AT1G40087 | 27.037 | 270 | 171 | 9 | 279 | 526 | 73 | 338 | 2.52e-19 | 91.3 |
| MS.gene059220.t1 | AT3G30200 | 26.667 | 270 | 176 | 8 | 275 | 526 | 193 | 458 | 3.12e-19 | 92.0 |
Find 115 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGCTCCCCTTCTTCATTTA+AGG | 0.093712 | 4.1:+73233812 | None:intergenic |
| AACATCCACTTTATACTTTC+TGG | 0.100460 | 4.1:+73235524 | None:intergenic |
| CATTGATGATTTCAGGAAAT+TGG | 0.113042 | 4.1:-73233296 | MS.gene059220:intron |
| GTCCTCTTACTTACACTAAT+TGG | 0.212199 | 4.1:-73233716 | MS.gene059220:CDS |
| CATATATTCTCCTTCTTCTT+TGG | 0.215996 | 4.1:+73233684 | None:intergenic |
| CCATGGCAGCGCACTCTTCC+AGG | 0.230720 | 4.1:+73232574 | None:intergenic |
| AAAACTTACAATTGTGTTAC+TGG | 0.234856 | 4.1:+73232755 | None:intergenic |
| GCCCATTATTGTGGTCATTT+GGG | 0.242734 | 4.1:+73232302 | None:intergenic |
| CCTTATGATAGCAAAGCTTA+TGG | 0.259101 | 4.1:+73233220 | None:intergenic |
| AGCCCATTATTGTGGTCATT+TGG | 0.275452 | 4.1:+73232301 | None:intergenic |
| TTGAAAAGAAGTAAAGAAAT+TGG | 0.277839 | 4.1:-73232529 | MS.gene059220:CDS |
| AGATACATTGTTCCTGAAAA+AGG | 0.278882 | 4.1:-73233568 | MS.gene059220:CDS |
| GGAAATTGCAAGTTCTTCTA+AGG | 0.286199 | 4.1:-73232387 | MS.gene059220:CDS |
| CAAAGAAGAAGGAGAATATA+TGG | 0.298681 | 4.1:-73233683 | MS.gene059220:CDS |
| ACCCCAAATGACCACAATAA+TGG | 0.333226 | 4.1:-73232304 | MS.gene059220:CDS |
| ACCTTCCATTGGATTGTCAT+TGG | 0.333646 | 4.1:+73234462 | None:intergenic |
| CAATTGTGTTACTGGTAACT+TGG | 0.347417 | 4.1:+73232763 | None:intergenic |
| CAAGATTTGATCGTAAATTC+TGG | 0.349141 | 4.1:-73232643 | MS.gene059220:CDS |
| TATCTTGGTCTGAATTGCTT+TGG | 0.356836 | 4.1:+73232353 | None:intergenic |
| AATTTCCTAAAGTCTGCTTC+TGG | 0.359358 | 4.1:+73233421 | None:intergenic |
| CCCCAAATGACCACAATAAT+GGG | 0.360164 | 4.1:-73232303 | MS.gene059220:CDS |
| CAAGAGGACCTTGTTGATCA+TGG | 0.361988 | 4.1:-73234643 | MS.gene059220:CDS |
| AACATACCTCATCATTATTT+AGG | 0.362058 | 4.1:+73232254 | None:intergenic |
| CTTATGATAGCAAAGCTTAT+GGG | 0.385281 | 4.1:+73233221 | None:intergenic |
| AAGCAATTCAGACCAAGATA+TGG | 0.396175 | 4.1:-73232350 | MS.gene059220:CDS |
| CGTAAATTCTGGTCAGTCTT+CGG | 0.402447 | 4.1:-73232632 | MS.gene059220:CDS |
| CCGTTGTTCATGCATGAGAA+TGG | 0.406746 | 4.1:+73235301 | None:intergenic |
| CCGTTGATCATGCTTGAGAA+TGG | 0.406746 | 4.1:+73235397 | None:intergenic |
| CCATAAGCTTTGCTATCATA+AGG | 0.406969 | 4.1:-73233220 | MS.gene059220:CDS |
| ACATACCAGAAGCAGACTTT+AGG | 0.407882 | 4.1:-73233426 | MS.gene059220:CDS |
| ATTAACTCTGAAAGTGATAA+TGG | 0.409576 | 4.1:-73234532 | MS.gene059220:CDS |
| TCAAAGATTGTTGTTTCCTC+AGG | 0.411003 | 4.1:+73235189 | None:intergenic |
| AAGTGACAAGATTCAAGAAA+TGG | 0.411534 | 4.1:-73232467 | MS.gene059220:CDS |
| ACTTACAGTTCTCCACTAGA+AGG | 0.419485 | 4.1:+73235717 | None:intergenic |
| CTTCCCAGTCATGAAAAGAT+TGG | 0.424153 | 4.1:+73231904 | None:intergenic |
| CATCAGACAATTGTTCTTCA+AGG | 0.426301 | 4.1:+73232051 | None:intergenic |
| TAATCATCAAGTGACATTGA+TGG | 0.431600 | 4.1:+73234595 | None:intergenic |
| TTTATCCTGTAGGTAAATCA+TGG | 0.432016 | 4.1:-73232074 | MS.gene059220:intron |
| TTTCTTTACCGAAGATAGTT+CGG | 0.446641 | 4.1:+73232599 | None:intergenic |
| TCTGCTTCTGGTATGTTGTC+TGG | 0.448187 | 4.1:+73233433 | None:intergenic |
| TTCCAATTAGTGTAAGTAAG+AGG | 0.461637 | 4.1:+73233714 | None:intergenic |
| GAAATCACCTTAAATGAAGA+AGG | 0.461651 | 4.1:-73233819 | MS.gene059220:CDS |
| CCCATTATTGTGGTCATTTG+GGG | 0.468524 | 4.1:+73232303 | None:intergenic |
| CCTGGAAGAGTGCGCTGCCA+TGG | 0.474546 | 4.1:-73232574 | MS.gene059220:CDS |
| GAAGCATTCCGAACTATCTT+CGG | 0.475610 | 4.1:-73232607 | MS.gene059220:CDS |
| AGCAATTCAGACCAAGATAT+GGG | 0.476590 | 4.1:-73232349 | MS.gene059220:CDS |
| TCATCTTCCAAGTCATCAAA+AGG | 0.480538 | 4.1:+73232002 | None:intergenic |
| TTGAGAATGGATCGATTAGC+GGG | 0.480707 | 4.1:+73235410 | None:intergenic |
| TCATTTCCAAAGTCATCAAA+AGG | 0.481346 | 4.1:+73231966 | None:intergenic |
| ATGCTATAATAAATGATGCT+TGG | 0.483767 | 4.1:-73233531 | MS.gene059220:CDS |
| CTCATCATTATTTAGGCCAT+GGG | 0.484311 | 4.1:+73232261 | None:intergenic |
| CCTCATCATTATTTAGGCCA+TGG | 0.484321 | 4.1:+73232260 | None:intergenic |
| CCTCAGGTCATGCATGAGAA+TGG | 0.488919 | 4.1:+73235205 | None:intergenic |
| GGAGGTAAAACATGAAAAGA+TGG | 0.490515 | 4.1:-73232446 | MS.gene059220:CDS |
| GTAGGGGTGTTACCTTCCAT+TGG | 0.499221 | 4.1:+73234451 | None:intergenic |
| GTGGGCCGGTCTCAGTTCGT+TGG | 0.511416 | 4.1:-73234691 | MS.gene059220:CDS |
| TTTGAGCAGATCCTGCCACT+TGG | 0.512670 | 4.1:+73235150 | None:intergenic |
| AAAGAAGAAGGAGAATATAT+GGG | 0.517336 | 4.1:-73233682 | MS.gene059220:CDS |
| AAACAACAATCTTTGACAGC+TGG | 0.523878 | 4.1:-73235182 | MS.gene059220:CDS |
| GTCGTCTTCTTCCAAGTCGT+CGG | 0.524961 | 4.1:+73231932 | None:intergenic |
| ATTTCTTCTCTTTCAGCAAG+TGG | 0.528393 | 4.1:+73233837 | None:intergenic |
| AAAACTTCAGCTTGAGTAGG+AGG | 0.531759 | 4.1:+73232825 | None:intergenic |
| GAAACACGACAAAGTAAGAA+AGG | 0.532579 | 4.1:-73232798 | MS.gene059220:CDS |
| AAAGAGATGGCAGCAATGGA+GGG | 0.533542 | 4.1:-73232409 | MS.gene059220:CDS |
| CATAAGCTTTGCTATCATAA+GGG | 0.534866 | 4.1:-73233219 | MS.gene059220:CDS |
| AGTGATAATGGTGATGTTGA+GGG | 0.539299 | 4.1:-73234520 | MS.gene059220:CDS |
| AGAACAACATACCGACGACT+TGG | 0.539872 | 4.1:-73231943 | MS.gene059220:CDS |
| GGAAGTTCAAGCCAAGTGGC+AGG | 0.540366 | 4.1:-73235161 | MS.gene059220:CDS |
| TTCTCCACTAGAAGGTTGCA+TGG | 0.540379 | 4.1:+73235725 | None:intergenic |
| AGGAGGCTCACAATCATCCT+TGG | 0.544300 | 4.1:+73232842 | None:intergenic |
| GAAGGCTATACCAAAGAAGA+AGG | 0.545383 | 4.1:-73233694 | MS.gene059220:CDS |
| TAAAGAGATGGCAGCAATGG+AGG | 0.548073 | 4.1:-73232410 | MS.gene059220:CDS |
| TAGTAAAGAGATGGCAGCAA+TGG | 0.550552 | 4.1:-73232413 | MS.gene059220:CDS |
| TCTTACTTACACTAATTGGA+AGG | 0.551758 | 4.1:-73233712 | MS.gene059220:CDS |
| AATTCAGAAAACAGCGATGA+GGG | 0.552902 | 4.1:-73235249 | MS.gene059220:CDS |
| TTAATCCAACGAACTGAGAC+CGG | 0.557213 | 4.1:+73234686 | None:intergenic |
| AACCTACCACTTGAAGTTGA+GGG | 0.558153 | 4.1:-73234559 | MS.gene059220:CDS |
| AACATAAAACGCAAGATCAC+AGG | 0.558519 | 4.1:-73235124 | MS.gene059220:CDS |
| AATGAAGAAGGGGAGCCCAT+TGG | 0.560442 | 4.1:-73233807 | MS.gene059220:CDS |
| CTTCTGGTATGTTGTCTGGA+CGG | 0.561123 | 4.1:+73233437 | None:intergenic |
| AAATCACCTTAAATGAAGAA+GGG | 0.563337 | 4.1:-73233818 | MS.gene059220:CDS |
| AAAACGCAAGATCACAGGCC+AGG | 0.563949 | 4.1:-73235119 | MS.gene059220:intron |
| TAACCTACCACTTGAAGTTG+AGG | 0.568282 | 4.1:-73234560 | MS.gene059220:CDS |
| CCGCCCATGCAACCTTCTAG+TGG | 0.573460 | 4.1:-73235729 | None:intergenic |
| AGTATGACAACTTGCGTGAG+CGG | 0.575926 | 4.1:-73233468 | MS.gene059220:CDS |
| AAGTGATAATGGTGATGTTG+AGG | 0.576279 | 4.1:-73234521 | MS.gene059220:CDS |
| CTTGAGAATGGATCGATTAG+CGG | 0.577318 | 4.1:+73235409 | None:intergenic |
| ACCAATGACAATCCAATGGA+AGG | 0.580607 | 4.1:-73234463 | MS.gene059220:intron |
| ATAAACTATGAAAATGATGA+TGG | 0.581271 | 4.1:-73234493 | MS.gene059220:CDS |
| ATATTCCAGAAAGTATAAAG+TGG | 0.583110 | 4.1:-73235529 | MS.gene059220:CDS |
| CAGTTCTGCTCAATTTCAAG+AGG | 0.584026 | 4.1:-73234659 | MS.gene059220:CDS |
| GAAAACCAATGACAATCCAA+TGG | 0.589221 | 4.1:-73234467 | MS.gene059220:CDS |
| ATATCACCCTCAACTTCAAG+TGG | 0.599635 | 4.1:+73234553 | None:intergenic |
| AATCACCTTAAATGAAGAAG+GGG | 0.602115 | 4.1:-73233817 | MS.gene059220:CDS |
| TAATAAATGATGCTTGGAGA+CGG | 0.606235 | 4.1:-73233525 | MS.gene059220:CDS |
| AAGGTGTTGTAACTCTTCCA+TGG | 0.608703 | 4.1:+73232557 | None:intergenic |
| ATGAATGTAGCCCATTATTG+TGG | 0.611135 | 4.1:+73232293 | None:intergenic |
| TGACAAGATTCAAGAAATGG+AGG | 0.626506 | 4.1:-73232464 | MS.gene059220:CDS |
| GCAATTCAGACCAAGATATG+GGG | 0.632072 | 4.1:-73232348 | MS.gene059220:CDS |
| CATTCATCTACATCTGCCCA+TGG | 0.633478 | 4.1:-73232277 | MS.gene059220:CDS |
| TATGCTCGAGAATTCATGAT+CGG | 0.640321 | 4.1:-73233860 | MS.gene059220:CDS |
| CCATGGCCTAAATAATGATG+AGG | 0.641883 | 4.1:-73232260 | MS.gene059220:intron |
| CACCCTCAACTTCAAGTGGT+AGG | 0.642167 | 4.1:+73234557 | None:intergenic |
| CCATTCTCAAGCATGATCAA+CGG | 0.642697 | 4.1:-73235397 | MS.gene059220:CDS |
| AGCTGGAAGTTCAAGCCAAG+TGG | 0.642871 | 4.1:-73235165 | MS.gene059220:CDS |
| TCTCCACTAGAAGGTTGCAT+GGG | 0.644391 | 4.1:+73235726 | None:intergenic |
| AAATTCAGAAAACAGCGATG+AGG | 0.652388 | 4.1:-73235250 | MS.gene059220:CDS |
| TGGAAGGTCCATGATCAACA+AGG | 0.654556 | 4.1:+73234635 | None:intergenic |
| CAATTCAGACCAAGATATGG+GGG | 0.664719 | 4.1:-73232347 | MS.gene059220:CDS |
| CCATTCTCATGCATGACCTG+AGG | 0.667212 | 4.1:-73235205 | MS.gene059220:CDS |
| CTATGTGTAGCGTGCAACCA+AGG | 0.673476 | 4.1:-73232859 | MS.gene059220:intron |
| AAGAGATGGCAGCAATGGAG+GGG | 0.675148 | 4.1:-73232408 | MS.gene059220:CDS |
| CCATTCTCATGCATGAACAA+CGG | 0.678870 | 4.1:-73235301 | MS.gene059220:CDS |
| TTGATCATGGACCTTCCAAG+AGG | 0.695593 | 4.1:-73234630 | MS.gene059220:CDS |
| TGAGAATGGATCGATTAGCG+GGG | 0.733161 | 4.1:+73235411 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATTCTATTACAAGTT+TGG | - | chr4.1:73234446-73234465 | MS.gene059220:intron | 15.0% |
| !! | TAAATAAATAGAATGAACAA+AGG | + | chr4.1:73233301-73233320 | None:intergenic | 15.0% |
| !!! | TAGGAAATTAATGTTTTATT+GGG | - | chr4.1:73234197-73234216 | MS.gene059220:intron | 15.0% |
| !!! | TTAGGAAATTAATGTTTTAT+TGG | - | chr4.1:73234196-73234215 | MS.gene059220:intron | 15.0% |
| !! | AATTTAATTATTCGTCATTC+AGG | + | chr4.1:73234679-73234698 | None:intergenic | 20.0% |
| !! | ATAAACTATGAAAATGATGA+TGG | - | chr4.1:73233111-73233130 | MS.gene059220:intron | 20.0% |
| !! | ATTTAATTATTCGTCATTCA+GGG | + | chr4.1:73234678-73234697 | None:intergenic | 20.0% |
| !! | TTGAAAAGAAGTAAAGAAAT+TGG | - | chr4.1:73235075-73235094 | MS.gene059220:intron | 20.0% |
| !!! | AGGAAATTAATGTTTTATTG+GGG | - | chr4.1:73234198-73234217 | MS.gene059220:intron | 20.0% |
| !!! | ATTCTTTCTGTTTAAGTTAT+TGG | - | chr4.1:73233349-73233368 | MS.gene059220:intron | 20.0% |
| !!! | CATATATAACTTGTTGATAT+TGG | - | chr4.1:73233667-73233686 | MS.gene059220:intron | 20.0% |
| !!! | TTATACTTTTCAATTGAGAA+AGG | - | chr4.1:73232045-73232064 | MS.gene059220:CDS | 20.0% |
| !!! | TTCACTTGTTTTATGTTTTA+GGG | - | chr4.1:73232802-73232821 | MS.gene059220:CDS | 20.0% |
| !!! | TTTCACTTGTTTTATGTTTT+AGG | - | chr4.1:73232801-73232820 | MS.gene059220:CDS | 20.0% |
| ! | AAAACTTACAATTGTGTTAC+TGG | + | chr4.1:73234852-73234871 | None:intergenic | 25.0% |
| ! | AAAGAAGAAGGAGAATATAT+GGG | - | chr4.1:73233922-73233941 | MS.gene059220:intron | 25.0% |
| ! | AAATATGAACACTTGTAGAA+TGG | - | chr4.1:73234550-73234569 | MS.gene059220:CDS | 25.0% |
| ! | AAATCACCTTAAATGAAGAA+GGG | - | chr4.1:73233786-73233805 | MS.gene059220:CDS | 25.0% |
| ! | AACATACCTCATCATTATTT+AGG | + | chr4.1:73235353-73235372 | None:intergenic | 25.0% |
| ! | AACCAAAAAATCAGAAAACA+AGG | - | chr4.1:73232156-73232175 | MS.gene059220:intron | 25.0% |
| ! | AATAAAGGACAAGTAATGAT+TGG | + | chr4.1:73232528-73232547 | None:intergenic | 25.0% |
| ! | ACATCAAAAAAAAGGAAAAG+AGG | - | chr4.1:73233707-73233726 | MS.gene059220:CDS | 25.0% |
| ! | ATGCTATAATAAATGATGCT+TGG | - | chr4.1:73234073-73234092 | MS.gene059220:intron | 25.0% |
| ! | GAAAAAACATAGTAAAGAGA+TGG | - | chr4.1:73235182-73235201 | MS.gene059220:CDS | 25.0% |
| ! | GAAAGGAGCAAATATAATAA+AGG | + | chr4.1:73232543-73232562 | None:intergenic | 25.0% |
| ! | GATAGCATAAGAGATATATA+AGG | + | chr4.1:73233574-73233593 | None:intergenic | 25.0% |
| ! | TAGGAGAAACATCAAAAAAA+AGG | - | chr4.1:73233699-73233718 | MS.gene059220:CDS | 25.0% |
| ! | TGTTGAAAAATCAAACTAGT+GGG | - | chr4.1:73232895-73232914 | MS.gene059220:intron | 25.0% |
| ! | TTATTAGTAGCTAAAATACG+AGG | - | chr4.1:73235473-73235492 | MS.gene059220:CDS | 25.0% |
| ! | TTCATTTGTACTTTCAGTTA+GGG | - | chr4.1:73233398-73233417 | MS.gene059220:CDS | 25.0% |
| ! | TTGATATTGGAATGTATACT+AGG | - | chr4.1:73233680-73233699 | MS.gene059220:CDS | 25.0% |
| ! | TTTCATTTGTACTTTCAGTT+AGG | - | chr4.1:73233397-73233416 | MS.gene059220:CDS | 25.0% |
| !! | AATTTTTGCTTGGTTTAAAG+TGG | + | chr4.1:73232339-73232358 | None:intergenic | 25.0% |
| !! | ATATTCCAGAAAGTATAAAG+TGG | - | chr4.1:73232075-73232094 | MS.gene059220:intron | 25.0% |
| !! | ATTAACTCTGAAAGTGATAA+TGG | - | chr4.1:73233072-73233091 | MS.gene059220:intron | 25.0% |
| !! | TAAAAAAAAGCATGCTATTG+AGG | - | chr4.1:73235104-73235123 | MS.gene059220:intron | 25.0% |
| !! | TGAGTTGAATTATCAAAAGA+AGG | - | chr4.1:73231955-73231974 | MS.gene059220:CDS | 25.0% |
| !! | TTTCTGTTTAAGTTATTGGT+TGG | - | chr4.1:73233353-73233372 | MS.gene059220:intron | 25.0% |
| !!! | ATAAAGTGGATGTTTTTGAA+AGG | - | chr4.1:73232089-73232108 | MS.gene059220:intron | 25.0% |
| !!! | ATCCTTGTTTTCTGATTTTT+TGG | + | chr4.1:73232161-73232180 | None:intergenic | 25.0% |
| !!! | GTTCAATTTCTTGTTGTTTA+AGG | - | chr4.1:73231908-73231927 | MS.gene059220:CDS | 25.0% |
| !!! | TCTGAATTCAGCAATTTTTT+GGG | - | chr4.1:73233839-73233858 | MS.gene059220:CDS | 25.0% |
| !!! | TCTTAGTATTTTTATCCTGT+AGG | - | chr4.1:73235520-73235539 | MS.gene059220:CDS | 25.0% |
| !!! | TTCTGAATTCAGCAATTTTT+TGG | - | chr4.1:73233838-73233857 | MS.gene059220:CDS | 25.0% |
| AAAAAAAGGAAAAGAGGAAG+AGG | - | chr4.1:73233713-73233732 | MS.gene059220:CDS | 30.0% | |
| AACATCCACTTTATACTTTC+TGG | + | chr4.1:73232083-73232102 | None:intergenic | 30.0% | |
| AACCAACTGAATGATACAAA+TGG | + | chr4.1:73233462-73233481 | None:intergenic | 30.0% | |
| AAGTGACAAGATTCAAGAAA+TGG | - | chr4.1:73235137-73235156 | MS.gene059220:CDS | 30.0% | |
| AATCACCTTAAATGAAGAAG+GGG | - | chr4.1:73233787-73233806 | MS.gene059220:CDS | 30.0% | |
| ACAGAAAGAATGAACAACAA+AGG | + | chr4.1:73233340-73233359 | None:intergenic | 30.0% | |
| ACCAACTGAATGATACAAAT+GGG | + | chr4.1:73233461-73233480 | None:intergenic | 30.0% | |
| AGATACATTGTTCCTGAAAA+AGG | - | chr4.1:73234036-73234055 | MS.gene059220:intron | 30.0% | |
| ATAAAAACTTCAGCTTGAGT+AGG | + | chr4.1:73234785-73234804 | None:intergenic | 30.0% | |
| ATGAAACATAGTTGAGTAGT+AGG | + | chr4.1:73233174-73233193 | None:intergenic | 30.0% | |
| CAAAAAAGTAGCAGATAACA+TGG | + | chr4.1:73232591-73232610 | None:intergenic | 30.0% | |
| CAAAGAAGAAGGAGAATATA+TGG | - | chr4.1:73233921-73233940 | MS.gene059220:intron | 30.0% | |
| CAAGATTTGATCGTAAATTC+TGG | - | chr4.1:73234961-73234980 | MS.gene059220:intron | 30.0% | |
| CAGAAAGAATGAACAACAAA+GGG | + | chr4.1:73233339-73233358 | None:intergenic | 30.0% | |
| CATATATTCTCCTTCTTCTT+TGG | + | chr4.1:73233923-73233942 | None:intergenic | 30.0% | |
| CCATTATTGTTGCAACTATA+AGG | + | chr4.1:73235378-73235397 | None:intergenic | 30.0% | |
| CCTTATAGTTGCAACAATAA+TGG | - | chr4.1:73235375-73235394 | MS.gene059220:CDS | 30.0% | |
| CTTATGATAGCAAAGCTTAT+GGG | + | chr4.1:73234386-73234405 | None:intergenic | 30.0% | |
| GAAATCACCTTAAATGAAGA+AGG | - | chr4.1:73233785-73233804 | MS.gene059220:CDS | 30.0% | |
| GATTTAAGTGCCAATAATAC+TGG | + | chr4.1:73234634-73234653 | None:intergenic | 30.0% | |
| GTGATGATTTCTACTACTAT+TGG | - | chr4.1:73234708-73234727 | MS.gene059220:intron | 30.0% | |
| GTGTTGAAAAATCAAACTAG+TGG | - | chr4.1:73232894-73232913 | MS.gene059220:intron | 30.0% | |
| TAATAAATGATGCTTGGAGA+CGG | - | chr4.1:73234079-73234098 | MS.gene059220:intron | 30.0% | |
| TAATCATCAAGTGACATTGA+TGG | + | chr4.1:73233012-73233031 | None:intergenic | 30.0% | |
| TCATTTCCAAAGTCATCAAA+AGG | + | chr4.1:73235641-73235660 | None:intergenic | 30.0% | |
| TCTTACTTACACTAATTGGA+AGG | - | chr4.1:73233892-73233911 | MS.gene059220:CDS | 30.0% | |
| TGAAACATAGTTGAGTAGTA+GGG | + | chr4.1:73233173-73233192 | None:intergenic | 30.0% | |
| TGTTAGTTAGTGCAACAAAA+TGG | + | chr4.1:73232697-73232716 | None:intergenic | 30.0% | |
| TTCAGTACCATAAGGAATAT+TGG | - | chr4.1:73235404-73235423 | MS.gene059220:CDS | 30.0% | |
| TTCCAATTAGTGTAAGTAAG+AGG | + | chr4.1:73233893-73233912 | None:intergenic | 30.0% | |
| TTTATCCTGTAGGTAAATCA+TGG | - | chr4.1:73235530-73235549 | MS.gene059220:CDS | 30.0% | |
| TTTCATAAAGTCCATTCAGT+GGG | + | chr4.1:73234532-73234551 | None:intergenic | 30.0% | |
| TTTCTTTACCGAAGATAGTT+CGG | + | chr4.1:73235008-73235027 | None:intergenic | 30.0% | |
| ! | CATAAGCTTTGCTATCATAA+GGG | - | chr4.1:73234385-73234404 | MS.gene059220:intron | 30.0% |
| ! | CATTGATGATTTCAGGAAAT+TGG | - | chr4.1:73234308-73234327 | MS.gene059220:intron | 30.0% |
| ! | CTGTTTTCTGAATTTTTGCT+TGG | + | chr4.1:73232349-73232368 | None:intergenic | 30.0% |
| ! | TTTTCATAAAGTCCATTCAG+TGG | + | chr4.1:73234533-73234552 | None:intergenic | 30.0% |
| ! | TTTTTCTGCTATCAATCAGT+TGG | - | chr4.1:73233543-73233562 | MS.gene059220:CDS | 30.0% |
| !! | TCAGAAACTATCTTTTGAGT+TGG | + | chr4.1:73233824-73233843 | None:intergenic | 30.0% |
| !! | TTACTTCTTTTCAAGAGAGA+AGG | + | chr4.1:73235069-73235088 | None:intergenic | 30.0% |
| !!! | AAAGGATCTTTTTCAAAGCA+AGG | - | chr4.1:73232107-73232126 | MS.gene059220:intron | 30.0% |
| !!! | AAGGATCTTTTTCAAAGCAA+GGG | - | chr4.1:73232108-73232127 | MS.gene059220:intron | 30.0% |
| !!! | AATGTTTTAGCTCTCAATGA+GGG | + | chr4.1:73235433-73235452 | None:intergenic | 30.0% |
| !!! | ATTTTTTGGTTGCTTTGAAG+TGG | + | chr4.1:73232147-73232166 | None:intergenic | 30.0% |
| !!! | TAATGTTTTAGCTCTCAATG+AGG | + | chr4.1:73235434-73235453 | None:intergenic | 30.0% |
| AAACAACAATCTTTGACAGC+TGG | - | chr4.1:73232422-73232441 | MS.gene059220:CDS | 35.0% | |
| AAATTCAGAAAACAGCGATG+AGG | - | chr4.1:73232354-73232373 | MS.gene059220:CDS | 35.0% | |
| AACATAAAACGCAAGATCAC+AGG | - | chr4.1:73232480-73232499 | MS.gene059220:CDS | 35.0% | |
| AAGCAATTCAGACCAAGATA+TGG | - | chr4.1:73235254-73235273 | MS.gene059220:CDS | 35.0% | |
| AATTCAGAAAACAGCGATGA+GGG | - | chr4.1:73232355-73232374 | MS.gene059220:CDS | 35.0% | |
| AATTTCCTAAAGTCTGCTTC+TGG | + | chr4.1:73234186-73234205 | None:intergenic | 35.0% | |
| ACAAAAATGTAGACATCGAG+CGG | - | chr4.1:73234358-73234377 | MS.gene059220:intron | 35.0% | |
| AGCAATTCAGACCAAGATAT+GGG | - | chr4.1:73235255-73235274 | MS.gene059220:CDS | 35.0% | |
| AGCATCATATGTGTCATATG+TGG | + | chr4.1:73233225-73233244 | None:intergenic | 35.0% | |
| ATCATATGTGTCATATGTGG+TGG | + | chr4.1:73233222-73233241 | None:intergenic | 35.0% | |
| ATCTTCGGTAAAGAAAAACC+TGG | - | chr4.1:73235012-73235031 | MS.gene059220:intron | 35.0% | |
| ATGAAGATTGCAGTGATGAA+AGG | + | chr4.1:73232560-73232579 | None:intergenic | 35.0% | |
| ATGAATGTAGCCCATTATTG+TGG | + | chr4.1:73235314-73235333 | None:intergenic | 35.0% | |
| ATGGATGACTCCAGTATTAT+TGG | - | chr4.1:73234621-73234640 | MS.gene059220:CDS | 35.0% | |
| ATTTCTTCTCTTTCAGCAAG+TGG | + | chr4.1:73233770-73233789 | None:intergenic | 35.0% | |
| CATCAGACAATTGTTCTTCA+AGG | + | chr4.1:73235556-73235575 | None:intergenic | 35.0% | |
| CCTTATGATAGCAAAGCTTA+TGG | + | chr4.1:73234387-73234406 | None:intergenic | 35.0% | |
| CTCATCATTATTTAGGCCAT+GGG | + | chr4.1:73235346-73235365 | None:intergenic | 35.0% | |
| GAAAACCAATGACAATCCAA+TGG | - | chr4.1:73233137-73233156 | MS.gene059220:intron | 35.0% | |
| GAAACACGACAAAGTAAGAA+AGG | - | chr4.1:73234806-73234825 | MS.gene059220:intron | 35.0% | |
| GAAACATAGTTGAGTAGTAG+GGG | + | chr4.1:73233172-73233191 | None:intergenic | 35.0% | |
| GCTACCTCAATATAGATAAG+AGG | + | chr4.1:73233439-73233458 | None:intergenic | 35.0% | |
| GGAAATTGCAAGTTCTTCTA+AGG | - | chr4.1:73235217-73235236 | MS.gene059220:CDS | 35.0% | |
| GGAGGTAAAACATGAAAAGA+TGG | - | chr4.1:73235158-73235177 | MS.gene059220:CDS | 35.0% | |
| GGTTCCTCTTATCTATATTG+AGG | - | chr4.1:73233432-73233451 | MS.gene059220:CDS | 35.0% | |
| GTCCTCTTACTTACACTAAT+TGG | - | chr4.1:73233888-73233907 | MS.gene059220:CDS | 35.0% | |
| GTTAGTGCAACAAAATGGTT+AGG | + | chr4.1:73232692-73232711 | None:intergenic | 35.0% | |
| GTTGAGTACTATTACTACCA+TGG | - | chr4.1:73232613-73232632 | MS.gene059220:CDS | 35.0% | |
| TAATGATTGGCAAAGCATGT+TGG | + | chr4.1:73232515-73232534 | None:intergenic | 35.0% | |
| TATCTTGGTCTGAATTGCTT+TGG | + | chr4.1:73235254-73235273 | None:intergenic | 35.0% | |
| TATGCTCGAGAATTCATGAT+CGG | - | chr4.1:73233744-73233763 | MS.gene059220:CDS | 35.0% | |
| TATTCAGAATCATCTGCGTA+CGG | - | chr4.1:73233507-73233526 | MS.gene059220:CDS | 35.0% | |
| TCATCTTCCAAGTCATCAAA+AGG | + | chr4.1:73235605-73235624 | None:intergenic | 35.0% | |
| TGACAAGATTCAAGAAATGG+AGG | - | chr4.1:73235140-73235159 | MS.gene059220:CDS | 35.0% | |
| TGATAATTCAACTCAGCCAA+TGG | + | chr4.1:73231950-73231969 | None:intergenic | 35.0% | |
| TGCTATCATAAGGGAAAAAC+TGG | - | chr4.1:73234394-73234413 | MS.gene059220:intron | 35.0% | |
| ! | AAGACCAATCTTTTCATGAC+TGG | - | chr4.1:73235696-73235715 | MS.gene059220:intron | 35.0% |
| ! | AGACCAATCTTTTCATGACT+GGG | - | chr4.1:73235697-73235716 | MS.gene059220:intron | 35.0% |
| ! | CAATTGTGTTACTGGTAACT+TGG | + | chr4.1:73234844-73234863 | None:intergenic | 35.0% |
| ! | CACCAAAGCATTCAAAAACA+AGG | + | chr4.1:73233277-73233296 | None:intergenic | 35.0% |
| ! | CCATAAGCTTTGCTATCATA+AGG | - | chr4.1:73234384-73234403 | MS.gene059220:intron | 35.0% |
| ! | TGACTCTCATTGATGATTTC+AGG | - | chr4.1:73234301-73234320 | MS.gene059220:intron | 35.0% |
| ! | TTCCTTATGGTACTGAATGT+AGG | + | chr4.1:73235401-73235420 | None:intergenic | 35.0% |
| ! | TTCTGATGTTGGTGAAGAAA+TGG | - | chr4.1:73234602-73234621 | MS.gene059220:CDS | 35.0% |
| !! | AAGTGATAATGGTGATGTTG+AGG | - | chr4.1:73233083-73233102 | MS.gene059220:intron | 35.0% |
| !! | AGAACAACCTTTTGATGACT+TGG | - | chr4.1:73235595-73235614 | MS.gene059220:intron | 35.0% |
| !! | AGTGATAATGGTGATGTTGA+GGG | - | chr4.1:73233084-73233103 | MS.gene059220:intron | 35.0% |
| !! | TCAAAGATTGTTGTTTCCTC+AGG | + | chr4.1:73232418-73232437 | None:intergenic | 35.0% |
| !!! | ATCTTTTGAGTTGGACCAAT+GGG | + | chr4.1:73233815-73233834 | None:intergenic | 35.0% |
| !!! | ATCTTTTTCAAAGCAAGGGA+TGG | - | chr4.1:73232112-73232131 | MS.gene059220:intron | 35.0% |
| !!! | ATTTTTTGGGATCAGTAGCA+AGG | - | chr4.1:73233852-73233871 | MS.gene059220:CDS | 35.0% |
| !!! | CTCCTTGTTTTTGAATGCTT+TGG | - | chr4.1:73233272-73233291 | MS.gene059220:CDS | 35.0% |
| !!! | CTTGTTTTTGAATGCTTTGG+TGG | - | chr4.1:73233275-73233294 | MS.gene059220:CDS | 35.0% |
| !!! | TATCTTTTGAGTTGGACCAA+TGG | + | chr4.1:73233816-73233835 | None:intergenic | 35.0% |
| AAAACTTCAGCTTGAGTAGG+AGG | + | chr4.1:73234782-73234801 | None:intergenic | 40.0% | |
| AACCTACCACTTGAAGTTGA+GGG | - | chr4.1:73233045-73233064 | MS.gene059220:intron | 40.0% | |
| ACATACCAGAAGCAGACTTT+AGG | - | chr4.1:73234178-73234197 | MS.gene059220:intron | 40.0% | |
| ACCAATGACAATCCAATGGA+AGG | - | chr4.1:73233141-73233160 | MS.gene059220:intron | 40.0% | |
| ACCCCAAATGACCACAATAA+TGG | - | chr4.1:73235300-73235319 | MS.gene059220:CDS | 40.0% | |
| ACCTTCCATTGGATTGTCAT+TGG | + | chr4.1:73233145-73233164 | None:intergenic | 40.0% | |
| ACTTACAGTTCTCCACTAGA+AGG | + | chr4.1:73231890-73231909 | None:intergenic | 40.0% | |
| AGCCCATTATTGTGGTCATT+TGG | + | chr4.1:73235306-73235325 | None:intergenic | 40.0% | |
| AGGGTGACCAATATTCCTTA+TGG | + | chr4.1:73235414-73235433 | None:intergenic | 40.0% | |
| ATATCACCCTCAACTTCAAG+TGG | + | chr4.1:73233054-73233073 | None:intergenic | 40.0% | |
| CAAAAATGTAGACATCGAGC+GGG | - | chr4.1:73234359-73234378 | MS.gene059220:intron | 40.0% | |
| CAATTCAGACCAAGATATGG+GGG | - | chr4.1:73235257-73235276 | MS.gene059220:CDS | 40.0% | |
| CACTGCAATCTTCATTTGTG+AGG | - | chr4.1:73232565-73232584 | MS.gene059220:CDS | 40.0% | |
| CAGTTCTGCTCAATTTCAAG+AGG | - | chr4.1:73232945-73232964 | MS.gene059220:intron | 40.0% | |
| CCATGGCCTAAATAATGATG+AGG | - | chr4.1:73235344-73235363 | MS.gene059220:CDS | 40.0% | |
| CCATTCTCAAGCATGATCAA+CGG | - | chr4.1:73232207-73232226 | MS.gene059220:intron | 40.0% | |
| CCATTCTCATGCATGAACAA+CGG | - | chr4.1:73232303-73232322 | MS.gene059220:CDS | 40.0% | |
| CCCATTATTGTGGTCATTTG+GGG | + | chr4.1:73235304-73235323 | None:intergenic | 40.0% | |
| CCCCAAATGACCACAATAAT+GGG | - | chr4.1:73235301-73235320 | MS.gene059220:CDS | 40.0% | |
| CCTCATCATTATTTAGGCCA+TGG | + | chr4.1:73235347-73235366 | None:intergenic | 40.0% | |
| CGTAAATTCTGGTCAGTCTT+CGG | - | chr4.1:73234972-73234991 | MS.gene059220:intron | 40.0% | |
| CTTCCCAGTCATGAAAAGAT+TGG | + | chr4.1:73235703-73235722 | None:intergenic | 40.0% | |
| CTTGAGAATGGATCGATTAG+CGG | + | chr4.1:73232198-73232217 | None:intergenic | 40.0% | |
| GAAGGCTATACCAAAGAAGA+AGG | - | chr4.1:73233910-73233929 | MS.gene059220:intron | 40.0% | |
| GATAAGAGGAACCCAACAAT+AGG | + | chr4.1:73233425-73233444 | None:intergenic | 40.0% | |
| GCAATTCAGACCAAGATATG+GGG | - | chr4.1:73235256-73235275 | MS.gene059220:CDS | 40.0% | |
| GCCCATTATTGTGGTCATTT+GGG | + | chr4.1:73235305-73235324 | None:intergenic | 40.0% | |
| GCCCATTTGTATCATTCAGT+TGG | - | chr4.1:73233457-73233476 | MS.gene059220:CDS | 40.0% | |
| TAACCTACCACTTGAAGTTG+AGG | - | chr4.1:73233044-73233063 | MS.gene059220:intron | 40.0% | |
| TACTACCATGGTTCAAAACC+TGG | - | chr4.1:73232625-73232644 | MS.gene059220:CDS | 40.0% | |
| TAGTAAAGAGATGGCAGCAA+TGG | - | chr4.1:73235191-73235210 | MS.gene059220:CDS | 40.0% | |
| TCAGTTAGGGTCCTATTGTT+GGG | - | chr4.1:73233411-73233430 | MS.gene059220:CDS | 40.0% | |
| TGGGACTAAAATCCAAGCTT+CGG | + | chr4.1:73234513-73234532 | None:intergenic | 40.0% | |
| TGTTCCTGAAAAAGGAGAGA+AGG | - | chr4.1:73234044-73234063 | MS.gene059220:intron | 40.0% | |
| TTAATCCAACGAACTGAGAC+CGG | + | chr4.1:73232921-73232940 | None:intergenic | 40.0% | |
| TTCAGTTAGGGTCCTATTGT+TGG | - | chr4.1:73233410-73233429 | MS.gene059220:CDS | 40.0% | |
| TTGAGAATGGATCGATTAGC+GGG | + | chr4.1:73232197-73232216 | None:intergenic | 40.0% | |
| ! | AACTTCTTTTGCCTCTTGGA+AGG | + | chr4.1:73232988-73233007 | None:intergenic | 40.0% |
| ! | ATGTGGTGGTGATGATGAAA+TGG | + | chr4.1:73233208-73233227 | None:intergenic | 40.0% |
| ! | CTTTTGTTACTACAGTGCTC+TGG | - | chr4.1:73233245-73233264 | MS.gene059220:CDS | 40.0% |
| ! | GAAAAATCAAACTAGTGGGC+CGG | - | chr4.1:73232899-73232918 | MS.gene059220:intron | 40.0% |
| ! | GAAGCATTCCGAACTATCTT+CGG | - | chr4.1:73234997-73235016 | MS.gene059220:intron | 40.0% |
| ! | TGGTAACTTCTTTTGCCTCT+TGG | + | chr4.1:73232992-73233011 | None:intergenic | 40.0% |
| !! | AAGGTGTTGTAACTCTTCCA+TGG | + | chr4.1:73235050-73235069 | None:intergenic | 40.0% |
| !! | GAGCAACCTTTTGATGACTT+TGG | - | chr4.1:73235632-73235651 | MS.gene059220:intron | 40.0% |
| !! | GTTATTGGTTGGCTTTCTGT+TGG | - | chr4.1:73233364-73233383 | MS.gene059220:intron | 40.0% |
| !! | TGGATTTTAGTCCCACTGAA+TGG | - | chr4.1:73234518-73234537 | MS.gene059220:CDS | 40.0% |
| !!! | ACTACTGATTTTTTGCCACC+CGG | - | chr4.1:73234471-73234490 | MS.gene059220:CDS | 40.0% |
| !!! | ATTTTTCGCTTGCTGTGAAG+TGG | + | chr4.1:73232243-73232262 | None:intergenic | 40.0% |
| AAAGAGATGGCAGCAATGGA+GGG | - | chr4.1:73235195-73235214 | MS.gene059220:CDS | 45.0% | |
| AATTCAACTCAGCCAATGGC+TGG | + | chr4.1:73231946-73231965 | None:intergenic | 45.0% | |
| AGAACAACATACCGACGACT+TGG | - | chr4.1:73235661-73235680 | MS.gene059220:intron | 45.0% | |
| AGACCAAGATATGGGGGATT+TGG | - | chr4.1:73235263-73235282 | MS.gene059220:CDS | 45.0% | |
| AGTATGACAACTTGCGTGAG+CGG | - | chr4.1:73234136-73234155 | MS.gene059220:intron | 45.0% | |
| CAAGAGGACCTTGTTGATCA+TGG | - | chr4.1:73232961-73232980 | MS.gene059220:intron | 45.0% | |
| CAAGGCCATGATTTACCTAC+AGG | + | chr4.1:73235538-73235557 | None:intergenic | 45.0% | |
| CAGAATGTTCCCCTAGTAGT+TGG | + | chr4.1:73234587-73234606 | None:intergenic | 45.0% | |
| CATTCATCTACATCTGCCCA+TGG | - | chr4.1:73235327-73235346 | MS.gene059220:CDS | 45.0% | |
| CCGTTGATCATGCTTGAGAA+TGG | + | chr4.1:73232210-73232229 | None:intergenic | 45.0% | |
| CCGTTGTTCATGCATGAGAA+TGG | + | chr4.1:73232306-73232325 | None:intergenic | 45.0% | |
| CTAGGGGAACATTCTGATGT+TGG | - | chr4.1:73234591-73234610 | MS.gene059220:CDS | 45.0% | |
| CTTCTGGTATGTTGTCTGGA+CGG | + | chr4.1:73234170-73234189 | None:intergenic | 45.0% | |
| GCAAAGCATGTTGGAAAACC+TGG | + | chr4.1:73232506-73232525 | None:intergenic | 45.0% | |
| GCAGACACATCGTTTGTACA+TGG | + | chr4.1:73233612-73233631 | None:intergenic | 45.0% | |
| GGCCTACATTCAGTACCATA+AGG | - | chr4.1:73235396-73235415 | MS.gene059220:CDS | 45.0% | |
| TAAAGAGATGGCAGCAATGG+AGG | - | chr4.1:73235194-73235213 | MS.gene059220:CDS | 45.0% | |
| TCTGCTTCTGGTATGTTGTC+TGG | + | chr4.1:73234174-73234193 | None:intergenic | 45.0% | |
| TGAGAATGGATCGATTAGCG+GGG | + | chr4.1:73232196-73232215 | None:intergenic | 45.0% | |
| TGGAAGGTCCATGATCAACA+AGG | + | chr4.1:73232972-73232991 | None:intergenic | 45.0% | |
| TGTAGTCAAAGTCACATGCC+AGG | + | chr4.1:73232646-73232665 | None:intergenic | 45.0% | |
| TTGATCATGGACCTTCCAAG+AGG | - | chr4.1:73232974-73232993 | MS.gene059220:intron | 45.0% | |
| ! | ACAGCCTTCTCTCCTTTTTC+AGG | + | chr4.1:73234051-73234070 | None:intergenic | 45.0% |
| !!! | ACATGCCAGGTTTTGAACCA+TGG | + | chr4.1:73232633-73232652 | None:intergenic | 45.0% |
| !!! | CTACTGATTTTTTGCCACCC+GGG | - | chr4.1:73234472-73234491 | MS.gene059220:CDS | 45.0% |
| !!! | TACTGATTTTTTGCCACCCG+GGG | - | chr4.1:73234473-73234492 | MS.gene059220:CDS | 45.0% |
| AAAACGCAAGATCACAGGCC+AGG | - | chr4.1:73232485-73232504 | MS.gene059220:CDS | 50.0% | |
| AACACTGTTGCTCCAGCCAT+TGG | - | chr4.1:73231931-73231950 | MS.gene059220:CDS | 50.0% | |
| AACCACCAGCTCCAACTACT+AGG | - | chr4.1:73234573-73234592 | MS.gene059220:CDS | 50.0% | |
| AAGAGATGGCAGCAATGGAG+GGG | - | chr4.1:73235196-73235215 | MS.gene059220:CDS | 50.0% | |
| AATGAAGAAGGGGAGCCCAT+TGG | - | chr4.1:73233797-73233816 | MS.gene059220:CDS | 50.0% | |
| ACCACCAGCTCCAACTACTA+GGG | - | chr4.1:73234574-73234593 | MS.gene059220:CDS | 50.0% | |
| AGCTGGAAGTTCAAGCCAAG+TGG | - | chr4.1:73232439-73232458 | MS.gene059220:CDS | 50.0% | |
| AGCTTCACAAGACCGAAGCT+TGG | - | chr4.1:73234498-73234517 | MS.gene059220:CDS | 50.0% | |
| AGGAGGCTCACAATCATCCT+TGG | + | chr4.1:73234765-73234784 | None:intergenic | 50.0% | |
| ATTCAGGGCAAGCTTCACTG+AGG | + | chr4.1:73234663-73234682 | None:intergenic | 50.0% | |
| CACCCTCAACTTCAAGTGGT+AGG | + | chr4.1:73233050-73233069 | None:intergenic | 50.0% | |
| CCATTCTCATGCATGACCTG+AGG | - | chr4.1:73232399-73232418 | MS.gene059220:CDS | 50.0% | |
| CCTCAGGTCATGCATGAGAA+TGG | + | chr4.1:73232402-73232421 | None:intergenic | 50.0% | |
| CTATGTGTAGCGTGCAACCA+AGG | - | chr4.1:73234745-73234764 | MS.gene059220:intron | 50.0% | |
| CTGCCAAATCCCCCATATCT+TGG | + | chr4.1:73235269-73235288 | None:intergenic | 50.0% | |
| GCAAGCTTCACTGAGGTTGT+TGG | + | chr4.1:73234656-73234675 | None:intergenic | 50.0% | |
| GGGCTCCCCTTCTTCATTTA+AGG | + | chr4.1:73233795-73233814 | None:intergenic | 50.0% | |
| GTCGTCTTCTTCCAAGTCGT+CGG | + | chr4.1:73235675-73235694 | None:intergenic | 50.0% | |
| TTTGAGCAGATCCTGCCACT+TGG | + | chr4.1:73232457-73232476 | None:intergenic | 50.0% | |
| !! | GTAGGGGTGTTACCTTCCAT+TGG | + | chr4.1:73233156-73233175 | None:intergenic | 50.0% |
| CCACCAGCTCCAACTACTAG+GGG | - | chr4.1:73234575-73234594 | MS.gene059220:CDS | 55.0% | |
| GGAAGTTCAAGCCAAGTGGC+AGG | - | chr4.1:73232443-73232462 | MS.gene059220:CDS | 55.0% | |
| GTTCCCCTAGTAGTTGGAGC+TGG | + | chr4.1:73234581-73234600 | None:intergenic | 55.0% | |
| CCCCTAGTAGTTGGAGCTGG+TGG | + | chr4.1:73234578-73234597 | None:intergenic | 60.0% | |
| ! | CGGTCTTGTGAAGCTTGCCC+CGG | + | chr4.1:73234493-73234512 | None:intergenic | 60.0% |
| ! | GGTCTTGTGAAGCTTGCCCC+GGG | + | chr4.1:73234492-73234511 | None:intergenic | 60.0% |
| CCATGGCAGCGCACTCTTCC+AGG | + | chr4.1:73235033-73235052 | None:intergenic | 65.0% | |
| CTTGTGAAGCTTGCCCCGGG+TGG | + | chr4.1:73234489-73234508 | None:intergenic | 65.0% | |
| GTGGGCCGGTCTCAGTTCGT+TGG | - | chr4.1:73232913-73232932 | MS.gene059220:intron | 65.0% | |
| ! | CCTGGAAGAGTGCGCTGCCA+TGG | - | chr4.1:73235030-73235049 | MS.gene059220:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 73231881 | 73235745 | 73231881 | ID=MS.gene059220 |
| chr4.1 | mRNA | 73231881 | 73235745 | 73231881 | ID=MS.gene059220.t1;Parent=MS.gene059220 |
| chr4.1 | exon | 73235723 | 73235745 | 73235723 | ID=MS.gene059220.t1.exon1;Parent=MS.gene059220.t1 |
| chr4.1 | CDS | 73235723 | 73235745 | 73235723 | ID=cds.MS.gene059220.t1;Parent=MS.gene059220.t1 |
| chr4.1 | exon | 73235120 | 73235559 | 73235120 | ID=MS.gene059220.t1.exon2;Parent=MS.gene059220.t1 |
| chr4.1 | CDS | 73235120 | 73235559 | 73235120 | ID=cds.MS.gene059220.t1;Parent=MS.gene059220.t1 |
| chr4.1 | exon | 73234464 | 73234712 | 73234464 | ID=MS.gene059220.t1.exon3;Parent=MS.gene059220.t1 |
| chr4.1 | CDS | 73234464 | 73234712 | 73234464 | ID=cds.MS.gene059220.t1;Parent=MS.gene059220.t1 |
| chr4.1 | exon | 73233671 | 73233924 | 73233671 | ID=MS.gene059220.t1.exon4;Parent=MS.gene059220.t1 |
| chr4.1 | CDS | 73233671 | 73233924 | 73233671 | ID=cds.MS.gene059220.t1;Parent=MS.gene059220.t1 |
| chr4.1 | exon | 73233390 | 73233593 | 73233390 | ID=MS.gene059220.t1.exon5;Parent=MS.gene059220.t1 |
| chr4.1 | CDS | 73233390 | 73233593 | 73233390 | ID=cds.MS.gene059220.t1;Parent=MS.gene059220.t1 |
| chr4.1 | exon | 73233211 | 73233303 | 73233211 | ID=MS.gene059220.t1.exon6;Parent=MS.gene059220.t1 |
| chr4.1 | CDS | 73233211 | 73233303 | 73233211 | ID=cds.MS.gene059220.t1;Parent=MS.gene059220.t1 |
| chr4.1 | exon | 73232764 | 73232871 | 73232764 | ID=MS.gene059220.t1.exon7;Parent=MS.gene059220.t1 |
| chr4.1 | CDS | 73232764 | 73232871 | 73232764 | ID=cds.MS.gene059220.t1;Parent=MS.gene059220.t1 |
| chr4.1 | exon | 73232261 | 73232674 | 73232261 | ID=MS.gene059220.t1.exon8;Parent=MS.gene059220.t1 |
| chr4.1 | CDS | 73232261 | 73232674 | 73232261 | ID=cds.MS.gene059220.t1;Parent=MS.gene059220.t1 |
| chr4.1 | exon | 73231881 | 73232084 | 73231881 | ID=MS.gene059220.t1.exon9;Parent=MS.gene059220.t1 |
| chr4.1 | CDS | 73231881 | 73232084 | 73231881 | ID=cds.MS.gene059220.t1;Parent=MS.gene059220.t1 |
| Gene Sequence |
| Protein sequence |
