AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63084

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63084.t1 MTR_8g062430 100.000 306 0 0 1 306 1 306 0.0 643
MS.gene63084.t1 MTR_5g037200 97.386 306 8 0 1 306 1 306 0.0 626
MS.gene63084.t1 MTR_8g085610 79.605 304 62 0 3 306 5 308 0.0 532
MS.gene63084.t1 MTR_7g107310 78.738 301 64 0 6 306 13 313 0.0 523
MS.gene63084.t1 MTR_8g085610 80.919 283 54 0 24 306 2 284 0.0 504
MS.gene63084.t1 MTR_5g093990 66.118 304 101 2 5 306 2 305 1.38e-153 432
MS.gene63084.t1 MTR_5g037200 96.774 186 6 0 1 186 1 186 9.64e-132 373
MS.gene63084.t1 MTR_1g039380 56.954 302 129 1 6 306 2 303 5.45e-129 369
MS.gene63084.t1 MTR_1g039380 59.206 277 112 1 31 306 3 279 9.50e-124 355
MS.gene63084.t1 MTR_1g079950 46.488 299 151 3 4 294 3 300 1.59e-97 290
MS.gene63084.t1 MTR_1g079950 46.488 299 151 3 4 294 3 300 2.26e-97 290
MS.gene63084.t1 MTR_1g079950 46.488 299 151 3 4 294 3 300 3.27e-97 290
MS.gene63084.t1 MTR_1g079950 46.488 299 151 3 4 294 32 329 3.81e-97 290
MS.gene63084.t1 MTR_7g112870 45.819 299 155 3 7 299 10 307 6.98e-96 286
MS.gene63084.t1 MTR_7g116380 45.819 299 153 3 4 294 3 300 2.21e-95 285
MS.gene63084.t1 MTR_7g116380 45.819 299 153 3 4 294 3 300 2.25e-95 285
MS.gene63084.t1 MTR_5g081230 45.763 295 153 3 6 294 24 317 4.38e-95 284
MS.gene63084.t1 MTR_8g098980 48.302 265 135 2 20 283 27 290 2.04e-93 280
MS.gene63084.t1 MTR_1g074880 48.175 274 140 2 20 292 26 298 7.38e-93 278
MS.gene63084.t1 MTR_1g074880 48.175 274 140 2 20 292 26 298 8.11e-93 278
MS.gene63084.t1 MTR_8g005010 44.138 290 153 3 7 288 4 292 4.84e-92 275
MS.gene63084.t1 MTR_1g043240 45.455 286 154 2 20 304 26 310 5.17e-92 276
MS.gene63084.t1 MTR_1g079950 48.617 253 125 3 54 302 34 285 3.59e-84 256
MS.gene63084.t1 MTR_1g074880 50.207 241 118 2 53 292 4 243 4.40e-83 252
MS.gene63084.t1 MTR_1g074880 50.207 241 118 2 53 292 4 243 4.45e-83 251
MS.gene63084.t1 MTR_4g050540 39.792 289 160 5 24 298 673 961 1.40e-60 208
MS.gene63084.t1 MTR_3g452710 42.857 245 134 5 50 290 222 464 5.84e-60 199
MS.gene63084.t1 MTR_2g100130 38.225 293 170 7 7 290 93 383 2.12e-59 195
MS.gene63084.t1 MTR_3g452710 42.857 245 134 5 50 290 289 531 3.42e-59 198
MS.gene63084.t1 MTR_2g087530 39.041 292 159 7 24 298 555 844 4.94e-59 202
MS.gene63084.t1 MTR_2g087530 39.041 292 159 7 24 298 668 957 1.13e-58 202
MS.gene63084.t1 MTR_1g089370 41.573 267 142 5 20 272 548 814 1.64e-58 201
MS.gene63084.t1 MTR_2g100130 38.225 293 170 7 7 290 163 453 1.90e-58 194
MS.gene63084.t1 MTR_2g100130 38.225 293 170 7 7 290 202 492 2.08e-58 195
MS.gene63084.t1 MTR_2g100130 38.225 293 170 7 7 290 192 482 2.16e-58 195
MS.gene63084.t1 MTR_2g100130 38.276 290 168 7 7 287 202 489 2.53e-57 192
MS.gene63084.t1 MTR_2g100130 38.276 290 167 8 7 287 202 488 5.59e-56 189
MS.gene63084.t1 MTR_2g100130 38.276 290 167 8 7 287 163 449 1.30e-55 187
MS.gene63084.t1 MTR_2g100130 40.000 265 149 6 7 263 202 464 7.97e-55 186
MS.gene63084.t1 MTR_2g100160 41.296 247 138 6 49 290 158 402 1.11e-53 181
MS.gene63084.t1 MTR_8g072600 32.414 290 141 11 26 262 107 394 6.54e-31 120
MS.gene63084.t1 MTR_8g072600 33.193 238 119 9 26 225 107 342 5.19e-27 108
MS.gene63084.t1 MTR_2g099710 30.847 295 130 12 17 262 203 472 3.45e-22 97.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63084.t1 AT1G10430 93.791 306 19 0 1 306 1 306 0.0 612
MS.gene63084.t1 AT1G10430 93.791 306 19 0 1 306 1 306 0.0 612
MS.gene63084.t1 AT1G59830 93.791 306 19 0 1 306 1 306 0.0 608
MS.gene63084.t1 AT1G69960 91.803 305 25 0 2 306 3 307 0.0 598
MS.gene63084.t1 AT2G42500 78.571 308 64 1 1 306 6 313 0.0 528
MS.gene63084.t1 AT3G58500 78.247 308 65 1 1 306 6 313 0.0 528
MS.gene63084.t1 AT1G59830 92.490 253 19 0 1 253 1 253 2.86e-178 493
MS.gene63084.t1 AT5G55260 66.118 304 101 2 5 306 2 305 1.39e-155 437
MS.gene63084.t1 AT4G26720 65.461 304 103 2 5 306 2 305 3.86e-155 436
MS.gene63084.t1 AT2G42500 67.532 308 51 2 1 306 6 266 4.82e-154 432
MS.gene63084.t1 AT5G55260 58.261 345 101 3 5 306 2 346 4.40e-147 417
MS.gene63084.t1 AT3G19980 56.291 302 131 1 6 306 2 303 9.08e-128 366
MS.gene63084.t1 AT1G50370 55.960 302 132 1 6 306 2 303 1.93e-127 365
MS.gene63084.t1 AT2G39840 47.458 295 148 3 6 294 21 314 1.84e-97 290
MS.gene63084.t1 AT2G29400 46.886 273 144 1 20 292 43 314 1.88e-96 287
MS.gene63084.t1 AT5G27840 47.297 296 149 3 1 290 8 302 1.41e-95 285
MS.gene63084.t1 AT5G27840 47.297 296 149 3 1 290 8 302 1.74e-95 285
MS.gene63084.t1 AT5G27840 47.297 296 149 3 1 290 8 302 1.74e-95 285
MS.gene63084.t1 AT5G27840 47.297 296 149 3 1 290 8 302 2.28e-95 285
MS.gene63084.t1 AT1G64040 49.811 265 131 2 20 283 27 290 9.95e-95 283
MS.gene63084.t1 AT3G05580 46.622 296 151 3 1 290 8 302 4.62e-94 281
MS.gene63084.t1 AT5G43380 47.719 285 140 4 7 283 6 289 1.79e-92 278
MS.gene63084.t1 AT5G43380 47.719 285 140 4 7 283 6 289 1.90e-92 278
MS.gene63084.t1 AT4G11240 47.547 265 137 2 20 283 27 290 2.45e-92 277
MS.gene63084.t1 AT5G43380 47.719 285 140 4 7 283 6 289 2.94e-92 277
MS.gene63084.t1 AT5G59160 45.985 274 146 2 20 292 36 308 1.37e-91 275
MS.gene63084.t1 AT5G59160 45.985 274 146 2 20 292 36 308 1.37e-91 275
MS.gene63084.t1 AT5G59160 45.985 274 146 2 20 292 36 308 1.37e-91 275
MS.gene63084.t1 AT3G46820 45.255 274 148 2 20 292 36 308 1.09e-89 270
MS.gene63084.t1 AT2G42500 72.619 168 41 2 1 163 6 173 3.95e-84 251
MS.gene63084.t1 AT2G42500 75.000 160 35 2 1 155 6 165 5.36e-83 248
MS.gene63084.t1 AT2G42500 70.857 175 44 3 1 170 6 178 8.54e-83 248
MS.gene63084.t1 AT3G05580 48.780 246 119 3 1 240 8 252 9.65e-81 245
MS.gene63084.t1 AT2G42810 42.910 268 143 6 31 290 201 466 2.55e-64 210
MS.gene63084.t1 AT2G42810 42.910 268 143 6 31 290 201 466 2.55e-64 210
MS.gene63084.t1 AT2G42810 42.910 268 143 6 31 290 201 466 2.55e-64 210
MS.gene63084.t1 AT2G42810 42.910 268 143 6 31 290 254 519 6.99e-64 210
MS.gene63084.t1 AT2G42810 42.910 268 143 6 31 290 255 520 8.91e-64 210
MS.gene63084.t1 AT1G03445 42.182 275 142 7 20 279 476 748 9.54e-62 209
MS.gene63084.t1 AT1G03445 42.182 275 142 7 20 279 476 748 1.04e-61 209
MS.gene63084.t1 AT4G03080 41.241 274 147 5 20 279 550 823 5.11e-61 208
MS.gene63084.t1 AT2G27210 39.655 290 160 6 24 298 679 968 2.56e-59 204
MS.gene63084.t1 AT2G27210 39.655 290 160 6 24 298 674 963 2.59e-59 204
MS.gene63084.t1 AT1G08420 40.741 270 146 5 24 279 690 959 6.78e-59 203
MS.gene63084.t1 AT1G08420 40.741 270 146 5 24 279 685 954 7.58e-59 203
MS.gene63084.t1 AT5G63870 33.225 307 138 12 49 291 79 382 6.82e-32 123
MS.gene63084.t1 AT5G63870 33.225 307 138 12 49 291 79 382 6.82e-32 123
MS.gene63084.t1 AT5G63870 37.674 215 93 8 49 225 79 290 1.34e-28 112
MS.gene63084.t1 AT1G48120 31.562 320 151 10 32 283 635 954 8.43e-26 108
MS.gene63084.t1 AT5G10900 27.044 318 175 13 27 293 198 509 2.82e-18 85.5
MS.gene63084.t1 AT5G10900 28.926 242 137 9 27 239 198 433 4.19e-18 85.1
MS.gene63084.t1 AT5G10900 28.926 242 137 9 27 239 198 433 4.36e-18 85.1

Find 97 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATACTAATTACCTCTTTA+TGG 0.084088 8.1:+42780607 MS.gene63084:CDS
CCACATCGGTAACAGTAATT+TGG 0.223140 8.1:-42784185 None:intergenic
CGTGGAGACTGTTTCACTTC+TGG 0.243845 8.1:+42782184 MS.gene63084:CDS
CGATCAAGCTAGGGCGATTC+TGG 0.253664 8.1:+42780475 MS.gene63084:CDS
ACTGGAAATTGGAGAAAATA+TGG 0.260651 8.1:+42784223 MS.gene63084:CDS
CATACTAATTACCTCTTTAT+GGG 0.311686 8.1:+42780608 MS.gene63084:CDS
CCATCAGGTGCTCGATTTGC+CGG 0.314120 8.1:-42780412 None:intergenic
ATGGCTGCCATACTGGAAAT+TGG 0.317792 8.1:+42784212 MS.gene63084:CDS
CGTGGTGCTGGATACACATT+TGG 0.338634 8.1:+42783939 MS.gene63084:CDS
GAGTAATTTGACGGCTTTCA+TGG 0.338735 8.1:-42782256 None:intergenic
CTGTTACCGATGTGGGAATA+TGG 0.351002 8.1:+42784193 MS.gene63084:CDS
GGCTCAATTTGCCTGGGTGC+TGG 0.354397 8.1:-42784269 None:intergenic
TACTGCCCTCATTGAGAGTC+AGG 0.370380 8.1:+42783286 MS.gene63084:CDS
TGGGAATATGGCTGCCATAC+TGG 0.390298 8.1:+42784205 MS.gene63084:CDS
CTTATTGAGTTGTTTCGTAT+TGG 0.399765 8.1:+42780572 MS.gene63084:CDS
TAGAGCTCACCAGCTTGTTA+TGG 0.402914 8.1:+42784013 MS.gene63084:CDS
ACTCAATAAGATCATAAAAC+TGG 0.409693 8.1:-42780559 None:intergenic
TGGAGGTCTCTCACCTTCAT+TGG 0.417060 8.1:+42783397 MS.gene63084:CDS
AGTGTCGGGCTCAATTTGCC+TGG 0.423275 8.1:-42784276 None:intergenic
CCTGATGATCGCTGTGGGTG+GGG 0.425400 8.1:+42783906 MS.gene63084:CDS
CCCCACCCACAGCGATCATC+AGG 0.426163 8.1:-42783906 None:intergenic
GATGAATGCTTGAGAAAATA+CGG 0.441753 8.1:+42783212 MS.gene63084:CDS
CATACACTTGAGTAATTTGA+CGG 0.445144 8.1:-42782265 None:intergenic
GGAATATCCCCACGTGGTGC+TGG 0.445251 8.1:+42783927 MS.gene63084:CDS
TGGAGTCTTGCGTGTAGTGT+CGG 0.445253 8.1:-42784291 None:intergenic
ATATCGCCGCAAACGGTGAC+AGG 0.447356 8.1:-42780530 None:intergenic
ATTGAGTTGTTTCGTATTGG+TGG 0.447736 8.1:+42780575 MS.gene63084:CDS
CTCTTTATGGGTGATTATGT+AGG 0.447757 8.1:+42780620 MS.gene63084:CDS
GCTGGTGAGCTCTAGATATG+AGG 0.452749 8.1:-42784004 None:intergenic
TTGTTATGGAAGGATACAAT+TGG 0.456190 8.1:+42784027 MS.gene63084:CDS
TCCTGATGATCGCTGTGGGT+GGG 0.465804 8.1:+42783905 MS.gene63084:CDS
AAGTGCCCTGTCACCGTTTG+CGG 0.468159 8.1:+42780524 MS.gene63084:CDS
ATCTCTGTAACGGACTTTCA+AGG 0.469042 8.1:-42782210 None:intergenic
TCAGAGGCTTGCACTCCATC+AGG 0.472802 8.1:-42780427 None:intergenic
TTCACCTCCGCTTCCGTCAG+AGG 0.478531 8.1:-42780443 None:intergenic
AATACGGAAATGCCAACGTC+TGG 0.480876 8.1:+42783228 MS.gene63084:CDS
TTGAGTTGTTTCGTATTGGT+GGG 0.488530 8.1:+42780576 MS.gene63084:CDS
GGAGTCTTGCGTGTAGTGTC+GGG 0.492442 8.1:-42784290 None:intergenic
ACCGTTTGCGGCGATATTCA+CGG 0.492974 8.1:+42780536 MS.gene63084:CDS
AGGCTCTTTGCGATCAAGCT+AGG 0.494140 8.1:+42780465 MS.gene63084:CDS
GCCGTGAATATCGCCGCAAA+CGG 0.504478 8.1:-42780537 None:intergenic
CTCTCAATGAGGGCAGTAAG+AGG 0.509482 8.1:-42783281 None:intergenic
TGACAGGGCACTTCACAGGC+TGG 0.514174 8.1:-42780514 None:intergenic
ATCCTGATGATCGCTGTGGG+TGG 0.515614 8.1:+42783904 MS.gene63084:CDS
CTACATAATCACCCATAAAG+AGG 0.526191 8.1:-42780619 None:intergenic
TCTGACGGAAGCGGAGGTGA+AGG 0.527508 8.1:+42780445 MS.gene63084:CDS
CGTCTCAAGCGGATCTAGAC+CGG 0.531102 8.1:+42780393 MS.gene63084:CDS
ACGGTGACAGGGCACTTCAC+AGG 0.531710 8.1:-42780518 None:intergenic
TGTTATGGAAGGATACAATT+GGG 0.532814 8.1:+42784028 MS.gene63084:CDS
CAAATTACTGTTACCGATGT+GGG 0.533275 8.1:+42784186 MS.gene63084:CDS
GTGCAAGCCTCTGACGGAAG+CGG 0.537103 8.1:+42780436 MS.gene63084:CDS
AGATATGAGGGAGAGGCCAT+TGG 0.538544 8.1:-42783991 None:intergenic
GGCTCTTTGCGATCAAGCTA+GGG 0.543574 8.1:+42780466 MS.gene63084:CDS
GTGGTGCTGGATACACATTT+GGG 0.547351 8.1:+42783940 MS.gene63084:CDS
ATAAAGAGGTAATTAGTATG+AGG 0.550822 8.1:-42780605 None:intergenic
CTCACCTTCATTGGATACAC+TGG 0.551568 8.1:+42783406 MS.gene63084:CDS
ACTGGATAACATCAGAGCAT+TGG 0.553616 8.1:+42783424 MS.gene63084:CDS
GATGGAGTGCAAGCCTCTGA+CGG 0.557849 8.1:+42780430 MS.gene63084:CDS
TGCTGGATACACATTTGGGC+AGG 0.558690 8.1:+42783944 MS.gene63084:CDS
TTCAATTTGATCCAGCACCC+AGG 0.565144 8.1:+42784258 MS.gene63084:CDS
TTATCCAGTGTATCCAATGA+AGG 0.566154 8.1:-42783410 None:intergenic
GGAGACTGTTTCACTTCTGG+TGG 0.567017 8.1:+42782187 MS.gene63084:CDS
GGAAGGATACAATTGGGCTC+AGG 0.571725 8.1:+42784034 MS.gene63084:CDS
CTGGTGAGCTCTAGATATGA+GGG 0.574822 8.1:-42784003 None:intergenic
CCAAATTACTGTTACCGATG+TGG 0.577639 8.1:+42784185 MS.gene63084:CDS
GTGTCGGGCTCAATTTGCCT+GGG 0.578249 8.1:-42784275 None:intergenic
TGTATCCTTCCATAACAAGC+TGG 0.579948 8.1:-42784022 None:intergenic
TTGTAATTCTATCTCTGTAA+CGG 0.581751 8.1:-42782220 None:intergenic
CCGGCAAATCGAGCACCTGA+TGG 0.583477 8.1:+42780412 MS.gene63084:CDS
AGCATTGGATCGTATTCAAG+AGG 0.590091 8.1:+42783439 MS.gene63084:CDS
TGGATCGATGCCGTCTCAAG+CGG 0.594661 8.1:+42780382 None:intergenic
CGGATCCTGATGATCGCTGT+GGG 0.595343 8.1:+42783901 MS.gene63084:CDS
GAGCTCTAGATATGAGGGAG+AGG 0.596342 8.1:-42783998 None:intergenic
CAAGCCTCTGACGGAAGCGG+AGG 0.596393 8.1:+42780439 MS.gene63084:CDS
GGGCGATTCTGGTTGAAGAG+TGG 0.600636 8.1:+42780486 MS.gene63084:CDS
CGGTCTAGATCCGCTTGAGA+CGG 0.604182 8.1:-42780392 None:intergenic
TCTCAGTTCAATCATACCAA+TGG 0.609973 8.1:+42783975 MS.gene63084:CDS
GGTAAAGAATTTCCAGACGT+TGG 0.612776 8.1:-42783240 None:intergenic
GCTCACCAGCTTGTTATGGA+AGG 0.615138 8.1:+42784017 MS.gene63084:CDS
TCACACATTGGTCCTTCGTG+TGG 0.618298 8.1:-42783867 None:intergenic
TCGAACCTGACTCTCAATGA+GGG 0.619866 8.1:-42783291 None:intergenic
GACCAATGTGTGATCTCTTG+TGG 0.621435 8.1:+42783877 MS.gene63084:CDS
CTCGAACCTGACTCTCAATG+AGG 0.628770 8.1:-42783292 None:intergenic
TGTGTATCCAGCACCACGTG+GGG 0.629248 8.1:-42783934 None:intergenic
TATCGCCGCAAACGGTGACA+GGG 0.634451 8.1:-42780529 None:intergenic
CAGAAGTGAAACAGTCTCCA+CGG 0.636967 8.1:-42782183 None:intergenic
AATGTGTGATCTCTTGTGGT+CGG 0.643842 8.1:+42783881 MS.gene63084:CDS
AGGTAAATAATCAAACAAGT+CGG 0.653175 8.1:-42783261 None:intergenic
TCGGATCCTGATGATCGCTG+TGG 0.656549 8.1:+42783900 MS.gene63084:CDS
ATGTGTATCCAGCACCACGT+GGG 0.665979 8.1:-42783935 None:intergenic
ACATTATAGGTTCCACACGA+AGG 0.678528 8.1:+42783855 MS.gene63084:intron
AGATCGTGGATACTATTCCG+TGG 0.679125 8.1:+42782166 MS.gene63084:intron
AATGTGTATCCAGCACCACG+TGG 0.679832 8.1:-42783936 None:intergenic
TGGCAGCCATATTCCCACAT+CGG 0.682984 8.1:-42784199 None:intergenic
GATAGAATTACAATTCTCAG+AGG 0.691020 8.1:+42782230 MS.gene63084:CDS
GACCACAAGAGATCACACAT+TGG 0.740012 8.1:-42783879 None:intergenic
GGGTGGGGAATATCCCCACG+TGG 0.745078 8.1:+42783921 MS.gene63084:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTAAACAATATTTATTAAA+AGG + chr8.1:42782681-42782700 MS.gene63084:intron 10.0%
!!! TTTTTATTTTGTGATTTTTT+TGG + chr8.1:42780648-42780667 MS.gene63084:intron 10.0%
!! ATAAAAAATATTTGCCTATT+AGG - chr8.1:42781767-42781786 None:intergenic 15.0%
!! ATAAATGTTGGTATATAATA+CGG + chr8.1:42780953-42780972 MS.gene63084:intron 15.0%
!! ATTTCAAATCTTTGATTAAT+TGG - chr8.1:42783051-42783070 None:intergenic 15.0%
!!! GATATAGTTTTGTTTAAATA+AGG - chr8.1:42781330-42781349 None:intergenic 15.0%
!!! TAATAGGCAAATATTTTTTA+TGG + chr8.1:42781766-42781785 MS.gene63084:intron 15.0%
!!! TATTTTTCTTTAAAATCTGA+GGG + chr8.1:42781377-42781396 MS.gene63084:intron 15.0%
!!! TTATTTTCTTAAATTAGCAT+AGG - chr8.1:42780867-42780886 None:intergenic 15.0%
!!! TTTATGTTGATAACTATTTT+AGG + chr8.1:42784133-42784152 MS.gene63084:intron 15.0%
!! AGAATATAGTATATATCAGT+AGG + chr8.1:42781105-42781124 MS.gene63084:intron 20.0%
!! ATGCAGATAGAAATATTATA+GGG + chr8.1:42782571-42782590 MS.gene63084:intron 20.0%
!! ATTGAAATTGAAGTTGAATT+TGG + chr8.1:42780736-42780755 MS.gene63084:intron 20.0%
!! CTTAATCAATACATATATGT+GGG + chr8.1:42781544-42781563 MS.gene63084:intron 20.0%
!! CTTCATATATATTGTTTAAC+AGG - chr8.1:42782716-42782735 None:intergenic 20.0%
!! TTAATCAATACATATATGTG+GGG + chr8.1:42781545-42781564 MS.gene63084:intron 20.0%
!!! AATAAACATTTTGTTTCTAG+TGG - chr8.1:42783101-42783120 None:intergenic 20.0%
!!! AATTTTTGTTGGTTTAATTG+AGG + chr8.1:42783599-42783618 MS.gene63084:intron 20.0%
!!! AGATTAATGTGTTATTAGTT+TGG + chr8.1:42781862-42781881 MS.gene63084:intron 20.0%
!!! ATCATACTCTTTAAAAATGT+GGG - chr8.1:42781992-42782011 None:intergenic 20.0%
!!! ATTTTTGTTGGTTTAATTGA+GGG + chr8.1:42783600-42783619 MS.gene63084:intron 20.0%
!!! GTATTTTTCTTTAAAATCTG+AGG + chr8.1:42781376-42781395 MS.gene63084:intron 20.0%
!!! TATCATACTCTTTAAAAATG+TGG - chr8.1:42781993-42782012 None:intergenic 20.0%
!!! TATTTCTGTTTTTACCTAAT+AGG + chr8.1:42781750-42781769 MS.gene63084:intron 20.0%
!!! TTTTTTTTCCAAATTTGTCA+AGG + chr8.1:42781175-42781194 MS.gene63084:intron 20.0%
! AAATGTTGAGACATAAATGT+TGG + chr8.1:42780941-42780960 MS.gene63084:intron 25.0%
! AATTCTATAGTGCTTATAAG+AGG + chr8.1:42781252-42781271 MS.gene63084:intron 25.0%
! AATTTGATACTTGGAACATT+TGG + chr8.1:42780712-42780731 MS.gene63084:intron 25.0%
! ACAAAATAATCACAACCATA+AGG - chr8.1:42781006-42781025 None:intergenic 25.0%
! ACTCAATAAGATCATAAAAC+TGG - chr8.1:42780562-42780581 None:intergenic 25.0%
! AGGTAAATAATCAAACAAGT+CGG - chr8.1:42783264-42783283 None:intergenic 25.0%
! ATAAAGAGGTAATTAGTATG+AGG - chr8.1:42780608-42780627 None:intergenic 25.0%
! ATCATGAGAATGAAAAATGA+TGG - chr8.1:42782460-42782479 None:intergenic 25.0%
! ATGAAATTGAAAAGTTACGA+GGG + chr8.1:42781072-42781091 MS.gene63084:intron 25.0%
! ATTGGGTAAGGAAAATAATT+GGG - chr8.1:42782348-42782367 None:intergenic 25.0%
! CAACTGTAATTGTACATTAT+AGG + chr8.1:42783842-42783861 MS.gene63084:intron 25.0%
! CATACTAATTACCTCTTTAT+GGG + chr8.1:42780608-42780627 MS.gene63084:CDS 25.0%
! CTTATAAGCACTATAGAATT+TGG - chr8.1:42781252-42781271 None:intergenic 25.0%
! GATGCAGATAGAAATATTAT+AGG + chr8.1:42782570-42782589 MS.gene63084:intron 25.0%
! GCTTAATCAATACATATATG+TGG + chr8.1:42781543-42781562 MS.gene63084:intron 25.0%
! TATGAAATTGAAAAGTTACG+AGG + chr8.1:42781071-42781090 MS.gene63084:intron 25.0%
! TATTGGGTAAGGAAAATAAT+TGG - chr8.1:42782349-42782368 None:intergenic 25.0%
! TCATACTAATTACCTCTTTA+TGG + chr8.1:42780607-42780626 MS.gene63084:CDS 25.0%
! TCCAAGTATCAAATTCAAAT+TGG - chr8.1:42780707-42780726 None:intergenic 25.0%
! TCCAATTTGAATTTGATACT+TGG + chr8.1:42780703-42780722 MS.gene63084:intron 25.0%
! TTCACAACTTAAACATAAGA+CGG - chr8.1:42783560-42783579 None:intergenic 25.0%
! TTGTAATTCTATCTCTGTAA+CGG - chr8.1:42782223-42782242 None:intergenic 25.0%
!! TCATACTCTTTAAAAATGTG+GGG - chr8.1:42781991-42782010 None:intergenic 25.0%
!! TTTGATGTTGCAATTTTTGT+TGG + chr8.1:42783588-42783607 MS.gene63084:intron 25.0%
!!! ATTAATGAAGCATTGTCATA+AGG - chr8.1:42782140-42782159 None:intergenic 25.0%
!!! ATTTTCTTAGGCTTTTAAGA+TGG + chr8.1:42783696-42783715 MS.gene63084:intron 25.0%
!!! GGATGAGATATTTAGTTTTA+GGG + chr8.1:42782485-42782504 MS.gene63084:intron 25.0%
!!! TGGATGAGATATTTAGTTTT+AGG + chr8.1:42782484-42782503 MS.gene63084:intron 25.0%
!!! TTGTTGTTTTAATATGCTGT+AGG + chr8.1:42780793-42780812 MS.gene63084:intron 25.0%
!!! TTTATTTGTTGAAGTGTTGA+TGG + chr8.1:42781045-42781064 MS.gene63084:intron 25.0%
!!! TTTTTGGTATGAATTTTCTG+TGG + chr8.1:42780664-42780683 MS.gene63084:intron 25.0%
AATACGTTCCTTGACAAATT+TGG - chr8.1:42781186-42781205 None:intergenic 30.0%
AATCGTATCATTCTTGGTAT+GGG + chr8.1:42782914-42782933 MS.gene63084:intron 30.0%
ACTGACAATTGAACTCTATT+GGG - chr8.1:42782365-42782384 None:intergenic 30.0%
ACTGGAAATTGGAGAAAATA+TGG + chr8.1:42784223-42784242 MS.gene63084:CDS 30.0%
ATATGAAGCATGTAACTGAT+AGG + chr8.1:42782728-42782747 MS.gene63084:intron 30.0%
ATCCATAGGTTAGTAATGAA+GGG + chr8.1:42782394-42782413 MS.gene63084:intron 30.0%
ATGATGCACAAATATGATAC+TGG - chr8.1:42782016-42782035 None:intergenic 30.0%
ATTACTAACCTATGGATAGA+CGG - chr8.1:42782391-42782410 None:intergenic 30.0%
CAGAAAACCTGAAATATATC+AGG - chr8.1:42783371-42783390 None:intergenic 30.0%
CATACACTTGAGTAATTTGA+CGG - chr8.1:42782268-42782287 None:intergenic 30.0%
CTAACTTCCTGATATATTTC+AGG + chr8.1:42783361-42783380 MS.gene63084:intron 30.0%
GAAAAATAAGAGAATCACAG+AGG + chr8.1:42782783-42782802 MS.gene63084:intron 30.0%
GAAATATATCAGGAAGTTAG+AGG - chr8.1:42783361-42783380 None:intergenic 30.0%
GAATGAGTAGTAAAATTCCT+TGG + chr8.1:42782600-42782619 MS.gene63084:intron 30.0%
GAGACAAAATATGAGATTTG+TGG - chr8.1:42781681-42781700 None:intergenic 30.0%
GATAGAATTACAATTCTCAG+AGG + chr8.1:42782230-42782249 MS.gene63084:CDS 30.0%
GATGAATGCTTGAGAAAATA+CGG + chr8.1:42783212-42783231 MS.gene63084:CDS 30.0%
GTATATAATACGGAGTAGTA+TGG + chr8.1:42780963-42780982 MS.gene63084:intron 30.0%
GTATCTAATACCAATGTGTT+TGG + chr8.1:42781518-42781537 MS.gene63084:intron 30.0%
GTTGATATTAACATGCAACA+TGG + chr8.1:42782622-42782641 MS.gene63084:intron 30.0%
TAAACTAGAGAGAAACCTTA+TGG + chr8.1:42780988-42781007 MS.gene63084:intron 30.0%
TAGAAATATTATAGGGTGTG+AGG + chr8.1:42782578-42782597 MS.gene63084:intron 30.0%
TATCCATAGGTTAGTAATGA+AGG + chr8.1:42782393-42782412 MS.gene63084:intron 30.0%
TCATTAATTCATACAGATCG+TGG + chr8.1:42782152-42782171 MS.gene63084:intron 30.0%
TGAAATTGAAAAGTTACGAG+GGG + chr8.1:42781073-42781092 MS.gene63084:intron 30.0%
TGATATTGACAGAGAACATA+AGG - chr8.1:42781643-42781662 None:intergenic 30.0%
TGTTATGGAAGGATACAATT+GGG + chr8.1:42784028-42784047 MS.gene63084:CDS 30.0%
TTCAACAAATAAAGCTTTGC+TGG - chr8.1:42781038-42781057 None:intergenic 30.0%
TTGCATGTTAATATCAACCA+AGG - chr8.1:42782620-42782639 None:intergenic 30.0%
TTGGGTAAGGAAAATAATTG+GGG - chr8.1:42782347-42782366 None:intergenic 30.0%
TTGTTATGGAAGGATACAAT+TGG + chr8.1:42784027-42784046 MS.gene63084:CDS 30.0%
TTTGAATACTTAACTGTCAC+TGG + chr8.1:42781604-42781623 MS.gene63084:intron 30.0%
TTTGTTGGGATGTTAGTATT+GGG + chr8.1:42781492-42781511 MS.gene63084:intron 30.0%
! AAAGTCAAGTTTTGCACTTT+TGG - chr8.1:42781474-42781493 None:intergenic 30.0%
! ATTTTCTCCAATTTCCAGTA+TGG - chr8.1:42784222-42784241 None:intergenic 30.0%
! CTTATTGAGTTGTTTCGTAT+TGG + chr8.1:42780572-42780591 MS.gene63084:CDS 30.0%
! TGCAAAACTTGACTTTTGTT+GGG + chr8.1:42781478-42781497 MS.gene63084:intron 30.0%
! TGGTTAGTTAGAAGACTTTA+AGG + chr8.1:42782849-42782868 MS.gene63084:intron 30.0%
! TTAGTTAGAAGACTTTAAGG+TGG + chr8.1:42782852-42782871 MS.gene63084:intron 30.0%
! TTTGAAACTGAGGTATATCA+AGG + chr8.1:42781219-42781238 MS.gene63084:intron 30.0%
! TTTTCATTCTCATGATCATG+TGG + chr8.1:42782464-42782483 MS.gene63084:intron 30.0%
! TTTTGTTGGGATGTTAGTAT+TGG + chr8.1:42781491-42781510 MS.gene63084:intron 30.0%
!! AAGACTTTAAGGTGGTTATA+AGG + chr8.1:42782860-42782879 MS.gene63084:intron 30.0%
!! TCTTTTGACTAATTGTATGC+CGG + chr8.1:42783335-42783354 MS.gene63084:intron 30.0%
!! TTTCTTTAAAATCTGAGGGA+AGG + chr8.1:42781381-42781400 MS.gene63084:intron 30.0%
!!! GTGAAACAATTTGGTTTTGT+GGG + chr8.1:42782422-42782441 MS.gene63084:intron 30.0%
!!! TCTCTTATTTTTCCTAACAC+AGG - chr8.1:42782776-42782795 None:intergenic 30.0%
!!! TTTTAAGATGGCTCATCTTT+TGG + chr8.1:42783708-42783727 MS.gene63084:intron 30.0%
AAACTGAGGTATATCAAGGT+TGG + chr8.1:42781223-42781242 MS.gene63084:intron 35.0%
AACCCTTCATTACTAACCTA+TGG - chr8.1:42782399-42782418 None:intergenic 35.0%
AAGTCCTTAGATATAGCAAC+AGG - chr8.1:42784115-42784134 None:intergenic 35.0%
AATTCCTCTGTCAATAACAG+TGG + chr8.1:42782943-42782962 MS.gene63084:intron 35.0%
ACGATGTTAACTGAATTGCT+TGG + chr8.1:42783794-42783813 MS.gene63084:intron 35.0%
ACTTGGAGTGCATGTTTAAA+AGG + chr8.1:42782648-42782667 MS.gene63084:intron 35.0%
AGGGTTTAGGTGAAACAATT+TGG + chr8.1:42782413-42782432 MS.gene63084:intron 35.0%
AGGTTAGTAATGAAGGGTTT+AGG + chr8.1:42782400-42782419 MS.gene63084:intron 35.0%
ATCGTATCATTCTTGGTATG+GGG + chr8.1:42782915-42782934 MS.gene63084:intron 35.0%
ATTACAGTTGTTAGCATACC+TGG - chr8.1:42783832-42783851 None:intergenic 35.0%
CAAATTACTGTTACCGATGT+GGG + chr8.1:42784186-42784205 MS.gene63084:CDS 35.0%
CAATCGTATCATTCTTGGTA+TGG + chr8.1:42782913-42782932 MS.gene63084:intron 35.0%
CAATTGAACTCTATTGGGTA+AGG - chr8.1:42782360-42782379 None:intergenic 35.0%
CACTGACAATTGAACTCTAT+TGG - chr8.1:42782366-42782385 None:intergenic 35.0%
CTACATAATCACCCATAAAG+AGG - chr8.1:42780622-42780641 None:intergenic 35.0%
CTCTTTATGGGTGATTATGT+AGG + chr8.1:42780620-42780639 MS.gene63084:CDS 35.0%
CTTGGAGTGCATGTTTAAAA+GGG + chr8.1:42782649-42782668 MS.gene63084:intron 35.0%
CTTTGCAATCGTATCATTCT+TGG + chr8.1:42782908-42782927 MS.gene63084:intron 35.0%
GATTAAGCAACCAAACACAT+TGG - chr8.1:42781531-42781550 None:intergenic 35.0%
GTATATATCAGTAGGACTCT+AGG + chr8.1:42781113-42781132 MS.gene63084:intron 35.0%
GTTAAGTATTCAAACCACAG+CGG - chr8.1:42781598-42781617 None:intergenic 35.0%
TAACAAACAGCATTCCACTA+AGG - chr8.1:42783735-42783754 None:intergenic 35.0%
TATACAGAAGATGCTCAAAG+AGG + chr8.1:42781704-42781723 MS.gene63084:intron 35.0%
TATTCTGATGCAGTTTCTAC+CGG + chr8.1:42782989-42783008 MS.gene63084:intron 35.0%
TCTCAGTTCAATCATACCAA+TGG + chr8.1:42783975-42783994 MS.gene63084:CDS 35.0%
TTACAGTTGTTAGCATACCT+GGG - chr8.1:42783831-42783850 None:intergenic 35.0%
TTATCCAGTGTATCCAATGA+AGG - chr8.1:42783413-42783432 None:intergenic 35.0%
TTGAACGTAATCATGTGTGT+TGG + chr8.1:42780892-42780911 MS.gene63084:intron 35.0%
! ATATTTCTATCTGCATCCTC+AGG - chr8.1:42782567-42782586 None:intergenic 35.0%
! ATCCTTGCTGCAATTTTCTT+AGG + chr8.1:42783684-42783703 MS.gene63084:intron 35.0%
! ATTGAGTTGTTTCGTATTGG+TGG + chr8.1:42780575-42780594 MS.gene63084:CDS 35.0%
! CTGTTTGAAGTTTGAAACTG+AGG + chr8.1:42781209-42781228 MS.gene63084:intron 35.0%
! GTGCAAAACTTGACTTTTGT+TGG + chr8.1:42781477-42781496 MS.gene63084:intron 35.0%
! TTGAGTTGTTTCGTATTGGT+GGG + chr8.1:42780576-42780595 MS.gene63084:CDS 35.0%
!! ACTATTTTAGGAGAAGAACG+TGG + chr8.1:42784145-42784164 MS.gene63084:intron 35.0%
!!! GGTGAAACAATTTGGTTTTG+TGG + chr8.1:42782421-42782440 MS.gene63084:intron 35.0%
AACATGCAACATGGATCACT+TGG + chr8.1:42782631-42782650 MS.gene63084:intron 40.0%
AATGTGTGATCTCTTGTGGT+CGG + chr8.1:42783881-42783900 MS.gene63084:CDS 40.0%
ACATTATAGGTTCCACACGA+AGG + chr8.1:42783855-42783874 MS.gene63084:intron 40.0%
ACCTCCTGTTGCTATATCTA+AGG + chr8.1:42784108-42784127 MS.gene63084:intron 40.0%
ACTGGATAACATCAGAGCAT+TGG + chr8.1:42783424-42783443 MS.gene63084:CDS 40.0%
AGCCTAAGAAAATTGCAGCA+AGG - chr8.1:42783689-42783708 None:intergenic 40.0%
CCAAATTACTGTTACCGATG+TGG + chr8.1:42784185-42784204 MS.gene63084:CDS 40.0%
CCACATCGGTAACAGTAATT+TGG - chr8.1:42784188-42784207 None:intergenic 40.0%
CTAACTAACCAACAGCTGTT+AGG - chr8.1:42782840-42782859 None:intergenic 40.0%
GAAGAGCTGAAATTGAGTGA+AGG - chr8.1:42782043-42782062 None:intergenic 40.0%
GAGAAATATGTTCCTGCTGA+AGG - chr8.1:42783627-42783646 None:intergenic 40.0%
GAGTAATTTGACGGCTTTCA+TGG - chr8.1:42782259-42782278 None:intergenic 40.0%
GGTAAAGAATTTCCAGACGT+TGG - chr8.1:42783243-42783262 None:intergenic 40.0%
GTGTCAAGTGTCTTTGTCAA+TGG - chr8.1:42780826-42780845 None:intergenic 40.0%
TATATCAGGAAGTTAGAGGC+CGG - chr8.1:42783357-42783376 None:intergenic 40.0%
TCCTTAGATATAGCAACAGG+AGG - chr8.1:42784112-42784131 None:intergenic 40.0%
TCGTATCATTCTTGGTATGG+GGG + chr8.1:42782916-42782935 MS.gene63084:intron 40.0%
TGTATCCTTCCATAACAAGC+TGG - chr8.1:42784025-42784044 None:intergenic 40.0%
TGTCATAAGGAAATTGCAGC+AGG - chr8.1:42782127-42782146 None:intergenic 40.0%
! AGCATTGGATCGTATTCAAG+AGG + chr8.1:42783439-42783458 MS.gene63084:CDS 40.0%
! TTTAGTTGTCTTTTCCGCTG+TGG + chr8.1:42781581-42781600 MS.gene63084:intron 40.0%
!! AACAGGAGGTATTACTCAAG+AGG - chr8.1:42784098-42784117 None:intergenic 40.0%
!! ACAGGAGGTATTACTCAAGA+GGG - chr8.1:42784097-42784116 None:intergenic 40.0%
!! ATCTCTGTAACGGACTTTCA+AGG - chr8.1:42782213-42782232 None:intergenic 40.0%
!!! ACAATTTGGTTTTGTGGGAC+TGG + chr8.1:42782427-42782446 MS.gene63084:intron 40.0%
!!! TTTCAGGTTTTCTGCTTGCA+TGG + chr8.1:42783377-42783396 MS.gene63084:intron 40.0%
AAAATGCCAGCACATCGTGT+TGG - chr8.1:42782317-42782336 None:intergenic 45.0%
AACCAACAGCTGTTAGGTAC+CGG - chr8.1:42782834-42782853 None:intergenic 45.0%
AATACGGAAATGCCAACGTC+TGG + chr8.1:42783228-42783247 MS.gene63084:CDS 45.0%
AGATCGTGGATACTATTCCG+TGG + chr8.1:42782166-42782185 MS.gene63084:intron 45.0%
AGTGAAGCTCTGTGATGTCA+CGG + chr8.1:42781136-42781155 MS.gene63084:intron 45.0%
ATGGCTGCCATACTGGAAAT+TGG + chr8.1:42784212-42784231 MS.gene63084:CDS 45.0%
CAGAAGTGAAACAGTCTCCA+CGG - chr8.1:42782186-42782205 None:intergenic 45.0%
CCATACCTGAAAGCAGAAGA+TGG - chr8.1:42783185-42783204 None:intergenic 45.0%
CTCACCTTCATTGGATACAC+TGG + chr8.1:42783406-42783425 MS.gene63084:CDS 45.0%
CTGAAAGCAGAAGATGGAGA+AGG - chr8.1:42783179-42783198 None:intergenic 45.0%
CTGTTACCGATGTGGGAATA+TGG + chr8.1:42784193-42784212 MS.gene63084:CDS 45.0%
CTTCTCCATCTTCTGCTTTC+AGG + chr8.1:42783177-42783196 MS.gene63084:intron 45.0%
GACCAATGTGTGATCTCTTG+TGG + chr8.1:42783877-42783896 MS.gene63084:CDS 45.0%
GACCACAAGAGATCACACAT+TGG - chr8.1:42783882-42783901 None:intergenic 45.0%
GAGACCACTGTTATTGACAG+AGG - chr8.1:42782950-42782969 None:intergenic 45.0%
GGAGAAGGCTTTCGATGAAA+TGG - chr8.1:42783164-42783183 None:intergenic 45.0%
TCAGTGAACCGTCTATCCAT+AGG + chr8.1:42782380-42782399 MS.gene63084:intron 45.0%
TCGAACCTGACTCTCAATGA+GGG - chr8.1:42783294-42783313 None:intergenic 45.0%
TGATGCAGTTTCTACCGGTA+AGG + chr8.1:42782994-42783013 MS.gene63084:intron 45.0%
TTAATTGAGGGACCTTCAGC+AGG + chr8.1:42783612-42783631 MS.gene63084:intron 45.0%
TTCAATTTGATCCAGCACCC+AGG + chr8.1:42784258-42784277 MS.gene63084:CDS 45.0%
! AAGGAGAGTGAGAGCATATC+AGG + chr8.1:42782879-42782898 MS.gene63084:intron 45.0%
! ACCTTCCGAGTGATAATGAC+CGG + chr8.1:42782812-42782831 MS.gene63084:intron 45.0%
! CATGTGTGTTGGTGTAGAGT+GGG + chr8.1:42780903-42780922 MS.gene63084:intron 45.0%
! CCATCTTCTGCTTTCAGGTA+TGG + chr8.1:42783182-42783201 MS.gene63084:intron 45.0%
! GCTCATCTTTTGGTCCTTAG+TGG + chr8.1:42783718-42783737 MS.gene63084:intron 45.0%
! GTGGTGCTGGATACACATTT+GGG + chr8.1:42783940-42783959 MS.gene63084:CDS 45.0%
! TCATGTGTGTTGGTGTAGAG+TGG + chr8.1:42780902-42780921 MS.gene63084:intron 45.0%
!! AGGTACCGGTCATTATCACT+CGG - chr8.1:42782820-42782839 None:intergenic 45.0%
!! CTGGTGAGCTCTAGATATGA+GGG - chr8.1:42784006-42784025 None:intergenic 45.0%
!! TAGAGCTCACCAGCTTGTTA+TGG + chr8.1:42784013-42784032 MS.gene63084:CDS 45.0%
!!! TGCACTTTTGGTGCTTCAGA+AGG - chr8.1:42781462-42781481 None:intergenic 45.0%
AATGTGTATCCAGCACCACG+TGG - chr8.1:42783939-42783958 None:intergenic 50.0%
ACCGGTCATTATCACTCGGA+AGG - chr8.1:42782816-42782835 None:intergenic 50.0%
ACCGTTTGCGGCGATATTCA+CGG + chr8.1:42780536-42780555 MS.gene63084:CDS 50.0%
AGATATGAGGGAGAGGCCAT+TGG - chr8.1:42783994-42784013 None:intergenic 50.0%
AGGCTCTTTGCGATCAAGCT+AGG + chr8.1:42780465-42780484 MS.gene63084:CDS 50.0%
ATGTGTATCCAGCACCACGT+GGG - chr8.1:42783938-42783957 None:intergenic 50.0%
ATTGCAGCAGGTATCAGCAG+AGG - chr8.1:42782115-42782134 None:intergenic 50.0%
CGTGGAGACTGTTTCACTTC+TGG + chr8.1:42782184-42782203 MS.gene63084:CDS 50.0%
CTAACACAGGCCCGACTAAT+CGG - chr8.1:42782763-42782782 None:intergenic 50.0%
CTCGAACCTGACTCTCAATG+AGG - chr8.1:42783295-42783314 None:intergenic 50.0%
CTCTCAATGAGGGCAGTAAG+AGG - chr8.1:42783284-42783303 None:intergenic 50.0%
GGAAGGATACAATTGGGCTC+AGG + chr8.1:42784034-42784053 MS.gene63084:CDS 50.0%
GGAGACTGTTTCACTTCTGG+TGG + chr8.1:42782187-42782206 MS.gene63084:CDS 50.0%
GGCTCTTTGCGATCAAGCTA+GGG + chr8.1:42780466-42780485 MS.gene63084:CDS 50.0%
GTCACACAGATGCACCTTAC+CGG - chr8.1:42783011-42783030 None:intergenic 50.0%
TAACACAGGCCCGACTAATC+GGG - chr8.1:42782762-42782781 None:intergenic 50.0%
TACTGCCCTCATTGAGAGTC+AGG + chr8.1:42783286-42783305 MS.gene63084:CDS 50.0%
TCACACATTGGTCCTTCGTG+TGG - chr8.1:42783870-42783889 None:intergenic 50.0%
TGCTGGATACACATTTGGGC+AGG + chr8.1:42783944-42783963 MS.gene63084:CDS 50.0%
TGGAGGTCTCTCACCTTCAT+TGG + chr8.1:42783397-42783416 MS.gene63084:CDS 50.0%
TGGAGTCTTGCGTGTAGTGT+CGG - chr8.1:42784294-42784313 None:intergenic 50.0%
TGGCAGCCATATTCCCACAT+CGG - chr8.1:42784202-42784221 None:intergenic 50.0%
TGGGAATATGGCTGCCATAC+TGG + chr8.1:42784205-42784224 MS.gene63084:CDS 50.0%
TTCTCACCAACACGATGTGC+TGG + chr8.1:42782308-42782327 MS.gene63084:intron 50.0%
! CAGGTTTTCTGCTTGCATGG+AGG + chr8.1:42783380-42783399 MS.gene63084:intron 50.0%
! CGTGGTGCTGGATACACATT+TGG + chr8.1:42783939-42783958 MS.gene63084:CDS 50.0%
!! GAGCTCTAGATATGAGGGAG+AGG - chr8.1:42784001-42784020 None:intergenic 50.0%
!! GCTCACCAGCTTGTTATGGA+AGG + chr8.1:42784017-42784036 MS.gene63084:CDS 50.0%
!! GCTGGTGAGCTCTAGATATG+AGG - chr8.1:42784007-42784026 None:intergenic 50.0%
AACACAGGCCCGACTAATCG+GGG - chr8.1:42782761-42782780 None:intergenic 55.0%
AAGTGCCCTGTCACCGTTTG+CGG + chr8.1:42780524-42780543 MS.gene63084:CDS 55.0%
ATATCGCCGCAAACGGTGAC+AGG - chr8.1:42780533-42780552 None:intergenic 55.0%
ATCCTGATGATCGCTGTGGG+TGG + chr8.1:42783904-42783923 MS.gene63084:CDS 55.0%
CGATCAAGCTAGGGCGATTC+TGG + chr8.1:42780475-42780494 MS.gene63084:CDS 55.0%
CGGATCCTGATGATCGCTGT+GGG + chr8.1:42783901-42783920 MS.gene63084:CDS 55.0%
CGGTCTAGATCCGCTTGAGA+CGG - chr8.1:42780395-42780414 None:intergenic 55.0%
CGTCTCAAGCGGATCTAGAC+CGG + chr8.1:42780393-42780412 MS.gene63084:CDS 55.0%
GACCGGTACCTAACAGCTGT+TGG + chr8.1:42782829-42782848 MS.gene63084:intron 55.0%
GAGCTGTCTACGAGATCCTG+AGG + chr8.1:42782548-42782567 MS.gene63084:intron 55.0%
GATGGAGTGCAAGCCTCTGA+CGG + chr8.1:42780430-42780449 MS.gene63084:CDS 55.0%
GCCGTGAATATCGCCGCAAA+CGG - chr8.1:42780540-42780559 None:intergenic 55.0%
GGAGTCTTGCGTGTAGTGTC+GGG - chr8.1:42784293-42784312 None:intergenic 55.0%
GTGTCGGGCTCAATTTGCCT+GGG - chr8.1:42784278-42784297 None:intergenic 55.0%
TATCGCCGCAAACGGTGACA+GGG - chr8.1:42780532-42780551 None:intergenic 55.0%
TCAGAGGCTTGCACTCCATC+AGG - chr8.1:42780430-42780449 None:intergenic 55.0%
TCCTGATGATCGCTGTGGGT+GGG + chr8.1:42783905-42783924 MS.gene63084:CDS 55.0%
TCGGATCCTGATGATCGCTG+TGG + chr8.1:42783900-42783919 MS.gene63084:CDS 55.0%
TGTGTATCCAGCACCACGTG+GGG - chr8.1:42783937-42783956 None:intergenic 55.0%
! AGTGTCGGGCTCAATTTGCC+TGG - chr8.1:42784279-42784298 None:intergenic 55.0%
! CCATCAGGTGCTCGATTTGC+CGG - chr8.1:42780415-42780434 None:intergenic 55.0%
! CGATTAGTCGGGCCTGTGTT+AGG + chr8.1:42782761-42782780 MS.gene63084:intron 55.0%
! GCTTGGTGATTGCAGTACCC+AGG + chr8.1:42783811-42783830 MS.gene63084:intron 55.0%
! GGGCGATTCTGGTTGAAGAG+TGG + chr8.1:42780486-42780505 MS.gene63084:CDS 55.0%
ACACAGGCCCGACTAATCGG+GGG - chr8.1:42782760-42782779 None:intergenic 60.0%
CCGGCAAATCGAGCACCTGA+TGG + chr8.1:42780412-42780431 MS.gene63084:CDS 60.0%
CCTGATGATCGCTGTGGGTG+GGG + chr8.1:42783906-42783925 MS.gene63084:CDS 60.0%
GGAATATCCCCACGTGGTGC+TGG + chr8.1:42783927-42783946 MS.gene63084:CDS 60.0%
GGCAACAGCCCCCGATTAGT+CGG + chr8.1:42782749-42782768 MS.gene63084:intron 60.0%
GGCTCAATTTGCCTGGGTGC+TGG - chr8.1:42784272-42784291 None:intergenic 60.0%
GTGCAAGCCTCTGACGGAAG+CGG + chr8.1:42780436-42780455 MS.gene63084:CDS 60.0%
TCTGACGGAAGCGGAGGTGA+AGG + chr8.1:42780445-42780464 MS.gene63084:CDS 60.0%
TTCACCTCCGCTTCCGTCAG+AGG - chr8.1:42780446-42780465 None:intergenic 60.0%
! ACGGTGACAGGGCACTTCAC+AGG - chr8.1:42780521-42780540 None:intergenic 60.0%
! GCAACAGCCCCCGATTAGTC+GGG + chr8.1:42782750-42782769 MS.gene63084:intron 60.0%
! TGACAGGGCACTTCACAGGC+TGG - chr8.1:42780517-42780536 None:intergenic 60.0%
CAAGCCTCTGACGGAAGCGG+AGG + chr8.1:42780439-42780458 MS.gene63084:CDS 65.0%
CCCCACCCACAGCGATCATC+AGG - chr8.1:42783909-42783928 None:intergenic 65.0%
GGGTGGGGAATATCCCCACG+TGG + chr8.1:42783921-42783940 MS.gene63084:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 42780389 42784328 42780389 ID=MS.gene63084
chr8.1 mRNA 42780389 42784328 42780389 ID=MS.gene63084.t1;Parent=MS.gene63084
chr8.1 exon 42780389 42780641 42780389 ID=MS.gene63084.t1.exon1;Parent=MS.gene63084.t1
chr8.1 CDS 42780389 42780641 42780389 ID=cds.MS.gene63084.t1;Parent=MS.gene63084.t1
chr8.1 exon 42782168 42782282 42782168 ID=MS.gene63084.t1.exon2;Parent=MS.gene63084.t1
chr8.1 CDS 42782168 42782282 42782168 ID=cds.MS.gene63084.t1;Parent=MS.gene63084.t1
chr8.1 exon 42783199 42783307 42783199 ID=MS.gene63084.t1.exon3;Parent=MS.gene63084.t1
chr8.1 CDS 42783199 42783307 42783199 ID=cds.MS.gene63084.t1;Parent=MS.gene63084.t1
chr8.1 exon 42783383 42783460 42783383 ID=MS.gene63084.t1.exon4;Parent=MS.gene63084.t1
chr8.1 CDS 42783383 42783460 42783383 ID=cds.MS.gene63084.t1;Parent=MS.gene63084.t1
chr8.1 exon 42783864 42784055 42783864 ID=MS.gene63084.t1.exon5;Parent=MS.gene63084.t1
chr8.1 CDS 42783864 42784055 42783864 ID=cds.MS.gene63084.t1;Parent=MS.gene63084.t1
chr8.1 exon 42784155 42784328 42784155 ID=MS.gene63084.t1.exon6;Parent=MS.gene63084.t1
chr8.1 CDS 42784155 42784328 42784155 ID=cds.MS.gene63084.t1;Parent=MS.gene63084.t1
Gene Sequence

>MS.gene63084

ATGCCGTCTCAAGCGGATCTAGACCGGCAAATCGAGCACCTGATGGAGTGCAAGCCTCTGACGGAAGCGGAGGTGAAGGCTCTTTGCGATCAAGCTAGGGCGATTCTGGTTGAAGAGTGGAACGTCCAGCCTGTGAAGTGCCCTGTCACCGTTTGCGGCGATATTCACGGCCAGTTTTATGATCTTATTGAGTTGTTTCGTATTGGTGGGAATGCTCCTCATACTAATTACCTCTTTATGGGTGATTATGTAGGTGCGTTTTTTATTTTGTGATTTTTTTGGTATGAATTTTCTGTGGTTATGACTCAGAGATTTCCAATTTGAATTTGATACTTGGAACATTTGGTATTGAAATTGAAGTTGAATTTGGAATTTTAGTTATTAGATCTTGTTGTGTGTAAGTGTTGTTGTTTTAATATGCTGTAGGTTATGAACCATTGACAAAGACACTTGACACGACACTGACACATCGACACCTATGCTAATTTAAGAAAATAACTAAATTGAACGTAATCATGTGTGTTGGTGTAGAGTGGGCACAAAGAAACGAAGAAATGTTGAGACATAAATGTTGGTATATAATACGGAGTAGTATGGAGTAAACTAGAGAGAAACCTTATGGTTGTGATTATTTTGTATGTTAGTACCAGCAAAGCTTTATTTGTTGAAGTGTTGATGGACGTATGAAATTGAAAAGTTACGAGGGGATTTTTTATAGAATATAGTATATATCAGTAGGACTCTAGGAGTGAAGCTCTGTGATGTCACGGATCAGTACTTTGATAATTTTTTTTCCAAATTTGTCAAGGAACGTATTATTCTGTTTGAAGTTTGAAACTGAGGTATATCAAGGTTGGTATCCAAATTCTATAGTGCTTATAAGAGGTAGTATGATTCTTCAGCTTTCAATTTCTTATTTTTTTGTTAAGATTTCAATTCCTTATTTAAACAAAACTATATCTCTAAGAAAACTTATTAAGCTTTATTGTATTTTTCTTTAAAATCTGAGGGAAGGACGTGCTTAACTATGTGTTGTGAAGAAGTTAAAAGTTCAGCTTTAGTAAGTGCTACCTTCTGAAGCACCAAAAGTGCAAAACTTGACTTTTGTTGGGATGTTAGTATTGGGCACGTATCTAATACCAATGTGTTTGGTTGCTTAATCAATACATATATGTGGGGTATTCTAGATTTTTTTAGTTGTCTTTTCCGCTGTGGTTTGAATACTTAACTGTCACTGGTATGAAATTTTTACCTTATGTTCTCTGTCAATATCATTGCTAAAATATGTGCCACAAATCTCATATTTTGTCTCATCTATACAGAAGATGCTCAAAGAGGAGAGTGTCATTAATATTTGATACTATTTCTGTTTTTACCTAATAGGCAAATATTTTTTATGGAAGTGATATATAATATCTGTATTTTACTCTCTAGTTAGTAATTTTTTATTAGTATGTTATTTTAGATAATAAAAGATTAATGTGTTATTAGTTTGGACTTATAGAATTGCAAACATATATTTATTAATTTCAACATATATTTACTATGTTTTATGATTACTTTGATGCATATCTATATTTCAGTTGACATCATTTATTGCCCCACATTTTTAAAGAGTATGATACCAGTATCATATTTGTGCATCATATTGCCTTCACTCAATTTCAGCTCTTCTATCATCTTACTGCTTTTAATTGTTTTCTAATTATAATTATAATATACACCTCTGCTGATACCTGCTGCAATTTCCTTATGACAATGCTTCATTAATTCATACAGATCGTGGATACTATTCCGTGGAGACTGTTTCACTTCTGGTGGCCTTGAAAGTCCGTTACAGAGATAGAATTACAATTCTCAGAGGAAACCATGAAAGCCGTCAAATTACTCAAGTGTATGCACTACTTCTCATTATATGTTTCTCACCAACACGATGTGCTGGCATTTTTGTTAAGCCCCAATTATTTTCCTTACCCAATAGAGTTCAATTGTCAGTGAACCGTCTATCCATAGGTTAGTAATGAAGGGTTTAGGTGAAACAATTTGGTTTTGTGGGACTGGAATTCTTCCATCATTTTTCATTCTCATGATCATGTGGATGAGATATTTAGTTTTAGGGAATAAATTCAAATAATATGATATATGTTCGTTGTTGTTTTGAGCTGTCTACGAGATCCTGAGGATGCAGATAGAAATATTATAGGGTGTGAGGAATGAGTAGTAAAATTCCTTGGTTGATATTAACATGCAACATGGATCACTTGGAGTGCATGTTTAAAAGGGCACACTAACTGTAAACAATATTTATTAAAAGGACACACTAACCTGTTAAACAATATATATGAAGCATGTAACTGATAGGCAACAGCCCCCGATTAGTCGGGCCTGTGTTAGGAAAAATAAGAGAATCACAGAGGATCATAACCTTCCGAGTGATAATGACCGGTACCTAACAGCTGTTGGTTAGTTAGAAGACTTTAAGGTGGTTATAAGGAGAGTGAGAGCATATCAGGAAGTATCTTTGCAATCGTATCATTCTTGGTATGGGGGAGTTAATTCCTCTGTCAATAACAGTGGTCTCTGTTTTTCATTTTTTTCTTTATTCTGATGCAGTTTCTACCGGTAAGGTGCATCTGTGTGACACTTGTTAATGTTAACACCAATTAATCAAAGATTTGAAATAGAAAAAGAAAAAAAAATCTCTATAAACCACTAGAAACAAAATGTTTATTTTAATATGAAAATAAAAAAATGTTTGAATCTGTTGCTTTGCCATTTCATCGAAAGCCTTCTCCATCTTCTGCTTTCAGGTATGGCTTCTACGATGAATGCTTGAGAAAATACGGAAATGCCAACGTCTGGAAATTCTTTACCGACTTGTTTGATTATTTACCTCTTACTGCCCTCATTGAGAGTCAGGTTCGAGTTATATATGTTGCAGAACATTCTTTTGACTAATTGTATGCCGGCCTCTAACTTCCTGATATATTTCAGGTTTTCTGCTTGCATGGAGGTCTCTCACCTTCATTGGATACACTGGATAACATCAGAGCATTGGATCGTATTCAAGAGGTTTGTGTGTAGCTTAATGCTATGCATTGTCTTTTGATTCATTTGATAATAAGAGCAGTTTTTTTTATCTGAAGAATGACATCTTGAGCTAAACATCCGTCTTATGTTTAAGTTGTGAAATACTTGATTTGATGTTGCAATTTTTGTTGGTTTAATTGAGGGACCTTCAGCAGGAACATATTTCTCATACAATTTTTTTTAATCAAATATCTTGTATGCTATCATCCTTGCTGCAATTTTCTTAGGCTTTTAAGATGGCTCATCTTTTGGTCCTTAGTGGAATGCTGTTTGTTAATACTGATATTGTCTTGACATGTATTGACAATGTTATTGACGATGTTAACTGAATTGCTTGGTGATTGCAGTACCCAGGTATGCTAACAACTGTAATTGTACATTATAGGTTCCACACGAAGGACCAATGTGTGATCTCTTGTGGTCGGATCCTGATGATCGCTGTGGGTGGGGAATATCCCCACGTGGTGCTGGATACACATTTGGGCAGGATATAGCTTCTCAGTTCAATCATACCAATGGCCTCTCCCTCATATCTAGAGCTCACCAGCTTGTTATGGAAGGATACAATTGGGCTCAGGTGACTGACAAATATTTTAAATCAGTTAATTATATTTACCCTCTTGAGTAATACCTCCTGTTGCTATATCTAAGGACTTTATGTTGATAACTATTTTAGGAGAAGAACGTGGTCACTGTATTTAGTGCTCCAAATTACTGTTACCGATGTGGGAATATGGCTGCCATACTGGAAATTGGAGAAAATATGGATCAAAATTTTCTTCAATTTGATCCAGCACCCAGGCAAATTGAGCCCGACACTACACGCAAGACTCCAGACTATTTTTTATAA
Protein sequence

>MS.gene63084.t1

MPSQADLDRQIEHLMECKPLTEAEVKALCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPHTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKFFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWAQEKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL