Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49348.t1 | XP_013468580.1 | 92.2 | 553 | 43 | 0 | 1 | 553 | 1 | 553 | 1.10E-286 | 995.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49348.t1 | P27456 | 87.1 | 549 | 71 | 0 | 5 | 553 | 4 | 552 | 3.1e-274 | 945.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49348.t1 | A0A072VL94 | 92.2 | 553 | 43 | 0 | 1 | 553 | 1 | 553 | 7.9e-287 | 995.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049633 | MS.gene49348 | 0.833598 | 4.86E-56 | -1.69E-46 |
| MS.gene050165 | MS.gene49348 | 0.814976 | 1.17E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene49348 | 0.802455 | 5.56E-49 | -1.69E-46 |
| MS.gene051617 | MS.gene49348 | 0.80674 | 7.10E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene49348 | 0.800131 | 1.66E-48 | -1.69E-46 |
| MS.gene055748 | MS.gene49348 | 0.822074 | 2.88E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene49348 | 0.830801 | 2.39E-55 | -1.69E-46 |
| MS.gene056283 | MS.gene49348 | 0.839284 | 1.74E-57 | -1.69E-46 |
| MS.gene056549 | MS.gene49348 | 0.812968 | 3.25E-51 | -1.69E-46 |
| MS.gene057246 | MS.gene49348 | 0.821928 | 3.11E-53 | -1.69E-46 |
| MS.gene059079 | MS.gene49348 | 0.887509 | 1.34E-72 | -1.69E-46 |
| MS.gene060762 | MS.gene49348 | 0.836258 | 1.04E-56 | -1.69E-46 |
| MS.gene060982 | MS.gene49348 | 0.811953 | 5.41E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene74672 | MS.gene49348 | PPI |
| MS.gene49348 | MS.gene019928 | PPI |
| MS.gene49348 | MS.gene67036 | PPI |
| MS.gene49348 | MS.gene053443 | PPI |
| MS.gene53517 | MS.gene49348 | PPI |
| MS.gene49348 | MS.gene073888 | PPI |
| MS.gene49348 | MS.gene65554 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49348.t1 | MTR_1g070505 | 98.011 | 553 | 11 | 0 | 1 | 553 | 1 | 553 | 0.0 | 1112 |
| MS.gene49348.t1 | MTR_6g033515 | 53.878 | 477 | 213 | 5 | 66 | 536 | 16 | 491 | 0.0 | 518 |
| MS.gene49348.t1 | MTR_6g033515 | 52.449 | 490 | 212 | 7 | 66 | 536 | 16 | 503 | 1.03e-175 | 506 |
| MS.gene49348.t1 | MTR_4g121880 | 32.669 | 502 | 295 | 15 | 48 | 521 | 54 | 540 | 4.65e-49 | 179 |
| MS.gene49348.t1 | MTR_2g034580 | 31.707 | 492 | 292 | 15 | 58 | 521 | 68 | 543 | 2.28e-48 | 177 |
| MS.gene49348.t1 | MTR_2g034580 | 31.707 | 492 | 292 | 15 | 58 | 521 | 68 | 543 | 5.64e-48 | 176 |
| MS.gene49348.t1 | MTR_4g123070 | 28.176 | 433 | 291 | 9 | 104 | 521 | 59 | 486 | 7.48e-46 | 168 |
| MS.gene49348.t1 | MTR_0644s0030 | 28.529 | 333 | 223 | 9 | 116 | 438 | 336 | 663 | 2.00e-30 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49348.t1 | AT3G54660 | 82.129 | 498 | 88 | 1 | 55 | 552 | 68 | 564 | 0.0 | 873 |
| MS.gene49348.t1 | AT3G24170 | 53.404 | 470 | 212 | 4 | 70 | 533 | 21 | 489 | 2.64e-177 | 509 |
| MS.gene49348.t1 | AT3G24170 | 53.404 | 470 | 212 | 4 | 70 | 533 | 21 | 489 | 2.64e-177 | 509 |
| MS.gene49348.t1 | AT3G24170 | 53.404 | 470 | 212 | 4 | 70 | 533 | 21 | 489 | 2.64e-177 | 509 |
| MS.gene49348.t1 | AT3G16950 | 32.384 | 562 | 318 | 20 | 3 | 521 | 2 | 544 | 1.34e-50 | 183 |
| MS.gene49348.t1 | AT3G16950 | 32.384 | 562 | 318 | 20 | 3 | 521 | 2 | 544 | 3.47e-50 | 183 |
| MS.gene49348.t1 | AT4G16155 | 31.059 | 557 | 319 | 17 | 9 | 521 | 6 | 541 | 5.20e-48 | 176 |
| MS.gene49348.t1 | AT1G48030 | 26.559 | 433 | 298 | 8 | 104 | 521 | 64 | 491 | 1.71e-42 | 159 |
| MS.gene49348.t1 | AT1G48030 | 26.559 | 433 | 298 | 8 | 104 | 521 | 64 | 491 | 1.71e-42 | 159 |
| MS.gene49348.t1 | AT1G48030 | 26.559 | 433 | 298 | 8 | 104 | 521 | 64 | 491 | 1.71e-42 | 159 |
| MS.gene49348.t1 | AT1G48030 | 26.559 | 433 | 298 | 8 | 104 | 521 | 64 | 491 | 1.71e-42 | 159 |
| MS.gene49348.t1 | AT1G48030 | 26.559 | 433 | 298 | 8 | 104 | 521 | 64 | 491 | 1.71e-42 | 159 |
| MS.gene49348.t1 | AT3G17240 | 28.082 | 438 | 287 | 10 | 103 | 521 | 63 | 491 | 1.80e-41 | 156 |
| MS.gene49348.t1 | AT3G17240 | 28.082 | 438 | 287 | 10 | 103 | 521 | 63 | 491 | 1.80e-41 | 156 |
Find 149 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCGCTTTGCCTCCAATTT+TGG | 0.131189 | 1.1:+53101725 | MS.gene49348:CDS |
| CCACTGAAGGCCACCCTCTC+TGG | 0.136948 | 1.1:+53105930 | MS.gene49348:CDS |
| GAGTTTGCTGGTATCTTTAA+TGG | 0.157959 | 1.1:+53103749 | MS.gene49348:CDS |
| AAACATCGGTTCCTTCAATT+TGG | 0.171733 | 1.1:+53104876 | MS.gene49348:CDS |
| GGTGAAGAAGAGAGTGTTTC+GGG | 0.199422 | 1.1:-53101516 | None:intergenic |
| ACAATTTCACTGCAGAATTT+AGG | 0.226558 | 1.1:+53104709 | MS.gene49348:intron |
| AAACTTCATACCTTAGTATT+AGG | 0.232538 | 1.1:-53104088 | None:intergenic |
| GCTGAGTTGCAGAGGCTTAC+TGG | 0.274604 | 1.1:+53103368 | MS.gene49348:CDS |
| TTTGAAGAAAGCAATGGTTT+TGG | 0.285225 | 1.1:+53103287 | MS.gene49348:CDS |
| AGAGTGAAGGAACGAGAAAA+TGG | 0.288768 | 1.1:-53101548 | None:intergenic |
| TCTCACTCCAGTTGCTTTGA+TGG | 0.293228 | 1.1:+53104928 | MS.gene49348:CDS |
| TACATTGCCTTGGAGTTTGC+TGG | 0.310725 | 1.1:+53103737 | MS.gene49348:CDS |
| AGCAGCGTTAGCACCAAAAT+TGG | 0.316676 | 1.1:-53101738 | None:intergenic |
| TCTATTGCATATTCCTTTCC+AGG | 0.317991 | 1.1:-53103653 | None:intergenic |
| GGATTGAGAGATTAGGGTTT+TGG | 0.321278 | 1.1:-53101588 | None:intergenic |
| CCCTTCATTCCTGATATTCC+TGG | 0.322317 | 1.1:+53103635 | MS.gene49348:CDS |
| CCCTCTCTGGGCTTCCAGAC+CGG | 0.323993 | 1.1:+53105943 | MS.gene49348:CDS |
| GAGAGTGTTTCGGGTAAGTA+AGG | 0.332461 | 1.1:-53101507 | None:intergenic |
| TATTCCTTTCCAGGAATATC+AGG | 0.334157 | 1.1:-53103644 | None:intergenic |
| AGCGAAGGTGCGGCGGGGAG+GGG | 0.337776 | 1.1:-53101609 | None:intergenic |
| AACATCGGTTCCTTCAATTT+GGG | 0.350449 | 1.1:+53104877 | MS.gene49348:CDS |
| AGCCAACAAAACCTGATTAT+AGG | 0.353075 | 1.1:+53104987 | MS.gene49348:CDS |
| ACGAGAAAATGGGAAGGTTT+TGG | 0.361594 | 1.1:-53101537 | None:intergenic |
| CCTCTCTGGGCTTCCAGACC+GGG | 0.370019 | 1.1:+53105944 | MS.gene49348:CDS |
| GGGAGGGGATTGAGAGATTA+GGG | 0.370258 | 1.1:-53101594 | None:intergenic |
| CCAACAATGGCAATCTTCTC+AGG | 0.371658 | 1.1:-53103707 | None:intergenic |
| CACTGAAGGCCACCCTCTCT+GGG | 0.374084 | 1.1:+53105931 | MS.gene49348:CDS |
| AATGTATATTACCTATAATC+AGG | 0.374502 | 1.1:-53104998 | None:intergenic |
| AACTCCTCCAATTGGTGGTT+GGG | 0.383902 | 1.1:-53105736 | None:intergenic |
| ACAGCGAAGGTGCGGCGGGG+AGG | 0.385464 | 1.1:-53101611 | None:intergenic |
| GCATAGACGAGTAATTTCTT+TGG | 0.399267 | 1.1:-53103245 | None:intergenic |
| TACCAGCGCCGATGGTAAAA+AGG | 0.401258 | 1.1:-53101685 | None:intergenic |
| ACCATCCACGGTACCTTTGC+TGG | 0.403218 | 1.1:-53104032 | None:intergenic |
| AACTGAAACTAAAATGTGTT+TGG | 0.416281 | 1.1:-53103603 | None:intergenic |
| CAGCGAAGGTGCGGCGGGGA+GGG | 0.417528 | 1.1:-53101610 | None:intergenic |
| CTACAGGAGACTCCTCAGTA+TGG | 0.424734 | 1.1:-53103970 | None:intergenic |
| TGGTGAAGAAGAGAGTGTTT+CGG | 0.426258 | 1.1:-53101517 | None:intergenic |
| CCTCACACAGTTGATGTTGA+TGG | 0.426893 | 1.1:+53103566 | MS.gene49348:CDS |
| TTCTGGGTTTGCACATGTGT+GGG | 0.429264 | 1.1:+53106006 | MS.gene49348:CDS |
| TTTACCATCGGCGCTGGTAG+TGG | 0.429929 | 1.1:+53101689 | MS.gene49348:CDS |
| TCTAATGTCAAGTTGATTGA+AGG | 0.429954 | 1.1:+53103416 | MS.gene49348:CDS |
| CTTGATTTACCTGTGAATCA+AGG | 0.431951 | 1.1:-53106264 | None:intergenic |
| ACTCCCTCCATCAAAGCAAC+TGG | 0.439081 | 1.1:-53104935 | None:intergenic |
| GTTCCTTCAATTTGGGCAAT+CGG | 0.441096 | 1.1:+53104884 | MS.gene49348:CDS |
| GAGTGAAGGAACGAGAAAAT+GGG | 0.442493 | 1.1:-53101547 | None:intergenic |
| TTTGCAGTTGCTATTAAAGC+TGG | 0.444400 | 1.1:+53106142 | MS.gene49348:CDS |
| GCACAGGCTGTAGAACAATA+TGG | 0.445183 | 1.1:+53105876 | MS.gene49348:intron |
| TCTCATATTATGTTTGCTAC+AGG | 0.452576 | 1.1:+53104058 | MS.gene49348:CDS |
| ACAGTGAACCTAAGCATGAT+TGG | 0.455004 | 1.1:+53103321 | MS.gene49348:CDS |
| TGTATTTATACGACAAAAGC+AGG | 0.455244 | 1.1:+53103790 | MS.gene49348:CDS |
| CCTGAGAAGATTGCCATTGT+TGG | 0.456099 | 1.1:+53103707 | MS.gene49348:CDS |
| TCGAAAGAGCCTTGATTCAC+AGG | 0.456430 | 1.1:+53106255 | MS.gene49348:CDS |
| CGCGGACAGCGAAGGTGCGG+CGG | 0.457016 | 1.1:-53101616 | None:intergenic |
| GGGGAGGGGATTGAGAGATT+AGG | 0.458540 | 1.1:-53101595 | None:intergenic |
| TTACGTGCCGCCGACACCTC+CGG | 0.460902 | 1.1:-53101801 | None:intergenic |
| AGGACGCAAACCTAATACTA+AGG | 0.462907 | 1.1:+53104078 | MS.gene49348:CDS |
| GCGGACAGCGAAGGTGCGGC+GGG | 0.464036 | 1.1:-53101615 | None:intergenic |
| TAAGGGAGAAGAACAAGAAA+GGG | 0.476507 | 1.1:-53101489 | None:intergenic |
| TCTCCGATTGCCCAAATTGA+AGG | 0.476874 | 1.1:-53104887 | None:intergenic |
| GTAAGGGAGAAGAACAAGAA+AGG | 0.478482 | 1.1:-53101490 | None:intergenic |
| ACTCCAGTTGCTTTGATGGA+GGG | 0.482584 | 1.1:+53104932 | MS.gene49348:CDS |
| AGTTGGTCTCACAGAGGAGC+AGG | 0.483401 | 1.1:+53105755 | MS.gene49348:CDS |
| TCCAGGAATATCAGGAATGA+AGG | 0.485140 | 1.1:-53103636 | None:intergenic |
| GTGAGACCAACTCCTCCAAT+TGG | 0.485622 | 1.1:-53105744 | None:intergenic |
| AAACTACTCCAATCATGCTT+AGG | 0.489785 | 1.1:-53103329 | None:intergenic |
| ACAAACTCCTCAGCTGCGGT+TGG | 0.490186 | 1.1:-53106205 | None:intergenic |
| AGTTGCTTTGATGGAGGGAG+TGG | 0.491872 | 1.1:+53104937 | MS.gene49348:CDS |
| CAATCGGAGATGCTACAAAC+AGG | 0.496018 | 1.1:+53104900 | MS.gene49348:CDS |
| TCGAAGTCATAGTGGATGGC+GGG | 0.496947 | 1.1:-53101662 | None:intergenic |
| CAAACTCCTCAGCTGCGGTT+GGG | 0.497195 | 1.1:-53106204 | None:intergenic |
| CAACCACCAATTGGAGGAGT+TGG | 0.497734 | 1.1:+53105738 | MS.gene49348:CDS |
| GTGTTCTCCCAACCACCAAT+TGG | 0.499772 | 1.1:+53105729 | MS.gene49348:CDS |
| AAAGCAATATTGTTAAGTTC+CGG | 0.508995 | 1.1:-53106810 | None:intergenic |
| TTCACTGCAGAATTTAGGAC+TGG | 0.509056 | 1.1:+53104714 | MS.gene49348:intron |
| GGTTGGGAGAACACAGCAGC+AGG | 0.513851 | 1.1:-53105720 | None:intergenic |
| CTTCCTAGTGGGAGTCCTCA+TGG | 0.514013 | 1.1:-53106230 | None:intergenic |
| CACGAATTTGAAGAAAGCAA+TGG | 0.518983 | 1.1:+53103281 | MS.gene49348:CDS |
| CAACTCCTCCAATTGGTGGT+TGG | 0.519267 | 1.1:-53105737 | None:intergenic |
| CATTCCTGATATTCCTGGAA+AGG | 0.522049 | 1.1:+53103640 | MS.gene49348:CDS |
| CACTCCAGTTGCTTTGATGG+AGG | 0.522427 | 1.1:+53104931 | MS.gene49348:CDS |
| CGATTCAGCGCGGACAGCGA+AGG | 0.522983 | 1.1:-53101624 | None:intergenic |
| GTTCTGGGTTTGCACATGTG+TGG | 0.535374 | 1.1:+53106005 | MS.gene49348:CDS |
| GGTGGTATCCGATGAGATAG+TGG | 0.536762 | 1.1:-53101780 | None:intergenic |
| AGAAGATTGCCATTGTTGGT+GGG | 0.539271 | 1.1:+53103711 | MS.gene49348:CDS |
| AGAGTGTTTCGGGTAAGTAA+GGG | 0.540382 | 1.1:-53101506 | None:intergenic |
| CCAGAGAGGGTGGCCTTCAG+TGG | 0.541109 | 1.1:-53105930 | None:intergenic |
| TGATGCTCCTGAAATTGTGC+AGG | 0.541563 | 1.1:+53106031 | MS.gene49348:CDS |
| GCTGCCTTAGTGATAGCTAC+AGG | 0.541775 | 1.1:-53103986 | None:intergenic |
| GAGAAGATTGCCATTGTTGG+TGG | 0.542063 | 1.1:+53103710 | MS.gene49348:CDS |
| TGCTAAAGATGGATCAATAG+AGG | 0.542879 | 1.1:+53104756 | MS.gene49348:CDS |
| AATTTAGGACTGGAGTCTGT+TGG | 0.543197 | 1.1:+53104724 | MS.gene49348:CDS |
| GAAGATTGCCATTGTTGGTG+GGG | 0.543504 | 1.1:+53103712 | MS.gene49348:CDS |
| GTCAAGTTGATTGAAGGCCG+TGG | 0.546121 | 1.1:+53103422 | MS.gene49348:CDS |
| GTCTGGAAGCCCAGAGAGGG+TGG | 0.547984 | 1.1:-53105940 | None:intergenic |
| CTCACACAGTTGATGTTGAT+GGG | 0.555032 | 1.1:+53103567 | MS.gene49348:CDS |
| GAGAGAAGGTGAGAGAGTGA+AGG | 0.555852 | 1.1:-53101561 | None:intergenic |
| CTCTTTCGAATCTTCCTAGT+GGG | 0.556074 | 1.1:-53106241 | None:intergenic |
| ACCATCGGCGCTGGTAGTGG+TGG | 0.557046 | 1.1:+53101692 | MS.gene49348:CDS |
| TCGGATACCACCGGAGGTGT+CGG | 0.560790 | 1.1:+53101791 | MS.gene49348:CDS |
| CTCTCTTTAAAGACCAGCAA+AGG | 0.565512 | 1.1:+53104019 | MS.gene49348:CDS |
| ACCAGCAAAGGTACCGTGGA+TGG | 0.570642 | 1.1:+53104031 | MS.gene49348:CDS |
| ACTAATGAAGCAAGCAGCAA+TGG | 0.570686 | 1.1:+53101454 | None:intergenic |
| GTTGATTGAAGGCCGTGGAA+AGG | 0.572186 | 1.1:+53103427 | MS.gene49348:CDS |
| TCTGAAGCAAAAGCTGTAGC+CGG | 0.574037 | 1.1:+53106791 | MS.gene49348:CDS |
| AAGATTGCCATTGTTGGTGG+GGG | 0.574113 | 1.1:+53103713 | MS.gene49348:CDS |
| TCCGTTCTCCACTATCTCAT+CGG | 0.574933 | 1.1:+53101772 | MS.gene49348:CDS |
| AGCGTTAGCACCAAAATTGG+AGG | 0.575795 | 1.1:-53101735 | None:intergenic |
| GGTGTGAAGATTGCTAAAGA+TGG | 0.580574 | 1.1:+53104745 | MS.gene49348:CDS |
| ACCACCACTACCAGCGCCGA+TGG | 0.580753 | 1.1:-53101693 | None:intergenic |
| GTCCGCGCTGAATCGCAAAA+CGG | 0.581424 | 1.1:+53101632 | MS.gene49348:CDS |
| GCAGAAAATATGGCTCTAAG+AGG | 0.582671 | 1.1:+53103938 | MS.gene49348:CDS |
| CAGCGCGGACAGCGAAGGTG+CGG | 0.586569 | 1.1:-53101619 | None:intergenic |
| CCGGTCTGGAAGCCCAGAGA+GGG | 0.587282 | 1.1:-53105943 | None:intergenic |
| CATTCACCCAACCGCAGCTG+AGG | 0.593036 | 1.1:+53106198 | MS.gene49348:CDS |
| TTCTCCCAACCACCAATTGG+AGG | 0.598183 | 1.1:+53105732 | MS.gene49348:CDS |
| GCAGACTTTGATGCTACTGT+AGG | 0.605910 | 1.1:+53106175 | MS.gene49348:CDS |
| ACTATCTCATCGGATACCAC+CGG | 0.607136 | 1.1:+53101782 | MS.gene49348:CDS |
| GTCTCCTGTAGCTATCACTA+AGG | 0.610701 | 1.1:+53103982 | MS.gene49348:CDS |
| TCACCATGAGGACTCCCACT+AGG | 0.611633 | 1.1:+53106227 | MS.gene49348:CDS |
| TCTGGGTTTGCACATGTGTG+GGG | 0.615085 | 1.1:+53106007 | MS.gene49348:CDS |
| TTTGCGAGGATTTGATGAAG+AGG | 0.617316 | 1.1:+53103814 | MS.gene49348:CDS |
| AGAATCATCCCACCTTTCCA+CGG | 0.618295 | 1.1:-53103439 | None:intergenic |
| AAAGATACCAGCAAACTCCA+AGG | 0.619374 | 1.1:-53103744 | None:intergenic |
| TATTAAAGCTGGATTGACAA+AGG | 0.619694 | 1.1:+53106153 | MS.gene49348:CDS |
| CCAGGAATATCAGGAATGAA+GGG | 0.621948 | 1.1:-53103635 | None:intergenic |
| TCCGATGAGATAGTGGAGAA+CGG | 0.624800 | 1.1:-53101773 | None:intergenic |
| CGAAGTCATAGTGGATGGCG+GGG | 0.627610 | 1.1:-53101661 | None:intergenic |
| CCATCAACATCAACTGTGTG+AGG | 0.629501 | 1.1:-53103566 | None:intergenic |
| AAGGTCGAAGTCATAGTGGA+TGG | 0.632605 | 1.1:-53101666 | None:intergenic |
| GTCGAAGTCATAGTGGATGG+CGG | 0.633614 | 1.1:-53101663 | None:intergenic |
| TGATGAATACTCTCAAACAT+CGG | 0.635283 | 1.1:+53104862 | MS.gene49348:CDS |
| GCTATCACTAAGGCAGCTGA+TGG | 0.636893 | 1.1:+53103992 | MS.gene49348:CDS |
| TGGAGGCAAAGCGAGAGGCG+CGG | 0.637060 | 1.1:-53101718 | None:intergenic |
| AAAATTGGAGGCAAAGCGAG+AGG | 0.641131 | 1.1:-53101723 | None:intergenic |
| AGACCAACTCCTCCAATTGG+TGG | 0.641871 | 1.1:-53105741 | None:intergenic |
| CGGACAGCGAAGGTGCGGCG+GGG | 0.644049 | 1.1:-53101614 | None:intergenic |
| GATACCACCGGAGGTGTCGG+CGG | 0.653808 | 1.1:+53101794 | MS.gene49348:CDS |
| GAAGGAACGAGAAAATGGGA+AGG | 0.663016 | 1.1:-53101543 | None:intergenic |
| GGTGACAAACTCCTCAGCTG+CGG | 0.664472 | 1.1:-53106209 | None:intergenic |
| GCTCTTTCGAATCTTCCTAG+TGG | 0.665678 | 1.1:-53106242 | None:intergenic |
| CGTGCCGCCGACACCTCCGG+TGG | 0.685458 | 1.1:-53101798 | None:intergenic |
| AAAGACCAGCAAAGGTACCG+TGG | 0.688890 | 1.1:+53104027 | MS.gene49348:CDS |
| CTGAGGAGTTTGTCACCATG+AGG | 0.689480 | 1.1:+53106215 | MS.gene49348:CDS |
| CCCGGTCTGGAAGCCCAGAG+AGG | 0.691224 | 1.1:-53105944 | None:intergenic |
| AGGTATTGAATTCCATACTG+AGG | 0.697204 | 1.1:+53103958 | MS.gene49348:CDS |
| ATCTCATCGGATACCACCGG+AGG | 0.706409 | 1.1:+53101785 | MS.gene49348:CDS |
| AATATGAGAGAAACCATCCA+CGG | 0.716565 | 1.1:-53104044 | None:intergenic |
| TTGTGCAGCTGTGTAATACG+TGG | 0.758121 | 1.1:+53103215 | MS.gene49348:intron |
| TGGAGGAGTTGGTCTCACAG+AGG | 0.772688 | 1.1:+53105749 | MS.gene49348:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTTTTAATATATTCTA+GGG | + | chr1.1:53106758-53106777 | MS.gene49348:intron | 10.0% |
| !! | AAATGAATTAAGTATCATAT+TGG | - | chr1.1:53106557-53106576 | None:intergenic | 15.0% |
| !! | AATATGATACTTAATTCATT+TGG | + | chr1.1:53106556-53106575 | MS.gene49348:intron | 15.0% |
| !! | ATATGATACTTAATTCATTT+GGG | + | chr1.1:53106557-53106576 | MS.gene49348:intron | 15.0% |
| !! | TTTCCATATTTATCAAAATT+AGG | + | chr1.1:53104502-53104521 | MS.gene49348:intron | 15.0% |
| !!! | ATTATGATTTACTAACATTT+TGG | + | chr1.1:53105847-53105866 | MS.gene49348:intron | 15.0% |
| !!! | GATTTTTTGTATTGATTATT+AGG | + | chr1.1:53102721-53102740 | MS.gene49348:intron | 15.0% |
| !!! | GTTTTGTTTTAATATATTCT+AGG | + | chr1.1:53106757-53106776 | MS.gene49348:intron | 15.0% |
| !!! | TTAAACAATTTTTAAACTGT+TGG | - | chr1.1:53102887-53102906 | None:intergenic | 15.0% |
| !!! | TTTTAGCATATGAAATAATT+TGG | + | chr1.1:53104227-53104246 | MS.gene49348:intron | 15.0% |
| !!! | TTTTCTAAAAAATTTCGTAA+TGG | + | chr1.1:53106732-53106751 | MS.gene49348:intron | 15.0% |
| !!! | TTTTTCTCTGAAAAAAAAAA+TGG | - | chr1.1:53102630-53102649 | None:intergenic | 15.0% |
| !! | AATGATATATGGTACAAAAT+TGG | + | chr1.1:53106611-53106630 | MS.gene49348:intron | 20.0% |
| !! | AATGTATATTACCTATAATC+AGG | - | chr1.1:53105001-53105020 | None:intergenic | 20.0% |
| !! | ACAAGCATTAAAAATTGATT+TGG | + | chr1.1:53105161-53105180 | MS.gene49348:intron | 20.0% |
| !! | ATGATATATGGTACAAAATT+GGG | + | chr1.1:53106612-53106631 | MS.gene49348:intron | 20.0% |
| !! | ATTCATATGGAAATGATATA+TGG | + | chr1.1:53106600-53106619 | MS.gene49348:intron | 20.0% |
| !! | ATTCATGTAATATTAAGCAA+GGG | - | chr1.1:53104456-53104475 | None:intergenic | 20.0% |
| !! | CTGTGAAATTAACTAAAAAA+CGG | - | chr1.1:53101858-53101877 | None:intergenic | 20.0% |
| !! | TACATTCAATAGATAGTTAA+TGG | - | chr1.1:53103083-53103102 | None:intergenic | 20.0% |
| !! | TATTCATGTAATATTAAGCA+AGG | - | chr1.1:53104457-53104476 | None:intergenic | 20.0% |
| !! | TCATTTGTAGATATATTGAA+TGG | + | chr1.1:53105618-53105637 | MS.gene49348:intron | 20.0% |
| !! | TTACAAAGCTATTTATTACA+TGG | - | chr1.1:53103477-53103496 | None:intergenic | 20.0% |
| !!! | ATTTGAATAACCAACTTTTT+AGG | + | chr1.1:53102248-53102267 | MS.gene49348:intron | 20.0% |
| !!! | GTTCCTAATTTTGATAAATA+TGG | - | chr1.1:53104508-53104527 | None:intergenic | 20.0% |
| !!! | TAGTGCTTATAATCTTTTTT+TGG | - | chr1.1:53104191-53104210 | None:intergenic | 20.0% |
| ! | AAACTTCATACCTTAGTATT+AGG | - | chr1.1:53104091-53104110 | None:intergenic | 25.0% |
| ! | AAATGTTGTTAATGTGATGT+GGG | + | chr1.1:53101945-53101964 | MS.gene49348:intron | 25.0% |
| ! | AAATTAACCACCTAAAAAGT+TGG | - | chr1.1:53102261-53102280 | None:intergenic | 25.0% |
| ! | AACTGAAACTAAAATGTGTT+TGG | - | chr1.1:53103606-53103625 | None:intergenic | 25.0% |
| ! | AGATAAACAGATAGTTGAAA+CGG | - | chr1.1:53104639-53104658 | None:intergenic | 25.0% |
| ! | AGCATATGAAATAATTTGGA+GGG | + | chr1.1:53104231-53104250 | MS.gene49348:intron | 25.0% |
| ! | AGCTATTTATTACATGGAAA+TGG | - | chr1.1:53103471-53103490 | None:intergenic | 25.0% |
| ! | ATTATAAATGGTTAAGCAGT+TGG | - | chr1.1:53105121-53105140 | None:intergenic | 25.0% |
| ! | GTTAATTTAGTTGAAACATG+TGG | + | chr1.1:53102273-53102292 | MS.gene49348:intron | 25.0% |
| ! | GTTAGAAGAACACATATATT+AGG | + | chr1.1:53102511-53102530 | MS.gene49348:intron | 25.0% |
| ! | TAATGAGAACGTTGTAAAAA+TGG | + | chr1.1:53102036-53102055 | MS.gene49348:intron | 25.0% |
| ! | TAGCATATGAAATAATTTGG+AGG | + | chr1.1:53104230-53104249 | MS.gene49348:intron | 25.0% |
| ! | TCATGAAAGTTGTTCAAATT+TGG | + | chr1.1:53103145-53103164 | MS.gene49348:intron | 25.0% |
| ! | TGGCTAATTACATGATATTA+TGG | + | chr1.1:53102062-53102081 | MS.gene49348:intron | 25.0% |
| ! | TTCATGTAATATTAAGCAAG+GGG | - | chr1.1:53104455-53104474 | None:intergenic | 25.0% |
| ! | TTCTGATTGAAGGTAATTAT+TGG | - | chr1.1:53104277-53104296 | None:intergenic | 25.0% |
| !! | AAATTCGTGAGAAAATTTTG+AGG | - | chr1.1:53103270-53103289 | None:intergenic | 25.0% |
| !! | AACTTTCATGACAACTTTTA+AGG | - | chr1.1:53103136-53103155 | None:intergenic | 25.0% |
| !! | AAGATTTTGCATGATAAACA+GGG | + | chr1.1:53106118-53106137 | MS.gene49348:intron | 25.0% |
| !! | ATTTTCCAAAAACCAAATAC+GGG | - | chr1.1:53102854-53102873 | None:intergenic | 25.0% |
| !! | CATTTTCCAAAAACCAAATA+CGG | - | chr1.1:53102855-53102874 | None:intergenic | 25.0% |
| !! | CTATTAGTTTCATAAAAACC+CGG | - | chr1.1:53105965-53105984 | None:intergenic | 25.0% |
| !! | TAAGATTTTGCATGATAAAC+AGG | + | chr1.1:53106117-53106136 | MS.gene49348:intron | 25.0% |
| !! | TTACACCATTGTTTCTTAAA+TGG | + | chr1.1:53105330-53105349 | MS.gene49348:intron | 25.0% |
| !!! | AAACACATTTTAGTTTCAGT+TGG | + | chr1.1:53103605-53103624 | MS.gene49348:CDS | 25.0% |
| !!! | GCTAAAAGAGTATTTTCTTT+TGG | - | chr1.1:53104214-53104233 | None:intergenic | 25.0% |
| !!! | TTGTATTGATTATTAGGAGT+GGG | + | chr1.1:53102727-53102746 | MS.gene49348:intron | 25.0% |
| !!! | TTTGTATTGATTATTAGGAG+TGG | + | chr1.1:53102726-53102745 | MS.gene49348:intron | 25.0% |
| !!! | TTTTAAGAGAAGCATTTCTT+TGG | + | chr1.1:53102656-53102675 | MS.gene49348:intron | 25.0% |
| AACACGAGAATTAAGAAAGT+TGG | + | chr1.1:53102393-53102412 | MS.gene49348:intron | 30.0% | |
| AATCTCATTAACCACGTATT+TGG | - | chr1.1:53103044-53103063 | None:intergenic | 30.0% | |
| AATGTTTAACCAAAGCGAAA+AGG | - | chr1.1:53102188-53102207 | None:intergenic | 30.0% | |
| ACAATTTCACTGCAGAATTT+AGG | + | chr1.1:53104709-53104728 | MS.gene49348:intron | 30.0% | |
| ACCACATGTCATTATTCATA+TGG | + | chr1.1:53106587-53106606 | MS.gene49348:intron | 30.0% | |
| ACTGAAGTCAATCTTTAATC+AGG | - | chr1.1:53105046-53105065 | None:intergenic | 30.0% | |
| AGAAGAACACATATATTAGG+AGG | + | chr1.1:53102514-53102533 | MS.gene49348:intron | 30.0% | |
| AGAATGTAACACAATCTGTT+AGG | - | chr1.1:53105682-53105701 | None:intergenic | 30.0% | |
| AGCAAATTAGCAAGTCAATA+AGG | - | chr1.1:53102165-53102184 | None:intergenic | 30.0% | |
| AGTTGAACACCTGAAAATTA+TGG | + | chr1.1:53103008-53103027 | MS.gene49348:intron | 30.0% | |
| ATCAGGGAGATCATTATAAA+TGG | - | chr1.1:53105133-53105152 | None:intergenic | 30.0% | |
| ATCTCATTAACCACGTATTT+GGG | - | chr1.1:53103043-53103062 | None:intergenic | 30.0% | |
| ATGTGGTTAATCATGGTATA+TGG | + | chr1.1:53102290-53102309 | MS.gene49348:intron | 30.0% | |
| ATTTCTGCACAAGATATCAA+CGG | - | chr1.1:53106309-53106328 | None:intergenic | 30.0% | |
| CAAATGTTGTTAATGTGATG+TGG | + | chr1.1:53101944-53101963 | MS.gene49348:intron | 30.0% | |
| CAATCAGAAAGTCATTGAAA+AGG | + | chr1.1:53104288-53104307 | MS.gene49348:intron | 30.0% | |
| CACATCACATTAACAACATT+TGG | - | chr1.1:53101946-53101965 | None:intergenic | 30.0% | |
| CTAAGAGAACCATAAAAACA+TGG | - | chr1.1:53106698-53106717 | None:intergenic | 30.0% | |
| CTCTCTATGATGAAATCATT+GGG | - | chr1.1:53102471-53102490 | None:intergenic | 30.0% | |
| CTTGACCATTTAAGAAACAA+TGG | - | chr1.1:53105338-53105357 | None:intergenic | 30.0% | |
| CTTTAATGGTTTAAAAGAGG+TGG | + | chr1.1:53105402-53105421 | MS.gene49348:intron | 30.0% | |
| GAACGTTGTAAAAATGGAAT+TGG | + | chr1.1:53102042-53102061 | MS.gene49348:intron | 30.0% | |
| GATTGAAGGTAATTATTGGA+AGG | - | chr1.1:53104273-53104292 | None:intergenic | 30.0% | |
| GCAAAAACAAATGAAGTTCT+GGG | + | chr1.1:53105990-53106009 | MS.gene49348:CDS | 30.0% | |
| TAATCATGGTATATGGTTCA+TGG | + | chr1.1:53102297-53102316 | MS.gene49348:intron | 30.0% | |
| TACAGAAAGAGCTAATAACA+TGG | + | chr1.1:53104668-53104687 | MS.gene49348:intron | 30.0% | |
| TATTAAAGCTGGATTGACAA+AGG | + | chr1.1:53106153-53106172 | MS.gene49348:CDS | 30.0% | |
| TCCATATGAATAATGACATG+TGG | - | chr1.1:53106591-53106610 | None:intergenic | 30.0% | |
| TCTTTCAATTCTCAAGTACA+AGG | - | chr1.1:53106407-53106426 | None:intergenic | 30.0% | |
| TGATGAATACTCTCAAACAT+CGG | + | chr1.1:53104862-53104881 | MS.gene49348:CDS | 30.0% | |
| TGCAAAAACAAATGAAGTTC+TGG | + | chr1.1:53105989-53106008 | MS.gene49348:CDS | 30.0% | |
| TGTATTTATACGACAAAAGC+AGG | + | chr1.1:53103790-53103809 | MS.gene49348:CDS | 30.0% | |
| TTAAGATTTGAACACTAGAC+TGG | + | chr1.1:53102542-53102561 | MS.gene49348:intron | 30.0% | |
| TTCAATGACTTTCTGATTGA+AGG | - | chr1.1:53104287-53104306 | None:intergenic | 30.0% | |
| TTGAAACATGTGGTTAATCA+TGG | + | chr1.1:53102283-53102302 | MS.gene49348:intron | 30.0% | |
| ! | AAGTCCTAAAAGTGTATCAT+GGG | - | chr1.1:53104394-53104413 | None:intergenic | 30.0% |
| ! | AGATTTTGCATGATAAACAG+GGG | + | chr1.1:53106119-53106138 | MS.gene49348:intron | 30.0% |
| ! | AGATTTTGTCGCAGAAAATA+TGG | + | chr1.1:53103928-53103947 | MS.gene49348:CDS | 30.0% |
| ! | GAGCTTTAATGGTTTAAAAG+AGG | + | chr1.1:53105399-53105418 | MS.gene49348:intron | 30.0% |
| ! | GGTCTTATATTTAGAGACAA+GGG | - | chr1.1:53102361-53102380 | None:intergenic | 30.0% |
| ! | GTTTTTGACACGAATTTGTA+TGG | + | chr1.1:53105273-53105292 | MS.gene49348:intron | 30.0% |
| ! | TCTCATATTATGTTTGCTAC+AGG | + | chr1.1:53104058-53104077 | MS.gene49348:CDS | 30.0% |
| ! | TTTGAAGAAAGCAATGGTTT+TGG | + | chr1.1:53103287-53103306 | MS.gene49348:CDS | 30.0% |
| ! | TTTTCCCATGATACACTTTT+AGG | + | chr1.1:53104387-53104406 | MS.gene49348:intron | 30.0% |
| !! | AGGTTTTGATGGTAAATCAA+GGG | - | chr1.1:53103690-53103709 | None:intergenic | 30.0% |
| !! | CATTTCCAACCATGTTTTTA+TGG | + | chr1.1:53106686-53106705 | MS.gene49348:intron | 30.0% |
| !! | TACCTATAATCAGGTTTTGT+TGG | - | chr1.1:53104992-53105011 | None:intergenic | 30.0% |
| !! | TCTAATGTCAAGTTGATTGA+AGG | + | chr1.1:53103416-53103435 | MS.gene49348:CDS | 30.0% |
| !! | TGAATAACCAACTTTTTAGG+TGG | + | chr1.1:53102251-53102270 | MS.gene49348:intron | 30.0% |
| !! | TTTCATGACAACTTTTAAGG+TGG | - | chr1.1:53103133-53103152 | None:intergenic | 30.0% |
| !!! | AACATTTTGGTTATTTGCAC+AGG | + | chr1.1:53105860-53105879 | MS.gene49348:intron | 30.0% |
| !!! | CGTATTTGGTTTTTGGAAAA+TGG | + | chr1.1:53102853-53102872 | MS.gene49348:intron | 30.0% |
| AAAACCAAATACGGGATAAC+CGG | - | chr1.1:53102846-53102865 | None:intergenic | 35.0% | |
| AAACTACTCCAATCATGCTT+AGG | - | chr1.1:53103332-53103351 | None:intergenic | 35.0% | |
| AATATGAGAGAAACCATCCA+CGG | - | chr1.1:53104047-53104066 | None:intergenic | 35.0% | |
| AATTCCACATGCTTCTTAGT+TGG | + | chr1.1:53104565-53104584 | MS.gene49348:intron | 35.0% | |
| AATTCTCAAGTACAAGGCAA+CGG | - | chr1.1:53106401-53106420 | None:intergenic | 35.0% | |
| ACAAAAACCTGCACAATTTC+AGG | - | chr1.1:53106041-53106060 | None:intergenic | 35.0% | |
| AGCCAACAAAACCTGATTAT+AGG | + | chr1.1:53104987-53105006 | MS.gene49348:CDS | 35.0% | |
| ATAAAAATGCTGAGTTGCAG+AGG | + | chr1.1:53103360-53103379 | MS.gene49348:CDS | 35.0% | |
| ATGTAACACAATCTGTTAGG+AGG | - | chr1.1:53105679-53105698 | None:intergenic | 35.0% | |
| ATTCTCGTGTTTGTGTCAAA+TGG | - | chr1.1:53102384-53102403 | None:intergenic | 35.0% | |
| ATTGAATGGCAGCTATAATC+TGG | + | chr1.1:53105632-53105651 | MS.gene49348:intron | 35.0% | |
| CACAAAGATATGCATGTAGA+TGG | - | chr1.1:53103200-53103219 | None:intergenic | 35.0% | |
| CACGAATTTGAAGAAAGCAA+TGG | + | chr1.1:53103281-53103300 | MS.gene49348:CDS | 35.0% | |
| CAGAAGATCATTGATCTCAA+TGG | - | chr1.1:53105805-53105824 | None:intergenic | 35.0% | |
| CTTGATTTACCTGTGAATCA+AGG | - | chr1.1:53106267-53106286 | None:intergenic | 35.0% | |
| GAAGTCGACGTATTCATTAA+TGG | - | chr1.1:53106379-53106398 | None:intergenic | 35.0% | |
| GAGAACCATAAAAACATGGT+TGG | - | chr1.1:53106694-53106713 | None:intergenic | 35.0% | |
| GCATAGACGAGTAATTTCTT+TGG | - | chr1.1:53103248-53103267 | None:intergenic | 35.0% | |
| GCTCTCTATGATGAAATCAT+TGG | - | chr1.1:53102472-53102491 | None:intergenic | 35.0% | |
| GGAAAAAGGAAAATGACTAG+AGG | + | chr1.1:53105423-53105442 | MS.gene49348:intron | 35.0% | |
| GGTTTAAAAGAGGTGGAAAA+AGG | + | chr1.1:53105409-53105428 | MS.gene49348:intron | 35.0% | |
| GTCAACACAGTTTAAATGAG+TGG | - | chr1.1:53103111-53103130 | None:intergenic | 35.0% | |
| GTGCAAAAAATGAGATGACT+AGG | - | chr1.1:53105568-53105587 | None:intergenic | 35.0% | |
| TAAAAAGGTCGAAGTCATAG+TGG | - | chr1.1:53101673-53101692 | None:intergenic | 35.0% | |
| TAAGGGAGAAGAACAAGAAA+GGG | - | chr1.1:53101492-53101511 | None:intergenic | 35.0% | |
| TATTCCTTTCCAGGAATATC+AGG | - | chr1.1:53103647-53103666 | None:intergenic | 35.0% | |
| TCTATTGCATATTCCTTTCC+AGG | - | chr1.1:53103656-53103675 | None:intergenic | 35.0% | |
| TGCTAAAGATGGATCAATAG+AGG | + | chr1.1:53104756-53104775 | MS.gene49348:CDS | 35.0% | |
| TTAAAATTAGCCAACCCTCA+AGG | - | chr1.1:53104547-53104566 | None:intergenic | 35.0% | |
| TTAACAGCTACTGAAGTTAG+AGG | - | chr1.1:53102942-53102961 | None:intergenic | 35.0% | |
| TTATACCGATATTGCTAGGT+TGG | - | chr1.1:53101895-53101914 | None:intergenic | 35.0% | |
| TTCGTAAAACGTAGCTCATT+TGG | - | chr1.1:53101918-53101937 | None:intergenic | 35.0% | |
| TTCTCGTGTTTGTGTCAAAT+GGG | - | chr1.1:53102383-53102402 | None:intergenic | 35.0% | |
| TTGGTTATACCGATATTGCT+AGG | - | chr1.1:53101899-53101918 | None:intergenic | 35.0% | |
| TTTAAGAGAGAGTTTGAGAG+AGG | + | chr1.1:53102902-53102921 | MS.gene49348:intron | 35.0% | |
| ! | AATCGTGTGTATCTAAAACC+AGG | + | chr1.1:53102816-53102835 | MS.gene49348:intron | 35.0% |
| ! | AATGCTTGTTAAGCAAGATC+AGG | - | chr1.1:53105150-53105169 | None:intergenic | 35.0% |
| ! | ACGTCTACACAGCAAATTTT+AGG | + | chr1.1:53105907-53105926 | MS.gene49348:CDS | 35.0% |
| ! | ATCGTGTGTATCTAAAACCA+GGG | + | chr1.1:53102817-53102836 | MS.gene49348:intron | 35.0% |
| ! | ATGCTTGTTAAGCAAGATCA+GGG | - | chr1.1:53105149-53105168 | None:intergenic | 35.0% |
| ! | CAAGTCCTAAAAGTGTATCA+TGG | - | chr1.1:53104395-53104414 | None:intergenic | 35.0% |
| ! | CGTGGTTAACCATAATTTTC+AGG | - | chr1.1:53103020-53103039 | None:intergenic | 35.0% |
| ! | GGGTCTTATATTTAGAGACA+AGG | - | chr1.1:53102362-53102381 | None:intergenic | 35.0% |
| ! | TAGTTGGCTCAATTTCCATA+CGG | + | chr1.1:53104581-53104600 | MS.gene49348:intron | 35.0% |
| ! | TTTGCAGTTGCTATTAAAGC+TGG | + | chr1.1:53106142-53106161 | MS.gene49348:CDS | 35.0% |
| !! | AAACATCGGTTCCTTCAATT+TGG | + | chr1.1:53104876-53104895 | MS.gene49348:CDS | 35.0% |
| !! | AACATCGGTTCCTTCAATTT+GGG | + | chr1.1:53104877-53104896 | MS.gene49348:CDS | 35.0% |
| !! | AGGTATTGAATTCCATACTG+AGG | + | chr1.1:53103958-53103977 | MS.gene49348:CDS | 35.0% |
| !! | CAGGTTTTGATGGTAAATCA+AGG | - | chr1.1:53103691-53103710 | None:intergenic | 35.0% |
| !! | GAGTTTGCTGGTATCTTTAA+TGG | + | chr1.1:53103749-53103768 | MS.gene49348:CDS | 35.0% |
| !! | GATGCTAAAAGAGTATTTGC+TGG | - | chr1.1:53104164-53104183 | None:intergenic | 35.0% |
| !! | GGTTTTTGGAAAATGGTACT+TGG | + | chr1.1:53102860-53102879 | MS.gene49348:intron | 35.0% |
| !! | TTGAGAGTATTCATCAACCT+GGG | - | chr1.1:53104858-53104877 | None:intergenic | 35.0% |
| !! | TTTGAGAGTATTCATCAACC+TGG | - | chr1.1:53104859-53104878 | None:intergenic | 35.0% |
| !!! | AAGAAAGCAATGGTTTTGGA+TGG | + | chr1.1:53103291-53103310 | MS.gene49348:CDS | 35.0% |
| !!! | CACATTTTAGTTTCAGTTGG+AGG | + | chr1.1:53103608-53103627 | MS.gene49348:CDS | 35.0% |
| !!! | GTTATCCCGTATTTGGTTTT+TGG | + | chr1.1:53102846-53102865 | MS.gene49348:intron | 35.0% |
| !!! | TAATTTGCTCCTTTTCGCTT+TGG | + | chr1.1:53102176-53102195 | MS.gene49348:intron | 35.0% |
| AAAAGAAAACTTCCCTGTGC+AGG | + | chr1.1:53106461-53106480 | MS.gene49348:intron | 40.0% | |
| AAAGATACCAGCAAACTCCA+AGG | - | chr1.1:53103747-53103766 | None:intergenic | 40.0% | |
| AAGATATCAACGGAAGACAC+TGG | - | chr1.1:53106299-53106318 | None:intergenic | 40.0% | |
| AAGTTCCTCTTCCATAGCTT+GGG | + | chr1.1:53101822-53101841 | MS.gene49348:intron | 40.0% | |
| AATATTAAGCAAGGGGCTGA+AGG | - | chr1.1:53104448-53104467 | None:intergenic | 40.0% | |
| ACAGTGAACCTAAGCATGAT+TGG | + | chr1.1:53103321-53103340 | MS.gene49348:CDS | 40.0% | |
| AGAAGATTGCCATTGTTGGT+GGG | + | chr1.1:53103711-53103730 | MS.gene49348:CDS | 40.0% | |
| AGAGTGAAGGAACGAGAAAA+TGG | - | chr1.1:53101551-53101570 | None:intergenic | 40.0% | |
| AGGACGCAAACCTAATACTA+AGG | + | chr1.1:53104078-53104097 | MS.gene49348:CDS | 40.0% | |
| AGTGTCCAACCTAGCAATAT+CGG | + | chr1.1:53101887-53101906 | MS.gene49348:intron | 40.0% | |
| AGTTTCATAAAAACCCGGTC+TGG | - | chr1.1:53105960-53105979 | None:intergenic | 40.0% | |
| ATTCATCAACCTGGGTGAAT+AGG | - | chr1.1:53104850-53104869 | None:intergenic | 40.0% | |
| ATTGGTAGACTTCTTCGTGA+GGG | - | chr1.1:53106539-53106558 | None:intergenic | 40.0% | |
| CATCTCCTTTCAGAAAGACA+CGG | - | chr1.1:53102224-53102243 | None:intergenic | 40.0% | |
| CATTCCTGATATTCCTGGAA+AGG | + | chr1.1:53103640-53103659 | MS.gene49348:CDS | 40.0% | |
| CCAGGAATATCAGGAATGAA+GGG | - | chr1.1:53103638-53103657 | None:intergenic | 40.0% | |
| CTCTTTCGAATCTTCCTAGT+GGG | - | chr1.1:53106244-53106263 | None:intergenic | 40.0% | |
| CTTGTTGAAGTGTGGTATTG+TGG | + | chr1.1:53102679-53102698 | MS.gene49348:intron | 40.0% | |
| GAATAAGAAACCCCAAGCTA+TGG | - | chr1.1:53101836-53101855 | None:intergenic | 40.0% | |
| GAGTGAAGGAACGAGAAAAT+GGG | - | chr1.1:53101550-53101569 | None:intergenic | 40.0% | |
| GATGATATACAACCACACAC+TGG | - | chr1.1:53105071-53105090 | None:intergenic | 40.0% | |
| GGTGTGAAGATTGCTAAAGA+TGG | + | chr1.1:53104745-53104764 | MS.gene49348:CDS | 40.0% | |
| GTAAGGGAGAAGAACAAGAA+AGG | - | chr1.1:53101493-53101512 | None:intergenic | 40.0% | |
| GTTCCTTCAATTTGGGCAAT+CGG | + | chr1.1:53104884-53104903 | MS.gene49348:CDS | 40.0% | |
| TAAGTTCCTCTTCCATAGCT+TGG | + | chr1.1:53101821-53101840 | MS.gene49348:intron | 40.0% | |
| TAGTATGCTGAACAGAATGC+AGG | - | chr1.1:53106335-53106354 | None:intergenic | 40.0% | |
| TATTGGTAGACTTCTTCGTG+AGG | - | chr1.1:53106540-53106559 | None:intergenic | 40.0% | |
| TCCAGGAATATCAGGAATGA+AGG | - | chr1.1:53103639-53103658 | None:intergenic | 40.0% | |
| TCTCGTGTTTGTGTCAAATG+GGG | - | chr1.1:53102382-53102401 | None:intergenic | 40.0% | |
| TGACACGAATTTGTATGGTG+AGG | + | chr1.1:53105278-53105297 | MS.gene49348:intron | 40.0% | |
| TGGTTCTCTTAGCATGCTAT+TGG | + | chr1.1:53106706-53106725 | MS.gene49348:intron | 40.0% | |
| TTTCACCGTGTCTTTCTGAA+AGG | + | chr1.1:53102216-53102235 | MS.gene49348:intron | 40.0% | |
| TTTGCGAGGATTTGATGAAG+AGG | + | chr1.1:53103814-53103833 | MS.gene49348:CDS | 40.0% | |
| ! | AATTTAGGACTGGAGTCTGT+TGG | + | chr1.1:53104724-53104743 | MS.gene49348:CDS | 40.0% |
| ! | ACGAGAAAATGGGAAGGTTT+TGG | - | chr1.1:53101540-53101559 | None:intergenic | 40.0% |
| ! | AGAGTGTTTCGGGTAAGTAA+GGG | - | chr1.1:53101509-53101528 | None:intergenic | 40.0% |
| ! | AGCAAATTTTAGGCCACTGA+AGG | + | chr1.1:53105917-53105936 | MS.gene49348:CDS | 40.0% |
| ! | CATCATGACGAGAGCTTTAA+TGG | + | chr1.1:53105388-53105407 | MS.gene49348:intron | 40.0% |
| ! | CTCACACAGTTGATGTTGAT+GGG | + | chr1.1:53103567-53103586 | MS.gene49348:CDS | 40.0% |
| ! | CTCTCTTTAAAGACCAGCAA+AGG | + | chr1.1:53104019-53104038 | MS.gene49348:CDS | 40.0% |
| ! | GACTTCGACCTTTTTACCAT+CGG | + | chr1.1:53101677-53101696 | MS.gene49348:CDS | 40.0% |
| ! | GGATTGAGAGATTAGGGTTT+TGG | - | chr1.1:53101591-53101610 | None:intergenic | 40.0% |
| ! | TTCACTGCAGAATTTAGGAC+TGG | + | chr1.1:53104714-53104733 | MS.gene49348:intron | 40.0% |
| !! | GCAATCTTCTCAGGTTTTGA+TGG | - | chr1.1:53103701-53103720 | None:intergenic | 40.0% |
| !! | GCAGAAAATATGGCTCTAAG+AGG | + | chr1.1:53103938-53103957 | MS.gene49348:CDS | 40.0% |
| !! | TGGTGAAGAAGAGAGTGTTT+CGG | - | chr1.1:53101520-53101539 | None:intergenic | 40.0% |
| !! | TTCTTTGGCTTGTTGAAGTG+TGG | + | chr1.1:53102671-53102690 | MS.gene49348:intron | 40.0% |
| !! | TTGAGAGATTAGGGTTTTGG+TGG | - | chr1.1:53101588-53101607 | None:intergenic | 40.0% |
| AAAATTGGAGGCAAAGCGAG+AGG | - | chr1.1:53101726-53101745 | None:intergenic | 45.0% | |
| AATGTAACCCCCACCAACAA+TGG | - | chr1.1:53103723-53103742 | None:intergenic | 45.0% | |
| ACTATCTCATCGGATACCAC+CGG | + | chr1.1:53101782-53101801 | MS.gene49348:CDS | 45.0% | |
| AGAATCATCCCACCTTTCCA+CGG | - | chr1.1:53103442-53103461 | None:intergenic | 45.0% | |
| AGACTTCTTCGTGAGGGAAA+GGG | - | chr1.1:53106533-53106552 | None:intergenic | 45.0% | |
| AGCAGCGTTAGCACCAAAAT+TGG | - | chr1.1:53101741-53101760 | None:intergenic | 45.0% | |
| AGCGTTAGCACCAAAATTGG+AGG | - | chr1.1:53101738-53101757 | None:intergenic | 45.0% | |
| AGTTCCTCTTCCATAGCTTG+GGG | + | chr1.1:53101823-53101842 | MS.gene49348:intron | 45.0% | |
| ATTAACCACGTATTTGGGCG+TGG | - | chr1.1:53103038-53103057 | None:intergenic | 45.0% | |
| ATTGAACTCCAGTGTCCTTG+AGG | + | chr1.1:53104529-53104548 | MS.gene49348:intron | 45.0% | |
| CAATCGGAGATGCTACAAAC+AGG | + | chr1.1:53104900-53104919 | MS.gene49348:CDS | 45.0% | |
| CCAACAATGGCAATCTTCTC+AGG | - | chr1.1:53103710-53103729 | None:intergenic | 45.0% | |
| CCATCAACATCAACTGTGTG+AGG | - | chr1.1:53103569-53103588 | None:intergenic | 45.0% | |
| CCCTTCATTCCTGATATTCC+TGG | + | chr1.1:53103635-53103654 | MS.gene49348:CDS | 45.0% | |
| CCTGAGAAGATTGCCATTGT+TGG | + | chr1.1:53103707-53103726 | MS.gene49348:CDS | 45.0% | |
| GAAGATTGCCATTGTTGGTG+GGG | + | chr1.1:53103712-53103731 | MS.gene49348:CDS | 45.0% | |
| GAAGGAACGAGAAAATGGGA+AGG | - | chr1.1:53101546-53101565 | None:intergenic | 45.0% | |
| GAGAAGATTGCCATTGTTGG+TGG | + | chr1.1:53103710-53103729 | MS.gene49348:CDS | 45.0% | |
| GATGAAGAGGTAAGCAAGCA+TGG | + | chr1.1:53103827-53103846 | MS.gene49348:intron | 45.0% | |
| GCACAGGCTGTAGAACAATA+TGG | + | chr1.1:53105876-53105895 | MS.gene49348:intron | 45.0% | |
| GCAGACTTTGATGCTACTGT+AGG | + | chr1.1:53106175-53106194 | MS.gene49348:CDS | 45.0% | |
| GCTCTTTCGAATCTTCCTAG+TGG | - | chr1.1:53106245-53106264 | None:intergenic | 45.0% | |
| GGAAAGGTGGGATGATTCTT+TGG | + | chr1.1:53103443-53103462 | MS.gene49348:intron | 45.0% | |
| GTCTCCTGTAGCTATCACTA+AGG | + | chr1.1:53103982-53104001 | MS.gene49348:CDS | 45.0% | |
| TACATTGCCTTGGAGTTTGC+TGG | + | chr1.1:53103737-53103756 | MS.gene49348:CDS | 45.0% | |
| TAGACTTCTTCGTGAGGGAA+AGG | - | chr1.1:53106534-53106553 | None:intergenic | 45.0% | |
| TCAACAGACCCGAGTAATCA+TGG | - | chr1.1:53106487-53106506 | None:intergenic | 45.0% | |
| TCAAGAACATGCAAGCCGTA+TGG | - | chr1.1:53104599-53104618 | None:intergenic | 45.0% | |
| TCCGTTCTCCACTATCTCAT+CGG | + | chr1.1:53101772-53101791 | MS.gene49348:CDS | 45.0% | |
| TCGAAAGAGCCTTGATTCAC+AGG | + | chr1.1:53106255-53106274 | MS.gene49348:CDS | 45.0% | |
| TCTCCGATTGCCCAAATTGA+AGG | - | chr1.1:53104890-53104909 | None:intergenic | 45.0% | |
| TGATGCTCCTGAAATTGTGC+AGG | + | chr1.1:53106031-53106050 | MS.gene49348:CDS | 45.0% | |
| TTCTGGGTTTGCACATGTGT+GGG | + | chr1.1:53106006-53106025 | MS.gene49348:CDS | 45.0% | |
| TTGAACTCCAGTGTCCTTGA+GGG | + | chr1.1:53104530-53104549 | MS.gene49348:intron | 45.0% | |
| TTGTGCAGCTGTGTAATACG+TGG | + | chr1.1:53103215-53103234 | MS.gene49348:intron | 45.0% | |
| ! | AACTCCTCCAATTGGTGGTT+GGG | - | chr1.1:53105739-53105758 | None:intergenic | 45.0% |
| ! | AAGATTGCCATTGTTGGTGG+GGG | + | chr1.1:53103713-53103732 | MS.gene49348:CDS | 45.0% |
| ! | AAGGTCGAAGTCATAGTGGA+TGG | - | chr1.1:53101669-53101688 | None:intergenic | 45.0% |
| ! | ACAGCTTTTGCTTCAGAGTC+TGG | - | chr1.1:53106788-53106807 | None:intergenic | 45.0% |
| ! | ACTCCAGTTGCTTTGATGGA+GGG | + | chr1.1:53104932-53104951 | MS.gene49348:CDS | 45.0% |
| ! | AGTGTTACTCCTATTCACCC+AGG | + | chr1.1:53104838-53104857 | MS.gene49348:intron | 45.0% |
| ! | CAATGGATTTAGCCTGCCAT+AGG | - | chr1.1:53105788-53105807 | None:intergenic | 45.0% |
| ! | CACTAGACTGGTTGTGTTTG+TGG | + | chr1.1:53102554-53102573 | MS.gene49348:intron | 45.0% |
| ! | CCTCACACAGTTGATGTTGA+TGG | + | chr1.1:53103566-53103585 | MS.gene49348:CDS | 45.0% |
| ! | GTATCTAAAACCAGGGAAGC+CGG | + | chr1.1:53102824-53102843 | MS.gene49348:intron | 45.0% |
| ! | TCTCACTCCAGTTGCTTTGA+TGG | + | chr1.1:53104928-53104947 | MS.gene49348:CDS | 45.0% |
| ! | TCTCGCTTTGCCTCCAATTT+TGG | + | chr1.1:53101725-53101744 | MS.gene49348:CDS | 45.0% |
| ! | TCTGAAGCAAAAGCTGTAGC+CGG | + | chr1.1:53106791-53106810 | MS.gene49348:CDS | 45.0% |
| ! | TGAGCCAACTAAGAAGCATG+TGG | - | chr1.1:53104572-53104591 | None:intergenic | 45.0% |
| !! | GAGAGTGTTTCGGGTAAGTA+AGG | - | chr1.1:53101510-53101529 | None:intergenic | 45.0% |
| !! | GGTGAAGAAGAGAGTGTTTC+GGG | - | chr1.1:53101519-53101538 | None:intergenic | 45.0% |
| !! | TCCGATGAGATAGTGGAGAA+CGG | - | chr1.1:53101776-53101795 | None:intergenic | 45.0% |
| !! | TAATAGTTTAAAAAAAAAAA+TGG | - | chr1.1:53105313-53105332 | None:intergenic | 5.0% |
| ACTCCCTCCATCAAAGCAAC+TGG | - | chr1.1:53104938-53104957 | None:intergenic | 50.0% | |
| AGACCAACTCCTCCAATTGG+TGG | - | chr1.1:53105744-53105763 | None:intergenic | 50.0% | |
| AGGAGCAGGTGAATGACCTA+TGG | + | chr1.1:53105769-53105788 | MS.gene49348:intron | 50.0% | |
| ATTGAAGGCCGTGGAAAGGT+GGG | + | chr1.1:53103431-53103450 | MS.gene49348:intron | 50.0% | |
| CAACCACCAATTGGAGGAGT+TGG | + | chr1.1:53105738-53105757 | MS.gene49348:CDS | 50.0% | |
| CTACAGGAGACTCCTCAGTA+TGG | - | chr1.1:53103973-53103992 | None:intergenic | 50.0% | |
| CTGAGGAGTTTGTCACCATG+AGG | + | chr1.1:53106215-53106234 | MS.gene49348:CDS | 50.0% | |
| CTGTGCAGGCCATGATTACT+CGG | + | chr1.1:53106475-53106494 | MS.gene49348:intron | 50.0% | |
| GAAACCCCAAGCTATGGAAG+AGG | - | chr1.1:53101830-53101849 | None:intergenic | 50.0% | |
| GAAGCCGGTTATCCCGTATT+TGG | + | chr1.1:53102839-53102858 | MS.gene49348:intron | 50.0% | |
| GACTTCTTCGTGAGGGAAAG+GGG | - | chr1.1:53106532-53106551 | None:intergenic | 50.0% | |
| GAGAGAAGGTGAGAGAGTGA+AGG | - | chr1.1:53101564-53101583 | None:intergenic | 50.0% | |
| GAGTAATCATGGCCTGCACA+GGG | - | chr1.1:53106476-53106495 | None:intergenic | 50.0% | |
| GCAGCAACTACAACAACCAC+CGG | - | chr1.1:53105513-53105532 | None:intergenic | 50.0% | |
| GCTATCACTAAGGCAGCTGA+TGG | + | chr1.1:53103992-53104011 | MS.gene49348:CDS | 50.0% | |
| GCTGCCTTAGTGATAGCTAC+AGG | - | chr1.1:53103989-53104008 | None:intergenic | 50.0% | |
| GGGAGGGGATTGAGAGATTA+GGG | - | chr1.1:53101597-53101616 | None:intergenic | 50.0% | |
| GGTGGTATCCGATGAGATAG+TGG | - | chr1.1:53101783-53101802 | None:intergenic | 50.0% | |
| GTGAGACCAACTCCTCCAAT+TGG | - | chr1.1:53105747-53105766 | None:intergenic | 50.0% | |
| GTGTTCTCCCAACCACCAAT+TGG | + | chr1.1:53105729-53105748 | MS.gene49348:CDS | 50.0% | |
| GTTAACCACGCCCAAATACG+TGG | + | chr1.1:53103030-53103049 | MS.gene49348:intron | 50.0% | |
| GTTGATTGAAGGCCGTGGAA+AGG | + | chr1.1:53103427-53103446 | MS.gene49348:CDS | 50.0% | |
| TCTGGGTTTGCACATGTGTG+GGG | + | chr1.1:53106007-53106026 | MS.gene49348:CDS | 50.0% | |
| TGACTTCAGTGACCAGTGTG+TGG | + | chr1.1:53105056-53105075 | MS.gene49348:intron | 50.0% | |
| TGTGCAGGCCATGATTACTC+GGG | + | chr1.1:53106476-53106495 | MS.gene49348:intron | 50.0% | |
| TTCTCCCAACCACCAATTGG+AGG | + | chr1.1:53105732-53105751 | MS.gene49348:CDS | 50.0% | |
| ! | AGGAGTGGGTTTACTGAGTC+AGG | + | chr1.1:53102741-53102760 | MS.gene49348:intron | 50.0% |
| ! | AGTTGCTTTGATGGAGGGAG+TGG | + | chr1.1:53104937-53104956 | MS.gene49348:CDS | 50.0% |
| ! | CAACTCCTCCAATTGGTGGT+TGG | - | chr1.1:53105740-53105759 | None:intergenic | 50.0% |
| ! | CACTCCAGTTGCTTTGATGG+AGG | + | chr1.1:53104931-53104950 | MS.gene49348:CDS | 50.0% |
| ! | CGACAAAAGCAGGTTTTGCG+AGG | + | chr1.1:53103800-53103819 | MS.gene49348:CDS | 50.0% |
| ! | GTTCTGGGTTTGCACATGTG+TGG | + | chr1.1:53106005-53106024 | MS.gene49348:CDS | 50.0% |
| !! | AAAGACCAGCAAAGGTACCG+TGG | + | chr1.1:53104027-53104046 | MS.gene49348:CDS | 50.0% |
| !! | AGGGTTTTGGTGGAGAGAGA+AGG | - | chr1.1:53101578-53101597 | None:intergenic | 50.0% |
| !! | GTCAAGTTGATTGAAGGCCG+TGG | + | chr1.1:53103422-53103441 | MS.gene49348:CDS | 50.0% |
| !! | GTCGAAGTCATAGTGGATGG+CGG | - | chr1.1:53101666-53101685 | None:intergenic | 50.0% |
| !! | TACCAGCGCCGATGGTAAAA+AGG | - | chr1.1:53101688-53101707 | None:intergenic | 50.0% |
| !! | TCGAAGTCATAGTGGATGGC+GGG | - | chr1.1:53101665-53101684 | None:intergenic | 50.0% |
| ACAAACTCCTCAGCTGCGGT+TGG | - | chr1.1:53106208-53106227 | None:intergenic | 55.0% | |
| ACCATCCACGGTACCTTTGC+TGG | - | chr1.1:53104035-53104054 | None:intergenic | 55.0% | |
| ACTCCAGTGTCCTTGAGGGT+TGG | + | chr1.1:53104534-53104553 | MS.gene49348:intron | 55.0% | |
| ATCTCATCGGATACCACCGG+AGG | + | chr1.1:53101785-53101804 | MS.gene49348:CDS | 55.0% | |
| CAAACTCCTCAGCTGCGGTT+GGG | - | chr1.1:53106207-53106226 | None:intergenic | 55.0% | |
| CGAGTAATCATGGCCTGCAC+AGG | - | chr1.1:53106477-53106496 | None:intergenic | 55.0% | |
| CTTCCTAGTGGGAGTCCTCA+TGG | - | chr1.1:53106233-53106252 | None:intergenic | 55.0% | |
| GATTGAAGGCCGTGGAAAGG+TGG | + | chr1.1:53103430-53103449 | MS.gene49348:intron | 55.0% | |
| GCAGGTGAATGACCTATGGC+AGG | + | chr1.1:53105773-53105792 | MS.gene49348:intron | 55.0% | |
| GCTGAGTTGCAGAGGCTTAC+TGG | + | chr1.1:53103368-53103387 | MS.gene49348:CDS | 55.0% | |
| GGGGAGGGGATTGAGAGATT+AGG | - | chr1.1:53101598-53101617 | None:intergenic | 55.0% | |
| GGTGACAAACTCCTCAGCTG+CGG | - | chr1.1:53106212-53106231 | None:intergenic | 55.0% | |
| GTCCGCGCTGAATCGCAAAA+CGG | + | chr1.1:53101632-53101651 | MS.gene49348:CDS | 55.0% | |
| TAGCCAACCCTCAAGGACAC+TGG | - | chr1.1:53104540-53104559 | None:intergenic | 55.0% | |
| TCACCATGAGGACTCCCACT+AGG | + | chr1.1:53106227-53106246 | MS.gene49348:CDS | 55.0% | |
| TGGTGGGGGTTACATTGCCT+TGG | + | chr1.1:53103727-53103746 | MS.gene49348:CDS | 55.0% | |
| ! | AGTTGGTCTCACAGAGGAGC+AGG | + | chr1.1:53105755-53105774 | MS.gene49348:CDS | 55.0% |
| ! | GACCTTTTTACCATCGGCGC+TGG | + | chr1.1:53101683-53101702 | MS.gene49348:CDS | 55.0% |
| ! | TGGAGGAGTTGGTCTCACAG+AGG | + | chr1.1:53105749-53105768 | MS.gene49348:CDS | 55.0% |
| !! | ACCAGCAAAGGTACCGTGGA+TGG | + | chr1.1:53104031-53104050 | MS.gene49348:CDS | 55.0% |
| !! | CGAAGTCATAGTGGATGGCG+GGG | - | chr1.1:53101664-53101683 | None:intergenic | 55.0% |
| !! | TGTGTGATCGAGCTTGCTGC+CGG | + | chr1.1:53105491-53105510 | MS.gene49348:intron | 55.0% |
| !! | TTTACCATCGGCGCTGGTAG+TGG | + | chr1.1:53101689-53101708 | MS.gene49348:CDS | 55.0% |
| CACTGAAGGCCACCCTCTCT+GGG | + | chr1.1:53105931-53105950 | MS.gene49348:CDS | 60.0% | |
| CATTCACCCAACCGCAGCTG+AGG | + | chr1.1:53106198-53106217 | MS.gene49348:CDS | 60.0% | |
| GGTTGGGAGAACACAGCAGC+AGG | - | chr1.1:53105723-53105742 | None:intergenic | 60.0% | |
| TGAGGGAAAGGGGTGACAGC+AGG | - | chr1.1:53106522-53106541 | None:intergenic | 60.0% | |
| ! | TACGGGATAACCGGCTTCCC+TGG | - | chr1.1:53102837-53102856 | None:intergenic | 60.0% |
| ! | TCGGATACCACCGGAGGTGT+CGG | + | chr1.1:53101791-53101810 | MS.gene49348:CDS | 60.0% |
| !! | CGCCGTTTTGCGATTCAGCG+CGG | - | chr1.1:53101637-53101656 | None:intergenic | 60.0% |
| CCACTGAAGGCCACCCTCTC+TGG | + | chr1.1:53105930-53105949 | MS.gene49348:CDS | 65.0% | |
| CCAGAGAGGGTGGCCTTCAG+TGG | - | chr1.1:53105933-53105952 | None:intergenic | 65.0% | |
| CCCTCTCTGGGCTTCCAGAC+CGG | + | chr1.1:53105943-53105962 | MS.gene49348:CDS | 65.0% | |
| CCGGTCTGGAAGCCCAGAGA+GGG | - | chr1.1:53105946-53105965 | None:intergenic | 65.0% | |
| CCTCTCTGGGCTTCCAGACC+GGG | + | chr1.1:53105944-53105963 | MS.gene49348:CDS | 65.0% | |
| CGATTCAGCGCGGACAGCGA+AGG | - | chr1.1:53101627-53101646 | None:intergenic | 65.0% | |
| GTCTGGAAGCCCAGAGAGGG+TGG | - | chr1.1:53105943-53105962 | None:intergenic | 65.0% | |
| TGGAGGCAAAGCGAGAGGCG+CGG | - | chr1.1:53101721-53101740 | None:intergenic | 65.0% | |
| TTACGTGCCGCCGACACCTC+CGG | - | chr1.1:53101804-53101823 | None:intergenic | 65.0% | |
| ! | ACCACCACTACCAGCGCCGA+TGG | - | chr1.1:53101696-53101715 | None:intergenic | 65.0% |
| !! | ACCATCGGCGCTGGTAGTGG+TGG | + | chr1.1:53101692-53101711 | MS.gene49348:CDS | 65.0% |
| !! | GATACCACCGGAGGTGTCGG+CGG | + | chr1.1:53101794-53101813 | MS.gene49348:CDS | 65.0% |
| !! | GTGATCGAGCTTGCTGCCGG+TGG | + | chr1.1:53105494-53105513 | MS.gene49348:intron | 65.0% |
| CAGCGCGGACAGCGAAGGTG+CGG | - | chr1.1:53101622-53101641 | None:intergenic | 70.0% | |
| CCCGGTCTGGAAGCCCAGAG+AGG | - | chr1.1:53105947-53105966 | None:intergenic | 70.0% | |
| ! | ACAGCGAAGGTGCGGCGGGG+AGG | - | chr1.1:53101614-53101633 | None:intergenic | 75.0% |
| ! | AGCGAAGGTGCGGCGGGGAG+GGG | - | chr1.1:53101612-53101631 | None:intergenic | 75.0% |
| ! | CAGCGAAGGTGCGGCGGGGA+GGG | - | chr1.1:53101613-53101632 | None:intergenic | 75.0% |
| ! | CGCGGACAGCGAAGGTGCGG+CGG | - | chr1.1:53101619-53101638 | None:intergenic | 75.0% |
| ! | CGGACAGCGAAGGTGCGGCG+GGG | - | chr1.1:53101617-53101636 | None:intergenic | 75.0% |
| ! | GCGGACAGCGAAGGTGCGGC+GGG | - | chr1.1:53101618-53101637 | None:intergenic | 75.0% |
| ! | CGTGCCGCCGACACCTCCGG+TGG | - | chr1.1:53101801-53101820 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 53101458 | 53106820 | 53101458 | ID=MS.gene49348 |
| chr1.1 | mRNA | 53101458 | 53106820 | 53101458 | ID=MS.gene49348.t1;Parent=MS.gene49348 |
| chr1.1 | exon | 53101458 | 53101819 | 53101458 | ID=MS.gene49348.t1.exon1;Parent=MS.gene49348.t1 |
| chr1.1 | CDS | 53101458 | 53101819 | 53101458 | ID=cds.MS.gene49348.t1;Parent=MS.gene49348.t1 |
| chr1.1 | exon | 53103223 | 53103448 | 53103223 | ID=MS.gene49348.t1.exon2;Parent=MS.gene49348.t1 |
| chr1.1 | CDS | 53103223 | 53103448 | 53103223 | ID=cds.MS.gene49348.t1;Parent=MS.gene49348.t1 |
| chr1.1 | exon | 53103557 | 53103835 | 53103557 | ID=MS.gene49348.t1.exon3;Parent=MS.gene49348.t1 |
| chr1.1 | CDS | 53103557 | 53103835 | 53103557 | ID=cds.MS.gene49348.t1;Parent=MS.gene49348.t1 |
| chr1.1 | exon | 53103923 | 53104099 | 53103923 | ID=MS.gene49348.t1.exon4;Parent=MS.gene49348.t1 |
| chr1.1 | CDS | 53103923 | 53104099 | 53103923 | ID=cds.MS.gene49348.t1;Parent=MS.gene49348.t1 |
| chr1.1 | exon | 53104724 | 53104777 | 53104724 | ID=MS.gene49348.t1.exon5;Parent=MS.gene49348.t1 |
| chr1.1 | CDS | 53104724 | 53104777 | 53104724 | ID=cds.MS.gene49348.t1;Parent=MS.gene49348.t1 |
| chr1.1 | exon | 53104860 | 53105008 | 53104860 | ID=MS.gene49348.t1.exon6;Parent=MS.gene49348.t1 |
| chr1.1 | CDS | 53104860 | 53105008 | 53104860 | ID=cds.MS.gene49348.t1;Parent=MS.gene49348.t1 |
| chr1.1 | exon | 53105713 | 53105776 | 53105713 | ID=MS.gene49348.t1.exon7;Parent=MS.gene49348.t1 |
| chr1.1 | CDS | 53105713 | 53105776 | 53105713 | ID=cds.MS.gene49348.t1;Parent=MS.gene49348.t1 |
| chr1.1 | exon | 53105882 | 53106052 | 53105882 | ID=MS.gene49348.t1.exon8;Parent=MS.gene49348.t1 |
| chr1.1 | CDS | 53105882 | 53106052 | 53105882 | ID=cds.MS.gene49348.t1;Parent=MS.gene49348.t1 |
| chr1.1 | exon | 53106139 | 53106276 | 53106139 | ID=MS.gene49348.t1.exon9;Parent=MS.gene49348.t1 |
| chr1.1 | CDS | 53106139 | 53106276 | 53106139 | ID=cds.MS.gene49348.t1;Parent=MS.gene49348.t1 |
| chr1.1 | exon | 53106779 | 53106820 | 53106779 | ID=MS.gene49348.t1.exon10;Parent=MS.gene49348.t1 |
| chr1.1 | CDS | 53106779 | 53106820 | 53106779 | ID=cds.MS.gene49348.t1;Parent=MS.gene49348.t1 |
| Gene Sequence |
| Protein sequence |
