Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49664.t1 | XP_003613484.1 | 100 | 306 | 0 | 0 | 1 | 306 | 1 | 306 | 8.70E-185 | 656 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49664.t1 | Q9ZSE4 | 96.4 | 306 | 11 | 0 | 1 | 306 | 1 | 306 | 1.1e-180 | 633.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49664.t1 | G7K710 | 100.0 | 306 | 0 | 0 | 1 | 306 | 1 | 306 | 6.3e-185 | 656.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049283 | MS.gene49664 | 0.860678 | 1.75E-63 | -1.69E-46 |
MS.gene049499 | MS.gene49664 | 0.800741 | 1.25E-48 | -1.69E-46 |
MS.gene049807 | MS.gene49664 | 0.80113 | 1.04E-48 | -1.69E-46 |
MS.gene049983 | MS.gene49664 | 0.840758 | 7.17E-58 | -1.69E-46 |
MS.gene050085 | MS.gene49664 | 0.811505 | 6.77E-51 | -1.69E-46 |
MS.gene050213 | MS.gene49664 | 0.804564 | 2.03E-49 | -1.69E-46 |
MS.gene050359 | MS.gene49664 | 0.854563 | 1.13E-61 | -1.69E-46 |
MS.gene050384 | MS.gene49664 | 0.81367 | 2.28E-51 | -1.69E-46 |
MS.gene050386 | MS.gene49664 | 0.818265 | 2.14E-52 | -1.69E-46 |
MS.gene050414 | MS.gene49664 | 0.839422 | 1.60E-57 | -1.69E-46 |
MS.gene050646 | MS.gene49664 | 0.867595 | 1.22E-65 | -1.69E-46 |
MS.gene050654 | MS.gene49664 | 0.852786 | 3.67E-61 | -1.69E-46 |
MS.gene050752 | MS.gene49664 | 0.812047 | 5.16E-51 | -1.69E-46 |
MS.gene050838 | MS.gene49664 | 0.801867 | 7.35E-49 | -1.69E-46 |
MS.gene050931 | MS.gene49664 | 0.833398 | 5.46E-56 | -1.69E-46 |
MS.gene050945 | MS.gene49664 | 0.850606 | 1.52E-60 | -1.69E-46 |
MS.gene051003 | MS.gene49664 | 0.840913 | 6.53E-58 | -1.69E-46 |
MS.gene051043 | MS.gene49664 | 0.827875 | 1.23E-54 | -1.69E-46 |
MS.gene051233 | MS.gene49664 | 0.800847 | 1.19E-48 | -1.69E-46 |
MS.gene051234 | MS.gene49664 | 0.886294 | 3.88E-72 | -1.69E-46 |
MS.gene051343 | MS.gene49664 | 0.818856 | 1.58E-52 | -1.69E-46 |
MS.gene051381 | MS.gene49664 | 0.845433 | 4.07E-59 | -1.69E-46 |
MS.gene051902 | MS.gene49664 | 0.807552 | 4.78E-50 | -1.69E-46 |
MS.gene052072 | MS.gene49664 | 0.833514 | 5.11E-56 | -1.69E-46 |
MS.gene052242 | MS.gene49664 | -0.822725 | 2.03E-53 | -1.69E-46 |
MS.gene052307 | MS.gene49664 | 0.834449 | 2.98E-56 | -1.69E-46 |
MS.gene052335 | MS.gene49664 | 0.801629 | 8.23E-49 | -1.69E-46 |
MS.gene052342 | MS.gene49664 | 0.815824 | 7.58E-52 | -1.69E-46 |
MS.gene052463 | MS.gene49664 | 0.804625 | 1.97E-49 | -1.69E-46 |
MS.gene052533 | MS.gene49664 | 0.8219 | 3.16E-53 | -1.69E-46 |
MS.gene052609 | MS.gene49664 | 0.833868 | 4.17E-56 | -1.69E-46 |
MS.gene052932 | MS.gene49664 | 0.831676 | 1.46E-55 | -1.69E-46 |
MS.gene053058 | MS.gene49664 | 0.836188 | 1.08E-56 | -1.69E-46 |
MS.gene053143 | MS.gene49664 | 0.829517 | 4.92E-55 | -1.69E-46 |
MS.gene053456 | MS.gene49664 | 0.844707 | 6.40E-59 | -1.69E-46 |
MS.gene053564 | MS.gene49664 | 0.800575 | 1.35E-48 | -1.69E-46 |
MS.gene053726 | MS.gene49664 | 0.812471 | 4.17E-51 | -1.69E-46 |
MS.gene054004 | MS.gene49664 | 0.829269 | 5.66E-55 | -1.69E-46 |
MS.gene054178 | MS.gene49664 | 0.807206 | 5.66E-50 | -1.69E-46 |
MS.gene054403 | MS.gene49664 | 0.812585 | 3.94E-51 | -1.69E-46 |
MS.gene054413 | MS.gene49664 | 0.813924 | 2.00E-51 | -1.69E-46 |
MS.gene054892 | MS.gene49664 | 0.819196 | 1.32E-52 | -1.69E-46 |
MS.gene054893 | MS.gene49664 | 0.824516 | 7.74E-54 | -1.69E-46 |
MS.gene054957 | MS.gene49664 | 0.828296 | 9.73E-55 | -1.69E-46 |
MS.gene055513 | MS.gene49664 | 0.818331 | 2.07E-52 | -1.69E-46 |
MS.gene056045 | MS.gene49664 | 0.81075 | 9.87E-51 | -1.69E-46 |
MS.gene056097 | MS.gene49664 | 0.882991 | 6.54E-71 | -1.69E-46 |
MS.gene056181 | MS.gene49664 | 0.828107 | 1.08E-54 | -1.69E-46 |
MS.gene056578 | MS.gene49664 | 0.824954 | 6.10E-54 | -1.69E-46 |
MS.gene056699 | MS.gene49664 | 0.833177 | 6.19E-56 | -1.69E-46 |
MS.gene057102 | MS.gene49664 | 0.820744 | 5.83E-53 | -1.69E-46 |
MS.gene057174 | MS.gene49664 | 0.800297 | 1.54E-48 | -1.69E-46 |
MS.gene057622 | MS.gene49664 | 0.812355 | 4.42E-51 | -1.69E-46 |
MS.gene05781 | MS.gene49664 | 0.804661 | 1.94E-49 | -1.69E-46 |
MS.gene057919 | MS.gene49664 | 0.812132 | 4.94E-51 | -1.69E-46 |
MS.gene058054 | MS.gene49664 | 0.810156 | 1.33E-50 | -1.69E-46 |
MS.gene058781 | MS.gene49664 | 0.815396 | 9.44E-52 | -1.69E-46 |
MS.gene059007 | MS.gene49664 | 0.822764 | 1.99E-53 | -1.69E-46 |
MS.gene059146 | MS.gene49664 | 0.858656 | 7.09E-63 | -1.69E-46 |
MS.gene059170 | MS.gene49664 | 0.805854 | 1.09E-49 | -1.69E-46 |
MS.gene059590 | MS.gene49664 | 0.806974 | 6.34E-50 | -1.69E-46 |
MS.gene059778 | MS.gene49664 | 0.804056 | 2.59E-49 | -1.69E-46 |
MS.gene05985 | MS.gene49664 | -0.804867 | 1.76E-49 | -1.69E-46 |
MS.gene059965 | MS.gene49664 | 0.813207 | 2.88E-51 | -1.69E-46 |
MS.gene060259 | MS.gene49664 | 0.815261 | 1.01E-51 | -1.69E-46 |
MS.gene060932 | MS.gene49664 | 0.816317 | 5.89E-52 | -1.69E-46 |
MS.gene060933 | MS.gene49664 | 0.825342 | 4.94E-54 | -1.69E-46 |
MS.gene060935 | MS.gene49664 | 0.830786 | 2.41E-55 | -1.69E-46 |
MS.gene060937 | MS.gene49664 | 0.853416 | 2.43E-61 | -1.69E-46 |
MS.gene061100 | MS.gene49664 | 0.822788 | 1.96E-53 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49664.t1 | MTR_5g037200 | 100.000 | 306 | 0 | 0 | 1 | 306 | 1 | 306 | 0.0 | 642 |
MS.gene49664.t1 | MTR_8g062430 | 97.386 | 306 | 8 | 0 | 1 | 306 | 1 | 306 | 0.0 | 626 |
MS.gene49664.t1 | MTR_8g085610 | 80.263 | 304 | 60 | 0 | 3 | 306 | 5 | 308 | 0.0 | 534 |
MS.gene49664.t1 | MTR_7g107310 | 79.070 | 301 | 63 | 0 | 6 | 306 | 13 | 313 | 0.0 | 522 |
MS.gene49664.t1 | MTR_8g085610 | 81.915 | 282 | 51 | 0 | 25 | 306 | 3 | 284 | 0.0 | 504 |
MS.gene49664.t1 | MTR_5g093990 | 66.118 | 304 | 101 | 2 | 5 | 306 | 2 | 305 | 1.54e-152 | 429 |
MS.gene49664.t1 | MTR_5g037200 | 100.000 | 186 | 0 | 0 | 1 | 186 | 1 | 186 | 2.15e-136 | 385 |
MS.gene49664.t1 | MTR_1g039380 | 55.960 | 302 | 132 | 1 | 6 | 306 | 2 | 303 | 8.03e-128 | 367 |
MS.gene49664.t1 | MTR_1g039380 | 58.484 | 277 | 114 | 1 | 31 | 306 | 3 | 279 | 2.54e-123 | 354 |
MS.gene49664.t1 | MTR_1g079950 | 45.819 | 299 | 153 | 3 | 4 | 294 | 3 | 300 | 2.96e-95 | 285 |
MS.gene49664.t1 | MTR_1g079950 | 45.819 | 299 | 153 | 3 | 4 | 294 | 3 | 300 | 3.16e-95 | 285 |
MS.gene49664.t1 | MTR_1g079950 | 45.819 | 299 | 153 | 3 | 4 | 294 | 3 | 300 | 3.48e-95 | 285 |
MS.gene49664.t1 | MTR_7g112870 | 46.154 | 299 | 154 | 3 | 7 | 299 | 10 | 307 | 4.64e-95 | 284 |
MS.gene49664.t1 | MTR_1g079950 | 45.819 | 299 | 153 | 3 | 4 | 294 | 32 | 329 | 5.54e-95 | 285 |
MS.gene49664.t1 | MTR_5g081230 | 46.102 | 295 | 152 | 3 | 6 | 294 | 24 | 317 | 3.99e-94 | 281 |
MS.gene49664.t1 | MTR_7g116380 | 47.826 | 276 | 142 | 2 | 20 | 294 | 26 | 300 | 5.71e-94 | 281 |
MS.gene49664.t1 | MTR_7g116380 | 47.826 | 276 | 142 | 2 | 20 | 294 | 26 | 300 | 7.59e-94 | 281 |
MS.gene49664.t1 | MTR_8g098980 | 48.679 | 265 | 134 | 2 | 20 | 283 | 27 | 290 | 2.02e-93 | 280 |
MS.gene49664.t1 | MTR_1g074880 | 48.175 | 274 | 140 | 2 | 20 | 292 | 26 | 298 | 1.71e-91 | 275 |
MS.gene49664.t1 | MTR_1g074880 | 48.175 | 274 | 140 | 2 | 20 | 292 | 26 | 298 | 1.82e-91 | 275 |
MS.gene49664.t1 | MTR_8g005010 | 44.483 | 290 | 152 | 3 | 7 | 288 | 4 | 292 | 1.87e-91 | 274 |
MS.gene49664.t1 | MTR_1g043240 | 45.804 | 286 | 153 | 2 | 20 | 304 | 26 | 310 | 2.47e-91 | 275 |
MS.gene49664.t1 | MTR_1g079950 | 48.617 | 253 | 125 | 3 | 54 | 302 | 34 | 285 | 2.38e-83 | 254 |
MS.gene49664.t1 | MTR_1g074880 | 50.622 | 241 | 117 | 2 | 53 | 292 | 4 | 243 | 1.28e-82 | 250 |
MS.gene49664.t1 | MTR_1g074880 | 50.622 | 241 | 117 | 2 | 53 | 292 | 4 | 243 | 1.38e-82 | 250 |
MS.gene49664.t1 | MTR_4g050540 | 39.792 | 289 | 160 | 5 | 24 | 298 | 673 | 961 | 7.60e-60 | 206 |
MS.gene49664.t1 | MTR_3g452710 | 42.449 | 245 | 135 | 5 | 50 | 290 | 222 | 464 | 1.58e-59 | 197 |
MS.gene49664.t1 | MTR_2g100130 | 37.884 | 293 | 171 | 7 | 7 | 290 | 93 | 383 | 5.77e-59 | 194 |
MS.gene49664.t1 | MTR_3g452710 | 42.449 | 245 | 135 | 5 | 50 | 290 | 289 | 531 | 8.36e-59 | 197 |
MS.gene49664.t1 | MTR_2g087530 | 39.932 | 293 | 155 | 8 | 24 | 298 | 555 | 844 | 3.76e-58 | 200 |
MS.gene49664.t1 | MTR_2g100130 | 37.884 | 293 | 171 | 7 | 7 | 290 | 192 | 482 | 5.35e-58 | 194 |
MS.gene49664.t1 | MTR_2g087530 | 39.932 | 293 | 155 | 8 | 24 | 298 | 668 | 957 | 5.83e-58 | 201 |
MS.gene49664.t1 | MTR_2g100130 | 37.884 | 293 | 171 | 7 | 7 | 290 | 163 | 453 | 6.21e-58 | 193 |
MS.gene49664.t1 | MTR_2g100130 | 37.884 | 293 | 171 | 7 | 7 | 290 | 202 | 492 | 6.77e-58 | 194 |
MS.gene49664.t1 | MTR_1g089370 | 41.825 | 263 | 139 | 5 | 24 | 272 | 552 | 814 | 1.55e-57 | 199 |
MS.gene49664.t1 | MTR_2g100130 | 37.931 | 290 | 169 | 7 | 7 | 287 | 202 | 489 | 1.02e-56 | 191 |
MS.gene49664.t1 | MTR_2g100130 | 37.931 | 290 | 168 | 8 | 7 | 287 | 202 | 488 | 2.68e-55 | 187 |
MS.gene49664.t1 | MTR_2g100130 | 37.931 | 290 | 168 | 8 | 7 | 287 | 163 | 449 | 3.68e-55 | 186 |
MS.gene49664.t1 | MTR_2g100130 | 44.749 | 219 | 115 | 5 | 49 | 263 | 248 | 464 | 2.45e-54 | 184 |
MS.gene49664.t1 | MTR_2g100160 | 40.891 | 247 | 139 | 6 | 49 | 290 | 158 | 402 | 2.37e-53 | 180 |
MS.gene49664.t1 | MTR_8g072600 | 32.414 | 290 | 141 | 10 | 26 | 262 | 107 | 394 | 2.08e-31 | 122 |
MS.gene49664.t1 | MTR_8g072600 | 33.333 | 252 | 120 | 8 | 20 | 225 | 93 | 342 | 1.52e-27 | 110 |
MS.gene49664.t1 | MTR_2g099710 | 31.010 | 287 | 124 | 12 | 25 | 262 | 211 | 472 | 1.03e-21 | 95.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49664.t1 | AT1G10430 | 94.771 | 306 | 16 | 0 | 1 | 306 | 1 | 306 | 0.0 | 617 |
MS.gene49664.t1 | AT1G10430 | 94.771 | 306 | 16 | 0 | 1 | 306 | 1 | 306 | 0.0 | 617 |
MS.gene49664.t1 | AT1G59830 | 94.444 | 306 | 17 | 0 | 1 | 306 | 1 | 306 | 0.0 | 612 |
MS.gene49664.t1 | AT1G69960 | 91.803 | 305 | 25 | 0 | 2 | 306 | 3 | 307 | 0.0 | 599 |
MS.gene49664.t1 | AT2G42500 | 80.066 | 301 | 60 | 0 | 6 | 306 | 13 | 313 | 0.0 | 526 |
MS.gene49664.t1 | AT3G58500 | 78.571 | 308 | 64 | 1 | 1 | 306 | 6 | 313 | 0.0 | 525 |
MS.gene49664.t1 | AT1G59830 | 93.281 | 253 | 17 | 0 | 1 | 253 | 1 | 253 | 5.41e-180 | 497 |
MS.gene49664.t1 | AT5G55260 | 66.118 | 304 | 101 | 2 | 5 | 306 | 2 | 305 | 3.06e-154 | 434 |
MS.gene49664.t1 | AT4G26720 | 65.461 | 304 | 103 | 2 | 5 | 306 | 2 | 305 | 1.30e-153 | 432 |
MS.gene49664.t1 | AT2G42500 | 68.771 | 301 | 47 | 1 | 6 | 306 | 13 | 266 | 2.72e-153 | 430 |
MS.gene49664.t1 | AT5G55260 | 58.261 | 345 | 101 | 3 | 5 | 306 | 2 | 346 | 9.71e-146 | 414 |
MS.gene49664.t1 | AT3G19980 | 55.960 | 302 | 132 | 1 | 6 | 306 | 2 | 303 | 1.69e-127 | 366 |
MS.gene49664.t1 | AT1G50370 | 55.298 | 302 | 134 | 1 | 6 | 306 | 2 | 303 | 2.66e-126 | 363 |
MS.gene49664.t1 | AT2G29400 | 47.253 | 273 | 143 | 1 | 20 | 292 | 43 | 314 | 7.15e-96 | 286 |
MS.gene49664.t1 | AT2G39840 | 47.119 | 295 | 149 | 3 | 6 | 294 | 21 | 314 | 9.48e-96 | 286 |
MS.gene49664.t1 | AT5G27840 | 47.635 | 296 | 148 | 3 | 1 | 290 | 8 | 302 | 1.40e-94 | 283 |
MS.gene49664.t1 | AT5G27840 | 47.635 | 296 | 148 | 3 | 1 | 290 | 8 | 302 | 2.24e-94 | 283 |
MS.gene49664.t1 | AT5G27840 | 47.635 | 296 | 148 | 3 | 1 | 290 | 8 | 302 | 2.37e-94 | 282 |
MS.gene49664.t1 | AT5G27840 | 47.635 | 296 | 148 | 3 | 1 | 290 | 8 | 302 | 2.37e-94 | 282 |
MS.gene49664.t1 | AT3G05580 | 47.586 | 290 | 145 | 3 | 7 | 290 | 14 | 302 | 2.36e-93 | 280 |
MS.gene49664.t1 | AT1G64040 | 49.434 | 265 | 132 | 2 | 20 | 283 | 27 | 290 | 3.89e-93 | 279 |
MS.gene49664.t1 | AT5G43380 | 46.667 | 285 | 143 | 3 | 7 | 283 | 6 | 289 | 3.64e-91 | 275 |
MS.gene49664.t1 | AT5G59160 | 46.350 | 274 | 145 | 2 | 20 | 292 | 36 | 308 | 5.35e-91 | 273 |
MS.gene49664.t1 | AT5G59160 | 46.350 | 274 | 145 | 2 | 20 | 292 | 36 | 308 | 5.35e-91 | 273 |
MS.gene49664.t1 | AT5G59160 | 46.350 | 274 | 145 | 2 | 20 | 292 | 36 | 308 | 5.35e-91 | 273 |
MS.gene49664.t1 | AT5G43380 | 46.667 | 285 | 143 | 3 | 7 | 283 | 6 | 289 | 5.58e-91 | 274 |
MS.gene49664.t1 | AT4G11240 | 47.547 | 265 | 137 | 2 | 20 | 283 | 27 | 290 | 6.46e-91 | 273 |
MS.gene49664.t1 | AT5G43380 | 46.667 | 285 | 143 | 3 | 7 | 283 | 6 | 289 | 7.04e-91 | 273 |
MS.gene49664.t1 | AT3G46820 | 45.620 | 274 | 147 | 2 | 20 | 292 | 36 | 308 | 6.13e-89 | 268 |
MS.gene49664.t1 | AT2G42500 | 73.214 | 168 | 40 | 2 | 1 | 163 | 6 | 173 | 2.94e-84 | 251 |
MS.gene49664.t1 | AT2G42500 | 75.625 | 160 | 34 | 2 | 1 | 155 | 6 | 165 | 4.92e-83 | 248 |
MS.gene49664.t1 | AT2G42500 | 70.857 | 175 | 44 | 3 | 1 | 170 | 6 | 178 | 1.20e-82 | 247 |
MS.gene49664.t1 | AT3G05580 | 49.187 | 246 | 118 | 3 | 1 | 240 | 8 | 252 | 4.42e-80 | 243 |
MS.gene49664.t1 | AT2G42810 | 42.537 | 268 | 144 | 6 | 31 | 290 | 201 | 466 | 1.05e-63 | 209 |
MS.gene49664.t1 | AT2G42810 | 42.537 | 268 | 144 | 6 | 31 | 290 | 201 | 466 | 1.05e-63 | 209 |
MS.gene49664.t1 | AT2G42810 | 42.537 | 268 | 144 | 6 | 31 | 290 | 201 | 466 | 1.05e-63 | 209 |
MS.gene49664.t1 | AT2G42810 | 42.537 | 268 | 144 | 6 | 31 | 290 | 255 | 520 | 4.00e-63 | 208 |
MS.gene49664.t1 | AT2G42810 | 42.537 | 268 | 144 | 6 | 31 | 290 | 254 | 519 | 4.31e-63 | 208 |
MS.gene49664.t1 | AT4G03080 | 41.481 | 270 | 144 | 5 | 24 | 279 | 554 | 823 | 5.91e-60 | 205 |
MS.gene49664.t1 | AT1G03445 | 41.328 | 271 | 142 | 7 | 24 | 279 | 480 | 748 | 1.36e-59 | 203 |
MS.gene49664.t1 | AT1G03445 | 41.328 | 271 | 142 | 7 | 24 | 279 | 480 | 748 | 1.64e-59 | 203 |
MS.gene49664.t1 | AT2G27210 | 39.655 | 290 | 160 | 6 | 24 | 298 | 674 | 963 | 1.20e-58 | 202 |
MS.gene49664.t1 | AT2G27210 | 39.655 | 290 | 160 | 6 | 24 | 298 | 679 | 968 | 1.22e-58 | 202 |
MS.gene49664.t1 | AT1G08420 | 40.741 | 270 | 146 | 5 | 24 | 279 | 685 | 954 | 4.25e-58 | 201 |
MS.gene49664.t1 | AT1G08420 | 40.741 | 270 | 146 | 5 | 24 | 279 | 690 | 959 | 4.49e-58 | 201 |
MS.gene49664.t1 | AT5G63870 | 32.353 | 306 | 142 | 11 | 49 | 291 | 79 | 382 | 1.71e-31 | 122 |
MS.gene49664.t1 | AT5G63870 | 32.353 | 306 | 142 | 11 | 49 | 291 | 79 | 382 | 1.71e-31 | 122 |
MS.gene49664.t1 | AT5G63870 | 36.449 | 214 | 97 | 7 | 49 | 225 | 79 | 290 | 2.34e-28 | 111 |
MS.gene49664.t1 | AT1G48120 | 32.087 | 321 | 148 | 11 | 32 | 283 | 635 | 954 | 1.48e-26 | 110 |
MS.gene49664.t1 | AT5G10900 | 28.514 | 249 | 143 | 9 | 20 | 239 | 191 | 433 | 8.15e-19 | 87.0 |
MS.gene49664.t1 | AT5G10900 | 28.514 | 249 | 143 | 9 | 20 | 239 | 191 | 433 | 9.24e-19 | 87.0 |
MS.gene49664.t1 | AT5G10900 | 28.514 | 249 | 143 | 9 | 20 | 239 | 191 | 433 | 9.53e-19 | 87.0 |
Find 83 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGATACTAATTATCTCTTTA+TGG | 0.113568 | 5.1:+27854832 | MS.gene49664:CDS |
CCACATCGGTAGCAGTAATT+TGG | 0.207567 | 5.1:-27858427 | None:intergenic |
GATGAATGCTTGAGAAAATA+TGG | 0.265964 | 5.1:+27857455 | MS.gene49664:CDS |
AGTGGAGACTGTTTCACTTT+TGG | 0.279854 | 5.1:+27856735 | MS.gene49664:CDS |
ATGGCTGCCATTCTGGAAAT+TGG | 0.280680 | 5.1:+27858454 | MS.gene49664:CDS |
TGGGAATATGGCTGCCATTC+TGG | 0.284450 | 5.1:+27858447 | MS.gene49664:CDS |
GATACTAATTATCTCTTTAT+GGG | 0.296309 | 5.1:+27854833 | MS.gene49664:CDS |
CTGCTACCGATGTGGGAATA+TGG | 0.319446 | 5.1:+27858435 | MS.gene49664:CDS |
TGGAGGTCTCTCACCATCTT+TGG | 0.327030 | 5.1:+27857639 | MS.gene49664:CDS |
TCTGGAAATTGGAGAGAATA+TGG | 0.342558 | 5.1:+27858465 | MS.gene49664:CDS |
CATGGAGTGCAAGCCTTTAC+CGG | 0.348936 | 5.1:+27854655 | MS.gene49664:CDS |
GACTGCCCTCATTGAGAGTC+AGG | 0.351563 | 5.1:+27857529 | MS.gene49664:CDS |
ACCGGTGAAGTGTCCGGTTA+CGG | 0.359368 | 5.1:+27854742 | MS.gene49664:CDS |
CCCAGACGATCGTTGTGGTT+GGG | 0.364879 | 5.1:+27858158 | MS.gene49664:CDS |
GGCTCAATTTGCCTTGGAGC+TGG | 0.369766 | 5.1:-27858511 | None:intergenic |
CCCCAACCACAACGATCGTC+TGG | 0.379839 | 5.1:-27858159 | None:intergenic |
GAGATAGAATTACAATTCTC+AGG | 0.380189 | 5.1:+27856779 | MS.gene49664:CDS |
ACGGTTTGTGGTGATATTCA+TGG | 0.413148 | 5.1:+27854761 | MS.gene49664:CDS |
CTTACACTTGAGTAATTTGA+CGG | 0.424338 | 5.1:-27856816 | None:intergenic |
TTCACATCCGCCTCCGGTAA+AGG | 0.440700 | 5.1:-27854668 | None:intergenic |
ATATCACCACAAACCGTAAC+CGG | 0.441931 | 5.1:-27854755 | None:intergenic |
AAGTGTCCGGTTACGGTTTG+TGG | 0.441934 | 5.1:+27854749 | MS.gene49664:CDS |
CCAGACGATCGTTGTGGTTG+GGG | 0.450228 | 5.1:+27858159 | MS.gene49664:CDS |
AATATGGAAATGCCAATGTC+TGG | 0.452706 | 5.1:+27857471 | MS.gene49664:CDS |
CGTGGTGCTGGATATACGTT+TGG | 0.454119 | 5.1:+27858192 | MS.gene49664:CDS |
GGTATATCTCCACGTGGTGC+TGG | 0.461540 | 5.1:+27858180 | MS.gene49664:CDS |
CGTTCAACCGGTGAAGTGTC+CGG | 0.468440 | 5.1:+27854736 | MS.gene49664:CDS |
CCGCGCCTTGGATCGCATAC+AGG | 0.472606 | 5.1:+27857678 | MS.gene49664:CDS |
TGAGGAATGGAACGTTCAAC+CGG | 0.483631 | 5.1:+27854724 | MS.gene49664:CDS |
GGTGTCTTTCGTGTAGTGTC+AGG | 0.485525 | 5.1:-27858532 | None:intergenic |
CTCTTTATGGGAGATTATGT+AGG | 0.493968 | 5.1:+27854845 | MS.gene49664:CDS |
ACCCAGACGATCGTTGTGGT+TGG | 0.495708 | 5.1:+27858157 | MS.gene49664:CDS |
GTGTCAGGCTCAATTTGCCT+TGG | 0.498966 | 5.1:-27858517 | None:intergenic |
AGCGCCTTCACATCCGCCTC+CGG | 0.505019 | 5.1:-27854674 | None:intergenic |
GGGCGATTCTTGTTGAGGAA+TGG | 0.507448 | 5.1:+27854711 | MS.gene49664:CDS |
GGTAAAGAATTTCCAGACAT+TGG | 0.508637 | 5.1:-27857483 | None:intergenic |
ATTCTCTCCAATTTCCAGAA+TGG | 0.510452 | 5.1:-27858461 | None:intergenic |
TCGGATTGGTGGAAATGCTC+CGG | 0.512157 | 5.1:+27854811 | MS.gene49664:CDS |
TCAATATAGGTTCCGCATGA+AGG | 0.513509 | 5.1:+27858108 | MS.gene49664:intron |
AGGTAAATAATCAAACAAAT+CGG | 0.517054 | 5.1:-27857504 | None:intergenic |
ATAAAGAGATAATTAGTATC+CGG | 0.517202 | 5.1:-27854830 | None:intergenic |
GCTCAGTTCAATCACACAAA+TGG | 0.518477 | 5.1:+27858228 | MS.gene49664:CDS |
CCAAATTACTGCTACCGATG+TGG | 0.523948 | 5.1:+27858427 | MS.gene49664:CDS |
ACTGGATAATATCCGCGCCT+TGG | 0.529586 | 5.1:+27857666 | MS.gene49664:CDS |
CAAATTACTGCTACCGATGT+GGG | 0.532060 | 5.1:+27858428 | MS.gene49664:CDS |
GTGCAAGCCTTTACCGGAGG+CGG | 0.534349 | 5.1:+27854661 | MS.gene49664:CDS |
TCGGCAGATCGAGAGTCTCA+TGG | 0.543255 | 5.1:+27854637 | MS.gene49664:CDS |
CTCACCATCTTTGGATACAC+TGG | 0.543454 | 5.1:+27857648 | MS.gene49664:CDS |
AGCGAGGGCGATTCTTGTTG+AGG | 0.545800 | 5.1:+27854706 | MS.gene49664:CDS |
TTATCCAGTGTATCCAAAGA+TGG | 0.549296 | 5.1:-27857652 | None:intergenic |
TTTACCGGAGGCGGATGTGA+AGG | 0.556113 | 5.1:+27854670 | MS.gene49664:CDS |
CGATCCAGATCCGCGTGTGA+CGG | 0.559405 | 5.1:-27854617 | None:intergenic |
TGCTGGATATACGTTTGGAC+AGG | 0.564091 | 5.1:+27858197 | MS.gene49664:CDS |
ACCGTAACCGGACACTTCAC+CGG | 0.565155 | 5.1:-27854743 | None:intergenic |
GGCGCTATGCGATCAAGCGA+GGG | 0.566727 | 5.1:+27854691 | MS.gene49664:CDS |
TAGAGCTCATCAGCTTGTGA+TGG | 0.570025 | 5.1:+27858266 | MS.gene49664:CDS |
AGATAGAATTACAATTCTCA+GGG | 0.575342 | 5.1:+27856780 | MS.gene49664:CDS |
CATAAATTTATGCAGATCGT+GGG | 0.576093 | 5.1:+27856704 | MS.gene49664:intron |
GACCAATGTGTGATCTCTTG+TGG | 0.576863 | 5.1:+27858130 | MS.gene49664:CDS |
CGTCACACGCGGATCTGGAT+CGG | 0.578779 | 5.1:+27854618 | MS.gene49664:CDS |
CCCAACCACAACGATCGTCT+GGG | 0.580244 | 5.1:-27858158 | None:intergenic |
GCTCATCAGCTTGTGATGGA+AGG | 0.582864 | 5.1:+27858270 | MS.gene49664:CDS |
TGCAGTTTGATCCAGCTCCA+AGG | 0.585413 | 5.1:+27858500 | MS.gene49664:CDS |
AACCTCCTGTATGCGATCCA+AGG | 0.586881 | 5.1:-27857683 | None:intergenic |
TTCAAACCTGACTCTCAATG+AGG | 0.590959 | 5.1:-27857535 | None:intergenic |
AGGCGCTATGCGATCAAGCG+AGG | 0.591197 | 5.1:+27854690 | MS.gene49664:CDS |
TTCAACCATGCCGTCACACG+CGG | 0.601853 | 5.1:+27854607 | None:intergenic |
CGCCTTGGATCGCATACAGG+AGG | 0.602261 | 5.1:+27857681 | MS.gene49664:CDS |
TCAAACCTGACTCTCAATGA+GGG | 0.610004 | 5.1:-27857534 | None:intergenic |
TTGTGATGGAAGGATACAAT+TGG | 0.613571 | 5.1:+27858280 | MS.gene49664:CDS |
CTCTCAATGAGGGCAGTCAG+AGG | 0.620691 | 5.1:-27857524 | None:intergenic |
GGAAGGATACAATTGGTGCC+AGG | 0.622019 | 5.1:+27858287 | MS.gene49664:CDS |
TGACACTACACGAAAGACAC+CGG | 0.642789 | 5.1:+27858534 | MS.gene49664:CDS |
TCACACATTGGTCCTTCATG+CGG | 0.659593 | 5.1:-27858120 | None:intergenic |
CCTGTATGCGATCCAAGGCG+CGG | 0.673253 | 5.1:-27857678 | None:intergenic |
GGAGTGCAAGCCTTTACCGG+AGG | 0.673342 | 5.1:+27854658 | MS.gene49664:CDS |
TGGCAGCCATATTCCCACAT+CGG | 0.677796 | 5.1:-27858441 | None:intergenic |
AGATCGTGGGTACTATTCAG+TGG | 0.679198 | 5.1:+27856717 | MS.gene49664:intron |
TCTGACCCAGACGATCGTTG+TGG | 0.702404 | 5.1:+27858153 | MS.gene49664:CDS |
AACGTATATCCAGCACCACG+TGG | 0.705317 | 5.1:-27858189 | None:intergenic |
GATAGAATTACAATTCTCAG+GGG | 0.726280 | 5.1:+27856781 | MS.gene49664:CDS |
GACCACAAGAGATCACACAT+TGG | 0.731997 | 5.1:-27858132 | None:intergenic |
GGTTGGGGTATATCTCCACG+TGG | 0.804235 | 5.1:+27858174 | MS.gene49664:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAAATGAAATATTAAATGA+GGG | - | chr5.1:27858021-27858040 | None:intergenic | 15.0% |
!! | CTATAAATTATAACACAATA+CGG | - | chr5.1:27855907-27855926 | None:intergenic | 15.0% |
!! | TAGTATCAAATAATTTACAT+TGG | - | chr5.1:27857749-27857768 | None:intergenic | 15.0% |
!! | TATTGAGTTTGATATATTAT+TGG | + | chr5.1:27855306-27855325 | MS.gene49664:intron | 15.0% |
!! | TTGAATATAAGAAACATAAA+AGG | + | chr5.1:27857375-27857394 | MS.gene49664:intron | 15.0% |
!!! | AGGTTAATTTGATTTATTTA+GGG | + | chr5.1:27854917-27854936 | MS.gene49664:intron | 15.0% |
!!! | ATAGTTATTTCAGTTTTATA+AGG | + | chr5.1:27855271-27855290 | MS.gene49664:intron | 15.0% |
!!! | TAAGGTTTGATTTTTTATTT+TGG | + | chr5.1:27855155-27855174 | MS.gene49664:intron | 15.0% |
!!! | TATATATAGTGTTTTGTTTT+CGG | + | chr5.1:27854975-27854994 | MS.gene49664:intron | 15.0% |
!!! | TTTGTAGTTTAATTTTGATA+CGG | + | chr5.1:27855642-27855661 | MS.gene49664:intron | 15.0% |
!! | AAATTTATGCCAGAATTATT+AGG | - | chr5.1:27856693-27856712 | None:intergenic | 20.0% |
!! | AGGTAAATAATCAAACAAAT+CGG | - | chr5.1:27857507-27857526 | None:intergenic | 20.0% |
!! | ATAAAGAGATAATTAGTATC+CGG | - | chr5.1:27854833-27854852 | None:intergenic | 20.0% |
!! | CAGAAATGAAATATTAAATG+AGG | - | chr5.1:27858022-27858041 | None:intergenic | 20.0% |
!! | GATACTAATTATCTCTTTAT+GGG | + | chr5.1:27854833-27854852 | MS.gene49664:CDS | 20.0% |
!! | TATTAAATGGCTATTATAAC+TGG | + | chr5.1:27857713-27857732 | MS.gene49664:intron | 20.0% |
!!! | ACAATTTTGCTTTTCAATAT+AGG | + | chr5.1:27858095-27858114 | MS.gene49664:intron | 20.0% |
!!! | ACTTGTCTTTTTATTTTTCT+TGG | + | chr5.1:27856021-27856040 | MS.gene49664:intron | 20.0% |
!!! | GAGGTTAATTTGATTTATTT+AGG | + | chr5.1:27854916-27854935 | MS.gene49664:intron | 20.0% |
!!! | GGATATACATATCATTTTAT+GGG | + | chr5.1:27856115-27856134 | MS.gene49664:intron | 20.0% |
!!! | GTCTTTTTTATTACTCTTTT+AGG | + | chr5.1:27858375-27858394 | MS.gene49664:intron | 20.0% |
!!! | GTTACTGTAATATATTTTGA+GGG | + | chr5.1:27856508-27856527 | MS.gene49664:intron | 20.0% |
!!! | TAATTGCTTCTTTTATATGT+TGG | + | chr5.1:27855386-27855405 | MS.gene49664:intron | 20.0% |
!!! | TCTAAAATCAAACATATGAT+TGG | - | chr5.1:27855701-27855720 | None:intergenic | 20.0% |
!!! | TGATACTAAGAACATTTTTA+TGG | + | chr5.1:27857761-27857780 | MS.gene49664:intron | 20.0% |
!!! | TGGATATACATATCATTTTA+TGG | + | chr5.1:27856114-27856133 | MS.gene49664:intron | 20.0% |
!!! | TGTTACTGTAATATATTTTG+AGG | + | chr5.1:27856507-27856526 | MS.gene49664:intron | 20.0% |
!!! | TTATGATGTTTTCTGAAAAA+TGG | + | chr5.1:27855433-27855452 | MS.gene49664:intron | 20.0% |
!!! | TTCATGTATGATAGAATTTT+TGG | + | chr5.1:27856083-27856102 | MS.gene49664:intron | 20.0% |
!!! | TTTATTTAGGGTTTGATTAT+TGG | + | chr5.1:27854929-27854948 | MS.gene49664:intron | 20.0% |
! | AATTAGATTATTTGCATCTG+TGG | + | chr5.1:27856652-27856671 | MS.gene49664:intron | 25.0% |
! | ACAATTCTCCTTTAAACAAA+TGG | - | chr5.1:27855993-27856012 | None:intergenic | 25.0% |
! | AGATAGAATTACAATTCTCA+GGG | + | chr5.1:27856780-27856799 | MS.gene49664:CDS | 25.0% |
! | AGCTGAATTAGATGTATATA+GGG | + | chr5.1:27855021-27855040 | MS.gene49664:intron | 25.0% |
! | ATGAATCAATCTAAGTGTTA+CGG | - | chr5.1:27858321-27858340 | None:intergenic | 25.0% |
! | ATTAGATTATTTGCATCTGT+GGG | + | chr5.1:27856653-27856672 | MS.gene49664:intron | 25.0% |
! | CAGAAAATCTGCAATAAAAA+AGG | - | chr5.1:27857613-27857632 | None:intergenic | 25.0% |
! | CCTCAAGAAAACAAAAAATT+AGG | - | chr5.1:27854900-27854919 | None:intergenic | 25.0% |
! | CTACAATTTCCTAATAATTC+TGG | + | chr5.1:27856681-27856700 | MS.gene49664:intron | 25.0% |
! | CTTGCTTAAAGTTTAAGAAT+AGG | + | chr5.1:27856918-27856937 | MS.gene49664:intron | 25.0% |
! | GAATTATTAGGAAATTGTAG+TGG | - | chr5.1:27856681-27856700 | None:intergenic | 25.0% |
! | GGATACTAATTATCTCTTTA+TGG | + | chr5.1:27854832-27854851 | MS.gene49664:CDS | 25.0% |
! | GTTGTATTTGTTTGACTAAT+TGG | + | chr5.1:27855475-27855494 | MS.gene49664:intron | 25.0% |
! | TAAAACACAAACACAATGAA+TGG | - | chr5.1:27856969-27856988 | None:intergenic | 25.0% |
! | TAAGTTTGAGCTCAAAAAAT+TGG | + | chr5.1:27856211-27856230 | MS.gene49664:intron | 25.0% |
! | TATATCTTTCTCAGTATTCT+GGG | + | chr5.1:27857102-27857121 | MS.gene49664:intron | 25.0% |
! | TTGTTCTTGAGATGAATTAT+TGG | + | chr5.1:27855184-27855203 | MS.gene49664:intron | 25.0% |
!! | ACTTAGATTGATTCATTTCA+AGG | + | chr5.1:27858325-27858344 | MS.gene49664:intron | 25.0% |
!! | AGGTGAATTTTATGCATATA+AGG | + | chr5.1:27855137-27855156 | MS.gene49664:intron | 25.0% |
!! | CTTGTATAAGAGGATTTTAT+AGG | + | chr5.1:27856335-27856354 | MS.gene49664:intron | 25.0% |
!! | TGTATTTGAGTCTATTTTGT+TGG | + | chr5.1:27855215-27855234 | MS.gene49664:intron | 25.0% |
!!! | AGTGTTTTAGTGAGTTTTTA+AGG | + | chr5.1:27857138-27857157 | MS.gene49664:intron | 25.0% |
!!! | ATAAAAAAGGTGTTAGACAA+TGG | - | chr5.1:27857600-27857619 | None:intergenic | 25.0% |
!!! | ATTTGTTTTCTTACCATTTC+AGG | + | chr5.1:27857420-27857439 | MS.gene49664:intron | 25.0% |
!!! | CCTAATTTTTTGTTTTCTTG+AGG | + | chr5.1:27854897-27854916 | MS.gene49664:intron | 25.0% |
!!! | GTATGATAGAATTTTTGGTT+TGG | + | chr5.1:27856088-27856107 | MS.gene49664:intron | 25.0% |
!!! | GTTTGATTATTGGTTTTATG+AGG | + | chr5.1:27854939-27854958 | MS.gene49664:intron | 25.0% |
!!! | TAGAATTTTTGGTTTGGAAT+TGG | + | chr5.1:27856094-27856113 | MS.gene49664:intron | 25.0% |
!!! | TCAAAGTGTCTATATTTTGA+CGG | + | chr5.1:27856395-27856414 | MS.gene49664:intron | 25.0% |
!!! | TGTATATAGGGTTTGATTTT+TGG | + | chr5.1:27855033-27855052 | MS.gene49664:intron | 25.0% |
!!! | TTATATGTTGGAGTCTTTTT+TGG | + | chr5.1:27855398-27855417 | MS.gene49664:intron | 25.0% |
!!! | TTTTTGGTTTTGGTATTTCT+TGG | + | chr5.1:27855049-27855068 | MS.gene49664:intron | 25.0% |
AACACAATGAATGGAGTAAT+TGG | - | chr5.1:27856960-27856979 | None:intergenic | 30.0% | |
AACCAAGATCTGAAAAAATG+AGG | - | chr5.1:27855959-27855978 | None:intergenic | 30.0% | |
ACTTTGCATACCATACTTTA+GGG | - | chr5.1:27857818-27857837 | None:intergenic | 30.0% | |
AGGTGAATTTGATGCATATA+GGG | + | chr5.1:27855078-27855097 | MS.gene49664:intron | 30.0% | |
CATAAATTTATGCAGATCGT+GGG | + | chr5.1:27856704-27856723 | MS.gene49664:intron | 30.0% | |
CTATATCTTTCTCAGTATTC+TGG | + | chr5.1:27857101-27857120 | MS.gene49664:intron | 30.0% | |
CTTAACAACTTCAATATCTG+AGG | + | chr5.1:27856543-27856562 | MS.gene49664:intron | 30.0% | |
CTTACACTTGAGTAATTTGA+CGG | - | chr5.1:27856819-27856838 | None:intergenic | 30.0% | |
GAACTTGAAACTTGTATAAG+AGG | + | chr5.1:27856325-27856344 | MS.gene49664:intron | 30.0% | |
GAACTTTACATTGAGATAGA+TGG | - | chr5.1:27857012-27857031 | None:intergenic | 30.0% | |
GAGATAGAATTACAATTCTC+AGG | + | chr5.1:27856779-27856798 | MS.gene49664:CDS | 30.0% | |
GAGCTGAATTAGATGTATAT+AGG | + | chr5.1:27855020-27855039 | MS.gene49664:intron | 30.0% | |
GATAGAATTACAATTCTCAG+GGG | + | chr5.1:27856781-27856800 | MS.gene49664:CDS | 30.0% | |
GATGAATGCTTGAGAAAATA+TGG | + | chr5.1:27857455-27857474 | MS.gene49664:CDS | 30.0% | |
GGGAAAAAAGATCTTTAACT+TGG | - | chr5.1:27857797-27857816 | None:intergenic | 30.0% | |
TAATCCATATAACACTGTCA+GGG | - | chr5.1:27855797-27855816 | None:intergenic | 30.0% | |
TACAAGTGAAACATCATATC+TGG | + | chr5.1:27857228-27857247 | MS.gene49664:intron | 30.0% | |
TACTTTGCATACCATACTTT+AGG | - | chr5.1:27857819-27857838 | None:intergenic | 30.0% | |
TCTCAATGTAAAGTTCAATG+CGG | + | chr5.1:27857016-27857035 | MS.gene49664:intron | 30.0% | |
TGAATCAATCTAAGTGTTAC+GGG | - | chr5.1:27858320-27858339 | None:intergenic | 30.0% | |
TGCTAGATTCAGATGTAATA+AGG | + | chr5.1:27856570-27856589 | MS.gene49664:intron | 30.0% | |
TGTGCAACACAATTAAGAAA+CGG | + | chr5.1:27856181-27856200 | MS.gene49664:intron | 30.0% | |
TTAATCCATATAACACTGTC+AGG | - | chr5.1:27855798-27855817 | None:intergenic | 30.0% | |
TTGGTATTTCTTGGTTTATG+AGG | + | chr5.1:27855058-27855077 | MS.gene49664:intron | 30.0% | |
TTTACATTGAGATAGATGGA+TGG | - | chr5.1:27857008-27857027 | None:intergenic | 30.0% | |
! | ATGATCTGATTGAGCTTTTT+CGG | + | chr5.1:27854792-27854811 | MS.gene49664:CDS | 30.0% |
! | GAGGTTTGTGTGTTATTAAA+TGG | + | chr5.1:27857700-27857719 | MS.gene49664:intron | 30.0% |
! | GATTGCAAAAAATCAAGTTG+CGG | - | chr5.1:27857059-27857078 | None:intergenic | 30.0% |
! | GTTGTCTGCATTTTTCTTTT+TGG | + | chr5.1:27857925-27857944 | MS.gene49664:intron | 30.0% |
!! | CTGTAATATATTTTGAGGGA+AGG | + | chr5.1:27856512-27856531 | MS.gene49664:intron | 30.0% |
!! | GTTATGTGCCATTTGTTTAA+AGG | + | chr5.1:27855982-27856001 | MS.gene49664:intron | 30.0% |
!! | TTTTCGGTTTTGGTGATTTT+TGG | + | chr5.1:27854991-27855010 | MS.gene49664:intron | 30.0% |
!! | TTTTCTTACCATTTCAGGTA+TGG | + | chr5.1:27857425-27857444 | MS.gene49664:intron | 30.0% |
!!! | ATCCTCATTTTTTCAGATCT+TGG | + | chr5.1:27855954-27855973 | MS.gene49664:intron | 30.0% |
!!! | ATCTTTTTTCCCCTAAAGTA+TGG | + | chr5.1:27857805-27857824 | MS.gene49664:intron | 30.0% |
!!! | ATGTTTTAAGTTTGTGTGAG+TGG | + | chr5.1:27856272-27856291 | MS.gene49664:intron | 30.0% |
!!! | TAGGGTTTGATTTTTGGTTT+TGG | + | chr5.1:27855039-27855058 | MS.gene49664:intron | 30.0% |
!!! | TAGTGTTTTGTTTTCGGTTT+TGG | + | chr5.1:27854981-27855000 | MS.gene49664:intron | 30.0% |
!!! | TGGAAATTGCTGTTTTTAGT+TGG | + | chr5.1:27855453-27855472 | MS.gene49664:intron | 30.0% |
AATAACAGATTGGCATTCAC+AGG | - | chr5.1:27857312-27857331 | None:intergenic | 35.0% | |
AATATGGAAATGCCAATGTC+TGG | + | chr5.1:27857471-27857490 | MS.gene49664:CDS | 35.0% | |
AATCATTCCAACAGAAAAGC+AGG | - | chr5.1:27856053-27856072 | None:intergenic | 35.0% | |
AGAAAGAGTTGTAAAGTGTG+TGG | + | chr5.1:27857167-27857186 | MS.gene49664:intron | 35.0% | |
AGAATGGTTATAGCCAAAGT+TGG | - | chr5.1:27856598-27856617 | None:intergenic | 35.0% | |
AGTGACATGTGTTTGTATTG+AGG | + | chr5.1:27856471-27856490 | MS.gene49664:intron | 35.0% | |
ATCCCAAACCAATAACAGAT+TGG | - | chr5.1:27857322-27857341 | None:intergenic | 35.0% | |
ATTCTCTCCAATTTCCAGAA+TGG | - | chr5.1:27858464-27858483 | None:intergenic | 35.0% | |
CTCAATGTAAAGTTCAATGC+GGG | + | chr5.1:27857017-27857036 | MS.gene49664:intron | 35.0% | |
CTCTTTATGGGAGATTATGT+AGG | + | chr5.1:27854845-27854864 | MS.gene49664:CDS | 35.0% | |
CTTTGCATACCATACTTTAG+GGG | - | chr5.1:27857817-27857836 | None:intergenic | 35.0% | |
GAAACATGAAACATCCAAAG+AGG | - | chr5.1:27857999-27858018 | None:intergenic | 35.0% | |
GAAATGGTCAAGATTTAGTC+AGG | - | chr5.1:27855881-27855900 | None:intergenic | 35.0% | |
GAGGTGAATTTGATGCATAT+AGG | + | chr5.1:27855077-27855096 | MS.gene49664:intron | 35.0% | |
GCATAAATTTATGCAGATCG+TGG | + | chr5.1:27856703-27856722 | MS.gene49664:intron | 35.0% | |
GGTAAAGAATTTCCAGACAT+TGG | - | chr5.1:27857486-27857505 | None:intergenic | 35.0% | |
GTGCAACACAATTAAGAAAC+GGG | + | chr5.1:27856182-27856201 | MS.gene49664:intron | 35.0% | |
TAACACAATACGGACAGAAA+TGG | - | chr5.1:27855897-27855916 | None:intergenic | 35.0% | |
TACACAATAGCACATTCACT+CGG | - | chr5.1:27857267-27857286 | None:intergenic | 35.0% | |
TCAATGTAAAGTTCAATGCG+GGG | + | chr5.1:27857018-27857037 | MS.gene49664:intron | 35.0% | |
TCTGGAAATTGGAGAGAATA+TGG | + | chr5.1:27858465-27858484 | MS.gene49664:CDS | 35.0% | |
TGATATGTAGTCAGCTAGTT+TGG | + | chr5.1:27855577-27855596 | MS.gene49664:intron | 35.0% | |
TGCAACACAATTAAGAAACG+GGG | + | chr5.1:27856183-27856202 | MS.gene49664:intron | 35.0% | |
TGTGAATGCCAATCTGTTAT+TGG | + | chr5.1:27857311-27857330 | MS.gene49664:intron | 35.0% | |
TTATCCAGTGTATCCAAAGA+TGG | - | chr5.1:27857655-27857674 | None:intergenic | 35.0% | |
TTCTTAATTGTGTTGCACAC+CGG | - | chr5.1:27856180-27856199 | None:intergenic | 35.0% | |
TTTACCCTGACAGTGTTATA+TGG | + | chr5.1:27855790-27855809 | MS.gene49664:intron | 35.0% | |
! | ATGCCAATCTGTTATTGGTT+TGG | + | chr5.1:27857316-27857335 | MS.gene49664:intron | 35.0% |
! | ATGTAATAAGGTGCCAACTT+TGG | + | chr5.1:27856582-27856601 | MS.gene49664:intron | 35.0% |
! | GGTTTGGGATGATATGAAAT+TGG | + | chr5.1:27857332-27857351 | MS.gene49664:intron | 35.0% |
! | TGCATATAGGGTGTGATTTT+TGG | + | chr5.1:27855090-27855109 | MS.gene49664:intron | 35.0% |
! | TGTGTTTTACAACTTTCTGC+TGG | + | chr5.1:27856980-27856999 | MS.gene49664:intron | 35.0% |
! | TTGCAGATTTTCTGTTTGCA+TGG | + | chr5.1:27857619-27857638 | MS.gene49664:intron | 35.0% |
! | TTGTGATGGAAGGATACAAT+TGG | + | chr5.1:27858280-27858299 | MS.gene49664:CDS | 35.0% |
!! | AATGGATAGTGGTTTTACCA+AGG | + | chr5.1:27857192-27857211 | MS.gene49664:intron | 35.0% |
!! | ACTCTTTTAGGAGAAGAATG+TGG | + | chr5.1:27858387-27858406 | MS.gene49664:intron | 35.0% |
!! | ATGGATAGTGGTTTTACCAA+GGG | + | chr5.1:27857193-27857212 | MS.gene49664:intron | 35.0% |
!! | TATTTTGAGGGAAGGTTATG+AGG | + | chr5.1:27856520-27856539 | MS.gene49664:intron | 35.0% |
!! | TGCCAATCTGTTATTGGTTT+GGG | + | chr5.1:27857317-27857336 | MS.gene49664:intron | 35.0% |
!! | TGGTGATGTTTGCTTTTATG+AGG | + | chr5.1:27855117-27855136 | MS.gene49664:intron | 35.0% |
!!! | GTTGGAGTCTTTTTTGGAAA+GGG | + | chr5.1:27855404-27855423 | MS.gene49664:intron | 35.0% |
!!! | GTTGGTTTTTGATGAGTGTT+TGG | + | chr5.1:27855233-27855252 | MS.gene49664:intron | 35.0% |
!!! | TGTTGGAGTCTTTTTTGGAA+AGG | + | chr5.1:27855403-27855422 | MS.gene49664:intron | 35.0% |
!!! | TTGGTGTTGTGTTCGAATTT+TGG | + | chr5.1:27855325-27855344 | MS.gene49664:intron | 35.0% |
AATGTAAAGTTCAATGCGGG+GGG | + | chr5.1:27857020-27857039 | MS.gene49664:intron | 40.0% | |
ACGGTTTGTGGTGATATTCA+TGG | + | chr5.1:27854761-27854780 | MS.gene49664:CDS | 40.0% | |
ATATCACCACAAACCGTAAC+CGG | - | chr5.1:27854758-27854777 | None:intergenic | 40.0% | |
ATTCCAACAGAAAAGCAGGA+GGG | - | chr5.1:27856049-27856068 | None:intergenic | 40.0% | |
CAAATTACTGCTACCGATGT+GGG | + | chr5.1:27858428-27858447 | MS.gene49664:CDS | 40.0% | |
CAATGTAAAGTTCAATGCGG+GGG | + | chr5.1:27857019-27857038 | MS.gene49664:intron | 40.0% | |
CCAGTAAGCGAATCAAAGAA+TGG | - | chr5.1:27856614-27856633 | None:intergenic | 40.0% | |
CGTAGAAACCATACCTGAAA+TGG | - | chr5.1:27857436-27857455 | None:intergenic | 40.0% | |
GCTCAGTTCAATCACACAAA+TGG | + | chr5.1:27858228-27858247 | MS.gene49664:CDS | 40.0% | |
GTTGTAAAGTGTGTGGTGAA+TGG | + | chr5.1:27857174-27857193 | MS.gene49664:intron | 40.0% | |
TCAAACCTGACTCTCAATGA+GGG | - | chr5.1:27857537-27857556 | None:intergenic | 40.0% | |
TCAATATAGGTTCCGCATGA+AGG | + | chr5.1:27858108-27858127 | MS.gene49664:intron | 40.0% | |
TTCAAACCTGACTCTCAATG+AGG | - | chr5.1:27857538-27857557 | None:intergenic | 40.0% | |
TTGTGTAGACGTGAATTACG+TGG | + | chr5.1:27857280-27857299 | MS.gene49664:intron | 40.0% | |
! | AACCTCTACGACATGGTTTT+AGG | - | chr5.1:27858050-27858069 | None:intergenic | 40.0% |
! | AAGCAAAATTGTCACTTGCC+AGG | - | chr5.1:27858087-27858106 | None:intergenic | 40.0% |
! | AGTGGAGACTGTTTCACTTT+TGG | + | chr5.1:27856735-27856754 | MS.gene49664:CDS | 40.0% |
! | CAGATTTTCTGTTTGCATGG+AGG | + | chr5.1:27857622-27857641 | MS.gene49664:intron | 40.0% |
! | CCATTCTTTGATTCGCTTAC+TGG | + | chr5.1:27856611-27856630 | MS.gene49664:intron | 40.0% |
!!! | AGGGTGTGATTTTTGGTTCT+TGG | + | chr5.1:27855097-27855116 | MS.gene49664:intron | 40.0% |
!!! | ATTGAGCTTTTTCGGATTGG+TGG | + | chr5.1:27854800-27854819 | MS.gene49664:CDS | 40.0% |
!!! | CTGATTGAGCTTTTTCGGAT+TGG | + | chr5.1:27854797-27854816 | MS.gene49664:CDS | 40.0% |
AGATCGTGGGTACTATTCAG+TGG | + | chr5.1:27856717-27856736 | MS.gene49664:intron | 45.0% | |
AGTGTGTGGTGAATGGATAG+TGG | + | chr5.1:27857181-27857200 | MS.gene49664:intron | 45.0% | |
AGTTACTATCACACCGTAGG+GGG | + | chr5.1:27856143-27856162 | MS.gene49664:intron | 45.0% | |
ATGTAAAGTTCAATGCGGGG+GGG | + | chr5.1:27857021-27857040 | MS.gene49664:intron | 45.0% | |
CAGTATTCTGGGTGATGTTC+TGG | + | chr5.1:27857113-27857132 | MS.gene49664:intron | 45.0% | |
CAGTTACTATCACACCGTAG+GGG | + | chr5.1:27856142-27856161 | MS.gene49664:intron | 45.0% | |
CATTCCAACAGAAAAGCAGG+AGG | - | chr5.1:27856050-27856069 | None:intergenic | 45.0% | |
CCAAATTACTGCTACCGATG+TGG | + | chr5.1:27858427-27858446 | MS.gene49664:CDS | 45.0% | |
CCACATCGGTAGCAGTAATT+TGG | - | chr5.1:27858430-27858449 | None:intergenic | 45.0% | |
CCATGTGCTTTATGCCTCTT+TGG | + | chr5.1:27857982-27858001 | MS.gene49664:intron | 45.0% | |
CTCACCATCTTTGGATACAC+TGG | + | chr5.1:27857648-27857667 | MS.gene49664:CDS | 45.0% | |
GACCAATGTGTGATCTCTTG+TGG | + | chr5.1:27858130-27858149 | MS.gene49664:CDS | 45.0% | |
GACCACAAGAGATCACACAT+TGG | - | chr5.1:27858135-27858154 | None:intergenic | 45.0% | |
GAGGCATAAAGCACATGGTA+AGG | - | chr5.1:27857980-27857999 | None:intergenic | 45.0% | |
GCAGTTACTATCACACCGTA+GGG | + | chr5.1:27856141-27856160 | MS.gene49664:intron | 45.0% | |
GGTTGACTGGATATATTGCC+TGG | + | chr5.1:27858066-27858085 | MS.gene49664:intron | 45.0% | |
TAGAGCTCATCAGCTTGTGA+TGG | + | chr5.1:27858266-27858285 | MS.gene49664:CDS | 45.0% | |
TCACACATTGGTCCTTCATG+CGG | - | chr5.1:27858123-27858142 | None:intergenic | 45.0% | |
TGACACTACACGAAAGACAC+CGG | + | chr5.1:27858534-27858553 | MS.gene49664:CDS | 45.0% | |
TGAGGAATGGAACGTTCAAC+CGG | + | chr5.1:27854724-27854743 | MS.gene49664:CDS | 45.0% | |
TGCAGTTACTATCACACCGT+AGG | + | chr5.1:27856140-27856159 | MS.gene49664:intron | 45.0% | |
TGCCTAAAACCATGTCGTAG+AGG | + | chr5.1:27858045-27858064 | MS.gene49664:intron | 45.0% | |
TGCTGGATATACGTTTGGAC+AGG | + | chr5.1:27858197-27858216 | MS.gene49664:CDS | 45.0% | |
TGTTTCACTTGTACGCTCCA+TGG | - | chr5.1:27857221-27857240 | None:intergenic | 45.0% | |
TTCCAACAGAAAAGCAGGAG+GGG | - | chr5.1:27856048-27856067 | None:intergenic | 45.0% | |
! | ATGGCTGCCATTCTGGAAAT+TGG | + | chr5.1:27858454-27858473 | MS.gene49664:CDS | 45.0% |
! | CCAAAGAGGCATAAAGCACA+TGG | - | chr5.1:27857985-27858004 | None:intergenic | 45.0% |
!! | GGAGACTGTTTCACTTTTGG+TGG | + | chr5.1:27856738-27856757 | MS.gene49664:CDS | 45.0% |
AACCTCCTGTATGCGATCCA+AGG | - | chr5.1:27857686-27857705 | None:intergenic | 50.0% | |
AACGTATATCCAGCACCACG+TGG | - | chr5.1:27858192-27858211 | None:intergenic | 50.0% | |
AAGTGTCCGGTTACGGTTTG+TGG | + | chr5.1:27854749-27854768 | MS.gene49664:CDS | 50.0% | |
ACCATGTCGTAGAGGTTGAC+TGG | + | chr5.1:27858053-27858072 | MS.gene49664:intron | 50.0% | |
ACTGGATAATATCCGCGCCT+TGG | + | chr5.1:27857666-27857685 | MS.gene49664:CDS | 50.0% | |
CATGGAGTGCAAGCCTTTAC+CGG | + | chr5.1:27854655-27854674 | MS.gene49664:CDS | 50.0% | |
CTGCTACCGATGTGGGAATA+TGG | + | chr5.1:27858435-27858454 | MS.gene49664:CDS | 50.0% | |
GGGCGATTCTTGTTGAGGAA+TGG | + | chr5.1:27854711-27854730 | MS.gene49664:CDS | 50.0% | |
GGTGTCTTTCGTGTAGTGTC+AGG | - | chr5.1:27858535-27858554 | None:intergenic | 50.0% | |
GTGTCAGGCTCAATTTGCCT+TGG | - | chr5.1:27858520-27858539 | None:intergenic | 50.0% | |
TATCACACCGTAGGGGGTTA+GGG | + | chr5.1:27856149-27856168 | MS.gene49664:intron | 50.0% | |
TCCAACAGAAAAGCAGGAGG+GGG | - | chr5.1:27856047-27856066 | None:intergenic | 50.0% | |
TCCAGTCAACCTCTACGACA+TGG | - | chr5.1:27858057-27858076 | None:intergenic | 50.0% | |
TGCAGTTTGATCCAGCTCCA+AGG | + | chr5.1:27858500-27858519 | MS.gene49664:CDS | 50.0% | |
TGGAGGTCTCTCACCATCTT+TGG | + | chr5.1:27857639-27857658 | MS.gene49664:CDS | 50.0% | |
TGGCAGCCATATTCCCACAT+CGG | - | chr5.1:27858444-27858463 | None:intergenic | 50.0% | |
TGGGAATATGGCTGCCATTC+TGG | + | chr5.1:27858447-27858466 | MS.gene49664:CDS | 50.0% | |
! | CGTGGTGCTGGATATACGTT+TGG | + | chr5.1:27858192-27858211 | MS.gene49664:CDS | 50.0% |
! | GCTCATCAGCTTGTGATGGA+AGG | + | chr5.1:27858270-27858289 | MS.gene49664:CDS | 50.0% |
! | GGAAGGATACAATTGGTGCC+AGG | + | chr5.1:27858287-27858306 | MS.gene49664:CDS | 50.0% |
!! | TCGGATTGGTGGAAATGCTC+CGG | + | chr5.1:27854811-27854830 | MS.gene49664:CDS | 50.0% |
!!! | TGGTTTTACCAAGGGCACCA+TGG | + | chr5.1:27857201-27857220 | MS.gene49664:intron | 50.0% |
AAGTTCAATGCGGGGGGGTT+CGG | + | chr5.1:27857026-27857045 | MS.gene49664:intron | 55.0% | |
ACCCAGACGATCGTTGTGGT+TGG | + | chr5.1:27858157-27858176 | MS.gene49664:CDS | 55.0% | |
ACCGTAACCGGACACTTCAC+CGG | - | chr5.1:27854746-27854765 | None:intergenic | 55.0% | |
AGCGAGGGCGATTCTTGTTG+AGG | + | chr5.1:27854706-27854725 | MS.gene49664:CDS | 55.0% | |
AGTGTTACGGGTCAGTCACC+TGG | - | chr5.1:27858308-27858327 | None:intergenic | 55.0% | |
CCAGACGATCGTTGTGGTTG+GGG | + | chr5.1:27858159-27858178 | MS.gene49664:CDS | 55.0% | |
CCCAACCACAACGATCGTCT+GGG | - | chr5.1:27858161-27858180 | None:intergenic | 55.0% | |
CCCAGACGATCGTTGTGGTT+GGG | + | chr5.1:27858158-27858177 | MS.gene49664:CDS | 55.0% | |
CTATCACACCGTAGGGGGTT+AGG | + | chr5.1:27856148-27856167 | MS.gene49664:intron | 55.0% | |
CTCTCAATGAGGGCAGTCAG+AGG | - | chr5.1:27857527-27857546 | None:intergenic | 55.0% | |
GACTGCCCTCATTGAGAGTC+AGG | + | chr5.1:27857529-27857548 | MS.gene49664:CDS | 55.0% | |
GGCTCAATTTGCCTTGGAGC+TGG | - | chr5.1:27858514-27858533 | None:intergenic | 55.0% | |
GGTATATCTCCACGTGGTGC+TGG | + | chr5.1:27858180-27858199 | MS.gene49664:CDS | 55.0% | |
GGTTGGGGTATATCTCCACG+TGG | + | chr5.1:27858174-27858193 | MS.gene49664:CDS | 55.0% | |
TCGGCAGATCGAGAGTCTCA+TGG | + | chr5.1:27854637-27854656 | MS.gene49664:CDS | 55.0% | |
TCTGACCCAGACGATCGTTG+TGG | + | chr5.1:27858153-27858172 | MS.gene49664:CDS | 55.0% | |
TTCACATCCGCCTCCGGTAA+AGG | - | chr5.1:27854671-27854690 | None:intergenic | 55.0% | |
TTTACCGGAGGCGGATGTGA+AGG | + | chr5.1:27854670-27854689 | MS.gene49664:CDS | 55.0% | |
! | ACCGGTGAAGTGTCCGGTTA+CGG | + | chr5.1:27854742-27854761 | MS.gene49664:CDS | 55.0% |
! | CGTTCAACCGGTGAAGTGTC+CGG | + | chr5.1:27854736-27854755 | MS.gene49664:CDS | 55.0% |
AGGCGCTATGCGATCAAGCG+AGG | + | chr5.1:27854690-27854709 | MS.gene49664:CDS | 60.0% | |
CCCCAACCACAACGATCGTC+TGG | - | chr5.1:27858162-27858181 | None:intergenic | 60.0% | |
CCTGTATGCGATCCAAGGCG+CGG | - | chr5.1:27857681-27857700 | None:intergenic | 60.0% | |
CGATCCAGATCCGCGTGTGA+CGG | - | chr5.1:27854620-27854639 | None:intergenic | 60.0% | |
CGCCTTGGATCGCATACAGG+AGG | + | chr5.1:27857681-27857700 | MS.gene49664:CDS | 60.0% | |
CGTCACACGCGGATCTGGAT+CGG | + | chr5.1:27854618-27854637 | MS.gene49664:CDS | 60.0% | |
GGAGTGCAAGCCTTTACCGG+AGG | + | chr5.1:27854658-27854677 | MS.gene49664:CDS | 60.0% | |
GGCGCTATGCGATCAAGCGA+GGG | + | chr5.1:27854691-27854710 | MS.gene49664:CDS | 60.0% | |
GTGCAAGCCTTTACCGGAGG+CGG | + | chr5.1:27854661-27854680 | MS.gene49664:CDS | 60.0% | |
TGTACGCTCCATGGTGCCCT+TGG | - | chr5.1:27857212-27857231 | None:intergenic | 60.0% | |
!! | GCCCCCTCCTGCTTTTCTGT+TGG | + | chr5.1:27856043-27856062 | MS.gene49664:intron | 60.0% |
AGCGCCTTCACATCCGCCTC+CGG | - | chr5.1:27854677-27854696 | None:intergenic | 65.0% | |
CACACCGTAGGGGGTTAGGG+TGG | + | chr5.1:27856152-27856171 | MS.gene49664:intron | 65.0% | |
CCGCGCCTTGGATCGCATAC+AGG | + | chr5.1:27857678-27857697 | MS.gene49664:CDS | 65.0% | |
GGCACCACCCTAACCCCCTA+CGG | - | chr5.1:27856159-27856178 | None:intergenic | 65.0% | |
GTAGGGGGTTAGGGTGGTGC+CGG | + | chr5.1:27856158-27856177 | MS.gene49664:intron | 65.0% | |
! | CAATGCGGGGGGGTTCGGTT+AGG | + | chr5.1:27857031-27857050 | MS.gene49664:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 27854614 | 27858570 | 27854614 | ID=MS.gene49664 |
chr5.1 | mRNA | 27854614 | 27858570 | 27854614 | ID=MS.gene49664.t1;Parent=MS.gene49664 |
chr5.1 | exon | 27854614 | 27854866 | 27854614 | ID=MS.gene49664.t1.exon1;Parent=MS.gene49664.t1 |
chr5.1 | CDS | 27854614 | 27854866 | 27854614 | ID=cds.MS.gene49664.t1;Parent=MS.gene49664.t1 |
chr5.1 | exon | 27856719 | 27856833 | 27856719 | ID=MS.gene49664.t1.exon2;Parent=MS.gene49664.t1 |
chr5.1 | CDS | 27856719 | 27856833 | 27856719 | ID=cds.MS.gene49664.t1;Parent=MS.gene49664.t1 |
chr5.1 | exon | 27857442 | 27857550 | 27857442 | ID=MS.gene49664.t1.exon3;Parent=MS.gene49664.t1 |
chr5.1 | CDS | 27857442 | 27857550 | 27857442 | ID=cds.MS.gene49664.t1;Parent=MS.gene49664.t1 |
chr5.1 | exon | 27857625 | 27857702 | 27857625 | ID=MS.gene49664.t1.exon4;Parent=MS.gene49664.t1 |
chr5.1 | CDS | 27857625 | 27857702 | 27857625 | ID=cds.MS.gene49664.t1;Parent=MS.gene49664.t1 |
chr5.1 | exon | 27858117 | 27858308 | 27858117 | ID=MS.gene49664.t1.exon5;Parent=MS.gene49664.t1 |
chr5.1 | CDS | 27858117 | 27858308 | 27858117 | ID=cds.MS.gene49664.t1;Parent=MS.gene49664.t1 |
chr5.1 | exon | 27858397 | 27858570 | 27858397 | ID=MS.gene49664.t1.exon6;Parent=MS.gene49664.t1 |
chr5.1 | CDS | 27858397 | 27858570 | 27858397 | ID=cds.MS.gene49664.t1;Parent=MS.gene49664.t1 |
Gene Sequence |
Protein sequence |