Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051852.t1 | XP_013458468.1 | 68.2 | 129 | 32 | 3 | 1 | 126 | 1 | 123 | 5.80E-34 | 153.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051852.t1 | I3SBP3 | 68.2 | 129 | 32 | 3 | 1 | 126 | 1 | 123 | 4.2e-34 | 153.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene051852 | 0.802441 | 5.60E-49 | -1.69E-46 |
| MS.gene050359 | MS.gene051852 | 0.820788 | 5.70E-53 | -1.69E-46 |
| MS.gene05035 | MS.gene051852 | 0.800573 | 1.35E-48 | -1.69E-46 |
| MS.gene051184 | MS.gene051852 | 0.80635 | 8.58E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene052307 | 0.833824 | 4.27E-56 | -1.69E-46 |
| MS.gene051852 | MS.gene052463 | 0.816003 | 6.92E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene052533 | 0.812567 | 3.97E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene055469 | 0.808373 | 3.20E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene055864 | 0.808886 | 2.48E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene058159 | 0.804721 | 1.89E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene058758 | 0.804737 | 1.87E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene059170 | 0.844999 | 5.34E-59 | -1.69E-46 |
| MS.gene051852 | MS.gene060932 | 0.822958 | 1.79E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene061100 | 0.817841 | 2.68E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene06133 | 0.802102 | 6.58E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene061707 | 0.815131 | 1.08E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene062255 | 0.805028 | 1.63E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene062770 | 0.817459 | 3.26E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene063149 | 0.805578 | 1.25E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene064243 | 0.853364 | 2.51E-61 | -1.69E-46 |
| MS.gene051852 | MS.gene065159 | 0.81596 | 7.07E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene065593 | 0.83373 | 4.51E-56 | -1.69E-46 |
| MS.gene051852 | MS.gene066047 | 0.803835 | 2.88E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene066127 | -0.809887 | 1.52E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene066405 | 0.814045 | 1.88E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene066683 | 0.804859 | 1.76E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene066897 | 0.848713 | 5.14E-60 | -1.69E-46 |
| MS.gene051852 | MS.gene067043 | 0.821858 | 3.23E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene067814 | 0.814574 | 1.44E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene069084 | 0.802391 | 5.74E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene06949 | 0.825116 | 5.59E-54 | -1.69E-46 |
| MS.gene051852 | MS.gene06998 | 0.808263 | 3.38E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene071779 | 0.802524 | 5.38E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene072116 | 0.832672 | 8.27E-56 | -1.69E-46 |
| MS.gene051852 | MS.gene072762 | 0.806204 | 9.21E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene072887 | 0.810619 | 1.05E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene073132 | 0.806547 | 7.80E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene073258 | 0.815422 | 9.32E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene07382 | 0.805031 | 1.62E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene074381 | 0.802518 | 5.40E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene07878 | 0.835727 | 1.42E-56 | -1.69E-46 |
| MS.gene051852 | MS.gene08201 | 0.816512 | 5.32E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene08325 | 0.818427 | 1.97E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene08336 | 0.832182 | 1.09E-55 | -1.69E-46 |
| MS.gene051852 | MS.gene08627 | 0.813224 | 2.85E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene08793 | 0.818057 | 2.39E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene08922 | 0.821999 | 2.99E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene09297 | 0.815776 | 7.77E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene09656 | 0.844058 | 9.56E-59 | -1.69E-46 |
| MS.gene051852 | MS.gene20077 | 0.811919 | 5.50E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene20457 | 0.807542 | 4.80E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene21056 | 0.80633 | 8.67E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene21470 | 0.813682 | 2.26E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene21826 | 0.824335 | 8.53E-54 | -1.69E-46 |
| MS.gene051852 | MS.gene22288 | 0.814394 | 1.58E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene23078 | 0.835827 | 1.34E-56 | -1.69E-46 |
| MS.gene051852 | MS.gene23935 | 0.808226 | 3.44E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene24076 | 0.80701 | 6.23E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene24806 | 0.828064 | 1.11E-54 | -1.69E-46 |
| MS.gene051852 | MS.gene25217 | 0.806685 | 7.29E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene25220 | 0.804927 | 1.71E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene25244 | 0.826183 | 3.12E-54 | -1.69E-46 |
| MS.gene051852 | MS.gene25469 | 0.807918 | 4.00E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene25471 | 0.810149 | 1.33E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene25928 | 0.82538 | 4.84E-54 | -1.69E-46 |
| MS.gene051852 | MS.gene25981 | -0.809046 | 2.30E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene26396 | 0.809603 | 1.74E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene28820 | 0.807983 | 3.87E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene29036 | 0.814643 | 1.39E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene29096 | 0.816765 | 4.67E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene29233 | 0.803862 | 2.85E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene29355 | 0.812918 | 3.33E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene30423 | 0.813037 | 3.13E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene30727 | 0.800859 | 1.18E-48 | -1.69E-46 |
| MS.gene051852 | MS.gene31648 | 0.839768 | 1.30E-57 | -1.69E-46 |
| MS.gene051852 | MS.gene32636 | 0.825354 | 4.91E-54 | -1.69E-46 |
| MS.gene051852 | MS.gene32681 | 0.818099 | 2.34E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene32688 | 0.836385 | 9.65E-57 | -1.69E-46 |
| MS.gene051852 | MS.gene33135 | 0.818783 | 1.64E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene33177 | 0.819286 | 1.26E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene33180 | 0.818142 | 2.29E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene34453 | 0.852623 | 4.09E-61 | -1.69E-46 |
| MS.gene051852 | MS.gene34691 | 0.819737 | 9.93E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene34937 | 0.822497 | 2.30E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene34950 | 0.832521 | 9.02E-56 | -1.69E-46 |
| MS.gene051852 | MS.gene35114 | 0.813442 | 2.55E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene35323 | 0.800518 | 1.39E-48 | -1.69E-46 |
| MS.gene051852 | MS.gene35800 | 0.805163 | 1.52E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene35934 | 0.818905 | 1.54E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene36081 | 0.839369 | 1.65E-57 | -1.69E-46 |
| MS.gene051852 | MS.gene36289 | 0.817155 | 3.82E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene37007 | 0.80156 | 8.50E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene37011 | 0.822815 | 1.94E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene38145 | 0.807711 | 4.42E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene39046 | 0.819678 | 1.02E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene39143 | 0.816053 | 6.74E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene40087 | 0.813149 | 2.96E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene40093 | 0.832415 | 9.58E-56 | -1.69E-46 |
| MS.gene051852 | MS.gene40220 | 0.809274 | 2.05E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene40330 | 0.800179 | 1.63E-48 | -1.69E-46 |
| MS.gene051852 | MS.gene41427 | 0.812874 | 3.40E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene41733 | 0.817061 | 4.01E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene42128 | 0.812476 | 4.16E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene42653 | 0.836875 | 7.24E-57 | -1.69E-46 |
| MS.gene051852 | MS.gene42783 | 0.838523 | 2.73E-57 | -1.69E-46 |
| MS.gene051852 | MS.gene42982 | 0.816176 | 6.33E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene43324 | 0.824654 | 7.18E-54 | -1.69E-46 |
| MS.gene051852 | MS.gene44326 | 0.805368 | 1.38E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene44427 | 0.819127 | 1.37E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene44631 | 0.827892 | 1.22E-54 | -1.69E-46 |
| MS.gene051852 | MS.gene44967 | 0.812789 | 3.55E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene45281 | 0.871889 | 4.84E-67 | -1.69E-46 |
| MS.gene051852 | MS.gene45414 | 0.81511 | 1.09E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene45624 | 0.832755 | 7.89E-56 | -1.69E-46 |
| MS.gene051852 | MS.gene46048 | 0.822928 | 1.82E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene47004 | 0.803553 | 3.30E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene47006 | 0.816974 | 4.19E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene47581 | 0.808371 | 3.20E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene47747 | 0.807807 | 4.22E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene48283 | 0.830425 | 2.96E-55 | -1.69E-46 |
| MS.gene051852 | MS.gene48526 | 0.800482 | 1.41E-48 | -1.69E-46 |
| MS.gene051852 | MS.gene49047 | 0.854339 | 1.31E-61 | -1.69E-46 |
| MS.gene051852 | MS.gene49467 | 0.858042 | 1.08E-62 | -1.69E-46 |
| MS.gene051852 | MS.gene49733 | 0.803094 | 4.11E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene49818 | 0.845381 | 4.21E-59 | -1.69E-46 |
| MS.gene051852 | MS.gene49883 | 0.81119 | 7.92E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene50053 | 0.81909 | 1.39E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene51384 | 0.865877 | 4.29E-65 | -1.69E-46 |
| MS.gene051852 | MS.gene51789 | 0.807726 | 4.39E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene52610 | 0.811758 | 5.96E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene52956 | 0.820203 | 7.77E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene53552 | 0.83881 | 2.31E-57 | -1.69E-46 |
| MS.gene051852 | MS.gene53825 | 0.814835 | 1.26E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene54220 | 0.816265 | 6.05E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene54280 | 0.806467 | 8.11E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene54548 | 0.841267 | 5.27E-58 | -1.69E-46 |
| MS.gene051852 | MS.gene56163 | 0.807558 | 4.77E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene56476 | 0.806334 | 8.65E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene56510 | 0.81893 | 1.52E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene56565 | 0.828706 | 7.75E-55 | -1.69E-46 |
| MS.gene051852 | MS.gene56742 | 0.825523 | 4.48E-54 | -1.69E-46 |
| MS.gene051852 | MS.gene57360 | 0.814591 | 1.43E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene57576 | 0.800734 | 1.25E-48 | -1.69E-46 |
| MS.gene051852 | MS.gene57980 | 0.805799 | 1.12E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene58093 | 0.83624 | 1.05E-56 | -1.69E-46 |
| MS.gene051852 | MS.gene58134 | 0.820499 | 6.64E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene58579 | 0.810315 | 1.23E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene58627 | 0.81916 | 1.34E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene59086 | 0.806752 | 7.06E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene59241 | 0.846842 | 1.68E-59 | -1.69E-46 |
| MS.gene051852 | MS.gene59242 | 0.84546 | 4.01E-59 | -1.69E-46 |
| MS.gene051852 | MS.gene59366 | 0.812199 | 4.78E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene60144 | 0.815668 | 8.21E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene60163 | 0.822294 | 2.56E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene60302 | 0.815918 | 7.23E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene61462 | 0.822583 | 2.19E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene62423 | 0.826847 | 2.17E-54 | -1.69E-46 |
| MS.gene051852 | MS.gene62461 | 0.805515 | 1.29E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene62924 | 0.803891 | 2.81E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene65300 | 0.805282 | 1.44E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene66928 | 0.800314 | 1.53E-48 | -1.69E-46 |
| MS.gene051852 | MS.gene67067 | 0.821223 | 4.53E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene67107 | 0.810388 | 1.18E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene67553 | 0.807271 | 5.48E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene67881 | 0.821105 | 4.82E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene68204 | 0.814534 | 1.47E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene68797 | 0.816729 | 4.76E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene69097 | 0.825454 | 4.65E-54 | -1.69E-46 |
| MS.gene051852 | MS.gene69692 | 0.812896 | 3.37E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene70154 | 0.800795 | 1.22E-48 | -1.69E-46 |
| MS.gene051852 | MS.gene70175 | 0.805212 | 1.49E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene70238 | 0.830962 | 2.18E-55 | -1.69E-46 |
| MS.gene051852 | MS.gene70282 | 0.803683 | 3.10E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene70600 | 0.821698 | 3.52E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene70839 | 0.811503 | 6.78E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene71810 | 0.800795 | 1.22E-48 | -1.69E-46 |
| MS.gene051852 | MS.gene71994 | 0.800365 | 1.49E-48 | -1.69E-46 |
| MS.gene051852 | MS.gene73245 | 0.835053 | 2.10E-56 | -1.69E-46 |
| MS.gene051852 | MS.gene74537 | 0.807153 | 5.81E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene74606 | 0.824201 | 9.17E-54 | -1.69E-46 |
| MS.gene051852 | MS.gene75412 | 0.805356 | 1.39E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene75413 | 0.835906 | 1.28E-56 | -1.69E-46 |
| MS.gene051852 | MS.gene75564 | 0.816175 | 6.33E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene75719 | 0.837267 | 5.75E-57 | -1.69E-46 |
| MS.gene051852 | MS.gene75941 | 0.831421 | 1.69E-55 | -1.69E-46 |
| MS.gene051852 | MS.gene76314 | 0.80806 | 3.73E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene77361 | 0.817271 | 3.60E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene78829 | 0.803599 | 3.23E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene79120 | 0.812118 | 4.98E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene80201 | 0.838418 | 2.91E-57 | -1.69E-46 |
| MS.gene051852 | MS.gene80205 | 0.832719 | 8.05E-56 | -1.69E-46 |
| MS.gene051852 | MS.gene80557 | 0.82369 | 1.21E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene80732 | 0.814589 | 1.43E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene82989 | 0.813397 | 2.61E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene83022 | 0.813086 | 3.06E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene83849 | 0.818807 | 1.62E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene84179 | 0.814818 | 1.27E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene84345 | 0.806173 | 9.35E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene84498 | 0.837638 | 4.62E-57 | -1.69E-46 |
| MS.gene051852 | MS.gene85610 | 0.805656 | 1.20E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene86267 | 0.802068 | 6.68E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene87622 | 0.802458 | 5.56E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene88032 | 0.820072 | 8.32E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene88147 | 0.821533 | 3.84E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene88254 | 0.836411 | 9.51E-57 | -1.69E-46 |
| MS.gene051852 | MS.gene88255 | 0.812905 | 3.35E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene88927 | 0.819368 | 1.21E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene89104 | 0.800851 | 1.19E-48 | -1.69E-46 |
| MS.gene051852 | MS.gene89368 | 0.802255 | 6.12E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene89369 | 0.802622 | 5.14E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene89378 | 0.812637 | 3.83E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene89985 | 0.822302 | 2.55E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene90260 | 0.837699 | 4.46E-57 | -1.69E-46 |
| MS.gene051852 | MS.gene90263 | 0.845474 | 3.97E-59 | -1.69E-46 |
| MS.gene051852 | MS.gene92390 | 0.801837 | 7.46E-49 | -1.69E-46 |
| MS.gene051852 | MS.gene94068 | 0.812404 | 4.31E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene94274 | 0.820125 | 8.09E-53 | -1.69E-46 |
| MS.gene051852 | MS.gene94674 | 0.813599 | 2.36E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene95562 | 0.815615 | 8.44E-52 | -1.69E-46 |
| MS.gene051852 | MS.gene95614 | 0.813392 | 2.62E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene97459 | 0.850308 | 1.85E-60 | -1.69E-46 |
| MS.gene051852 | MS.gene98990 | 0.810281 | 1.25E-50 | -1.69E-46 |
| MS.gene051852 | MS.gene99525 | 0.831468 | 1.64E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051852.t1 | MTR_4g125990 | 89.922 | 129 | 4 | 4 | 1 | 126 | 1 | 123 | 9.58e-75 | 218 |
| MS.gene051852.t1 | MTR_8g018320 | 50.000 | 120 | 42 | 3 | 3 | 122 | 2 | 103 | 1.77e-27 | 97.8 |
| MS.gene051852.t1 | MTR_2g099630 | 48.387 | 124 | 44 | 6 | 3 | 125 | 2 | 106 | 1.44e-26 | 95.5 |
| MS.gene051852.t1 | MTR_3g104640 | 52.756 | 127 | 42 | 4 | 1 | 126 | 1 | 110 | 1.78e-26 | 95.5 |
| MS.gene051852.t1 | MTR_8g018360 | 49.587 | 121 | 43 | 3 | 3 | 123 | 2 | 104 | 2.16e-26 | 97.4 |
| MS.gene051852.t1 | MTR_1g015810 | 50.000 | 128 | 48 | 5 | 1 | 124 | 1 | 116 | 1.45e-20 | 80.9 |
| MS.gene051852.t1 | MTR_7g109290 | 54.386 | 57 | 25 | 1 | 70 | 126 | 36 | 91 | 1.52e-17 | 72.0 |
| MS.gene051852.t1 | MTR_1g087730 | 51.923 | 52 | 25 | 0 | 75 | 126 | 55 | 106 | 2.68e-16 | 69.3 |
| MS.gene051852.t1 | MTR_1g098310 | 54.386 | 57 | 23 | 1 | 72 | 125 | 29 | 85 | 8.32e-12 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051852.t1 | AT2G19460 | 53.846 | 130 | 40 | 6 | 1 | 124 | 1 | 116 | 3.82e-34 | 115 |
| MS.gene051852.t1 | AT2G19460 | 53.077 | 130 | 41 | 6 | 1 | 124 | 53 | 168 | 7.74e-34 | 115 |
| MS.gene051852.t1 | AT5G11970 | 51.181 | 127 | 38 | 6 | 1 | 126 | 1 | 104 | 2.27e-30 | 105 |
| MS.gene051852.t1 | AT3G13910 | 60.294 | 68 | 22 | 2 | 55 | 117 | 30 | 97 | 3.25e-19 | 76.6 |
| MS.gene051852.t1 | AT3G13910 | 60.294 | 68 | 22 | 2 | 55 | 117 | 30 | 97 | 6.16e-19 | 76.6 |
| MS.gene051852.t1 | AT3G05725 | 34.848 | 132 | 70 | 4 | 1 | 125 | 1 | 123 | 6.28e-17 | 71.6 |
| MS.gene051852.t1 | AT3G62640 | 48.077 | 52 | 27 | 0 | 74 | 125 | 59 | 110 | 7.25e-15 | 65.9 |
| MS.gene051852.t1 | AT1G72720 | 36.441 | 118 | 59 | 4 | 9 | 125 | 23 | 125 | 8.55e-15 | 66.2 |
| MS.gene051852.t1 | AT2G47480 | 45.902 | 61 | 33 | 0 | 64 | 124 | 48 | 108 | 9.91e-15 | 65.5 |
| MS.gene051852.t1 | AT4G09890 | 59.459 | 37 | 15 | 0 | 82 | 118 | 39 | 75 | 8.81e-11 | 54.7 |
Find 22 sgRNAs with CRISPR-Local
Find 30 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCCATCAGCGTAGGATT+TGG | 0.309332 | 8.2:+6567102 | None:intergenic |
| TGTTGTTACCAATCTGGTTT+TGG | 0.327376 | 8.2:+6566969 | None:intergenic |
| TGTTGTTGTTGTTACCAATC+TGG | 0.354115 | 8.2:+6566963 | None:intergenic |
| GTAAACTCAAAGGCTCTCTT+AGG | 0.367994 | 8.2:-6566814 | MS.gene051852:CDS |
| AAGAAAGGTAAATCCACAAA+TGG | 0.395506 | 8.2:-6566923 | MS.gene051852:CDS |
| TACAAGGTTTATTCTGTTGA+AGG | 0.413127 | 8.2:-6566836 | MS.gene051852:CDS |
| GAAGAAGGTGCAGCAGAGTA+AGG | 0.442974 | 8.2:+6567064 | None:intergenic |
| AGATGCAACAGAGTTGTTCA+TGG | 0.485910 | 8.2:-6566767 | MS.gene051852:CDS |
| AACGATGTTAAGTTCAAGAA+AGG | 0.501790 | 8.2:-6566938 | MS.gene051852:CDS |
| ATGCCTCCTCCGTTTGAAGA+AGG | 0.518627 | 8.2:+6567049 | None:intergenic |
| AGAAAGGTAAATCCACAAAT+GGG | 0.520575 | 8.2:-6566922 | MS.gene051852:CDS |
| TCTGCTGCACCTTCTTCAAA+CGG | 0.523824 | 8.2:-6567058 | MS.gene051852:CDS |
| ACCCAAAACCAAAACCAGAT+TGG | 0.525292 | 8.2:-6566977 | MS.gene051852:CDS |
| CTGCATCCTTCCATCAGCGT+AGG | 0.527015 | 8.2:+6567096 | None:intergenic |
| GCAACAGAGTTGTTCATGGC+TGG | 0.536888 | 8.2:-6566763 | MS.gene051852:CDS |
| TTTGGATCTGAAATCTTCCA+TGG | 0.557041 | 8.2:+6567120 | None:intergenic |
| AGATCCAAATCCTACGCTGA+TGG | 0.558533 | 8.2:-6567106 | MS.gene051852:CDS |
| TCTGTTGAAGGTAAACTCAA+AGG | 0.562516 | 8.2:-6566824 | MS.gene051852:CDS |
| GCACCTTCTTCAAACGGAGG+AGG | 0.581419 | 8.2:-6567052 | MS.gene051852:CDS |
| CCAAATCCTACGCTGATGGA+AGG | 0.584749 | 8.2:-6567102 | MS.gene051852:CDS |
| TCAGTGATCCTGAATTGCAG+AGG | 0.668157 | 8.2:-6566877 | MS.gene051852:CDS |
| GCTGCACCTTCTTCAAACGG+AGG | 0.686822 | 8.2:-6567055 | MS.gene051852:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAAAAGAGTTGCTAGTTACA+AGG | - | chr8.2:6567026-6567045 | MS.gene051852:CDS | 30.0% | |
| AACGATGTTAAGTTCAAGAA+AGG | - | chr8.2:6566940-6566959 | MS.gene051852:CDS | 30.0% | |
| AAGAAAGGTAAATCCACAAA+TGG | - | chr8.2:6566955-6566974 | MS.gene051852:CDS | 30.0% | |
| AGAAAGGTAAATCCACAAAT+GGG | - | chr8.2:6566956-6566975 | MS.gene051852:CDS | 30.0% | |
| TACAAGGTTTATTCTGTTGA+AGG | - | chr8.2:6567042-6567061 | MS.gene051852:CDS | 30.0% | |
| ATGGGTCAACTTCAAAAAGT+TGG | - | chr8.2:6566974-6566993 | MS.gene051852:CDS | 35.0% | |
| TCTGTTGAAGGTAAACTCAA+AGG | - | chr8.2:6567054-6567073 | MS.gene051852:CDS | 35.0% | |
| ! | TGTTGTTGTTGTTACCAATC+TGG | + | chr8.2:6566918-6566937 | None:intergenic | 35.0% |
| !! | TGTTGTTACCAATCTGGTTT+TGG | + | chr8.2:6566912-6566931 | None:intergenic | 35.0% |
| !!! | ACCAATCTGGTTTTGGTTTT+GGG | + | chr8.2:6566905-6566924 | None:intergenic | 35.0% |
| !!! | CTCTTAGGAAGAGTTTTAAG+TGG | - | chr8.2:6567079-6567098 | MS.gene051852:CDS | 35.0% |
| !!! | CTTTTTTTCCTCTGCAATTC+AGG | + | chr8.2:6567012-6567031 | None:intergenic | 35.0% |
| !!! | TACCAATCTGGTTTTGGTTT+TGG | + | chr8.2:6566906-6566925 | None:intergenic | 35.0% |
| !!! | TTTTGAAGTTGACCCATTTG+TGG | + | chr8.2:6566971-6566990 | None:intergenic | 35.0% |
| ACCCAAAACCAAAACCAGAT+TGG | - | chr8.2:6566901-6566920 | MS.gene051852:CDS | 40.0% | |
| AGATGCAACAGAGTTGTTCA+TGG | - | chr8.2:6567111-6567130 | MS.gene051852:CDS | 40.0% | |
| GTAAACTCAAAGGCTCTCTT+AGG | - | chr8.2:6567064-6567083 | MS.gene051852:CDS | 40.0% | |
| !!! | ATCTGGTTTTGGTTTTGGGT+TGG | + | chr8.2:6566901-6566920 | None:intergenic | 40.0% |
| AGATCCAAATCCTACGCTGA+TGG | - | chr8.2:6566772-6566791 | MS.gene051852:CDS | 45.0% | |
| TCAGTGATCCTGAATTGCAG+AGG | - | chr8.2:6567001-6567020 | MS.gene051852:CDS | 45.0% | |
| TCTGCTGCACCTTCTTCAAA+CGG | - | chr8.2:6566820-6566839 | MS.gene051852:CDS | 45.0% | |
| !!! | GTTTTGGGTTGGATGAACAG+AGG | + | chr8.2:6566890-6566909 | None:intergenic | 45.0% |
| ATGCCTCCTCCGTTTGAAGA+AGG | + | chr8.2:6566832-6566851 | None:intergenic | 50.0% | |
| CCAAATCCTACGCTGATGGA+AGG | - | chr8.2:6566776-6566795 | MS.gene051852:CDS | 50.0% | |
| CCTTCCATCAGCGTAGGATT+TGG | + | chr8.2:6566779-6566798 | None:intergenic | 50.0% | |
| GCAACAGAGTTGTTCATGGC+TGG | - | chr8.2:6567115-6567134 | MS.gene051852:CDS | 50.0% | |
| ! | GAAGAAGGTGCAGCAGAGTA+AGG | + | chr8.2:6566817-6566836 | None:intergenic | 50.0% |
| CTGCATCCTTCCATCAGCGT+AGG | + | chr8.2:6566785-6566804 | None:intergenic | 55.0% | |
| GCACCTTCTTCAAACGGAGG+AGG | - | chr8.2:6566826-6566845 | MS.gene051852:CDS | 55.0% | |
| GCTGCACCTTCTTCAAACGG+AGG | - | chr8.2:6566823-6566842 | MS.gene051852:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 6566760 | 6567140 | 6566760 | ID=MS.gene051852 |
| chr8.2 | mRNA | 6566760 | 6567140 | 6566760 | ID=MS.gene051852.t1;Parent=MS.gene051852 |
| chr8.2 | exon | 6566760 | 6567140 | 6566760 | ID=MS.gene051852.t1.exon1;Parent=MS.gene051852.t1 |
| chr8.2 | CDS | 6566760 | 6567140 | 6566760 | ID=cds.MS.gene051852.t1;Parent=MS.gene051852.t1 |
| Gene Sequence |
| Protein sequence |
