Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50734.t1 | XP_003607007.1 | 98 | 152 | 1 | 1 | 1 | 150 | 1 | 152 | 8.30E-72 | 279.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50734.t1 | Q1S053 | 98.0 | 152 | 1 | 1 | 1 | 150 | 1 | 152 | 2.0e-74 | 279.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50734.t1 | G7JIM1 | 98.0 | 152 | 1 | 1 | 1 | 150 | 1 | 152 | 6.0e-72 | 279.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049596 | MS.gene50734 | 0.820466 | 6.76E-53 | -1.69E-46 |
MS.gene04972 | MS.gene50734 | 0.827859 | 1.24E-54 | -1.69E-46 |
MS.gene04985 | MS.gene50734 | 0.814575 | 1.44E-51 | -1.69E-46 |
MS.gene049989 | MS.gene50734 | 0.835391 | 1.72E-56 | -1.69E-46 |
MS.gene050297 | MS.gene50734 | 0.864326 | 1.32E-64 | -1.69E-46 |
MS.gene050648 | MS.gene50734 | 0.80323 | 3.85E-49 | -1.69E-46 |
MS.gene05124 | MS.gene50734 | 0.806668 | 7.35E-50 | -1.69E-46 |
MS.gene051263 | MS.gene50734 | 0.83406 | 3.73E-56 | -1.69E-46 |
MS.gene051629 | MS.gene50734 | 0.830838 | 2.34E-55 | -1.69E-46 |
MS.gene052367 | MS.gene50734 | 0.84085 | 6.78E-58 | -1.69E-46 |
MS.gene053173 | MS.gene50734 | 0.81804 | 2.41E-52 | -1.69E-46 |
MS.gene053416 | MS.gene50734 | 0.845355 | 4.28E-59 | -1.69E-46 |
MS.gene053417 | MS.gene50734 | 0.843605 | 1.26E-58 | -1.69E-46 |
MS.gene054551 | MS.gene50734 | 0.824358 | 8.43E-54 | -1.69E-46 |
MS.gene054643 | MS.gene50734 | 0.823482 | 1.35E-53 | -1.69E-46 |
MS.gene054885 | MS.gene50734 | 0.802543 | 5.34E-49 | -1.69E-46 |
MS.gene055578 | MS.gene50734 | 0.802484 | 5.49E-49 | -1.69E-46 |
MS.gene055957 | MS.gene50734 | 0.868155 | 8.05E-66 | -1.69E-46 |
MS.gene056041 | MS.gene50734 | 0.845596 | 3.68E-59 | -1.69E-46 |
MS.gene05640 | MS.gene50734 | 0.835924 | 1.26E-56 | -1.69E-46 |
MS.gene057458 | MS.gene50734 | 0.814918 | 1.21E-51 | -1.69E-46 |
MS.gene058818 | MS.gene50734 | 0.848688 | 5.23E-60 | -1.69E-46 |
MS.gene058844 | MS.gene50734 | 0.83678 | 7.66E-57 | -1.69E-46 |
MS.gene059300 | MS.gene50734 | 0.820677 | 6.04E-53 | -1.69E-46 |
MS.gene059553 | MS.gene50734 | 0.817754 | 2.80E-52 | -1.69E-46 |
MS.gene060473 | MS.gene50734 | 0.830646 | 2.61E-55 | -1.69E-46 |
MS.gene060565 | MS.gene50734 | 0.819867 | 9.27E-53 | -1.69E-46 |
MS.gene06093 | MS.gene50734 | 0.813429 | 2.57E-51 | -1.69E-46 |
MS.gene061260 | MS.gene50734 | 0.851492 | 8.57E-61 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50734.t1 | MTR_4g071150 | 98.026 | 152 | 1 | 1 | 1 | 150 | 1 | 152 | 9.78e-101 | 285 |
MS.gene50734.t1 | MTR_2g096610 | 87.333 | 150 | 17 | 1 | 1 | 150 | 1 | 148 | 4.41e-83 | 241 |
MS.gene50734.t1 | MTR_4g064005 | 94.000 | 150 | 7 | 1 | 1 | 150 | 1 | 148 | 1.32e-82 | 239 |
MS.gene50734.t1 | MTR_4g063410 | 94.000 | 150 | 7 | 1 | 1 | 150 | 1 | 148 | 2.70e-82 | 239 |
MS.gene50734.t1 | MTR_2g096570 | 91.558 | 154 | 8 | 2 | 1 | 150 | 1 | 153 | 5.64e-82 | 238 |
MS.gene50734.t1 | MTR_4g063280 | 92.424 | 132 | 9 | 1 | 20 | 150 | 14 | 145 | 2.84e-81 | 236 |
MS.gene50734.t1 | MTR_4g064967 | 93.333 | 150 | 8 | 1 | 1 | 150 | 1 | 148 | 2.98e-80 | 234 |
MS.gene50734.t1 | MTR_8g086640 | 96.212 | 132 | 5 | 0 | 1 | 132 | 1 | 132 | 4.27e-75 | 221 |
MS.gene50734.t1 | MTR_7g113160 | 79.699 | 133 | 26 | 1 | 10 | 142 | 13 | 144 | 5.01e-71 | 210 |
MS.gene50734.t1 | MTR_7g108320 | 75.000 | 128 | 26 | 3 | 4 | 130 | 6 | 128 | 7.58e-60 | 182 |
MS.gene50734.t1 | MTR_7g114060 | 74.219 | 128 | 29 | 1 | 3 | 130 | 2 | 125 | 7.85e-60 | 182 |
MS.gene50734.t1 | MTR_7g114040 | 74.219 | 128 | 29 | 1 | 3 | 130 | 2 | 125 | 7.85e-60 | 182 |
MS.gene50734.t1 | MTR_7g093910 | 73.228 | 127 | 31 | 1 | 4 | 130 | 5 | 128 | 9.33e-60 | 181 |
MS.gene50734.t1 | MTR_2g082510 | 70.543 | 129 | 38 | 0 | 11 | 139 | 3 | 131 | 3.21e-59 | 180 |
MS.gene50734.t1 | MTR_2g082220 | 73.950 | 119 | 31 | 0 | 11 | 129 | 3 | 121 | 1.65e-57 | 176 |
MS.gene50734.t1 | MTR_6g005150 | 62.992 | 127 | 33 | 3 | 24 | 149 | 26 | 139 | 3.16e-47 | 150 |
MS.gene50734.t1 | MTR_4g063300 | 75.238 | 105 | 21 | 1 | 45 | 149 | 10 | 109 | 3.34e-46 | 146 |
MS.gene50734.t1 | MTR_7g114050 | 68.644 | 118 | 22 | 3 | 17 | 130 | 10 | 116 | 2.19e-45 | 145 |
MS.gene50734.t1 | MTR_1g011750 | 60.714 | 112 | 42 | 2 | 21 | 131 | 23 | 133 | 3.59e-36 | 121 |
MS.gene50734.t1 | MTR_1g011850 | 60.714 | 112 | 42 | 2 | 21 | 131 | 23 | 133 | 3.59e-36 | 121 |
MS.gene50734.t1 | MTR_1g114050 | 60.550 | 109 | 41 | 2 | 21 | 128 | 20 | 127 | 2.90e-35 | 119 |
MS.gene50734.t1 | MTR_1g071040 | 62.500 | 104 | 37 | 2 | 26 | 128 | 28 | 130 | 1.54e-34 | 117 |
MS.gene50734.t1 | MTR_1g069770 | 48.958 | 96 | 48 | 1 | 45 | 139 | 9 | 104 | 5.64e-25 | 92.4 |
MS.gene50734.t1 | MTR_4g048490 | 44.762 | 105 | 29 | 2 | 24 | 128 | 26 | 101 | 1.70e-16 | 70.9 |
MS.gene50734.t1 | MTR_7g010440 | 70.588 | 51 | 15 | 0 | 78 | 128 | 122 | 172 | 2.24e-16 | 74.3 |
MS.gene50734.t1 | MTR_4g005910 | 74.419 | 43 | 11 | 0 | 87 | 129 | 4 | 46 | 3.21e-16 | 68.6 |
MS.gene50734.t1 | MTR_7g027610 | 41.525 | 118 | 42 | 4 | 20 | 135 | 10 | 102 | 5.62e-15 | 67.0 |
MS.gene50734.t1 | MTR_0653s0030 | 54.545 | 55 | 25 | 0 | 55 | 109 | 43 | 97 | 4.58e-12 | 60.5 |
MS.gene50734.t1 | MTR_2g096590 | 70.000 | 40 | 12 | 0 | 110 | 149 | 12 | 51 | 5.34e-12 | 57.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50734.t1 | AT5G02560 | 79.739 | 153 | 28 | 1 | 1 | 150 | 1 | 153 | 1.48e-77 | 227 |
MS.gene50734.t1 | AT5G27670 | 76.316 | 152 | 32 | 3 | 1 | 150 | 1 | 150 | 3.32e-74 | 218 |
MS.gene50734.t1 | AT5G02560 | 68.927 | 177 | 28 | 2 | 1 | 150 | 1 | 177 | 1.06e-72 | 216 |
MS.gene50734.t1 | AT5G59870 | 75.000 | 148 | 36 | 1 | 4 | 150 | 3 | 150 | 8.98e-72 | 212 |
MS.gene50734.t1 | AT1G51060 | 76.667 | 120 | 28 | 0 | 11 | 130 | 3 | 122 | 9.15e-61 | 184 |
MS.gene50734.t1 | AT4G27230 | 71.538 | 130 | 32 | 1 | 11 | 140 | 3 | 127 | 1.43e-59 | 181 |
MS.gene50734.t1 | AT4G27230 | 71.538 | 130 | 32 | 1 | 11 | 140 | 3 | 127 | 1.43e-59 | 181 |
MS.gene50734.t1 | AT3G20670 | 75.630 | 119 | 29 | 0 | 11 | 129 | 3 | 121 | 4.77e-59 | 179 |
MS.gene50734.t1 | AT1G08880 | 71.654 | 127 | 33 | 1 | 7 | 130 | 2 | 128 | 3.47e-58 | 177 |
MS.gene50734.t1 | AT5G54640 | 74.790 | 119 | 30 | 0 | 11 | 129 | 3 | 121 | 4.51e-58 | 177 |
MS.gene50734.t1 | AT1G54690 | 72.868 | 129 | 29 | 3 | 3 | 130 | 5 | 128 | 1.19e-57 | 176 |
MS.gene50734.t1 | AT2G38810 | 60.714 | 112 | 42 | 2 | 21 | 131 | 25 | 135 | 6.97e-37 | 123 |
MS.gene50734.t1 | AT2G38810 | 60.714 | 112 | 42 | 2 | 21 | 131 | 25 | 135 | 6.97e-37 | 123 |
MS.gene50734.t1 | AT2G38810 | 60.714 | 112 | 42 | 2 | 21 | 131 | 25 | 135 | 6.97e-37 | 123 |
MS.gene50734.t1 | AT2G38810 | 60.714 | 112 | 42 | 2 | 21 | 131 | 25 | 135 | 6.97e-37 | 123 |
MS.gene50734.t1 | AT1G52740 | 62.857 | 105 | 37 | 2 | 25 | 128 | 27 | 130 | 6.18e-35 | 118 |
MS.gene50734.t1 | AT3G54560 | 60.185 | 108 | 41 | 2 | 25 | 131 | 29 | 135 | 1.25e-34 | 118 |
MS.gene50734.t1 | AT3G54560 | 60.185 | 108 | 41 | 2 | 25 | 131 | 29 | 135 | 1.25e-34 | 118 |
MS.gene50734.t1 | AT4G13570 | 48.913 | 92 | 45 | 2 | 32 | 122 | 28 | 118 | 1.97e-20 | 81.3 |
MS.gene50734.t1 | AT4G13570 | 48.352 | 91 | 45 | 2 | 33 | 122 | 35 | 124 | 5.65e-20 | 80.1 |
Find 56 sgRNAs with CRISPR-Local
Find 55 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAGACTTTCCAGCCTTCTT+TGG | 0.241789 | 4.3:+34135800 | None:intergenic |
AATCAGATCTAAGCCTTCTT+TGG | 0.242120 | 4.3:+34135779 | None:intergenic |
GTCTTCTTAGGCAACAGAAT+TGG | 0.279189 | 4.3:+34135851 | None:intergenic |
TTAGCCCTTTCAGTCTTCTT+AGG | 0.279305 | 4.3:+34135839 | None:intergenic |
CGATTCTTCCGACTGGGAAT+TGG | 0.285182 | 4.3:+34136119 | None:intergenic |
CATTCCAAGGCATTTGTTGC+TGG | 0.294047 | 4.3:-34135954 | MS.gene50734:CDS |
CTTGTCACCGACTTCTTCCT+TGG | 0.303917 | 4.3:+34136160 | None:intergenic |
GGCTCCCTTCTTTGTTGTCT+TGG | 0.304409 | 4.3:+34136204 | None:intergenic |
GAGCATATCGACCTTTCTTC+AGG | 0.357439 | 4.3:+34136089 | None:intergenic |
TGCTGCTGAGGTTCTTGAAT+TGG | 0.361111 | 4.3:-34136014 | MS.gene50734:CDS |
GAGCTTGGGAAGTTGCTTGC+TGG | 0.378028 | 4.3:-34135914 | MS.gene50734:CDS |
GGCATTTGTTGCTGGCTGTT+AGG | 0.378218 | 4.3:-34135946 | MS.gene50734:CDS |
TCTTCTTAGGCAACAGAATT+GGG | 0.399065 | 4.3:+34135852 | None:intergenic |
GAAGGGAGCCGGTGGAAGAA+AGG | 0.417242 | 4.3:-34136191 | MS.gene50734:CDS |
AAGGGAGCCGGTGGAAGAAA+GGG | 0.429527 | 4.3:-34136190 | MS.gene50734:CDS |
CAATTCCCAGTCGGAAGAAT+CGG | 0.431861 | 4.3:-34136118 | MS.gene50734:CDS |
AACAGAATTGGGTTAATGTT+CGG | 0.436254 | 4.3:+34135863 | None:intergenic |
AGAACTGCTGCTAGGTAAAC+CGG | 0.439504 | 4.3:+34136046 | None:intergenic |
ACCTCCTCCCTTTCTTCCAC+CGG | 0.471747 | 4.3:+34136183 | None:intergenic |
GCGTGTCGGCACCGGTGCTC+CGG | 0.486643 | 4.3:-34136065 | MS.gene50734:CDS |
GAATTGGAGACCGGCTCTGA+TGG | 0.486869 | 4.3:+34136135 | None:intergenic |
TATGCTCAGCGTGTCGGCAC+CGG | 0.489995 | 4.3:-34136073 | MS.gene50734:CDS |
TCTTGAATATCTTGCTGCTG+AGG | 0.496391 | 4.3:-34136026 | MS.gene50734:CDS |
AAGCACCAAGACAACAAAGA+AGG | 0.501816 | 4.3:-34136209 | MS.gene50734:CDS |
GTTAGGAATGATGAAGAGCT+TGG | 0.506747 | 4.3:-34135929 | MS.gene50734:CDS |
AGCAAGGAACCAAAGAAGGC+TGG | 0.510603 | 4.3:-34135809 | MS.gene50734:CDS |
GCTGAGGTTCTTGAATTGGC+AGG | 0.519701 | 4.3:-34136010 | MS.gene50734:CDS |
CTCGTGATAACAAGAAGAAT+AGG | 0.522113 | 4.3:-34135979 | MS.gene50734:CDS |
TTAGGAATGATGAAGAGCTT+GGG | 0.524474 | 4.3:-34135928 | MS.gene50734:CDS |
GGCTGGAAAGTCTCCAAAGA+AGG | 0.525629 | 4.3:-34135792 | MS.gene50734:CDS |
ACAGCCAGCAACAAATGCCT+TGG | 0.526781 | 4.3:+34135950 | None:intergenic |
TGCTAGGTAAACCGGAGCAC+CGG | 0.537567 | 4.3:+34136054 | None:intergenic |
ATCGGTCGATACCTGAAGAA+AGG | 0.548682 | 4.3:-34136100 | MS.gene50734:CDS |
TATCGACCGATTCTTCCGAC+TGG | 0.549955 | 4.3:+34136112 | None:intergenic |
TGGTAGCAAGGAACCAAAGA+AGG | 0.550474 | 4.3:-34135813 | MS.gene50734:CDS |
TGTTGCCTAAGAAGACTGAA+AGG | 0.556495 | 4.3:-34135844 | MS.gene50734:CDS |
AGCACCAAGACAACAAAGAA+GGG | 0.558080 | 4.3:-34136208 | MS.gene50734:CDS |
GAAGAAAGGGAGGAGGTCCA+AGG | 0.558674 | 4.3:-34136177 | MS.gene50734:CDS |
TCCGACTGGGAATTGGAGAC+CGG | 0.563841 | 4.3:+34136126 | None:intergenic |
AAGAACACCACCATGAGCTA+TGG | 0.573393 | 4.3:+34135886 | None:intergenic |
AAGACAACAAAGAAGGGAGC+CGG | 0.578427 | 4.3:-34136202 | MS.gene50734:CDS |
GATATTCAAGAACTGCTGCT+AGG | 0.583613 | 4.3:+34136038 | None:intergenic |
GCTGGTGTTACCATAGCTCA+TGG | 0.586669 | 4.3:-34135896 | MS.gene50734:CDS |
GTGACAAGATCCATCAGAGC+CGG | 0.589197 | 4.3:-34136145 | MS.gene50734:CDS |
GTTGCCTAAGAAGACTGAAA+GGG | 0.589268 | 4.3:-34135843 | MS.gene50734:CDS |
GCCGGTGGAAGAAAGGGAGG+AGG | 0.593863 | 4.3:-34136184 | MS.gene50734:CDS |
AAGGGCTAACACTGGTAGCA+AGG | 0.594830 | 4.3:-34135825 | MS.gene50734:CDS |
ACAACAAAGAAGGGAGCCGG+TGG | 0.595449 | 4.3:-34136199 | MS.gene50734:CDS |
GGAGCCGGTGGAAGAAAGGG+AGG | 0.604037 | 4.3:-34136187 | MS.gene50734:CDS |
GGTCGATATGCTCAGCGTGT+CGG | 0.611319 | 4.3:-34136079 | MS.gene50734:CDS |
ATCGACCGATTCTTCCGACT+GGG | 0.613102 | 4.3:+34136113 | None:intergenic |
AGGAGGTCCAAGGAAGAAGT+CGG | 0.620460 | 4.3:-34136167 | MS.gene50734:CDS |
GCCGGTCTCCAATTCCCAGT+CGG | 0.630576 | 4.3:-34136127 | MS.gene50734:CDS |
AGAAGAATAGGATCATTCCA+AGG | 0.652341 | 4.3:-34135967 | MS.gene50734:CDS |
AAGACTGAAAGGGCTAACAC+TGG | 0.665786 | 4.3:-34135833 | MS.gene50734:CDS |
GGTGTTACCATAGCTCATGG+TGG | 0.742529 | 4.3:-34135893 | MS.gene50734:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
AACAGAATTGGGTTAATGTT+CGG | + | chr4.3:34136144-34136163 | None:intergenic | 30.0% | |
AGAAGAATAGGATCATTCCA+AGG | - | chr4.3:34136037-34136056 | MS.gene50734:CDS | 35.0% | |
CTCGTGATAACAAGAAGAAT+AGG | - | chr4.3:34136025-34136044 | MS.gene50734:CDS | 35.0% | |
TCTTCTTAGGCAACAGAATT+GGG | + | chr4.3:34136155-34136174 | None:intergenic | 35.0% | |
TTAGGAATGATGAAGAGCTT+GGG | - | chr4.3:34136076-34136095 | MS.gene50734:CDS | 35.0% | |
AAGCACCAAGACAACAAAGA+AGG | - | chr4.3:34135795-34135814 | MS.gene50734:CDS | 40.0% | |
AGCACCAAGACAACAAAGAA+GGG | - | chr4.3:34135796-34135815 | MS.gene50734:CDS | 40.0% | |
GATATTCAAGAACTGCTGCT+AGG | + | chr4.3:34135969-34135988 | None:intergenic | 40.0% | |
GTCTTCTTAGGCAACAGAAT+TGG | + | chr4.3:34136156-34136175 | None:intergenic | 40.0% | |
GTTAGGAATGATGAAGAGCT+TGG | - | chr4.3:34136075-34136094 | MS.gene50734:CDS | 40.0% | |
GTTGCCTAAGAAGACTGAAA+GGG | - | chr4.3:34136161-34136180 | MS.gene50734:CDS | 40.0% | |
TCTTGAATATCTTGCTGCTG+AGG | - | chr4.3:34135978-34135997 | MS.gene50734:CDS | 40.0% | |
TGTTGCCTAAGAAGACTGAA+AGG | - | chr4.3:34136160-34136179 | MS.gene50734:CDS | 40.0% | |
TTAGCCCTTTCAGTCTTCTT+AGG | + | chr4.3:34136168-34136187 | None:intergenic | 40.0% | |
AAGAACACCACCATGAGCTA+TGG | + | chr4.3:34136121-34136140 | None:intergenic | 45.0% | |
AAGACAACAAAGAAGGGAGC+CGG | - | chr4.3:34135802-34135821 | MS.gene50734:CDS | 45.0% | |
AAGACTGAAAGGGCTAACAC+TGG | - | chr4.3:34136171-34136190 | MS.gene50734:CDS | 45.0% | |
AGAACTGCTGCTAGGTAAAC+CGG | + | chr4.3:34135961-34135980 | None:intergenic | 45.0% | |
ATCGGTCGATACCTGAAGAA+AGG | - | chr4.3:34135904-34135923 | MS.gene50734:CDS | 45.0% | |
CAATTCCCAGTCGGAAGAAT+CGG | - | chr4.3:34135886-34135905 | MS.gene50734:CDS | 45.0% | |
GAGCATATCGACCTTTCTTC+AGG | + | chr4.3:34135918-34135937 | None:intergenic | 45.0% | |
TGCTGCTGAGGTTCTTGAAT+TGG | - | chr4.3:34135990-34136009 | MS.gene50734:CDS | 45.0% | |
TGGTAGCAAGGAACCAAAGA+AGG | - | chr4.3:34136191-34136210 | MS.gene50734:CDS | 45.0% | |
! | CATTCCAAGGCATTTGTTGC+TGG | - | chr4.3:34136050-34136069 | MS.gene50734:CDS | 45.0% |
AAGGGCTAACACTGGTAGCA+AGG | - | chr4.3:34136179-34136198 | MS.gene50734:CDS | 50.0% | |
ACAGCCAGCAACAAATGCCT+TGG | + | chr4.3:34136057-34136076 | None:intergenic | 50.0% | |
AGCAAGGAACCAAAGAAGGC+TGG | - | chr4.3:34136195-34136214 | MS.gene50734:CDS | 50.0% | |
AGGAGGTCCAAGGAAGAAGT+CGG | - | chr4.3:34135837-34135856 | MS.gene50734:CDS | 50.0% | |
CGATTCTTCCGACTGGGAAT+TGG | + | chr4.3:34135888-34135907 | None:intergenic | 50.0% | |
GCTGAGGTTCTTGAATTGGC+AGG | - | chr4.3:34135994-34136013 | MS.gene50734:CDS | 50.0% | |
GGAGACTTTCCAGCCTTCTT+TGG | + | chr4.3:34136207-34136226 | None:intergenic | 50.0% | |
GGCTGGAAAGTCTCCAAAGA+AGG | - | chr4.3:34136212-34136231 | MS.gene50734:CDS | 50.0% | |
GTGACAAGATCCATCAGAGC+CGG | - | chr4.3:34135859-34135878 | MS.gene50734:CDS | 50.0% | |
! | ATCGACCGATTCTTCCGACT+GGG | + | chr4.3:34135894-34135913 | None:intergenic | 50.0% |
! | GGCATTTGTTGCTGGCTGTT+AGG | - | chr4.3:34136058-34136077 | MS.gene50734:CDS | 50.0% |
! | GGCTCCCTTCTTTGTTGTCT+TGG | + | chr4.3:34135803-34135822 | None:intergenic | 50.0% |
! | GGTGTTACCATAGCTCATGG+TGG | - | chr4.3:34136111-34136130 | MS.gene50734:CDS | 50.0% |
! | TATCGACCGATTCTTCCGAC+TGG | + | chr4.3:34135895-34135914 | None:intergenic | 50.0% |
!! | CTTGTCACCGACTTCTTCCT+TGG | + | chr4.3:34135847-34135866 | None:intergenic | 50.0% |
!! | GCTGGTGTTACCATAGCTCA+TGG | - | chr4.3:34136108-34136127 | MS.gene50734:CDS | 50.0% |
AAGGGAGCCGGTGGAAGAAA+GGG | - | chr4.3:34135814-34135833 | MS.gene50734:CDS | 55.0% | |
ACAACAAAGAAGGGAGCCGG+TGG | - | chr4.3:34135805-34135824 | MS.gene50734:CDS | 55.0% | |
ACCTCCTCCCTTTCTTCCAC+CGG | + | chr4.3:34135824-34135843 | None:intergenic | 55.0% | |
GAAGAAAGGGAGGAGGTCCA+AGG | - | chr4.3:34135827-34135846 | MS.gene50734:CDS | 55.0% | |
GAGCTTGGGAAGTTGCTTGC+TGG | - | chr4.3:34136090-34136109 | MS.gene50734:CDS | 55.0% | |
GGTCGATATGCTCAGCGTGT+CGG | - | chr4.3:34135925-34135944 | MS.gene50734:CDS | 55.0% | |
TCCGACTGGGAATTGGAGAC+CGG | + | chr4.3:34135881-34135900 | None:intergenic | 55.0% | |
TGCTAGGTAAACCGGAGCAC+CGG | + | chr4.3:34135953-34135972 | None:intergenic | 55.0% | |
! | GAATTGGAGACCGGCTCTGA+TGG | + | chr4.3:34135872-34135891 | None:intergenic | 55.0% |
GAAGGGAGCCGGTGGAAGAA+AGG | - | chr4.3:34135813-34135832 | MS.gene50734:CDS | 60.0% | |
GCCGGTCTCCAATTCCCAGT+CGG | - | chr4.3:34135877-34135896 | MS.gene50734:CDS | 60.0% | |
! | TATGCTCAGCGTGTCGGCAC+CGG | - | chr4.3:34135931-34135950 | MS.gene50734:CDS | 60.0% |
GCCGGTGGAAGAAAGGGAGG+AGG | - | chr4.3:34135820-34135839 | MS.gene50734:CDS | 65.0% | |
GGAGCCGGTGGAAGAAAGGG+AGG | - | chr4.3:34135817-34135836 | MS.gene50734:CDS | 65.0% | |
!! | GCGTGTCGGCACCGGTGCTC+CGG | - | chr4.3:34135939-34135958 | MS.gene50734:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 34135787 | 34136239 | 34135787 | ID=MS.gene50734 |
chr4.3 | mRNA | 34135787 | 34136239 | 34135787 | ID=MS.gene50734.t1;Parent=MS.gene50734 |
chr4.3 | exon | 34135787 | 34136239 | 34135787 | ID=MS.gene50734.t1.exon1;Parent=MS.gene50734.t1 |
chr4.3 | CDS | 34135787 | 34136239 | 34135787 | ID=cds.MS.gene50734.t1;Parent=MS.gene50734.t1 |
Gene Sequence |
Protein sequence |