AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58553

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58553.t1 MTR_5g037200 100.000 306 0 0 1 306 1 306 0.0 642
MS.gene58553.t1 MTR_8g062430 97.386 306 8 0 1 306 1 306 0.0 626
MS.gene58553.t1 MTR_8g085610 80.263 304 60 0 3 306 5 308 0.0 534
MS.gene58553.t1 MTR_7g107310 79.070 301 63 0 6 306 13 313 0.0 522
MS.gene58553.t1 MTR_8g085610 81.915 282 51 0 25 306 3 284 0.0 504
MS.gene58553.t1 MTR_5g093990 66.118 304 101 2 5 306 2 305 1.54e-152 429
MS.gene58553.t1 MTR_5g037200 100.000 186 0 0 1 186 1 186 2.15e-136 385
MS.gene58553.t1 MTR_1g039380 55.960 302 132 1 6 306 2 303 8.03e-128 367
MS.gene58553.t1 MTR_1g039380 58.484 277 114 1 31 306 3 279 2.54e-123 354
MS.gene58553.t1 MTR_1g079950 45.819 299 153 3 4 294 3 300 2.96e-95 285
MS.gene58553.t1 MTR_1g079950 45.819 299 153 3 4 294 3 300 3.16e-95 285
MS.gene58553.t1 MTR_1g079950 45.819 299 153 3 4 294 3 300 3.48e-95 285
MS.gene58553.t1 MTR_7g112870 46.154 299 154 3 7 299 10 307 4.64e-95 284
MS.gene58553.t1 MTR_1g079950 45.819 299 153 3 4 294 32 329 5.54e-95 285
MS.gene58553.t1 MTR_5g081230 46.102 295 152 3 6 294 24 317 3.99e-94 281
MS.gene58553.t1 MTR_7g116380 47.826 276 142 2 20 294 26 300 5.71e-94 281
MS.gene58553.t1 MTR_7g116380 47.826 276 142 2 20 294 26 300 7.59e-94 281
MS.gene58553.t1 MTR_8g098980 48.679 265 134 2 20 283 27 290 2.02e-93 280
MS.gene58553.t1 MTR_1g074880 48.175 274 140 2 20 292 26 298 1.71e-91 275
MS.gene58553.t1 MTR_1g074880 48.175 274 140 2 20 292 26 298 1.82e-91 275
MS.gene58553.t1 MTR_8g005010 44.483 290 152 3 7 288 4 292 1.87e-91 274
MS.gene58553.t1 MTR_1g043240 45.804 286 153 2 20 304 26 310 2.47e-91 275
MS.gene58553.t1 MTR_1g079950 48.617 253 125 3 54 302 34 285 2.38e-83 254
MS.gene58553.t1 MTR_1g074880 50.622 241 117 2 53 292 4 243 1.28e-82 250
MS.gene58553.t1 MTR_1g074880 50.622 241 117 2 53 292 4 243 1.38e-82 250
MS.gene58553.t1 MTR_4g050540 39.792 289 160 5 24 298 673 961 7.60e-60 206
MS.gene58553.t1 MTR_3g452710 42.449 245 135 5 50 290 222 464 1.58e-59 197
MS.gene58553.t1 MTR_2g100130 37.884 293 171 7 7 290 93 383 5.77e-59 194
MS.gene58553.t1 MTR_3g452710 42.449 245 135 5 50 290 289 531 8.36e-59 197
MS.gene58553.t1 MTR_2g087530 39.932 293 155 8 24 298 555 844 3.76e-58 200
MS.gene58553.t1 MTR_2g100130 37.884 293 171 7 7 290 192 482 5.35e-58 194
MS.gene58553.t1 MTR_2g087530 39.932 293 155 8 24 298 668 957 5.83e-58 201
MS.gene58553.t1 MTR_2g100130 37.884 293 171 7 7 290 163 453 6.21e-58 193
MS.gene58553.t1 MTR_2g100130 37.884 293 171 7 7 290 202 492 6.77e-58 194
MS.gene58553.t1 MTR_1g089370 41.825 263 139 5 24 272 552 814 1.55e-57 199
MS.gene58553.t1 MTR_2g100130 37.931 290 169 7 7 287 202 489 1.02e-56 191
MS.gene58553.t1 MTR_2g100130 37.931 290 168 8 7 287 202 488 2.68e-55 187
MS.gene58553.t1 MTR_2g100130 37.931 290 168 8 7 287 163 449 3.68e-55 186
MS.gene58553.t1 MTR_2g100130 44.749 219 115 5 49 263 248 464 2.45e-54 184
MS.gene58553.t1 MTR_2g100160 40.891 247 139 6 49 290 158 402 2.37e-53 180
MS.gene58553.t1 MTR_8g072600 32.414 290 141 10 26 262 107 394 2.08e-31 122
MS.gene58553.t1 MTR_8g072600 33.333 252 120 8 20 225 93 342 1.52e-27 110
MS.gene58553.t1 MTR_2g099710 31.010 287 124 12 25 262 211 472 1.03e-21 95.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58553.t1 AT1G10430 94.771 306 16 0 1 306 1 306 0.0 617
MS.gene58553.t1 AT1G10430 94.771 306 16 0 1 306 1 306 0.0 617
MS.gene58553.t1 AT1G59830 94.444 306 17 0 1 306 1 306 0.0 612
MS.gene58553.t1 AT1G69960 91.803 305 25 0 2 306 3 307 0.0 599
MS.gene58553.t1 AT2G42500 80.066 301 60 0 6 306 13 313 0.0 526
MS.gene58553.t1 AT3G58500 78.571 308 64 1 1 306 6 313 0.0 525
MS.gene58553.t1 AT1G59830 93.281 253 17 0 1 253 1 253 5.41e-180 497
MS.gene58553.t1 AT5G55260 66.118 304 101 2 5 306 2 305 3.06e-154 434
MS.gene58553.t1 AT4G26720 65.461 304 103 2 5 306 2 305 1.30e-153 432
MS.gene58553.t1 AT2G42500 68.771 301 47 1 6 306 13 266 2.72e-153 430
MS.gene58553.t1 AT5G55260 58.261 345 101 3 5 306 2 346 9.71e-146 414
MS.gene58553.t1 AT3G19980 55.960 302 132 1 6 306 2 303 1.69e-127 366
MS.gene58553.t1 AT1G50370 55.298 302 134 1 6 306 2 303 2.66e-126 363
MS.gene58553.t1 AT2G29400 47.253 273 143 1 20 292 43 314 7.15e-96 286
MS.gene58553.t1 AT2G39840 47.119 295 149 3 6 294 21 314 9.48e-96 286
MS.gene58553.t1 AT5G27840 47.635 296 148 3 1 290 8 302 1.40e-94 283
MS.gene58553.t1 AT5G27840 47.635 296 148 3 1 290 8 302 2.24e-94 283
MS.gene58553.t1 AT5G27840 47.635 296 148 3 1 290 8 302 2.37e-94 282
MS.gene58553.t1 AT5G27840 47.635 296 148 3 1 290 8 302 2.37e-94 282
MS.gene58553.t1 AT3G05580 47.586 290 145 3 7 290 14 302 2.36e-93 280
MS.gene58553.t1 AT1G64040 49.434 265 132 2 20 283 27 290 3.89e-93 279
MS.gene58553.t1 AT5G43380 46.667 285 143 3 7 283 6 289 3.64e-91 275
MS.gene58553.t1 AT5G59160 46.350 274 145 2 20 292 36 308 5.35e-91 273
MS.gene58553.t1 AT5G59160 46.350 274 145 2 20 292 36 308 5.35e-91 273
MS.gene58553.t1 AT5G59160 46.350 274 145 2 20 292 36 308 5.35e-91 273
MS.gene58553.t1 AT5G43380 46.667 285 143 3 7 283 6 289 5.58e-91 274
MS.gene58553.t1 AT4G11240 47.547 265 137 2 20 283 27 290 6.46e-91 273
MS.gene58553.t1 AT5G43380 46.667 285 143 3 7 283 6 289 7.04e-91 273
MS.gene58553.t1 AT3G46820 45.620 274 147 2 20 292 36 308 6.13e-89 268
MS.gene58553.t1 AT2G42500 73.214 168 40 2 1 163 6 173 2.94e-84 251
MS.gene58553.t1 AT2G42500 75.625 160 34 2 1 155 6 165 4.92e-83 248
MS.gene58553.t1 AT2G42500 70.857 175 44 3 1 170 6 178 1.20e-82 247
MS.gene58553.t1 AT3G05580 49.187 246 118 3 1 240 8 252 4.42e-80 243
MS.gene58553.t1 AT2G42810 42.537 268 144 6 31 290 201 466 1.05e-63 209
MS.gene58553.t1 AT2G42810 42.537 268 144 6 31 290 201 466 1.05e-63 209
MS.gene58553.t1 AT2G42810 42.537 268 144 6 31 290 201 466 1.05e-63 209
MS.gene58553.t1 AT2G42810 42.537 268 144 6 31 290 255 520 4.00e-63 208
MS.gene58553.t1 AT2G42810 42.537 268 144 6 31 290 254 519 4.31e-63 208
MS.gene58553.t1 AT4G03080 41.481 270 144 5 24 279 554 823 5.91e-60 205
MS.gene58553.t1 AT1G03445 41.328 271 142 7 24 279 480 748 1.36e-59 203
MS.gene58553.t1 AT1G03445 41.328 271 142 7 24 279 480 748 1.64e-59 203
MS.gene58553.t1 AT2G27210 39.655 290 160 6 24 298 674 963 1.20e-58 202
MS.gene58553.t1 AT2G27210 39.655 290 160 6 24 298 679 968 1.22e-58 202
MS.gene58553.t1 AT1G08420 40.741 270 146 5 24 279 685 954 4.25e-58 201
MS.gene58553.t1 AT1G08420 40.741 270 146 5 24 279 690 959 4.49e-58 201
MS.gene58553.t1 AT5G63870 32.353 306 142 11 49 291 79 382 1.71e-31 122
MS.gene58553.t1 AT5G63870 32.353 306 142 11 49 291 79 382 1.71e-31 122
MS.gene58553.t1 AT5G63870 36.449 214 97 7 49 225 79 290 2.34e-28 111
MS.gene58553.t1 AT1G48120 32.087 321 148 11 32 283 635 954 1.48e-26 110
MS.gene58553.t1 AT5G10900 28.514 249 143 9 20 239 191 433 8.15e-19 87.0
MS.gene58553.t1 AT5G10900 28.514 249 143 9 20 239 191 433 9.24e-19 87.0
MS.gene58553.t1 AT5G10900 28.514 249 143 9 20 239 191 433 9.53e-19 87.0

Find 80 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATACTAATTATCTCTTTA+TGG 0.113568 5.3:+25490845 MS.gene58553:CDS
CCACATCGGTAGCAGTAATT+TGG 0.207567 5.3:-25494437 None:intergenic
GATGAATGCTTGAGAAAATA+TGG 0.265964 5.3:+25493466 MS.gene58553:CDS
AGTGGAGACTGTTTCACTTT+TGG 0.279854 5.3:+25492746 MS.gene58553:CDS
ATGGCTGCCATTCTGGAAAT+TGG 0.280680 5.3:+25494464 MS.gene58553:CDS
TGGGAATATGGCTGCCATTC+TGG 0.284450 5.3:+25494457 MS.gene58553:CDS
GATACTAATTATCTCTTTAT+GGG 0.296309 5.3:+25490846 MS.gene58553:CDS
CTGCTACCGATGTGGGAATA+TGG 0.319446 5.3:+25494445 MS.gene58553:CDS
TGGAGGTCTCTCACCATCTT+TGG 0.327030 5.3:+25493650 MS.gene58553:CDS
TCTGGAAATTGGAGAGAATA+TGG 0.342558 5.3:+25494475 MS.gene58553:CDS
CATGGAGTGCAAGCCTTTAC+CGG 0.348936 5.3:+25490668 MS.gene58553:CDS
GACTGCCCTCATTGAGAGTC+AGG 0.351563 5.3:+25493540 MS.gene58553:CDS
CCCAGACGATCGTTGTGGTT+GGG 0.364879 5.3:+25494168 MS.gene58553:CDS
GGCTCAATTTGCCTTGGAGC+TGG 0.369766 5.3:-25494521 None:intergenic
CCCCAACCACAACGATCGTC+TGG 0.379839 5.3:-25494169 None:intergenic
GAGATAGAATTACAATTCTC+AGG 0.380189 5.3:+25492790 MS.gene58553:CDS
ATATCACCACAAACCGTAAC+AGG 0.389438 5.3:-25490768 None:intergenic
CTTACACTTGAGTAATTTGA+CGG 0.424338 5.3:-25492827 None:intergenic
ACCGGTGAAGTGTCCTGTTA+CGG 0.425170 5.3:+25490755 MS.gene58553:CDS
AAGTGTCCTGTTACGGTTTG+TGG 0.436961 5.3:+25490762 MS.gene58553:CDS
TTCACATCCGCCTCCGGTAA+AGG 0.440700 5.3:-25490681 None:intergenic
CCAGACGATCGTTGTGGTTG+GGG 0.450228 5.3:+25494169 MS.gene58553:CDS
AATATGGAAATGCCAATGTC+TGG 0.452706 5.3:+25493482 MS.gene58553:CDS
CGTGGTGCTGGATATACGTT+TGG 0.454119 5.3:+25494202 MS.gene58553:CDS
GGTATATCTCCACGTGGTGC+TGG 0.461540 5.3:+25494190 MS.gene58553:CDS
ACGGTTTGTGGTGATATTCA+TGG 0.462488 5.3:+25490774 MS.gene58553:CDS
CCGCGCCTTGGATCGCATAC+AGG 0.472606 5.3:+25493689 MS.gene58553:CDS
TGAGGAATGGAACGTTCAAC+CGG 0.483631 5.3:+25490737 MS.gene58553:CDS
GGTGTCTTTCGTGTAGTGTC+AGG 0.485525 5.3:-25494542 None:intergenic
CTCTTTATGGGAGATTATGT+AGG 0.493968 5.3:+25490858 MS.gene58553:CDS
GAGCGATTCTTGTTGAGGAA+TGG 0.495521 5.3:+25490724 MS.gene58553:CDS
ACCCAGACGATCGTTGTGGT+TGG 0.495708 5.3:+25494167 MS.gene58553:CDS
GTGTCAGGCTCAATTTGCCT+TGG 0.498966 5.3:-25494527 None:intergenic
AGCGCCTTCACATCCGCCTC+CGG 0.505019 5.3:-25490687 None:intergenic
GGTAAAGAATTTCCAGACAT+TGG 0.508637 5.3:-25493494 None:intergenic
ATTCTCTCCAATTTCCAGAA+TGG 0.510452 5.3:-25494471 None:intergenic
TCGGATTGGTGGAAATGCTC+CGG 0.512157 5.3:+25490824 MS.gene58553:CDS
TCAATATAGGTTCCGCATGA+AGG 0.513509 5.3:+25494118 MS.gene58553:intron
AGGTAAATAATCAAACAAAT+CGG 0.517054 5.3:-25493515 None:intergenic
ATAAAGAGATAATTAGTATC+CGG 0.517202 5.3:-25490843 None:intergenic
GCTCAGTTCAATCACACAAA+TGG 0.518477 5.3:+25494238 MS.gene58553:CDS
CCAAATTACTGCTACCGATG+TGG 0.523948 5.3:+25494437 MS.gene58553:CDS
ACTGGATAATATCCGCGCCT+TGG 0.529586 5.3:+25493677 MS.gene58553:CDS
CAAATTACTGCTACCGATGT+GGG 0.532060 5.3:+25494438 MS.gene58553:CDS
GTGCAAGCCTTTACCGGAGG+CGG 0.534349 5.3:+25490674 MS.gene58553:CDS
TCGGCAGATCGAGAGTCTCA+TGG 0.543255 5.3:+25490650 MS.gene58553:CDS
CTCACCATCTTTGGATACAC+TGG 0.543454 5.3:+25493659 MS.gene58553:CDS
AGCGAGAGCGATTCTTGTTG+AGG 0.545800 5.3:+25490719 MS.gene58553:CDS
TTATCCAGTGTATCCAAAGA+TGG 0.549296 5.3:-25493663 None:intergenic
TTTACCGGAGGCGGATGTGA+AGG 0.556113 5.3:+25490683 MS.gene58553:CDS
CGATCCAGATCCGCGTGTGA+CGG 0.559405 5.3:-25490630 None:intergenic
TGCTGGATATACGTTTGGAC+AGG 0.564091 5.3:+25494207 MS.gene58553:CDS
TAGAGCTCATCAGCTTGTGA+TGG 0.570025 5.3:+25494276 MS.gene58553:CDS
AGATAGAATTACAATTCTCA+GGG 0.575342 5.3:+25492791 MS.gene58553:CDS
CATAAATTTATGCAGATCGT+GGG 0.576093 5.3:+25492715 MS.gene58553:intron
GACCAATGTGTGATCTCTTG+TGG 0.576863 5.3:+25494140 MS.gene58553:CDS
CGTCACACGCGGATCTGGAT+CGG 0.578779 5.3:+25490631 MS.gene58553:CDS
CCCAACCACAACGATCGTCT+GGG 0.580244 5.3:-25494168 None:intergenic
GCTCATCAGCTTGTGATGGA+AGG 0.582864 5.3:+25494280 MS.gene58553:CDS
TGCAGTTTGATCCAGCTCCA+AGG 0.585413 5.3:+25494510 MS.gene58553:CDS
ACCGTAACAGGACACTTCAC+CGG 0.586305 5.3:-25490756 None:intergenic
AACCTCCTGTATGCGATCCA+AGG 0.586881 5.3:-25493694 None:intergenic
TTCAAACCTGACTCTCAATG+AGG 0.590959 5.3:-25493546 None:intergenic
TTCAACCATGCCGTCACACG+CGG 0.601853 5.3:+25490620 None:intergenic
CGCCTTGGATCGCATACAGG+AGG 0.602261 5.3:+25493692 MS.gene58553:CDS
TCAAACCTGACTCTCAATGA+GGG 0.610004 5.3:-25493545 None:intergenic
TTGTGATGGAAGGATACAAT+TGG 0.613571 5.3:+25494290 MS.gene58553:CDS
CTCTCAATGAGGGCAGTCAG+AGG 0.620691 5.3:-25493535 None:intergenic
GGAAGGATACAATTGGTGCC+AGG 0.622019 5.3:+25494297 MS.gene58553:CDS
TGACACTACACGAAAGACAC+CGG 0.642789 5.3:+25494544 MS.gene58553:CDS
TCACACATTGGTCCTTCATG+CGG 0.659593 5.3:-25494130 None:intergenic
CCTGTATGCGATCCAAGGCG+CGG 0.673253 5.3:-25493689 None:intergenic
GGAGTGCAAGCCTTTACCGG+AGG 0.673342 5.3:+25490671 MS.gene58553:CDS
TGGCAGCCATATTCCCACAT+CGG 0.677796 5.3:-25494451 None:intergenic
AGATCGTGGGTACTATTCAG+TGG 0.679198 5.3:+25492728 MS.gene58553:intron
TCTGACCCAGACGATCGTTG+TGG 0.702404 5.3:+25494163 MS.gene58553:CDS
AACGTATATCCAGCACCACG+TGG 0.705317 5.3:-25494199 None:intergenic
GATAGAATTACAATTCTCAG+GGG 0.726280 5.3:+25492792 MS.gene58553:CDS
GACCACAAGAGATCACACAT+TGG 0.731997 5.3:-25494142 None:intergenic
GGTTGGGGTATATCTCCACG+TGG 0.804235 5.3:+25494184 MS.gene58553:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATGAAATATTAAATGA+GGG - chr5.3:25494031-25494050 None:intergenic 15.0%
!! CTATAAATTATAACACAATA+CGG - chr5.3:25491924-25491943 None:intergenic 15.0%
!! TATTGAGTTTGATATATTAT+CGG + chr5.3:25491316-25491335 MS.gene58553:intron 15.0%
!! TTAGTATCAAATAATTTACA+TGG - chr5.3:25493760-25493779 None:intergenic 15.0%
!! TTGAATATAAGAAACATAAA+AGG + chr5.3:25493386-25493405 MS.gene58553:intron 15.0%
!!! AAGGTTTGATTTTTTTATTT+TGG + chr5.3:25491165-25491184 MS.gene58553:intron 15.0%
!!! ACATAAAAGGAATTTTATTT+TGG + chr5.3:25493399-25493418 MS.gene58553:intron 15.0%
!!! AGGTTAATTTGATTTATTTA+GGG + chr5.3:25490930-25490949 MS.gene58553:intron 15.0%
!!! ATAGTTATTTCAGTTTTATA+AGG + chr5.3:25491281-25491300 MS.gene58553:intron 15.0%
!!! TTTATATAGTGTTTTGTTTT+CGG + chr5.3:25490984-25491003 MS.gene58553:intron 15.0%
!!! TTTGTAGTTTAATTTTGATA+CGG + chr5.3:25491652-25491671 MS.gene58553:intron 15.0%
!! AAATTTATGCCAGAATTATT+AGG - chr5.3:25492704-25492723 None:intergenic 20.0%
!! AGGTAAATAATCAAACAAAT+CGG - chr5.3:25493518-25493537 None:intergenic 20.0%
!! ATAAAGAGATAATTAGTATC+CGG - chr5.3:25490846-25490865 None:intergenic 20.0%
!! CAGAAATGAAATATTAAATG+AGG - chr5.3:25494032-25494051 None:intergenic 20.0%
!! GATACTAATTATCTCTTTAT+GGG + chr5.3:25490846-25490865 MS.gene58553:CDS 20.0%
!! TATTAAATGGCTATTATAAC+TGG + chr5.3:25493724-25493743 MS.gene58553:intron 20.0%
!!! ACAATTTTGCTTTTCAATAT+AGG + chr5.3:25494105-25494124 MS.gene58553:intron 20.0%
!!! ACTTGTCTTTTTATTTTTCT+TGG + chr5.3:25492038-25492057 MS.gene58553:intron 20.0%
!!! AGGTGAATTTTATGTATATA+AGG + chr5.3:25491146-25491165 MS.gene58553:intron 20.0%
!!! GAGGTTAATTTGATTTATTT+AGG + chr5.3:25490929-25490948 MS.gene58553:intron 20.0%
!!! GGATATACATATCATTTTAT+GGG + chr5.3:25492132-25492151 MS.gene58553:intron 20.0%
!!! GTCTTTTTTATTACTCTTTT+AGG + chr5.3:25494385-25494404 MS.gene58553:intron 20.0%
!!! GTTACTGTAATATATTTTGA+GGG + chr5.3:25492519-25492538 MS.gene58553:intron 20.0%
!!! TAATTGCTTCTTTTATATGT+TGG + chr5.3:25491396-25491415 MS.gene58553:intron 20.0%
!!! TCAAAGTGTCTATATTTTAA+CGG + chr5.3:25492406-25492425 MS.gene58553:intron 20.0%
!!! TCTAAAATCAAACATATGAT+TGG - chr5.3:25491711-25491730 None:intergenic 20.0%
!!! TGATACTAAGAACATTTTTA+TGG + chr5.3:25493771-25493790 MS.gene58553:intron 20.0%
!!! TGGATATACATATCATTTTA+TGG + chr5.3:25492131-25492150 MS.gene58553:intron 20.0%
!!! TGTTACTGTAATATATTTTG+AGG + chr5.3:25492518-25492537 MS.gene58553:intron 20.0%
!!! TTATGATGTTTTCTGAAAAA+TGG + chr5.3:25491443-25491462 MS.gene58553:intron 20.0%
!!! TTCATGTATGATAGAATTTT+TGG + chr5.3:25492100-25492119 MS.gene58553:intron 20.0%
!!! TTTATTTAGGGTTTGATTAT+TGG + chr5.3:25490942-25490961 MS.gene58553:intron 20.0%
! AATTAGATTATTTGCATCTG+TGG + chr5.3:25492663-25492682 MS.gene58553:intron 25.0%
! ACAATTCTCCTTTAAACAAA+TGG - chr5.3:25492010-25492029 None:intergenic 25.0%
! AGATAGAATTACAATTCTCA+GGG + chr5.3:25492791-25492810 MS.gene58553:CDS 25.0%
! AGCTGAATTAGATGTATATA+GGG + chr5.3:25491030-25491049 MS.gene58553:intron 25.0%
! ATGAATCAATCTAAGTGTTA+CGG - chr5.3:25494331-25494350 None:intergenic 25.0%
! ATTAGATTATTTGCATCTGT+GGG + chr5.3:25492664-25492683 MS.gene58553:intron 25.0%
! CAGAAAATCTGCAATAAAAA+AGG - chr5.3:25493624-25493643 None:intergenic 25.0%
! CCTCAAGAAAACAAAAAATT+AGG - chr5.3:25490913-25490932 None:intergenic 25.0%
! CTACAATTTCCTAATAATTC+TGG + chr5.3:25492692-25492711 MS.gene58553:intron 25.0%
! CTTGCTTAAAGTTTAAGAAT+AGG + chr5.3:25492929-25492948 MS.gene58553:intron 25.0%
! GAATTATTAGGAAATTGTAG+TGG - chr5.3:25492692-25492711 None:intergenic 25.0%
! GGATACTAATTATCTCTTTA+TGG + chr5.3:25490845-25490864 MS.gene58553:CDS 25.0%
! GTTGTATTTGTTTGACTAAT+TGG + chr5.3:25491485-25491504 MS.gene58553:intron 25.0%
! TAAAACACAAACACAATGAA+TGG - chr5.3:25492980-25492999 None:intergenic 25.0%
! TAAGTTTGAGCTCAAAAAAT+TGG + chr5.3:25492228-25492247 MS.gene58553:intron 25.0%
! TACTAGATTCAGATGTAATA+AGG + chr5.3:25492581-25492600 MS.gene58553:intron 25.0%
! TATATCTTTCTCAGTATTCT+GGG + chr5.3:25493113-25493132 MS.gene58553:intron 25.0%
! TTGTTCTTGAGATGAATTAT+TGG + chr5.3:25491194-25491213 MS.gene58553:intron 25.0%
!! ACTTAGATTGATTCATTTCA+AGG + chr5.3:25494335-25494354 MS.gene58553:intron 25.0%
!! TGTATATAGGGTTTGAATTT+TGG + chr5.3:25491042-25491061 MS.gene58553:intron 25.0%
!! TGTATTTGAGTCTATTTTGT+TGG + chr5.3:25491225-25491244 MS.gene58553:intron 25.0%
!!! AGTGTTTTAGTGAGTTTTTA+AGG + chr5.3:25493149-25493168 MS.gene58553:intron 25.0%
!!! ATAAAAAAGGTGTTAGACAA+TGG - chr5.3:25493611-25493630 None:intergenic 25.0%
!!! ATTTGTTTTCTTACCATTTC+AGG + chr5.3:25493431-25493450 MS.gene58553:intron 25.0%
!!! ATTTTGGTTTTGGTATTTCT+TGG + chr5.3:25491058-25491077 MS.gene58553:intron 25.0%
!!! CCTAATTTTTTGTTTTCTTG+AGG + chr5.3:25490910-25490929 MS.gene58553:intron 25.0%
!!! GTATGATAGAATTTTTGGTT+TGG + chr5.3:25492105-25492124 MS.gene58553:intron 25.0%
!!! GTTTGATTATTGGTTTTATG+AGG + chr5.3:25490952-25490971 MS.gene58553:intron 25.0%
!!! TAGAATTTTTGGTTTGGAAT+TGG + chr5.3:25492111-25492130 MS.gene58553:intron 25.0%
!!! TTATATGTTGGAGTCTTTTT+TGG + chr5.3:25491408-25491427 MS.gene58553:intron 25.0%
AACACAATGAATGGAGTAAT+TGG - chr5.3:25492971-25492990 None:intergenic 30.0%
AACCAAGATCTGAAAAAATG+AGG - chr5.3:25491976-25491995 None:intergenic 30.0%
ACTTTGCATACCATACTTTA+GGG - chr5.3:25493828-25493847 None:intergenic 30.0%
AGGTGAATTTGATGCATATA+GGG + chr5.3:25491087-25491106 MS.gene58553:intron 30.0%
AGTGACATATGTTTGTATTG+AGG + chr5.3:25492482-25492501 MS.gene58553:intron 30.0%
CATAAATTTATGCAGATCGT+GGG + chr5.3:25492715-25492734 MS.gene58553:intron 30.0%
CTATATCTTTCTCAGTATTC+TGG + chr5.3:25493112-25493131 MS.gene58553:intron 30.0%
CTTAACAACTTCAATATCTG+AGG + chr5.3:25492554-25492573 MS.gene58553:intron 30.0%
CTTACACTTGAGTAATTTGA+CGG - chr5.3:25492830-25492849 None:intergenic 30.0%
GAACTTTACATTGAGATAGA+TGG - chr5.3:25493023-25493042 None:intergenic 30.0%
GAGATAGAATTACAATTCTC+AGG + chr5.3:25492790-25492809 MS.gene58553:CDS 30.0%
GAGCTGAATTAGATGTATAT+AGG + chr5.3:25491029-25491048 MS.gene58553:intron 30.0%
GATAGAATTACAATTCTCAG+GGG + chr5.3:25492792-25492811 MS.gene58553:CDS 30.0%
GATGAATGCTTGAGAAAATA+TGG + chr5.3:25493466-25493485 MS.gene58553:CDS 30.0%
GGGAAAAAAGATCTTTAACT+TGG - chr5.3:25493807-25493826 None:intergenic 30.0%
TAATCCATATAACACTGTCA+GGG - chr5.3:25491807-25491826 None:intergenic 30.0%
TACAAGTGAAACATCATATC+TGG + chr5.3:25493239-25493258 MS.gene58553:intron 30.0%
TACTTTGCATACCATACTTT+AGG - chr5.3:25493829-25493848 None:intergenic 30.0%
TCTCAATGTAAAGTTCAATG+CGG + chr5.3:25493027-25493046 MS.gene58553:intron 30.0%
TGAATCAATCTAAGTGTTAC+GGG - chr5.3:25494330-25494349 None:intergenic 30.0%
TGCAACACAATTAAGAAACA+GGG + chr5.3:25492200-25492219 MS.gene58553:intron 30.0%
TTAATCCATATAACACTGTC+AGG - chr5.3:25491808-25491827 None:intergenic 30.0%
TTGGTATTTCTTGGTTTATG+AGG + chr5.3:25491067-25491086 MS.gene58553:intron 30.0%
TTTACATTGAGATAGATGGA+TGG - chr5.3:25493019-25493038 None:intergenic 30.0%
! ATGATCTGATTGAGCTTTTT+CGG + chr5.3:25490805-25490824 MS.gene58553:CDS 30.0%
! CTTGTATGAGAGGATTTTAT+AGG + chr5.3:25492352-25492371 MS.gene58553:intron 30.0%
! GAGGTTTGTGTGTTATTAAA+TGG + chr5.3:25493711-25493730 MS.gene58553:intron 30.0%
! GATTGCAAAAAATCAAGTTG+CGG - chr5.3:25493070-25493089 None:intergenic 30.0%
! GTTGTCTGCATTTTTCTTTT+TGG + chr5.3:25493935-25493954 MS.gene58553:intron 30.0%
! TGTGTTTTATAACTTTCTGC+TGG + chr5.3:25492991-25493010 MS.gene58553:intron 30.0%
!! ATTGGTTGTGATTTGTTGAA+AGG - chr5.3:25491693-25491712 None:intergenic 30.0%
!! CTGTAATATATTTTGAGGGA+AGG + chr5.3:25492523-25492542 MS.gene58553:intron 30.0%
!! GTTATGTGCCATTTGTTTAA+AGG + chr5.3:25491999-25492018 MS.gene58553:intron 30.0%
!! TTGGTTGTGATTTGTTGAAA+GGG - chr5.3:25491692-25491711 None:intergenic 30.0%
!! TTTTCTTACCATTTCAGGTA+TGG + chr5.3:25493436-25493455 MS.gene58553:intron 30.0%
!!! ATCCTCATTTTTTCAGATCT+TGG + chr5.3:25491971-25491990 MS.gene58553:intron 30.0%
!!! ATCTTTTTTCCCCTAAAGTA+TGG + chr5.3:25493815-25493834 MS.gene58553:intron 30.0%
!!! ATGTTTTAAGTTTGTGTGAG+TGG + chr5.3:25492289-25492308 MS.gene58553:intron 30.0%
!!! TAGGGTTTGAATTTTGGTTT+TGG + chr5.3:25491048-25491067 MS.gene58553:intron 30.0%
!!! TGGAAATTGCTGTTTTTAGT+TGG + chr5.3:25491463-25491482 MS.gene58553:intron 30.0%
!!! TTTTCGGTTTTGCTGATTTT+TGG + chr5.3:25491000-25491019 MS.gene58553:intron 30.0%
AATAACAGATTGGCATTCAC+AGG - chr5.3:25493323-25493342 None:intergenic 35.0%
AATATGGAAATGCCAATGTC+TGG + chr5.3:25493482-25493501 MS.gene58553:CDS 35.0%
AATCATTCCAACAGAAAAGC+AGG - chr5.3:25492070-25492089 None:intergenic 35.0%
AGAAAGAGTTGTAAAGTGTG+TGG + chr5.3:25493178-25493197 MS.gene58553:intron 35.0%
AGAATGGTTATAGCCAAAGT+TGG - chr5.3:25492609-25492628 None:intergenic 35.0%
ATATATCCAGTCAACCTCTA+CGG - chr5.3:25494072-25494091 None:intergenic 35.0%
ATCCCAAACCAATAACAGAT+TGG - chr5.3:25493333-25493352 None:intergenic 35.0%
ATTCTCTCCAATTTCCAGAA+TGG - chr5.3:25494474-25494493 None:intergenic 35.0%
CTCAATGTAAAGTTCAATGC+GGG + chr5.3:25493028-25493047 MS.gene58553:intron 35.0%
CTCTTTATGGGAGATTATGT+AGG + chr5.3:25490858-25490877 MS.gene58553:CDS 35.0%
CTTTGCATACCATACTTTAG+GGG - chr5.3:25493827-25493846 None:intergenic 35.0%
GAAACATGAAACATCCAAAG+AGG - chr5.3:25494009-25494028 None:intergenic 35.0%
GAAATGGTCAAGATTTAGTC+AGG - chr5.3:25491898-25491917 None:intergenic 35.0%
GAACTTGAAACTTGTATGAG+AGG + chr5.3:25492342-25492361 MS.gene58553:intron 35.0%
GAGGTGAATTTGATGCATAT+AGG + chr5.3:25491086-25491105 MS.gene58553:intron 35.0%
GCATAAATTTATGCAGATCG+TGG + chr5.3:25492714-25492733 MS.gene58553:intron 35.0%
GGTAAAGAATTTCCAGACAT+TGG - chr5.3:25493497-25493516 None:intergenic 35.0%
GTGCAACACAATTAAGAAAC+AGG + chr5.3:25492199-25492218 MS.gene58553:intron 35.0%
TAACACAATACGGACAGAAA+TGG - chr5.3:25491914-25491933 None:intergenic 35.0%
TACACAATAGCACATTCACT+CGG - chr5.3:25493278-25493297 None:intergenic 35.0%
TCAATGTAAAGTTCAATGCG+GGG + chr5.3:25493029-25493048 MS.gene58553:intron 35.0%
TCTGGAAATTGGAGAGAATA+TGG + chr5.3:25494475-25494494 MS.gene58553:CDS 35.0%
TGATATGTAGTCAGCTAGTT+TGG + chr5.3:25491587-25491606 MS.gene58553:intron 35.0%
TGTGAATGCCAATCTGTTAT+TGG + chr5.3:25493322-25493341 MS.gene58553:intron 35.0%
TTATCCAGTGTATCCAAAGA+TGG - chr5.3:25493666-25493685 None:intergenic 35.0%
TTCTTAATTGTGTTGCACAC+CGG - chr5.3:25492197-25492216 None:intergenic 35.0%
TTTACCCTGACAGTGTTATA+TGG + chr5.3:25491800-25491819 MS.gene58553:intron 35.0%
! ATGCCAATCTGTTATTGGTT+TGG + chr5.3:25493327-25493346 MS.gene58553:intron 35.0%
! ATGTAATAAGGTGCCAACTT+TGG + chr5.3:25492593-25492612 MS.gene58553:intron 35.0%
! GGTTTGGGATGATATGAAAT+TGG + chr5.3:25493343-25493362 MS.gene58553:intron 35.0%
! TGCATATAGGGTGTGATTTT+TGG + chr5.3:25491099-25491118 MS.gene58553:intron 35.0%
! TTGCAGATTTTCTGTTTGCA+TGG + chr5.3:25493630-25493649 MS.gene58553:intron 35.0%
! TTGTGATGGAAGGATACAAT+TGG + chr5.3:25494290-25494309 MS.gene58553:CDS 35.0%
!! AATGGATAGTGGTTTTACCA+AGG + chr5.3:25493203-25493222 MS.gene58553:intron 35.0%
!! ACTCTTTTAGGAGAAGAATG+TGG + chr5.3:25494397-25494416 MS.gene58553:intron 35.0%
!! ATGGATAGTGGTTTTACCAA+GGG + chr5.3:25493204-25493223 MS.gene58553:intron 35.0%
!! TATTTTGAGGGAAGGTTATG+AGG + chr5.3:25492531-25492550 MS.gene58553:intron 35.0%
!! TGCCAATCTGTTATTGGTTT+GGG + chr5.3:25493328-25493347 MS.gene58553:intron 35.0%
!! TGGTGATGTTTGCTTTTATG+AGG + chr5.3:25491126-25491145 MS.gene58553:intron 35.0%
!!! GTTGGAGTCTTTTTTGGAAA+GGG + chr5.3:25491414-25491433 MS.gene58553:intron 35.0%
!!! GTTGGTTTTTGATGAGTGTT+TGG + chr5.3:25491243-25491262 MS.gene58553:intron 35.0%
!!! TGTTGGAGTCTTTTTTGGAA+AGG + chr5.3:25491413-25491432 MS.gene58553:intron 35.0%
AATGTAAAGTTCAATGCGGG+GGG + chr5.3:25493031-25493050 MS.gene58553:intron 40.0%
ACGGTTTGTGGTGATATTCA+TGG + chr5.3:25490774-25490793 MS.gene58553:CDS 40.0%
ATATCACCACAAACCGTAAC+AGG - chr5.3:25490771-25490790 None:intergenic 40.0%
ATTCCAACAGAAAAGCAGGA+GGG - chr5.3:25492066-25492085 None:intergenic 40.0%
CAAATTACTGCTACCGATGT+GGG + chr5.3:25494438-25494457 MS.gene58553:CDS 40.0%
CAATGTAAAGTTCAATGCGG+GGG + chr5.3:25493030-25493049 MS.gene58553:intron 40.0%
CCAGTAAGCGAATCAAAGAA+TGG - chr5.3:25492625-25492644 None:intergenic 40.0%
CGTAGAAACCATACCTGAAA+TGG - chr5.3:25493447-25493466 None:intergenic 40.0%
GCTCAGTTCAATCACACAAA+TGG + chr5.3:25494238-25494257 MS.gene58553:CDS 40.0%
GTTGTAAAGTGTGTGGTGAA+TGG + chr5.3:25493185-25493204 MS.gene58553:intron 40.0%
TCAAACCTGACTCTCAATGA+GGG - chr5.3:25493548-25493567 None:intergenic 40.0%
TCAATATAGGTTCCGCATGA+AGG + chr5.3:25494118-25494137 MS.gene58553:intron 40.0%
TTCAAACCTGACTCTCAATG+AGG - chr5.3:25493549-25493568 None:intergenic 40.0%
TTGTGTAGACGTGAATTACG+TGG + chr5.3:25493291-25493310 MS.gene58553:intron 40.0%
! AAGCAAAATTGTCACTTGCC+AGG - chr5.3:25494097-25494116 None:intergenic 40.0%
! AGTGGAGACTGTTTCACTTT+TGG + chr5.3:25492746-25492765 MS.gene58553:CDS 40.0%
! CAGATTTTCTGTTTGCATGG+AGG + chr5.3:25493633-25493652 MS.gene58553:intron 40.0%
! CCATTCTTTGATTCGCTTAC+TGG + chr5.3:25492622-25492641 MS.gene58553:intron 40.0%
!!! AGGGTGTGATTTTTGGTTCT+TGG + chr5.3:25491106-25491125 MS.gene58553:intron 40.0%
!!! ATTGAGCTTTTTCGGATTGG+TGG + chr5.3:25490813-25490832 MS.gene58553:CDS 40.0%
!!! CTGATTGAGCTTTTTCGGAT+TGG + chr5.3:25490810-25490829 MS.gene58553:CDS 40.0%
!!! TCGGTGTTGTGTTCGAATTT+TGG + chr5.3:25491335-25491354 MS.gene58553:intron 40.0%
AAGTGTCCTGTTACGGTTTG+TGG + chr5.3:25490762-25490781 MS.gene58553:CDS 45.0%
AGATCGTGGGTACTATTCAG+TGG + chr5.3:25492728-25492747 MS.gene58553:intron 45.0%
AGTGTGTGGTGAATGGATAG+TGG + chr5.3:25493192-25493211 MS.gene58553:intron 45.0%
AGTTACTATCACACCGTAGG+GGG + chr5.3:25492160-25492179 MS.gene58553:intron 45.0%
ATGTAAAGTTCAATGCGGGG+GGG + chr5.3:25493032-25493051 MS.gene58553:intron 45.0%
CAGTATTCTGGGTGATGTTG+TGG + chr5.3:25493124-25493143 MS.gene58553:intron 45.0%
CAGTTACTATCACACCGTAG+GGG + chr5.3:25492159-25492178 MS.gene58553:intron 45.0%
CATTCCAACAGAAAAGCAGG+AGG - chr5.3:25492067-25492086 None:intergenic 45.0%
CCAAATTACTGCTACCGATG+TGG + chr5.3:25494437-25494456 MS.gene58553:CDS 45.0%
CCACATCGGTAGCAGTAATT+TGG - chr5.3:25494440-25494459 None:intergenic 45.0%
CTCACCATCTTTGGATACAC+TGG + chr5.3:25493659-25493678 MS.gene58553:CDS 45.0%
GACCAATGTGTGATCTCTTG+TGG + chr5.3:25494140-25494159 MS.gene58553:CDS 45.0%
GACCACAAGAGATCACACAT+TGG - chr5.3:25494145-25494164 None:intergenic 45.0%
GAGCGATTCTTGTTGAGGAA+TGG + chr5.3:25490724-25490743 MS.gene58553:CDS 45.0%
GCAGTTACTATCACACCGTA+GGG + chr5.3:25492158-25492177 MS.gene58553:intron 45.0%
GGTTGACTGGATATATTGCC+TGG + chr5.3:25494076-25494095 MS.gene58553:intron 45.0%
TAGAGCTCATCAGCTTGTGA+TGG + chr5.3:25494276-25494295 MS.gene58553:CDS 45.0%
TCACACATTGGTCCTTCATG+CGG - chr5.3:25494133-25494152 None:intergenic 45.0%
TGACACTACACGAAAGACAC+CGG + chr5.3:25494544-25494563 MS.gene58553:CDS 45.0%
TGAGGAATGGAACGTTCAAC+CGG + chr5.3:25490737-25490756 MS.gene58553:CDS 45.0%
TGCAGTTACTATCACACCGT+AGG + chr5.3:25492157-25492176 MS.gene58553:intron 45.0%
TGCTGGATATACGTTTGGAC+AGG + chr5.3:25494207-25494226 MS.gene58553:CDS 45.0%
TGTTTCACTTGTACGCTCCA+TGG - chr5.3:25493232-25493251 None:intergenic 45.0%
TTCCAACAGAAAAGCAGGAG+GGG - chr5.3:25492065-25492084 None:intergenic 45.0%
! AACCTCTACGGCATGGTTTT+AGG - chr5.3:25494060-25494079 None:intergenic 45.0%
! ATGGCTGCCATTCTGGAAAT+TGG + chr5.3:25494464-25494483 MS.gene58553:CDS 45.0%
!! GGAGACTGTTTCACTTTTGG+TGG + chr5.3:25492749-25492768 MS.gene58553:CDS 45.0%
AACCTCCTGTATGCGATCCA+AGG - chr5.3:25493697-25493716 None:intergenic 50.0%
AACGTATATCCAGCACCACG+TGG - chr5.3:25494202-25494221 None:intergenic 50.0%
ACCGTAACAGGACACTTCAC+CGG - chr5.3:25490759-25490778 None:intergenic 50.0%
ACTGGATAATATCCGCGCCT+TGG + chr5.3:25493677-25493696 MS.gene58553:CDS 50.0%
AGCGAGAGCGATTCTTGTTG+AGG + chr5.3:25490719-25490738 MS.gene58553:CDS 50.0%
CATGGAGTGCAAGCCTTTAC+CGG + chr5.3:25490668-25490687 MS.gene58553:CDS 50.0%
CCATGTGCTCTATGCCTCTT+TGG + chr5.3:25493992-25494011 MS.gene58553:intron 50.0%
CTGCTACCGATGTGGGAATA+TGG + chr5.3:25494445-25494464 MS.gene58553:CDS 50.0%
GAGGCATAGAGCACATGGTA+AGG - chr5.3:25493990-25494009 None:intergenic 50.0%
GGTGTCTTTCGTGTAGTGTC+AGG - chr5.3:25494545-25494564 None:intergenic 50.0%
GTGTCAGGCTCAATTTGCCT+TGG - chr5.3:25494530-25494549 None:intergenic 50.0%
TCCAACAGAAAAGCAGGAGG+GGG - chr5.3:25492064-25492083 None:intergenic 50.0%
TGCAGTTTGATCCAGCTCCA+AGG + chr5.3:25494510-25494529 MS.gene58553:CDS 50.0%
TGCCTAAAACCATGCCGTAG+AGG + chr5.3:25494055-25494074 MS.gene58553:intron 50.0%
TGGAGGTCTCTCACCATCTT+TGG + chr5.3:25493650-25493669 MS.gene58553:CDS 50.0%
TGGCAGCCATATTCCCACAT+CGG - chr5.3:25494454-25494473 None:intergenic 50.0%
TGGGAATATGGCTGCCATTC+TGG + chr5.3:25494457-25494476 MS.gene58553:CDS 50.0%
! ACCGGTGAAGTGTCCTGTTA+CGG + chr5.3:25490755-25490774 MS.gene58553:CDS 50.0%
! CCAAAGAGGCATAGAGCACA+TGG - chr5.3:25493995-25494014 None:intergenic 50.0%
! CGTGGTGCTGGATATACGTT+TGG + chr5.3:25494202-25494221 MS.gene58553:CDS 50.0%
! GCTCATCAGCTTGTGATGGA+AGG + chr5.3:25494280-25494299 MS.gene58553:CDS 50.0%
! GGAAGGATACAATTGGTGCC+AGG + chr5.3:25494297-25494316 MS.gene58553:CDS 50.0%
!! TCGGATTGGTGGAAATGCTC+CGG + chr5.3:25490824-25490843 MS.gene58553:CDS 50.0%
!!! TGGTTTTACCAAGGGCACCA+TGG + chr5.3:25493212-25493231 MS.gene58553:intron 50.0%
AAGTTCAATGCGGGGGGGTT+CGG + chr5.3:25493037-25493056 MS.gene58553:intron 55.0%
ACCATGCCGTAGAGGTTGAC+TGG + chr5.3:25494063-25494082 MS.gene58553:intron 55.0%
ACCCAGACGATCGTTGTGGT+TGG + chr5.3:25494167-25494186 MS.gene58553:CDS 55.0%
ACTATCACACCGTAGGGGGT+TGG + chr5.3:25492164-25492183 MS.gene58553:intron 55.0%
AGTGTTACGGGTCAGTCACC+TGG - chr5.3:25494318-25494337 None:intergenic 55.0%
CCAGACGATCGTTGTGGTTG+GGG + chr5.3:25494169-25494188 MS.gene58553:CDS 55.0%
CCCAACCACAACGATCGTCT+GGG - chr5.3:25494171-25494190 None:intergenic 55.0%
CCCAGACGATCGTTGTGGTT+GGG + chr5.3:25494168-25494187 MS.gene58553:CDS 55.0%
CTATCACACCGTAGGGGGTT+GGG + chr5.3:25492165-25492184 MS.gene58553:intron 55.0%
CTCTCAATGAGGGCAGTCAG+AGG - chr5.3:25493538-25493557 None:intergenic 55.0%
GACTGCCCTCATTGAGAGTC+AGG + chr5.3:25493540-25493559 MS.gene58553:CDS 55.0%
GGCTCAATTTGCCTTGGAGC+TGG - chr5.3:25494524-25494543 None:intergenic 55.0%
GGTATATCTCCACGTGGTGC+TGG + chr5.3:25494190-25494209 MS.gene58553:CDS 55.0%
GGTTGGGGTATATCTCCACG+TGG + chr5.3:25494184-25494203 MS.gene58553:CDS 55.0%
TATCACACCGTAGGGGGTTG+GGG + chr5.3:25492166-25492185 MS.gene58553:intron 55.0%
TCCAGTCAACCTCTACGGCA+TGG - chr5.3:25494067-25494086 None:intergenic 55.0%
TCGGCAGATCGAGAGTCTCA+TGG + chr5.3:25490650-25490669 MS.gene58553:CDS 55.0%
TCTGACCCAGACGATCGTTG+TGG + chr5.3:25494163-25494182 MS.gene58553:CDS 55.0%
TTCACATCCGCCTCCGGTAA+AGG - chr5.3:25490684-25490703 None:intergenic 55.0%
TTTACCGGAGGCGGATGTGA+AGG + chr5.3:25490683-25490702 MS.gene58553:CDS 55.0%
CCCCAACCACAACGATCGTC+TGG - chr5.3:25494172-25494191 None:intergenic 60.0%
CCTGTATGCGATCCAAGGCG+CGG - chr5.3:25493692-25493711 None:intergenic 60.0%
CGATCCAGATCCGCGTGTGA+CGG - chr5.3:25490633-25490652 None:intergenic 60.0%
CGCCTTGGATCGCATACAGG+AGG + chr5.3:25493692-25493711 MS.gene58553:CDS 60.0%
CGTCACACGCGGATCTGGAT+CGG + chr5.3:25490631-25490650 MS.gene58553:CDS 60.0%
GGAGTGCAAGCCTTTACCGG+AGG + chr5.3:25490671-25490690 MS.gene58553:CDS 60.0%
GTGCAAGCCTTTACCGGAGG+CGG + chr5.3:25490674-25490693 MS.gene58553:CDS 60.0%
TGTACGCTCCATGGTGCCCT+TGG - chr5.3:25493223-25493242 None:intergenic 60.0%
!! GCCCCCTCCTGCTTTTCTGT+TGG + chr5.3:25492060-25492079 MS.gene58553:intron 60.0%
AGCGCCTTCACATCCGCCTC+CGG - chr5.3:25490690-25490709 None:intergenic 65.0%
CCGCGCCTTGGATCGCATAC+AGG + chr5.3:25493689-25493708 MS.gene58553:CDS 65.0%
! CAATGCGGGGGGGTTCGGTT+AGG + chr5.3:25493042-25493061 MS.gene58553:intron 65.0%
CACACCGTAGGGGGTTGGGG+TGG + chr5.3:25492169-25492188 MS.gene58553:intron 70.0%
GGCACCACCCCAACCCCCTA+CGG - chr5.3:25492176-25492195 None:intergenic 70.0%
GTAGGGGGTTGGGGTGGTGC+CGG + chr5.3:25492175-25492194 MS.gene58553:intron 70.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 25490627 25494580 25490627 ID=MS.gene58553
chr5.3 mRNA 25490627 25494580 25490627 ID=MS.gene58553.t1;Parent=MS.gene58553
chr5.3 exon 25490627 25490879 25490627 ID=MS.gene58553.t1.exon1;Parent=MS.gene58553.t1
chr5.3 CDS 25490627 25490879 25490627 ID=cds.MS.gene58553.t1;Parent=MS.gene58553.t1
chr5.3 exon 25492730 25492844 25492730 ID=MS.gene58553.t1.exon2;Parent=MS.gene58553.t1
chr5.3 CDS 25492730 25492844 25492730 ID=cds.MS.gene58553.t1;Parent=MS.gene58553.t1
chr5.3 exon 25493453 25493561 25493453 ID=MS.gene58553.t1.exon3;Parent=MS.gene58553.t1
chr5.3 CDS 25493453 25493561 25493453 ID=cds.MS.gene58553.t1;Parent=MS.gene58553.t1
chr5.3 exon 25493636 25493713 25493636 ID=MS.gene58553.t1.exon4;Parent=MS.gene58553.t1
chr5.3 CDS 25493636 25493713 25493636 ID=cds.MS.gene58553.t1;Parent=MS.gene58553.t1
chr5.3 exon 25494127 25494318 25494127 ID=MS.gene58553.t1.exon5;Parent=MS.gene58553.t1
chr5.3 CDS 25494127 25494318 25494127 ID=cds.MS.gene58553.t1;Parent=MS.gene58553.t1
chr5.3 exon 25494407 25494580 25494407 ID=MS.gene58553.t1.exon6;Parent=MS.gene58553.t1
chr5.3 CDS 25494407 25494580 25494407 ID=cds.MS.gene58553.t1;Parent=MS.gene58553.t1
Gene Sequence

>MS.gene58553

ATGCCGTCACACGCGGATCTGGATCGGCAGATCGAGAGTCTCATGGAGTGCAAGCCTTTACCGGAGGCGGATGTGAAGGCGCTATGCGATCAAGCGAGAGCGATTCTTGTTGAGGAATGGAACGTTCAACCGGTGAAGTGTCCTGTTACGGTTTGTGGTGATATTCATGGTCAATTTTATGATCTGATTGAGCTTTTTCGGATTGGTGGAAATGCTCCGGATACTAATTATCTCTTTATGGGAGATTATGTAGGTTAGTTTCTTGAATTCGATTCTTAAAATTCCTAATTTTTTGTTTTCTTGAGGTTAATTTGATTTATTTAGGGTTTGATTATTGGTTTTATGAGGTTAATTTGATTTATATAGTGTTTTGTTTTCGGTTTTGCTGATTTTTGGTTTTATGAGCTGAATTAGATGTATATAGGGTTTGAATTTTGGTTTTGGTATTTCTTGGTTTATGAGGTGAATTTGATGCATATAGGGTGTGATTTTTGGTTCTTGGTGATGTTTGCTTTTATGAGGTGAATTTTATGTATATAAGGTTTGATTTTTTTATTTTGGTAATTTTTGTTCTTGAGATGAATTATTGGTTTTGTGTTGTATTTGAGTCTATTTTGTTGGTTTTTGATGAGTGTTTGGTAGTTATATTTGTAGATAGTTATTTCAGTTTTATAAGGTGAATTGATGTATATTGAGTTTGATATATTATCGGTGTTGTGTTCGAATTTTGGTAGTTTTTTTTGTTTTATAGTTTAATTTGATATTGTAATAATTGCTTCTTTTATATGTTGGAGTCTTTTTTGGAAAGGGTTTTGTTTATGATGTTTTCTGAAAAATGGAAATTGCTGTTTTTAGTTGGTTGTATTTGTTTGACTAATTGGTGAGTGATTGTGTAAAATTGTCATGTTTGTTGTGTAACTGTTGAAGCAACATGATTTAGATGCTTCTTTCGCTGTTTATTGATATGTAGTCAGCTAGTTTGGATCAATATCAAAGCAATGTCGAGATCATGTGATTAGTCAAATTTTGTAGTTTAATTTTGATACGGTGTAGAAAGTTTTGCCCTTTCAACAAATCACAACCAATCATATGTTTGATTTTAGAAGTAGTTTTGATCAAAGTCAAACATTTCAAATGATCAGTCGATTACGACTGATTGACAGTGTAAAAATCTTTACCCTGACAGTGTTATATGGATTAAGTACTAACTTTTTTTTTTTTTTTAATAAATGTCACGCTAGTTTGTTTTATGCATGTTTTATTAGTTGCCTGACTAAATCTTGACCATTTCTGTCCGTATTGTGTTATAATTTATAGCTTCATGTCACTGTTGAAATGTATAATATCCTCATTTTTTCAGATCTTGGTTTTAGTTATGTGCCATTTGTTTAAAGGAGAATTGTTTGATAAAACTTGTCTTTTTATTTTTCTTGGCCCCCTCCTGCTTTTCTGTTGGAATGATTGTTAATGTTATTCATGTATGATAGAATTTTTGGTTTGGAATTGGATATACATATCATTTTATGGGAGTGCAGTTACTATCACACCGTAGGGGGTTGGGGTGGTGCCGGTGTGCAACACAATTAAGAAACAGGGAGATATAAGTTTGAGCTCAAAAAATTGGATAAATGTAAAATAGTCTTGCTAGTTGTGAATTTCTTAATGTTTTAAGTTTGTGTGAGTGGCAAGTGATGACAAAAGAGAGATTGTTCAATGAACTTGAAACTTGTATGAGAGGATTTTATAGGATAAATGTCAGTGCTAAGTGAAGTTCTATTGTCAAAGTGTCTATATTTTAACGGAATTTGCTGATAGCATAAAAATGACATAAGTGTGATAGCATAAAAATGACATAAGTGACATATGTTTGTATTGAGGTATCAAAATTGAGTGTTACTGTAATATATTTTGAGGGAAGGTTATGAGGCTTAACAACTTCAATATCTGAGGATGTTACTAGATTCAGATGTAATAAGGTGCCAACTTTGGCTATAACCATTCTTTGATTCGCTTACTGGATTTAATTATTATGTTCAAATTAGATTATTTGCATCTGTGGGAACCACTACAATTTCCTAATAATTCTGGCATAAATTTATGCAGATCGTGGGTACTATTCAGTGGAGACTGTTTCACTTTTGGTGGCACTGAAAGTACGCTATAGAGATAGAATTACAATTCTCAGGGGAAATCATGAGAGCCGTCAAATTACTCAAGTGTAAGAACACTTTCTTCTCAAATTACTCATTGCTATTTGCGTATATAAATATTATCATGTTTAAGCTGAAGTTTCATTATAATTCTTGCTTAAAGTTTAAGAATAGGTTAATGATGAGCATCTCCAATTACTCCATTCATTGTGTTTGTGTTTTATAACTTTCTGCTGGCTCCATCCATCTATCTCAATGTAAAGTTCAATGCGGGGGGGTTCGGTTAGGAGCCGCAACTTGATTTTTTGCAATCATATTATGATATTCTTAATTTTCTATATCTTTCTCAGTATTCTGGGTGATGTTGTGGATAGTGTTTTAGTGAGTTTTTAAGGCTTTAGAGAAAGAGTTGTAAAGTGTGTGGTGAATGGATAGTGGTTTTACCAAGGGCACCATGGAGCGTACAAGTGAAACATCATATCTGGCTTGTGTGCGTATCCGAGTGAATGTGCTATTGTGTAGACGTGAATTACGTGGTTCATGCCTGTGAATGCCAATCTGTTATTGGTTTGGGATGATATGAAATTGGAAAAGAGAAAAATGTAATCTTTGAATATAAGAAACATAAAAGGAATTTTATTTTGGAAGTTGTTAATTTGTTTTCTTACCATTTCAGGTATGGTTTCTACGATGAATGCTTGAGAAAATATGGAAATGCCAATGTCTGGAAATTCTTTACCGATTTGTTTGATTATTTACCTCTGACTGCCCTCATTGAGAGTCAGGTTTGAACTTCAATATGTTTCAAAATGTTTCTCTGATTTCTTTATGCCATTGTCTAACACCTTTTTTATTGCAGATTTTCTGTTTGCATGGAGGTCTCTCACCATCTTTGGATACACTGGATAATATCCGCGCCTTGGATCGCATACAGGAGGTTTGTGTGTTATTAAATGGCTATTATAACTGGCAATATCTTACCATGTAAATTATTTGATACTAAGAACATTTTTATGGAAAGCATGTTCCAAGTTAAAGATCTTTTTTCCCCTAAAGTATGGTATGCAAAGTAATATATTTTATTTGATATTTCAACTTGCAATTCTTCGTTGTAGTTTGTAATTGCTTTCATGTTTCATTTTGTCGATAGTTTAGAAAGTTGTCTGCATTTTTCTTTTTGGTTGAATCAACTATTAATTATTTGCTTCAGCCTTACCATGTGCTCTATGCCTCTTTGGATGTTTCATGTTTCCCTCATTTAATATTTCATTTCTGTATTGCCTAAAACCATGCCGTAGAGGTTGACTGGATATATTGCCTGGCAAGTGACAATTTTGCTTTTCAATATAGGTTCCGCATGAAGGACCAATGTGTGATCTCTTGTGGTCTGACCCAGACGATCGTTGTGGTTGGGGTATATCTCCACGTGGTGCTGGATATACGTTTGGACAGGATATAGCTGCTCAGTTCAATCACACAAATGGTCTCTCGCTGATATCTAGAGCTCATCAGCTTGTGATGGAAGGATACAATTGGTGCCAGGTGACTGACCCGTAACACTTAGATTGATTCATTTCAAGGATACTTATTACGCTCTATGTATTGACTGTCTTTTTTATTACTCTTTTAGGAGAAGAATGTGGTGACTGTTTTTAGTGCTCCAAATTACTGCTACCGATGTGGGAATATGGCTGCCATTCTGGAAATTGGAGAGAATATGGATCAGAATTTTCTGCAGTTTGATCCAGCTCCAAGGCAAATTGAGCCTGACACTACACGAAAGACACCGGATTATTTTTTGTAA
Protein sequence

>MS.gene58553.t1

MPSHADLDRQIESLMECKPLPEADVKALCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKFFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAAQFNHTNGLSLISRAHQLVMEGYNWCQEKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL