Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30551.t1 | XP_013456159.1 | 94.4 | 267 | 15 | 0 | 1 | 267 | 1 | 267 | 1.50E-137 | 498.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30551.t1 | Q9ZW04 | 65.2 | 264 | 88 | 2 | 1 | 263 | 1 | 261 | 1.4e-91 | 337.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30551.t1 | I3SNR4 | 94.4 | 267 | 15 | 0 | 1 | 267 | 1 | 267 | 1.1e-137 | 498.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30551.t1 | MTR_4g064887 | 94.382 | 267 | 15 | 0 | 1 | 267 | 1 | 267 | 0.0 | 518 |
MS.gene30551.t1 | MTR_4g064887 | 92.823 | 209 | 15 | 0 | 1 | 209 | 1 | 209 | 2.51e-144 | 404 |
MS.gene30551.t1 | MTR_3g068155 | 61.004 | 259 | 101 | 0 | 3 | 261 | 7 | 265 | 3.88e-121 | 347 |
MS.gene30551.t1 | MTR_3g068070 | 59.160 | 262 | 107 | 0 | 1 | 262 | 1 | 262 | 1.16e-118 | 340 |
MS.gene30551.t1 | MTR_3g068175 | 62.302 | 252 | 95 | 0 | 11 | 262 | 13 | 264 | 1.01e-117 | 338 |
MS.gene30551.t1 | MTR_4g064883 | 62.451 | 253 | 95 | 0 | 10 | 262 | 9 | 261 | 7.93e-116 | 333 |
MS.gene30551.t1 | MTR_3g068175 | 61.328 | 256 | 95 | 1 | 11 | 262 | 13 | 268 | 2.51e-115 | 332 |
MS.gene30551.t1 | MTR_3g068085 | 59.542 | 262 | 106 | 0 | 1 | 262 | 1 | 262 | 3.97e-113 | 327 |
MS.gene30551.t1 | MTR_3g068065 | 59.677 | 248 | 100 | 0 | 15 | 262 | 17 | 264 | 1.25e-110 | 320 |
MS.gene30551.t1 | MTR_7g063270 | 56.818 | 264 | 110 | 2 | 1 | 260 | 1 | 264 | 4.82e-109 | 316 |
MS.gene30551.t1 | MTR_7g063390 | 55.805 | 267 | 111 | 3 | 1 | 261 | 1 | 266 | 3.38e-105 | 306 |
MS.gene30551.t1 | MTR_7g063260 | 55.094 | 265 | 114 | 2 | 1 | 260 | 1 | 265 | 2.75e-104 | 304 |
MS.gene30551.t1 | MTR_7g063320 | 53.962 | 265 | 118 | 2 | 1 | 261 | 1 | 265 | 1.01e-101 | 297 |
MS.gene30551.t1 | MTR_7g063360 | 54.135 | 266 | 117 | 3 | 1 | 261 | 1 | 266 | 3.60e-101 | 296 |
MS.gene30551.t1 | MTR_7g063330 | 53.232 | 263 | 120 | 1 | 1 | 260 | 1 | 263 | 1.32e-98 | 289 |
MS.gene30551.t1 | MTR_4g064883 | 62.000 | 200 | 76 | 0 | 10 | 209 | 9 | 208 | 3.53e-87 | 258 |
MS.gene30551.t1 | MTR_7g063270 | 49.242 | 264 | 81 | 4 | 1 | 260 | 1 | 215 | 1.62e-82 | 247 |
MS.gene30551.t1 | MTR_4g132850 | 32.927 | 246 | 160 | 4 | 15 | 259 | 7 | 248 | 2.61e-33 | 122 |
MS.gene30551.t1 | MTR_3g085740 | 33.333 | 246 | 153 | 7 | 21 | 261 | 81 | 320 | 9.19e-29 | 111 |
MS.gene30551.t1 | MTR_7g094510 | 32.400 | 250 | 161 | 5 | 15 | 258 | 6 | 253 | 1.14e-26 | 104 |
MS.gene30551.t1 | MTR_8g442750 | 30.888 | 259 | 158 | 6 | 15 | 259 | 14 | 265 | 9.25e-26 | 103 |
MS.gene30551.t1 | MTR_4g131740 | 29.434 | 265 | 175 | 6 | 8 | 263 | 33 | 294 | 4.35e-25 | 101 |
MS.gene30551.t1 | MTR_7g094520 | 29.880 | 251 | 168 | 4 | 15 | 259 | 11 | 259 | 9.78e-25 | 99.8 |
MS.gene30551.t1 | MTR_4g052350 | 31.518 | 257 | 155 | 11 | 15 | 261 | 14 | 259 | 7.86e-23 | 94.7 |
MS.gene30551.t1 | MTR_4g058840 | 28.346 | 254 | 175 | 5 | 15 | 261 | 11 | 264 | 1.26e-21 | 91.7 |
MS.gene30551.t1 | MTR_4g058820 | 28.346 | 254 | 175 | 5 | 15 | 261 | 11 | 264 | 1.26e-21 | 91.7 |
MS.gene30551.t1 | MTR_4g058810 | 27.953 | 254 | 176 | 5 | 15 | 261 | 11 | 264 | 4.20e-21 | 90.1 |
MS.gene30551.t1 | MTR_4g052340 | 30.189 | 265 | 150 | 12 | 15 | 262 | 14 | 260 | 7.34e-21 | 89.4 |
MS.gene30551.t1 | MTR_7g105460 | 28.889 | 270 | 174 | 9 | 1 | 261 | 1 | 261 | 9.25e-21 | 89.4 |
MS.gene30551.t1 | MTR_4g052320 | 30.303 | 264 | 160 | 9 | 10 | 261 | 3 | 254 | 2.34e-20 | 88.2 |
MS.gene30551.t1 | MTR_1g051165 | 25.769 | 260 | 179 | 6 | 15 | 261 | 14 | 272 | 2.91e-20 | 88.2 |
MS.gene30551.t1 | MTR_7g113650 | 29.572 | 257 | 170 | 6 | 15 | 263 | 40 | 293 | 3.20e-20 | 88.2 |
MS.gene30551.t1 | MTR_6g023990 | 28.195 | 266 | 180 | 7 | 1 | 259 | 1 | 262 | 4.06e-20 | 87.4 |
MS.gene30551.t1 | MTR_3g020670 | 30.769 | 273 | 164 | 10 | 5 | 260 | 6 | 270 | 4.95e-20 | 87.4 |
MS.gene30551.t1 | MTR_1196s0010 | 31.148 | 244 | 153 | 10 | 20 | 258 | 279 | 512 | 9.70e-20 | 88.6 |
MS.gene30551.t1 | MTR_7g071680 | 27.491 | 291 | 173 | 8 | 6 | 266 | 20 | 302 | 2.93e-19 | 85.5 |
MS.gene30551.t1 | MTR_6g023610 | 28.679 | 265 | 175 | 7 | 1 | 257 | 1 | 259 | 3.74e-19 | 84.7 |
MS.gene30551.t1 | MTR_6g023590 | 28.571 | 266 | 178 | 7 | 1 | 259 | 1 | 261 | 3.77e-19 | 84.7 |
MS.gene30551.t1 | MTR_1g068955 | 31.907 | 257 | 152 | 8 | 15 | 257 | 14 | 261 | 4.11e-19 | 85.1 |
MS.gene30551.t1 | MTR_1g082760 | 28.516 | 256 | 172 | 6 | 15 | 262 | 40 | 292 | 7.48e-19 | 84.3 |
MS.gene30551.t1 | MTR_4g052300 | 27.027 | 259 | 174 | 6 | 10 | 261 | 3 | 253 | 4.53e-18 | 81.6 |
MS.gene30551.t1 | MTR_2g090165 | 28.195 | 266 | 171 | 9 | 11 | 264 | 2 | 259 | 8.46e-18 | 80.9 |
MS.gene30551.t1 | MTR_6g023600 | 28.947 | 266 | 177 | 7 | 1 | 259 | 1 | 261 | 8.71e-18 | 80.9 |
MS.gene30551.t1 | MTR_4g078630 | 28.214 | 280 | 161 | 12 | 5 | 260 | 8 | 271 | 1.52e-17 | 80.5 |
MS.gene30551.t1 | MTR_1579s0020 | 43.750 | 80 | 44 | 1 | 181 | 260 | 1 | 79 | 1.66e-17 | 75.9 |
MS.gene30551.t1 | MTR_6g023910 | 27.273 | 264 | 180 | 7 | 1 | 257 | 1 | 259 | 3.09e-17 | 79.7 |
MS.gene30551.t1 | MTR_7g083870 | 27.376 | 263 | 164 | 6 | 15 | 260 | 35 | 287 | 9.52e-17 | 78.6 |
MS.gene30551.t1 | MTR_6g023950 | 28.571 | 266 | 178 | 7 | 1 | 259 | 1 | 261 | 5.05e-16 | 76.3 |
MS.gene30551.t1 | MTR_7g110160 | 28.125 | 256 | 158 | 7 | 11 | 261 | 2 | 236 | 7.02e-16 | 75.5 |
MS.gene30551.t1 | MTR_6g023600 | 28.195 | 266 | 173 | 7 | 1 | 259 | 1 | 255 | 1.61e-15 | 74.7 |
MS.gene30551.t1 | MTR_7g080410 | 28.646 | 192 | 119 | 4 | 22 | 202 | 45 | 229 | 3.43e-15 | 74.3 |
MS.gene30551.t1 | MTR_7g080410 | 28.646 | 192 | 119 | 4 | 22 | 202 | 45 | 229 | 3.55e-15 | 74.3 |
MS.gene30551.t1 | MTR_7g110130 | 26.641 | 259 | 177 | 8 | 11 | 261 | 2 | 255 | 3.93e-15 | 73.6 |
MS.gene30551.t1 | MTR_7g105570 | 30.508 | 177 | 110 | 5 | 94 | 261 | 46 | 218 | 5.44e-15 | 72.8 |
MS.gene30551.t1 | MTR_7g107670 | 25.283 | 265 | 180 | 6 | 8 | 260 | 26 | 284 | 8.64e-15 | 73.2 |
MS.gene30551.t1 | MTR_6g041980 | 30.435 | 253 | 148 | 10 | 15 | 250 | 64 | 305 | 6.68e-14 | 70.9 |
MS.gene30551.t1 | MTR_4g058830 | 27.922 | 154 | 107 | 3 | 112 | 261 | 57 | 210 | 1.21e-13 | 68.6 |
MS.gene30551.t1 | MTR_7g110140 | 28.736 | 261 | 168 | 10 | 11 | 261 | 2 | 254 | 4.21e-13 | 67.8 |
MS.gene30551.t1 | MTR_7g105590 | 26.596 | 188 | 133 | 4 | 15 | 200 | 8 | 192 | 2.49e-12 | 64.7 |
MS.gene30551.t1 | MTR_7g105580 | 24.715 | 263 | 161 | 8 | 15 | 265 | 8 | 245 | 3.59e-12 | 65.1 |
MS.gene30551.t1 | MTR_6g041980 | 33.333 | 159 | 99 | 5 | 5 | 160 | 54 | 208 | 6.24e-12 | 64.7 |
MS.gene30551.t1 | MTR_7g053290 | 31.148 | 183 | 117 | 7 | 82 | 259 | 192 | 370 | 3.22e-11 | 63.2 |
MS.gene30551.t1 | MTR_6g035395 | 25.882 | 255 | 168 | 7 | 12 | 261 | 2 | 240 | 9.13e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene30551.t1 | AT1G07440 | 63.602 | 261 | 94 | 1 | 7 | 267 | 4 | 263 | 1.05e-122 | 350 |
MS.gene30551.t1 | AT2G29150 | 64.259 | 263 | 92 | 2 | 1 | 262 | 1 | 262 | 8.49e-120 | 343 |
MS.gene30551.t1 | AT5G06060 | 61.265 | 253 | 98 | 0 | 10 | 262 | 4 | 256 | 3.50e-119 | 342 |
MS.gene30551.t1 | AT2G29350 | 64.122 | 262 | 93 | 1 | 1 | 262 | 1 | 261 | 1.90e-118 | 340 |
MS.gene30551.t1 | AT2G29340 | 61.240 | 258 | 100 | 0 | 10 | 267 | 2 | 259 | 2.03e-118 | 340 |
MS.gene30551.t1 | AT2G29340 | 61.240 | 258 | 100 | 0 | 10 | 267 | 2 | 259 | 8.61e-118 | 340 |
MS.gene30551.t1 | AT2G29290 | 63.178 | 258 | 95 | 0 | 10 | 267 | 2 | 259 | 1.59e-117 | 337 |
MS.gene30551.t1 | AT2G29360 | 64.259 | 263 | 93 | 1 | 1 | 262 | 1 | 263 | 1.59e-117 | 338 |
MS.gene30551.t1 | AT2G30670 | 61.660 | 253 | 97 | 0 | 10 | 262 | 2 | 254 | 8.88e-116 | 333 |
MS.gene30551.t1 | AT2G29310 | 60.000 | 255 | 102 | 0 | 10 | 264 | 2 | 256 | 3.28e-112 | 324 |
MS.gene30551.t1 | AT2G29370 | 61.597 | 263 | 100 | 1 | 1 | 262 | 1 | 263 | 2.44e-111 | 322 |
MS.gene30551.t1 | AT1G07450 | 63.347 | 251 | 91 | 1 | 12 | 262 | 5 | 254 | 1.79e-110 | 319 |
MS.gene30551.t1 | AT2G29260 | 59.363 | 251 | 102 | 0 | 12 | 262 | 65 | 315 | 5.93e-110 | 320 |
MS.gene30551.t1 | AT2G29330 | 57.752 | 258 | 109 | 0 | 10 | 267 | 2 | 259 | 2.97e-109 | 316 |
MS.gene30551.t1 | AT2G29320 | 58.203 | 256 | 106 | 1 | 13 | 267 | 11 | 266 | 1.42e-107 | 312 |
MS.gene30551.t1 | AT2G29300 | 57.708 | 253 | 106 | 1 | 10 | 261 | 2 | 254 | 3.55e-106 | 308 |
MS.gene30551.t1 | AT2G29290 | 63.913 | 230 | 83 | 0 | 33 | 262 | 8 | 237 | 4.15e-105 | 305 |
MS.gene30551.t1 | AT2G29300 | 57.540 | 252 | 106 | 1 | 10 | 260 | 2 | 253 | 7.66e-105 | 306 |
MS.gene30551.t1 | AT2G29350 | 64.126 | 223 | 79 | 1 | 40 | 262 | 2 | 223 | 4.67e-101 | 294 |
MS.gene30551.t1 | AT2G29310 | 59.914 | 232 | 93 | 0 | 31 | 262 | 21 | 252 | 3.77e-99 | 291 |
MS.gene30551.t1 | AT2G29320 | 56.723 | 238 | 102 | 1 | 31 | 267 | 11 | 248 | 6.02e-96 | 282 |
MS.gene30551.t1 | AT2G29350 | 64.423 | 208 | 74 | 0 | 1 | 208 | 1 | 208 | 2.37e-92 | 272 |
MS.gene30551.t1 | AT2G29340 | 58.000 | 200 | 84 | 0 | 10 | 209 | 2 | 201 | 1.77e-85 | 254 |
MS.gene30551.t1 | AT2G29340 | 58.000 | 200 | 84 | 0 | 10 | 209 | 2 | 201 | 1.77e-85 | 254 |
MS.gene30551.t1 | AT2G29310 | 56.500 | 200 | 87 | 0 | 10 | 209 | 2 | 201 | 4.06e-81 | 243 |
MS.gene30551.t1 | AT2G29320 | 56.545 | 191 | 82 | 1 | 13 | 202 | 11 | 201 | 1.22e-75 | 229 |
MS.gene30551.t1 | AT1G07440 | 60.843 | 166 | 65 | 0 | 7 | 172 | 4 | 169 | 1.38e-71 | 218 |
MS.gene30551.t1 | AT2G29310 | 55.307 | 179 | 80 | 0 | 31 | 209 | 21 | 199 | 4.43e-68 | 209 |
MS.gene30551.t1 | AT2G29170 | 62.745 | 102 | 37 | 1 | 1 | 101 | 1 | 102 | 1.41e-38 | 131 |
MS.gene30551.t1 | AT4G05530 | 31.707 | 246 | 163 | 4 | 15 | 259 | 9 | 250 | 2.63e-30 | 114 |
MS.gene30551.t1 | AT3G03980 | 31.852 | 270 | 163 | 7 | 5 | 258 | 4 | 268 | 7.67e-29 | 110 |
MS.gene30551.t1 | AT3G55310 | 30.078 | 256 | 168 | 7 | 15 | 261 | 17 | 270 | 4.42e-27 | 106 |
MS.gene30551.t1 | AT1G24360 | 32.377 | 244 | 158 | 6 | 21 | 261 | 80 | 319 | 1.10e-26 | 106 |
MS.gene30551.t1 | AT4G13180 | 31.061 | 264 | 172 | 7 | 5 | 261 | 3 | 263 | 1.13e-26 | 105 |
MS.gene30551.t1 | AT1G63380 | 30.739 | 257 | 166 | 7 | 15 | 261 | 15 | 269 | 8.68e-26 | 102 |
MS.gene30551.t1 | AT1G63380 | 30.739 | 257 | 166 | 7 | 15 | 261 | 17 | 271 | 8.74e-26 | 103 |
MS.gene30551.t1 | AT1G63380 | 30.739 | 257 | 166 | 7 | 15 | 261 | 19 | 273 | 1.10e-25 | 102 |
MS.gene30551.t1 | AT3G55290 | 29.297 | 256 | 170 | 7 | 15 | 261 | 17 | 270 | 1.37e-25 | 102 |
MS.gene30551.t1 | AT3G04000 | 31.321 | 265 | 162 | 8 | 15 | 265 | 14 | 272 | 1.38e-25 | 102 |
MS.gene30551.t1 | AT1G63380 | 30.739 | 257 | 166 | 7 | 15 | 261 | 22 | 276 | 1.39e-25 | 102 |
MS.gene30551.t1 | AT3G55290 | 29.297 | 256 | 170 | 7 | 15 | 261 | 18 | 271 | 1.54e-25 | 102 |
MS.gene30551.t1 | AT1G54870 | 32.443 | 262 | 154 | 10 | 15 | 262 | 82 | 334 | 8.83e-25 | 101 |
MS.gene30551.t1 | AT5G18210 | 30.000 | 260 | 161 | 7 | 14 | 259 | 7 | 259 | 9.72e-25 | 99.8 |
MS.gene30551.t1 | AT1G54870 | 32.443 | 262 | 154 | 10 | 15 | 262 | 84 | 336 | 1.10e-24 | 101 |
MS.gene30551.t1 | AT3G05260 | 32.707 | 266 | 165 | 8 | 7 | 262 | 27 | 288 | 1.75e-24 | 99.8 |
MS.gene30551.t1 | AT3G12800 | 28.346 | 254 | 172 | 4 | 15 | 259 | 10 | 262 | 2.00e-24 | 99.8 |
MS.gene30551.t1 | AT1G62610 | 29.961 | 257 | 168 | 7 | 15 | 261 | 13 | 267 | 2.74e-24 | 99.0 |
MS.gene30551.t1 | AT1G62610 | 29.961 | 257 | 168 | 7 | 15 | 261 | 19 | 273 | 2.93e-24 | 99.0 |
MS.gene30551.t1 | AT1G62610 | 29.961 | 257 | 168 | 7 | 15 | 261 | 15 | 269 | 2.96e-24 | 99.0 |
MS.gene30551.t1 | AT1G62610 | 29.961 | 257 | 168 | 7 | 15 | 261 | 14 | 268 | 3.00e-24 | 99.0 |
MS.gene30551.t1 | AT5G18210 | 30.165 | 242 | 148 | 7 | 14 | 241 | 7 | 241 | 1.09e-21 | 92.0 |
MS.gene30551.t1 | AT2G17845 | 27.734 | 256 | 171 | 7 | 15 | 258 | 47 | 300 | 5.44e-21 | 90.5 |
MS.gene30551.t1 | AT3G46170 | 27.344 | 256 | 175 | 7 | 15 | 261 | 26 | 279 | 6.48e-21 | 90.1 |
MS.gene30551.t1 | AT2G47120 | 28.125 | 256 | 174 | 9 | 11 | 261 | 2 | 252 | 5.90e-20 | 86.7 |
MS.gene30551.t1 | AT2G47120 | 28.175 | 252 | 171 | 9 | 15 | 261 | 7 | 253 | 9.20e-20 | 86.3 |
MS.gene30551.t1 | AT3G51680 | 27.586 | 290 | 180 | 11 | 1 | 266 | 20 | 303 | 1.92e-18 | 83.6 |
MS.gene30551.t1 | AT3G42960 | 29.588 | 267 | 164 | 10 | 10 | 260 | 3 | 261 | 1.20e-17 | 80.9 |
MS.gene30551.t1 | AT3G26760 | 28.044 | 271 | 170 | 9 | 5 | 260 | 30 | 290 | 2.21e-17 | 80.5 |
MS.gene30551.t1 | AT4G03140 | 26.172 | 256 | 175 | 6 | 15 | 260 | 78 | 329 | 3.57e-17 | 80.5 |
MS.gene30551.t1 | AT1G52340 | 27.839 | 273 | 155 | 8 | 15 | 260 | 18 | 275 | 1.99e-15 | 74.7 |
MS.gene30551.t1 | AT2G47130 | 27.308 | 260 | 172 | 9 | 11 | 261 | 2 | 253 | 2.47e-15 | 73.9 |
MS.gene30551.t1 | AT3G29260 | 27.757 | 263 | 167 | 8 | 11 | 261 | 2 | 253 | 3.41e-15 | 73.6 |
MS.gene30551.t1 | AT3G06060 | 28.500 | 200 | 132 | 5 | 9 | 203 | 31 | 224 | 2.67e-14 | 72.0 |
MS.gene30551.t1 | AT3G06060 | 28.500 | 200 | 132 | 5 | 9 | 203 | 48 | 241 | 4.09e-14 | 71.6 |
MS.gene30551.t1 | AT3G26770 | 27.273 | 264 | 163 | 8 | 15 | 260 | 41 | 293 | 8.71e-14 | 70.5 |
MS.gene30551.t1 | AT5G19200 | 26.852 | 216 | 149 | 4 | 9 | 220 | 29 | 239 | 1.03e-12 | 67.4 |
MS.gene30551.t1 | AT3G03330 | 26.531 | 196 | 135 | 5 | 14 | 202 | 40 | 233 | 2.14e-12 | 66.6 |
MS.gene30551.t1 | AT1G10310 | 31.016 | 187 | 125 | 4 | 19 | 204 | 19 | 202 | 6.37e-12 | 64.3 |
MS.gene30551.t1 | AT5G65205 | 26.596 | 188 | 127 | 5 | 21 | 205 | 12 | 191 | 3.14e-11 | 62.8 |
MS.gene30551.t1 | AT3G29250 | 26.894 | 264 | 177 | 9 | 11 | 265 | 2 | 258 | 4.64e-11 | 62.0 |
MS.gene30551.t1 | AT3G29250 | 26.923 | 260 | 174 | 9 | 15 | 265 | 42 | 294 | 7.96e-11 | 61.6 |
MS.gene30551.t1 | AT3G29250 | 26.923 | 260 | 174 | 9 | 15 | 265 | 44 | 296 | 9.55e-11 | 61.6 |
Find 63 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAGCAAGATTTCTCATTTC+TGG | 0.136218 | 4.2:-40425069 | MS.gene30551:CDS |
CAAGCCCAGCTTATTGTAGA+AGG | 0.344955 | 4.2:+40422017 | None:intergenic |
GTAAAATCTAGTGATTGTTT+TGG | 0.345117 | 4.2:+40425092 | None:intergenic |
CCTGCAGCCTCTTTCATAAC+AGG | 0.358569 | 4.2:-40422082 | MS.gene30551:CDS |
GGACAGACCATTTGTATTGA+TGG | 0.378202 | 4.2:-40422061 | MS.gene30551:CDS |
ACTGGTGGATCCAAAGGAAT+AGG | 0.388939 | 4.2:-40425917 | MS.gene30551:CDS |
AGAACCCCTCTTGGACGTAT+TGG | 0.397142 | 4.2:-40422148 | MS.gene30551:CDS |
AGATAGCAACCCTATTCCTT+TGG | 0.397711 | 4.2:+40425907 | None:intergenic |
TTCATTTCAAGAACCCCTCT+TGG | 0.404796 | 4.2:-40422157 | MS.gene30551:CDS |
TCAATGAATGCTTACATCAA+TGG | 0.405589 | 4.2:-40425371 | MS.gene30551:CDS |
GCAGCAAGAGGGGTTCTGAT+TGG | 0.447876 | 4.2:+40424713 | None:intergenic |
CAATGAATGCTTACATCAAT+GGG | 0.449372 | 4.2:-40425370 | MS.gene30551:CDS |
ACCAAGGAAGACACCTCTTC+TGG | 0.466532 | 4.2:+40422121 | None:intergenic |
GAGTTTGAAGCTTTGAGTAA+TGG | 0.471691 | 4.2:+40424999 | None:intergenic |
TATGACTAGGTATGATATAG+TGG | 0.472016 | 4.2:-40425451 | MS.gene30551:intron |
AGAGGGGTTCTGATTGGCCC+TGG | 0.476277 | 4.2:+40424719 | None:intergenic |
AAATAGTAAGTGGTCTTTGA+AGG | 0.483818 | 4.2:-40425957 | MS.gene30551:CDS |
ACCAGAAGAGGTGTCTTCCT+TGG | 0.491068 | 4.2:-40422122 | MS.gene30551:CDS |
TGGAGCAATTAGCAGAGCTA+GGG | 0.491202 | 4.2:-40425431 | MS.gene30551:CDS |
ATGACAGCTCTGGTCACTGG+TGG | 0.504668 | 4.2:-40425932 | MS.gene30551:CDS |
ACCATCTATAGTGCAGCAAA+AGG | 0.506661 | 4.2:-40424921 | MS.gene30551:intron |
TAACCCTCCATCAATACAAA+TGG | 0.507511 | 4.2:+40422054 | None:intergenic |
TTTGAAGGGGATGACAGCTC+TGG | 0.513224 | 4.2:-40425942 | MS.gene30551:CDS |
GGGATGACAGCTCTGGTCAC+TGG | 0.516153 | 4.2:-40425935 | MS.gene30551:CDS |
TGAGTAATGGATGTGCAAGC+TGG | 0.522910 | 4.2:+40425012 | None:intergenic |
AATAGTAAGTGGTCTTTGAA+GGG | 0.525324 | 4.2:-40425956 | MS.gene30551:CDS |
GTGGAGCAATTAGCAGAGCT+AGG | 0.526426 | 4.2:-40425432 | MS.gene30551:CDS |
AGGACTAATTGTGTTGCACC+AGG | 0.529569 | 4.2:-40424737 | MS.gene30551:CDS |
TTACATCAATGGGTCACAAA+AGG | 0.532043 | 4.2:-40425360 | MS.gene30551:CDS |
CAAGTAGCAGAAATAGTAAG+TGG | 0.538795 | 4.2:-40425967 | MS.gene30551:CDS |
CTGGTCACTGGTGGATCCAA+AGG | 0.539538 | 4.2:-40425923 | MS.gene30551:CDS |
AGAGTCTCTTCTGAGTTCAA+TGG | 0.543714 | 4.2:-40425273 | MS.gene30551:CDS |
ACAAAAGGATACAAAATCAC+TGG | 0.547408 | 4.2:-40425345 | MS.gene30551:CDS |
CAGACCATTTGTATTGATGG+AGG | 0.547706 | 4.2:-40422058 | MS.gene30551:CDS |
CCTGTTATGAAAGAGGCTGC+AGG | 0.552564 | 4.2:+40422082 | None:intergenic |
GGGGTAGCATCACTAAATGT+AGG | 0.552808 | 4.2:-40424945 | MS.gene30551:CDS |
CTGGTGGATCCAAAGGAATA+GGG | 0.554228 | 4.2:-40425916 | MS.gene30551:intron |
CCACTGTACACACTTGTGCT+AGG | 0.562221 | 4.2:-40425407 | MS.gene30551:CDS |
AGACCATTTGTATTGATGGA+GGG | 0.569442 | 4.2:-40422057 | MS.gene30551:CDS |
TTTCATGTCCTCCATTGGTG+GGG | 0.574535 | 4.2:-40424964 | MS.gene30551:CDS |
GAAATTTAGGTGAACAATGT+GGG | 0.576001 | 4.2:-40425125 | MS.gene30551:intron |
AAATTACTTCTGCAGCAAGA+GGG | 0.582091 | 4.2:+40424702 | None:intergenic |
TAGTGATGCTACCCCACCAA+TGG | 0.589871 | 4.2:+40424953 | None:intergenic |
AGTGGGCTAGAGACAACATA+AGG | 0.591685 | 4.2:-40424757 | MS.gene30551:CDS |
GTTCTCCAATACGTCCAAGA+GGG | 0.595929 | 4.2:+40422143 | None:intergenic |
AAAATTACTTCTGCAGCAAG+AGG | 0.596709 | 4.2:+40424701 | None:intergenic |
AGAAGAGGTGTCTTCCTTGG+TGG | 0.599777 | 4.2:-40422119 | MS.gene30551:CDS |
AAGAGGCTGCAGGTAAGCAT+AGG | 0.600954 | 4.2:+40422092 | None:intergenic |
TGAAATTTAGGTGAACAATG+TGG | 0.603162 | 4.2:-40425126 | MS.gene30551:intron |
GTCATCTCGTGCACAAAGAG+AGG | 0.604943 | 4.2:-40425307 | MS.gene30551:CDS |
AATTACTTCTGCAGCAAGAG+GGG | 0.609401 | 4.2:+40424703 | None:intergenic |
ATAGTAAGTGGTCTTTGAAG+GGG | 0.610704 | 4.2:-40425955 | MS.gene30551:CDS |
GGTCTGTCCTGTTATGAAAG+AGG | 0.618109 | 4.2:+40422075 | None:intergenic |
TGATGCTACCCCACCAATGG+AGG | 0.621694 | 4.2:+40424956 | None:intergenic |
TATTAAGGAGAAATGGCAGA+GGG | 0.641387 | 4.2:-40425995 | None:intergenic |
ACGTATTGGAGAACCAGAAG+AGG | 0.658963 | 4.2:-40422134 | MS.gene30551:CDS |
GTATTAAGGAGAAATGGCAG+AGG | 0.659922 | 4.2:-40425996 | None:intergenic |
GGAGCAATTAGCAGAGCTAG+GGG | 0.662491 | 4.2:-40425430 | MS.gene30551:CDS |
TTCTCCAATACGTCCAAGAG+GGG | 0.662521 | 4.2:+40422144 | None:intergenic |
GGACTAATTGTGTTGCACCA+GGG | 0.676221 | 4.2:-40424736 | MS.gene30551:CDS |
TAAGCATAGGAATGCCACCA+AGG | 0.681785 | 4.2:+40422105 | None:intergenic |
GGTTCTCCAATACGTCCAAG+AGG | 0.697030 | 4.2:+40422142 | None:intergenic |
CCTAGCACAAGTGTGTACAG+TGG | 0.731390 | 4.2:+40425407 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAATCAACAAAAAAATT+AGG | - | chr4.2:40424987-40425006 | MS.gene30551:CDS | 10.0% |
!! | ATACATAAATAAATAAATGT+CGG | + | chr4.2:40422865-40422884 | None:intergenic | 10.0% |
!! | ATTAATCAACAAAAAAATTA+GGG | - | chr4.2:40424988-40425007 | MS.gene30551:CDS | 10.0% |
!! | TTTATTTATGTATGAAATTT+AGG | - | chr4.2:40422872-40422891 | MS.gene30551:intron | 10.0% |
!! | AGAAACTTAATAATTTCATA+TGG | - | chr4.2:40424034-40424053 | MS.gene30551:intron | 15.0% |
!! | ATCAATTAACTACAAAATTT+GGG | + | chr4.2:40422280-40422299 | None:intergenic | 15.0% |
!! | GGTTTCAAATTTATATATTT+GGG | - | chr4.2:40425104-40425123 | MS.gene30551:CDS | 15.0% |
!! | GTTTCAAATTTATATATTTG+GGG | - | chr4.2:40425105-40425124 | MS.gene30551:CDS | 15.0% |
!! | TCAAAAAAATTCAATCAAAA+TGG | + | chr4.2:40424351-40424370 | None:intergenic | 15.0% |
!! | TTTCGAAATTAAAAAATCAT+TGG | + | chr4.2:40424969-40424988 | None:intergenic | 15.0% |
!!! | AAAATTGTAAATTTTTTGTG+TGG | + | chr4.2:40424654-40424673 | None:intergenic | 15.0% |
!!! | AAATTGTAAATTTTTTGTGT+GGG | + | chr4.2:40424653-40424672 | None:intergenic | 15.0% |
!!! | ATGGTATTTTTATTAATTTG+AGG | - | chr4.2:40424292-40424311 | MS.gene30551:intron | 15.0% |
!!! | GAAACAATTTTTTTAGATAA+AGG | + | chr4.2:40425460-40425479 | None:intergenic | 15.0% |
!!! | TATTTTTTTCACCTTTTTAT+AGG | - | chr4.2:40422815-40422834 | MS.gene30551:intron | 15.0% |
!! | ACTAAACAAATCCTATAAAA+AGG | + | chr4.2:40422829-40422848 | None:intergenic | 20.0% |
!! | ATAGATATTTCGATAAATTC+AGG | - | chr4.2:40425383-40425402 | MS.gene30551:CDS | 20.0% |
!! | ATAGATATTTCGATAAATTC+AGG | + | chr4.2:40425402-40425383 | None:intergenic | 20.0% |
!! | ATATATGTAATTTACAATGC+AGG | - | chr4.2:40423195-40423214 | MS.gene30551:intron | 20.0% |
!! | ATATATGTTGTGAAAATTCA+AGG | - | chr4.2:40424260-40424279 | MS.gene30551:intron | 20.0% |
!! | ATGGATATGTATAAAATTCA+GGG | - | chr4.2:40424324-40424343 | MS.gene30551:intron | 20.0% |
!! | GATCAATTAACTACAAAATT+TGG | + | chr4.2:40422281-40422300 | None:intergenic | 20.0% |
!! | GGGTTTCAAATTTATATATT+TGG | - | chr4.2:40425103-40425122 | MS.gene30551:CDS | 20.0% |
!! | TAAAAAACGAGTTTATAAGT+AGG | + | chr4.2:40425708-40425727 | None:intergenic | 20.0% |
!! | TAATAAAAATACCATCAAAG+AGG | + | chr4.2:40424287-40424306 | None:intergenic | 20.0% |
!! | TAGATATTTCGATAAATTCA+GGG | - | chr4.2:40425384-40425403 | MS.gene30551:CDS | 20.0% |
!! | TAGATATTTCGATAAATTCA+GGG | + | chr4.2:40425403-40425384 | None:intergenic | 20.0% |
!! | TGTATTATTAATTGCTTACA+AGG | + | chr4.2:40422775-40422794 | None:intergenic | 20.0% |
!! | TTGTTAAAATATTGTTCCAT+TGG | + | chr4.2:40422463-40422482 | None:intergenic | 20.0% |
!! | TTTCTGTAAATCAATCAATT+TGG | - | chr4.2:40425234-40425253 | MS.gene30551:intron | 20.0% |
!!! | ACATAAGGTTTGTTTAATAA+TGG | + | chr4.2:40424746-40424765 | None:intergenic | 20.0% |
!!! | ATTGAATTTTTTTGACAGAA+GGG | - | chr4.2:40424356-40424375 | MS.gene30551:intron | 20.0% |
!!! | ATTGACATTTTGTAAATTCA+GGG | - | chr4.2:40425355-40425374 | MS.gene30551:CDS | 20.0% |
!!! | ATTTTGTTTTTTGAGTGTAT+AGG | + | chr4.2:40424686-40424705 | None:intergenic | 20.0% |
!!! | GGTTTTATGTTTTTTGAATT+GGG | - | chr4.2:40425009-40425028 | MS.gene30551:CDS | 20.0% |
!!! | GTTTTATGTTTTTTGAATTG+GGG | - | chr4.2:40425010-40425029 | MS.gene30551:CDS | 20.0% |
!!! | TACTTATAAACTCGTTTTTT+AGG | - | chr4.2:40425707-40425726 | MS.gene30551:intron | 20.0% |
!!! | TAGACACAATCAAATTTTTT+TGG | + | chr4.2:40425643-40425662 | None:intergenic | 20.0% |
!!! | TGATTATCAGTTTTAGTTTT+AGG | - | chr4.2:40423903-40423922 | MS.gene30551:intron | 20.0% |
! | AAAACTGATAATCACAGAAA+CGG | + | chr4.2:40423897-40423916 | None:intergenic | 25.0% |
! | AAACAGAGTATATAATCAAG+AGG | - | chr4.2:40424074-40424093 | MS.gene30551:intron | 25.0% |
! | AAACCAGCTTACAAAAAATT+TGG | - | chr4.2:40423224-40423243 | MS.gene30551:intron | 25.0% |
! | AGGTGACAAATAATAACATT+AGG | - | chr4.2:40425082-40425101 | MS.gene30551:CDS | 25.0% |
! | ATGTGAATTAAACTATGACT+AGG | - | chr4.2:40422546-40422565 | MS.gene30551:intron | 25.0% |
! | ATTAAACAAACCTTATGTAG+AGG | - | chr4.2:40424748-40424767 | MS.gene30551:CDS | 25.0% |
! | CTTTGACTAATAATAACCAA+TGG | - | chr4.2:40422444-40422463 | MS.gene30551:intron | 25.0% |
! | GATGGATATGTATAAAATTC+AGG | - | chr4.2:40424323-40424342 | MS.gene30551:intron | 25.0% |
! | GGTGACAAATAATAACATTA+GGG | - | chr4.2:40425083-40425102 | MS.gene30551:CDS | 25.0% |
! | TAATTTCATATGGATCGATT+TGG | - | chr4.2:40424044-40424063 | MS.gene30551:intron | 25.0% |
! | TCAACTAATTTCATGATCTA+TGG | + | chr4.2:40422218-40422237 | None:intergenic | 25.0% |
! | TGATTTACAGAAAATTTCGA+AGG | + | chr4.2:40425227-40425246 | None:intergenic | 25.0% |
! | TGTAATGTTGTAATGAAAAG+AGG | + | chr4.2:40424402-40424421 | None:intergenic | 25.0% |
! | TTAAACAAACCTTATGTAGA+GGG | - | chr4.2:40424749-40424768 | MS.gene30551:CDS | 25.0% |
! | TTTCTTACAACACAAATTCT+AGG | - | chr4.2:40424814-40424833 | MS.gene30551:intron | 25.0% |
!! | CTTTTCATTACAACATTACA+TGG | - | chr4.2:40424402-40424421 | MS.gene30551:intron | 25.0% |
!! | GATTGACATTTTGTAAATTC+AGG | - | chr4.2:40425354-40425373 | MS.gene30551:CDS | 25.0% |
!! | GTAAAATCTAGTGATTGTTT+TGG | + | chr4.2:40422921-40422940 | None:intergenic | 25.0% |
!! | TCAATTCATGGAAGAATTTT+GGG | - | chr4.2:40425045-40425064 | MS.gene30551:CDS | 25.0% |
!! | TTTCTGAAAATCCATCAATT+TGG | - | chr4.2:40425200-40425219 | MS.gene30551:intron | 25.0% |
!!! | AGGTTGATTAAGATTTTGAT+AGG | + | chr4.2:40424478-40424497 | None:intergenic | 25.0% |
!!! | CTAGGCTATTTTAAAAACAA+TGG | + | chr4.2:40424613-40424632 | None:intergenic | 25.0% |
!!! | GATTGAATTTTTTTGACAGA+AGG | - | chr4.2:40424355-40424374 | MS.gene30551:intron | 25.0% |
!!! | GGGTTTTATGTTTTTTGAAT+TGG | - | chr4.2:40425008-40425027 | MS.gene30551:CDS | 25.0% |
!!! | TATTTTAAAAACAATGGTGC+TGG | + | chr4.2:40424607-40424626 | None:intergenic | 25.0% |
!!! | TTGATGGATTTTCAGAAAAT+TGG | + | chr4.2:40425198-40425217 | None:intergenic | 25.0% |
AAAAAATTTGGCATGTGAGT+GGG | - | chr4.2:40423236-40423255 | MS.gene30551:intron | 30.0% | |
AAATAGTAAGTGGTCTTTGA+AGG | - | chr4.2:40422053-40422072 | MS.gene30551:CDS | 30.0% | |
AATAGTAAGTGGTCTTTGAA+GGG | - | chr4.2:40422054-40422073 | MS.gene30551:CDS | 30.0% | |
AATCAAGAGGAAAATGTTGA+TGG | - | chr4.2:40424087-40424106 | MS.gene30551:intron | 30.0% | |
AATTCTTCCATGAATTGAGT+AGG | + | chr4.2:40425043-40425062 | None:intergenic | 30.0% | |
ACAAAAGGATACAAAATCAC+TGG | - | chr4.2:40422665-40422684 | MS.gene30551:intron | 30.0% | |
ACAGAAACGGAAACAAAAAA+GGG | + | chr4.2:40423884-40423903 | None:intergenic | 30.0% | |
AGAAATGATGAAGACAATGT+TGG | - | chr4.2:40424147-40424166 | MS.gene30551:intron | 30.0% | |
AGCAAAAGGTAACTATTTCA+TGG | - | chr4.2:40423103-40423122 | MS.gene30551:intron | 30.0% | |
ATAATTCAAGGACGAAATTG+AGG | - | chr4.2:40425427-40425446 | MS.gene30551:CDS | 30.0% | |
ATAATTCAAGGACGAAATTG+AGG | + | chr4.2:40425446-40425427 | None:intergenic | 30.0% | |
ATATATCACTGAGTTTCTTC+AGG | + | chr4.2:40424222-40424241 | None:intergenic | 30.0% | |
ATGAAAGACAATGGTAATTG+AGG | + | chr4.2:40423660-40423679 | None:intergenic | 30.0% | |
ATGGGTAAAATTGATTGTGT+AGG | + | chr4.2:40424511-40424530 | None:intergenic | 30.0% | |
ATTACAACATTACATGGACT+TGG | - | chr4.2:40424408-40424427 | MS.gene30551:intron | 30.0% | |
CAATGAATGCTTACATCAAT+GGG | - | chr4.2:40422640-40422659 | MS.gene30551:intron | 30.0% | |
GAAATTTAGGTGAACAATGT+GGG | - | chr4.2:40422885-40422904 | MS.gene30551:intron | 30.0% | |
GTCCTATATCGAATGAAATA+TGG | + | chr4.2:40425733-40425752 | None:intergenic | 30.0% | |
TAATCCAACTCCTAGAAAAT+CGG | - | chr4.2:40425661-40425680 | MS.gene30551:intron | 30.0% | |
TATGACTAGGTATGATATAG+TGG | - | chr4.2:40422559-40422578 | MS.gene30551:intron | 30.0% | |
TATTTCGATAAATTCAGGGA+CGG | + | chr4.2:40425407-40425388 | None:intergenic | 30.0% | |
TCAATGAATGCTTACATCAA+TGG | - | chr4.2:40422639-40422658 | MS.gene30551:intron | 30.0% | |
TGAAAGACAATGGTAATTGA+GGG | + | chr4.2:40423659-40423678 | None:intergenic | 30.0% | |
TGAAATTTAGGTGAACAATG+TGG | - | chr4.2:40422884-40422903 | MS.gene30551:intron | 30.0% | |
TTAACTCAAAGCTAATTTCC+TGG | - | chr4.2:40422342-40422361 | MS.gene30551:intron | 30.0% | |
TTTCTCCTTGAACTCATTAA+CGG | + | chr4.2:40425166-40425185 | None:intergenic | 30.0% | |
! | AATTCATGGAAGAATTTTGG+GGG | - | chr4.2:40425047-40425066 | MS.gene30551:CDS | 30.0% |
! | ATTGGTGATTGTTGAAGATT+CGG | + | chr4.2:40424951-40424970 | None:intergenic | 30.0% |
! | CAATTCATGGAAGAATTTTG+GGG | - | chr4.2:40425046-40425065 | MS.gene30551:CDS | 30.0% |
! | CTCAATTCATGGAAGAATTT+TGG | - | chr4.2:40425044-40425063 | MS.gene30551:CDS | 30.0% |
! | GATTTTCAGAAAATTGGCAA+CGG | + | chr4.2:40425192-40425211 | None:intergenic | 30.0% |
!! | AATTCGAGATTTCACTTTTG+AGG | - | chr4.2:40423605-40423624 | MS.gene30551:intron | 30.0% |
!! | TAATTTGAGGATCGATTTGA+TGG | - | chr4.2:40424305-40424324 | MS.gene30551:intron | 30.0% |
!!! | ATCTTTTAAGATCTGCAAGA+AGG | + | chr4.2:40425815-40425834 | None:intergenic | 30.0% |
!!! | ATGCCAAATTTTTTGTAAGC+TGG | + | chr4.2:40423230-40423249 | None:intergenic | 30.0% |
AAAATTACTTCTGCAGCAAG+AGG | + | chr4.2:40423312-40423331 | None:intergenic | 35.0% | |
AAATTACTTCTGCAGCAAGA+GGG | + | chr4.2:40423311-40423330 | None:intergenic | 35.0% | |
AAATTCAAGGACCTCTTTGA+TGG | - | chr4.2:40424273-40424292 | MS.gene30551:intron | 35.0% | |
AAGAACACCTACTCAATTCA+TGG | - | chr4.2:40425033-40425052 | MS.gene30551:CDS | 35.0% | |
AAGGACGAAATTGATGGAAA+TGG | - | chr4.2:40423578-40423597 | MS.gene30551:intron | 35.0% | |
AATGTGAGGATGAAAGACAA+TGG | + | chr4.2:40423669-40423688 | None:intergenic | 35.0% | |
ACATATATCACTGTGATCCT+TGG | + | chr4.2:40424248-40424267 | None:intergenic | 35.0% | |
ACTCAGTGATATATGTACCA+AGG | - | chr4.2:40424228-40424247 | MS.gene30551:intron | 35.0% | |
ATAGAGAAGCCAAATGATAG+GGG | + | chr4.2:40424562-40424581 | None:intergenic | 35.0% | |
ATGGTTATGTGATGTGTGAA+TGG | + | chr4.2:40424727-40424746 | None:intergenic | 35.0% | |
ATTTCGAAGGACCAAATTGA+TGG | + | chr4.2:40425214-40425233 | None:intergenic | 35.0% | |
CAAAAAATTTGGCATGTGAG+TGG | - | chr4.2:40423235-40423254 | MS.gene30551:intron | 35.0% | |
CAAGTAGCAGAAATAGTAAG+TGG | - | chr4.2:40422043-40422062 | MS.gene30551:CDS | 35.0% | |
CACAGAAACGGAAACAAAAA+AGG | + | chr4.2:40423885-40423904 | None:intergenic | 35.0% | |
GAAAGACAATGGTAATTGAG+GGG | + | chr4.2:40423658-40423677 | None:intergenic | 35.0% | |
GAATGGAAAACGAAGTTGAA+TGG | + | chr4.2:40423845-40423864 | None:intergenic | 35.0% | |
GAATTAGACTATTGACAACC+AGG | + | chr4.2:40422363-40422382 | None:intergenic | 35.0% | |
GATAGAGAAGCCAAATGATA+GGG | + | chr4.2:40424563-40424582 | None:intergenic | 35.0% | |
GATCGATTGCTGATAATTCA+AGG | - | chr4.2:40425415-40425434 | MS.gene30551:CDS | 35.0% | |
GATCGATTGCTGATAATTCA+AGG | + | chr4.2:40425434-40425415 | None:intergenic | 35.0% | |
GCACAAAAGAATAAGAGAAG+AGG | + | chr4.2:40422140-40422159 | None:intergenic | 35.0% | |
GGCCATATTTCATTCGATAT+AGG | - | chr4.2:40425728-40425747 | MS.gene30551:intron | 35.0% | |
TAAAGCTTGAAGATGAAGAC+TGG | - | chr4.2:40424875-40424894 | MS.gene30551:intron | 35.0% | |
TAACAGACCAACTTAACGTA+GGG | - | chr4.2:40425323-40425342 | MS.gene30551:CDS | 35.0% | |
TAACCCTCCATCAATACAAA+TGG | + | chr4.2:40425959-40425978 | None:intergenic | 35.0% | |
TCCAAAATCATCATCATCAC+CGG | - | chr4.2:40423759-40423778 | MS.gene30551:intron | 35.0% | |
TCTCTTCCAGTCCAAATTAA+CGG | + | chr4.2:40425140-40425159 | None:intergenic | 35.0% | |
TGAGCAAGATTTCTCATTTC+TGG | - | chr4.2:40422941-40422960 | MS.gene30551:intron | 35.0% | |
TGATAGAGAAGCCAAATGAT+AGG | + | chr4.2:40424564-40424583 | None:intergenic | 35.0% | |
TTAACAGACCAACTTAACGT+AGG | - | chr4.2:40425322-40425341 | MS.gene30551:CDS | 35.0% | |
TTACATCAATGGGTCACAAA+AGG | - | chr4.2:40422650-40422669 | MS.gene30551:intron | 35.0% | |
! | AAAACTAGTTTGTCCGATGT+GGG | - | chr4.2:40425589-40425608 | MS.gene30551:intron | 35.0% |
! | AGACCATTTGTATTGATGGA+GGG | - | chr4.2:40425953-40425972 | MS.gene30551:CDS | 35.0% |
! | ATAGTAAGTGGTCTTTGAAG+GGG | - | chr4.2:40422055-40422074 | MS.gene30551:CDS | 35.0% |
! | ATTGTTTTCATGTCCTCCAT+TGG | - | chr4.2:40423041-40423060 | MS.gene30551:intron | 35.0% |
! | TAAAACTAGTTTGTCCGATG+TGG | - | chr4.2:40425588-40425607 | MS.gene30551:intron | 35.0% |
! | TGGTAATTGAGGGGTATAAT+TGG | + | chr4.2:40423649-40423668 | None:intergenic | 35.0% |
!! | ACAGTATTAGCCGATTTTCT+AGG | + | chr4.2:40425674-40425693 | None:intergenic | 35.0% |
!! | ACGTTAAGTTGGTCTGTTAA+CGG | + | chr4.2:40425322-40425341 | None:intergenic | 35.0% |
!! | AGTTTCTGGTTGAGTTTGTT+GGG | + | chr4.2:40424184-40424203 | None:intergenic | 35.0% |
!! | ATGATTTTGGAGAAGTGAAG+AGG | + | chr4.2:40423750-40423769 | None:intergenic | 35.0% |
!! | GAAAATGTTGATGGTACTCA+AGG | - | chr4.2:40424096-40424115 | MS.gene30551:intron | 35.0% |
!! | GAGTTTGAAGCTTTGAGTAA+TGG | + | chr4.2:40423014-40423033 | None:intergenic | 35.0% |
!! | TGATTTTGGAGAAGTGAAGA+GGG | + | chr4.2:40423749-40423768 | None:intergenic | 35.0% |
AATCAGTCCCTACGTTAAGT+TGG | + | chr4.2:40425333-40425352 | None:intergenic | 40.0% | |
AATTACTTCTGCAGCAAGAG+GGG | + | chr4.2:40423310-40423329 | None:intergenic | 40.0% | |
ACCATCTATAGTGCAGCAAA+AGG | - | chr4.2:40423089-40423108 | MS.gene30551:intron | 40.0% | |
AGAGTCTCTTCTGAGTTCAA+TGG | - | chr4.2:40422737-40422756 | MS.gene30551:intron | 40.0% | |
AGATAGCAACCCTATTCCTT+TGG | + | chr4.2:40422106-40422125 | None:intergenic | 40.0% | |
ATGGACGTCTGCAAAATTCA+GGG | + | chr4.2:40423457-40423476 | None:intergenic | 40.0% | |
ATGTGAGAGAGCTTCATTGT+TGG | + | chr4.2:40424843-40424862 | None:intergenic | 40.0% | |
ATTGTGTAGGAAGTGAGCTT+AGG | + | chr4.2:40424498-40424517 | None:intergenic | 40.0% | |
CAATAGTCACGATGCTTGTT+TGG | - | chr4.2:40422390-40422409 | MS.gene30551:intron | 40.0% | |
GAGAAACGAACAACAGTGAA+TGG | + | chr4.2:40423862-40423881 | None:intergenic | 40.0% | |
GATCAACCGTGGAAAAGATA+CGG | - | chr4.2:40423783-40423802 | MS.gene30551:intron | 40.0% | |
GGAAGAAAGAGCCGTTAATT+TGG | - | chr4.2:40425126-40425145 | MS.gene30551:intron | 40.0% | |
GGACAGACCATTTGTATTGA+TGG | - | chr4.2:40425949-40425968 | MS.gene30551:CDS | 40.0% | |
GTGTACAAGGACGAAATTGA+TGG | - | chr4.2:40423572-40423591 | MS.gene30551:intron | 40.0% | |
TACTCAAGGAATGGAGGAAA+TGG | - | chr4.2:40424110-40424129 | MS.gene30551:intron | 40.0% | |
TTCATTTCAAGAACCCCTCT+TGG | - | chr4.2:40425853-40425872 | MS.gene30551:intron | 40.0% | |
TTGGTATGCGACTAATGAGT+TGG | + | chr4.2:40425624-40425643 | None:intergenic | 40.0% | |
! | AAAGAGCCGTTAATTTGGAC+TGG | - | chr4.2:40425131-40425150 | MS.gene30551:intron | 40.0% |
! | AAGCATCGTGACTATTGACT+AGG | + | chr4.2:40422387-40422406 | None:intergenic | 40.0% |
! | ACCTTTTGCTGCACTATAGA+TGG | + | chr4.2:40423093-40423112 | None:intergenic | 40.0% |
! | AGGGGTATAATTGGAAACAC+AGG | + | chr4.2:40423640-40423659 | None:intergenic | 40.0% |
! | CAGACCATTTGTATTGATGG+AGG | - | chr4.2:40425952-40425971 | MS.gene30551:CDS | 40.0% |
! | GTTGATGAAGCTGAAGAACT+AGG | + | chr4.2:40424631-40424650 | None:intergenic | 40.0% |
! | TCAAAGCCGTATCTTTTCCA+CGG | + | chr4.2:40423792-40423811 | None:intergenic | 40.0% |
! | TCAGATTTCGTGGTTTGTCA+AGG | - | chr4.2:40423814-40423833 | MS.gene30551:intron | 40.0% |
! | TTTGGGGGATTTTGAACTCT+AGG | - | chr4.2:40425062-40425081 | MS.gene30551:CDS | 40.0% |
! | TTTTCATGTCCTCCATTGGT+GGG | - | chr4.2:40423045-40423064 | MS.gene30551:intron | 40.0% |
!! | AAAAACAATGGTGCTGGTCA+TGG | + | chr4.2:40424601-40424620 | None:intergenic | 40.0% |
!! | ATTCGGTGTTCAGGAATGAT+GGG | + | chr4.2:40424934-40424953 | None:intergenic | 40.0% |
!! | GAGTTTCTGGTTGAGTTTGT+TGG | + | chr4.2:40424185-40424204 | None:intergenic | 40.0% |
!! | GTTTCTTCAGGTTGAGTTTC+AGG | + | chr4.2:40424210-40424229 | None:intergenic | 40.0% |
!! | TGAGTTTCAGGTTGAGTTTC+TGG | + | chr4.2:40424198-40424217 | None:intergenic | 40.0% |
!! | TGGTTCTGAGTGAAAATGTG+AGG | + | chr4.2:40423683-40423702 | None:intergenic | 40.0% |
!! | TGTTGATGGTACTCAAGGAA+TGG | - | chr4.2:40424101-40424120 | MS.gene30551:intron | 40.0% |
!! | TTAAGTTGGTCTGTTAACGG+AGG | + | chr4.2:40425319-40425338 | None:intergenic | 40.0% |
!! | TTAGCCGATTTTCTAGGAGT+TGG | + | chr4.2:40425668-40425687 | None:intergenic | 40.0% |
!! | TTGTTGAAGATTCGGTGTTC+AGG | + | chr4.2:40424943-40424962 | None:intergenic | 40.0% |
AAATGATAGGGGCAGAGAAG+AGG | + | chr4.2:40424551-40424570 | None:intergenic | 45.0% | |
AAGGAATGGAGGAAATGGCT+TGG | - | chr4.2:40424115-40424134 | MS.gene30551:intron | 45.0% | |
ACAGGACAACACAACATGCA+AGG | + | chr4.2:40423529-40423548 | None:intergenic | 45.0% | |
ACGTATTGGAGAACCAGAAG+AGG | - | chr4.2:40425876-40425895 | MS.gene30551:intron | 45.0% | |
AGACATAGAAAGGCCTTCCT+GGG | - | chr4.2:40424773-40424792 | MS.gene30551:CDS | 45.0% | |
AGGAATGGAGGAAATGGCTT+GGG | - | chr4.2:40424116-40424135 | MS.gene30551:intron | 45.0% | |
AGGACAACACAACATGCAAG+GGG | + | chr4.2:40423527-40423546 | None:intergenic | 45.0% | |
AGGACTAATTGTGTTGCACC+AGG | - | chr4.2:40423273-40423292 | MS.gene30551:intron | 45.0% | |
CAATTTCGTCCTTGTACACG+TGG | + | chr4.2:40423571-40423590 | None:intergenic | 45.0% | |
CAGGACAACACAACATGCAA+GGG | + | chr4.2:40423528-40423547 | None:intergenic | 45.0% | |
CTATGTCTGCCCTCTACATA+AGG | + | chr4.2:40424761-40424780 | None:intergenic | 45.0% | |
CTGGTCATGGAAGAAATGCA+AGG | + | chr4.2:40424588-40424607 | None:intergenic | 45.0% | |
GAGAGCCGTTAATGAGTTCA+AGG | - | chr4.2:40425158-40425177 | MS.gene30551:intron | 45.0% | |
GATGGACGTCTGCAAAATTC+AGG | + | chr4.2:40423458-40423477 | None:intergenic | 45.0% | |
GGACATGTCATCACCACTAA+CGG | + | chr4.2:40423506-40423525 | None:intergenic | 45.0% | |
GGACTAATTGTGTTGCACCA+GGG | - | chr4.2:40423274-40423293 | MS.gene30551:intron | 45.0% | |
GGGGTAGCATCACTAAATGT+AGG | - | chr4.2:40423065-40423084 | MS.gene30551:intron | 45.0% | |
GGTCTGTCCTGTTATGAAAG+AGG | + | chr4.2:40425938-40425957 | None:intergenic | 45.0% | |
GTTCTCCAATACGTCCAAGA+GGG | + | chr4.2:40425870-40425889 | None:intergenic | 45.0% | |
TAAGCATAGGAATGCCACCA+AGG | + | chr4.2:40425908-40425927 | None:intergenic | 45.0% | |
TCTTCTCTGCCCCTATCATT+TGG | - | chr4.2:40424550-40424569 | MS.gene30551:intron | 45.0% | |
TGATGGTACTCAAGGAATGG+AGG | - | chr4.2:40424104-40424123 | MS.gene30551:intron | 45.0% | |
TGGAGCAATTAGCAGAGCTA+GGG | - | chr4.2:40422579-40422598 | MS.gene30551:intron | 45.0% | |
TGTAGAGGGCAGACATAGAA+AGG | - | chr4.2:40424763-40424782 | MS.gene30551:CDS | 45.0% | |
TTCTCCAATACGTCCAAGAG+GGG | + | chr4.2:40425869-40425888 | None:intergenic | 45.0% | |
TTTCATGTCCTCCATTGGTG+GGG | - | chr4.2:40423046-40423065 | MS.gene30551:intron | 45.0% | |
! | ACTGGTGGATCCAAAGGAAT+AGG | - | chr4.2:40422093-40422112 | MS.gene30551:CDS | 45.0% |
! | ATCACCACTAACGGTGCTTT+TGG | + | chr4.2:40423497-40423516 | None:intergenic | 45.0% |
! | CTGGTGGATCCAAAGGAATA+GGG | - | chr4.2:40422094-40422113 | MS.gene30551:CDS | 45.0% |
! | GTTTGGACGACAAGGTTGAT+GGG | + | chr4.2:40424529-40424548 | None:intergenic | 45.0% |
! | GTTTTCATGTCCTCCATTGG+TGG | - | chr4.2:40423044-40423063 | MS.gene30551:intron | 45.0% |
!! | AAGGTAAGGGACTGGTTTGA+TGG | + | chr4.2:40423703-40423722 | None:intergenic | 45.0% |
!! | AGTGGGCTAGAGACAACATA+AGG | - | chr4.2:40423253-40423272 | MS.gene30551:intron | 45.0% |
!! | GATTCGGTGTTCAGGAATGA+TGG | + | chr4.2:40424935-40424954 | None:intergenic | 45.0% |
!! | GCCGGTGATGATGATGATTT+TGG | + | chr4.2:40423763-40423782 | None:intergenic | 45.0% |
!! | GGCTTTGAAGTCAGATTTCG+TGG | - | chr4.2:40423804-40423823 | MS.gene30551:intron | 45.0% |
!! | TGAGTAATGGATGTGCAAGC+TGG | + | chr4.2:40423001-40423020 | None:intergenic | 45.0% |
!!! | TTTTTTTATTAGTAATTTTA+GGG | - | chr4.2:40424002-40424021 | MS.gene30551:intron | 5.0% |
!!! | TTTTTTTTATTAGTAATTTT+AGG | - | chr4.2:40424001-40424020 | MS.gene30551:intron | 5.0% |
AAGAGGCTGCAGGTAAGCAT+AGG | + | chr4.2:40425921-40425940 | None:intergenic | 50.0% | |
ACACTGTCCAAAACCCAGGA+AGG | + | chr4.2:40424789-40424808 | None:intergenic | 50.0% | |
ACCAAGGAAGACACCTCTTC+TGG | + | chr4.2:40425892-40425911 | None:intergenic | 50.0% | |
AGAACCCCTCTTGGACGTAT+TGG | - | chr4.2:40425862-40425881 | MS.gene30551:intron | 50.0% | |
AGGCTGGAAGGTGAAAGGTA+AGG | + | chr4.2:40423717-40423736 | None:intergenic | 50.0% | |
ATAGGGGCAGAGAAGAGGTT+TGG | + | chr4.2:40424546-40424565 | None:intergenic | 50.0% | |
CAGACATAGAAAGGCCTTCC+TGG | - | chr4.2:40424772-40424791 | MS.gene30551:CDS | 50.0% | |
CCACTGTACACACTTGTGCT+AGG | - | chr4.2:40422603-40422622 | MS.gene30551:intron | 50.0% | |
CCTAGCACAAGTGTGTACAG+TGG | + | chr4.2:40422606-40422625 | None:intergenic | 50.0% | |
CCTGCAGCCTCTTTCATAAC+AGG | - | chr4.2:40425928-40425947 | MS.gene30551:CDS | 50.0% | |
CCTGTTATGAAAGAGGCTGC+AGG | + | chr4.2:40425931-40425950 | None:intergenic | 50.0% | |
GAAGGTGAAAGGTAAGGGAC+TGG | + | chr4.2:40423711-40423730 | None:intergenic | 50.0% | |
GAGAAGAGGTTTGGACGACA+AGG | + | chr4.2:40424537-40424556 | None:intergenic | 50.0% | |
GCAAACACTGTCCAAAACCC+AGG | + | chr4.2:40424793-40424812 | None:intergenic | 50.0% | |
GGAGCAATTAGCAGAGCTAG+GGG | - | chr4.2:40422580-40422599 | MS.gene30551:intron | 50.0% | |
GGCTGGAAGGTGAAAGGTAA+GGG | + | chr4.2:40423716-40423735 | None:intergenic | 50.0% | |
GGTTCTCCAATACGTCCAAG+AGG | + | chr4.2:40425871-40425890 | None:intergenic | 50.0% | |
GGTTTAGGCTGGAAGGTGAA+AGG | + | chr4.2:40423722-40423741 | None:intergenic | 50.0% | |
GGTTTGGACGACAAGGTTGA+TGG | + | chr4.2:40424530-40424549 | None:intergenic | 50.0% | |
GTCATCTCGTGCACAAAGAG+AGG | - | chr4.2:40422703-40422722 | MS.gene30551:intron | 50.0% | |
GTCCTGTACACGTGTCAACA+AGG | - | chr4.2:40423542-40423561 | MS.gene30551:intron | 50.0% | |
GTGGAGCAATTAGCAGAGCT+AGG | - | chr4.2:40422578-40422597 | MS.gene30551:intron | 50.0% | |
TAGTGATGCTACCCCACCAA+TGG | + | chr4.2:40423060-40423079 | None:intergenic | 50.0% | |
TGGAGAAGTGAAGAGGGTGA+CGG | + | chr4.2:40423743-40423762 | None:intergenic | 50.0% | |
TTTGAAGGGGATGACAGCTC+TGG | - | chr4.2:40422068-40422087 | MS.gene30551:CDS | 50.0% | |
! | ACTAGTTTGTCCGATGTGGG+AGG | - | chr4.2:40425592-40425611 | MS.gene30551:intron | 50.0% |
! | AGAAAGGCCTTCCTGGGTTT+TGG | - | chr4.2:40424779-40424798 | MS.gene30551:CDS | 50.0% |
! | AGTGAAGAGGGTGACGGTTT+AGG | + | chr4.2:40423737-40423756 | None:intergenic | 50.0% |
! | CCACTAACGGTGCTTTTGGA+CGG | + | chr4.2:40423493-40423512 | None:intergenic | 50.0% |
! | TAACGGTGCTTTTGGACGGA+GGG | + | chr4.2:40423489-40423508 | None:intergenic | 50.0% |
! | TCTTTTCCACGGTTGATCGC+CGG | + | chr4.2:40423781-40423800 | None:intergenic | 50.0% |
! | TGCCTTGTTGACACGTGTAC+AGG | + | chr4.2:40423547-40423566 | None:intergenic | 50.0% |
!! | ACCAGAAGAGGTGTCTTCCT+TGG | - | chr4.2:40425888-40425907 | MS.gene30551:intron | 50.0% |
!! | AGAAGAGGTGTCTTCCTTGG+TGG | - | chr4.2:40425891-40425910 | MS.gene30551:intron | 50.0% |
!! | GTTCAGGAATGATGGGTGGT+GGG | + | chr4.2:40424927-40424946 | None:intergenic | 50.0% |
!! | TGTTCAGGAATGATGGGTGG+TGG | + | chr4.2:40424928-40424947 | None:intergenic | 50.0% |
!! | TTGGACTAGTCCTCCCACAT+CGG | + | chr4.2:40425605-40425624 | None:intergenic | 50.0% |
ACAAGGCAGCCACGTGTACA+AGG | - | chr4.2:40423559-40423578 | MS.gene30551:intron | 55.0% | |
ACGTCATATGCCACGCAAGC+AGG | + | chr4.2:40425262-40425281 | None:intergenic | 55.0% | |
CAATTTGGTCCCTGCTTGCG+TGG | - | chr4.2:40425249-40425268 | MS.gene30551:intron | 55.0% | |
CGTCATATGCCACGCAAGCA+GGG | + | chr4.2:40425261-40425280 | None:intergenic | 55.0% | |
GACGTGGCAAGCTCTGTAAG+AGG | - | chr4.2:40425277-40425296 | MS.gene30551:CDS | 55.0% | |
TGATGCTACCCCACCAATGG+AGG | + | chr4.2:40423057-40423076 | None:intergenic | 55.0% | |
TGCTTGCGTGGCATATGACG+TGG | - | chr4.2:40425261-40425280 | MS.gene30551:CDS | 55.0% | |
! | AAGAGGGTGACGGTTTAGGC+TGG | + | chr4.2:40423733-40423752 | None:intergenic | 55.0% |
! | ATGACAGCTCTGGTCACTGG+TGG | - | chr4.2:40422078-40422097 | MS.gene30551:CDS | 55.0% |
! | CGGTGTTCAGGAATGATGGG+TGG | + | chr4.2:40424931-40424950 | None:intergenic | 55.0% |
! | CTAACGGTGCTTTTGGACGG+AGG | + | chr4.2:40423490-40423509 | None:intergenic | 55.0% |
! | CTGGTCACTGGTGGATCCAA+AGG | - | chr4.2:40422087-40422106 | MS.gene30551:CDS | 55.0% |
! | GCAGCAAGAGGGGTTCTGAT+TGG | + | chr4.2:40423300-40423319 | None:intergenic | 55.0% |
!! | AATGATGGGTGGTGGGCGTA+TGG | + | chr4.2:40424920-40424939 | None:intergenic | 55.0% |
!! | ATGATGGGTGGTGGGCGTAT+GGG | + | chr4.2:40424919-40424938 | None:intergenic | 55.0% |
!! | CCGTCCAAAAGCACCGTTAG+TGG | - | chr4.2:40423490-40423509 | MS.gene30551:intron | 55.0% |
!! | GGACGGAGGGACTGATTTGA+TGG | + | chr4.2:40423476-40423495 | None:intergenic | 55.0% |
TCATCACCGGCGATCAACCG+TGG | - | chr4.2:40423772-40423791 | MS.gene30551:intron | 60.0% | |
! | AGAGGGGTTCTGATTGGCCC+TGG | + | chr4.2:40423294-40423313 | None:intergenic | 60.0% |
! | GGGATGACAGCTCTGGTCAC+TGG | - | chr4.2:40422075-40422094 | MS.gene30551:CDS | 60.0% |
! | GGGTGACGGTTTAGGCTGGA+AGG | + | chr4.2:40423729-40423748 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 40422027 | 40426005 | 40422027 | ID=MS.gene30551 |
chr4.2 | mRNA | 40422027 | 40426005 | 40422027 | ID=MS.gene30551.t1;Parent=MS.gene30551 |
chr4.2 | exon | 40425917 | 40426005 | 40425917 | ID=MS.gene30551.t1.exon1;Parent=MS.gene30551.t1 |
chr4.2 | CDS | 40425917 | 40426005 | 40425917 | ID=cds.MS.gene30551.t1;Parent=MS.gene30551.t1 |
chr4.2 | exon | 40425257 | 40425464 | 40425257 | ID=MS.gene30551.t1.exon2;Parent=MS.gene30551.t1 |
chr4.2 | CDS | 40425257 | 40425464 | 40425257 | ID=cds.MS.gene30551.t1;Parent=MS.gene30551.t1 |
chr4.2 | exon | 40424922 | 40425138 | 40424922 | ID=MS.gene30551.t1.exon3;Parent=MS.gene30551.t1 |
chr4.2 | CDS | 40424922 | 40425138 | 40424922 | ID=cds.MS.gene30551.t1;Parent=MS.gene30551.t1 |
chr4.2 | exon | 40424709 | 40424815 | 40424709 | ID=MS.gene30551.t1.exon4;Parent=MS.gene30551.t1 |
chr4.2 | CDS | 40424709 | 40424815 | 40424709 | ID=cds.MS.gene30551.t1;Parent=MS.gene30551.t1 |
chr4.2 | exon | 40422027 | 40422209 | 40422027 | ID=MS.gene30551.t1.exon5;Parent=MS.gene30551.t1 |
chr4.2 | CDS | 40422027 | 40422209 | 40422027 | ID=cds.MS.gene30551.t1;Parent=MS.gene30551.t1 |
Gene Sequence |
Protein sequence |