Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58765.t1 | XP_024637800.1 | 96.6 | 291 | 0 | 1 | 1 | 281 | 52 | 342 | 1.30E-147 | 532.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58765.t1 | P48000 | 74.1 | 274 | 52 | 3 | 19 | 278 | 159 | 427 | 8.0e-109 | 394.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58765.t1 | I3SDT1 | 96.2 | 291 | 1 | 1 | 1 | 281 | 52 | 342 | 2.8e-147 | 530.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene58765.t1 | TF | HB-KNOX |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050826 | MS.gene58765 | 0.810124 | 1.35E-50 | -1.69E-46 |
| MS.gene051122 | MS.gene58765 | 0.829078 | 6.30E-55 | -1.69E-46 |
| MS.gene052493 | MS.gene58765 | 0.802258 | 6.11E-49 | -1.69E-46 |
| MS.gene052674 | MS.gene58765 | 0.819259 | 1.28E-52 | -1.69E-46 |
| MS.gene052675 | MS.gene58765 | 0.811427 | 7.04E-51 | -1.69E-46 |
| MS.gene052677 | MS.gene58765 | 0.815458 | 9.15E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene58765 | 0.80524 | 1.47E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene58765 | 0.818864 | 1.57E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene58765 | 0.817158 | 3.81E-52 | -1.69E-46 |
| MS.gene055926 | MS.gene58765 | 0.800831 | 1.20E-48 | -1.69E-46 |
| MS.gene056779 | MS.gene58765 | 0.824168 | 9.34E-54 | -1.69E-46 |
| MS.gene05761 | MS.gene58765 | 0.817001 | 4.14E-52 | -1.69E-46 |
| MS.gene058223 | MS.gene58765 | -0.809662 | 1.69E-50 | -1.69E-46 |
| MS.gene059283 | MS.gene58765 | 0.800227 | 1.59E-48 | -1.69E-46 |
| MS.gene060802 | MS.gene58765 | 0.80834 | 3.25E-50 | -1.69E-46 |
| MS.gene060850 | MS.gene58765 | 0.832534 | 8.95E-56 | -1.69E-46 |
| MS.gene060851 | MS.gene58765 | 0.848288 | 6.74E-60 | -1.69E-46 |
| MS.gene060852 | MS.gene58765 | 0.846845 | 1.68E-59 | -1.69E-46 |
| MS.gene060932 | MS.gene58765 | 0.829381 | 5.31E-55 | -1.69E-46 |
| MS.gene06121 | MS.gene58765 | 0.819443 | 1.16E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58765.t1 | MTR_4g116545 | 96.220 | 291 | 0 | 2 | 1 | 281 | 52 | 341 | 0.0 | 574 |
| MS.gene58765.t1 | MTR_4g116545 | 96.416 | 279 | 0 | 1 | 1 | 269 | 52 | 330 | 0.0 | 556 |
| MS.gene58765.t1 | MTR_2g461240 | 81.570 | 293 | 39 | 5 | 2 | 281 | 77 | 367 | 8.81e-169 | 472 |
| MS.gene58765.t1 | MTR_1g012960 | 76.296 | 270 | 50 | 4 | 15 | 271 | 169 | 437 | 8.16e-148 | 421 |
| MS.gene58765.t1 | MTR_3g106400 | 75.000 | 268 | 49 | 4 | 18 | 269 | 105 | 370 | 2.26e-142 | 405 |
| MS.gene58765.t1 | MTR_3g106400 | 75.000 | 268 | 49 | 4 | 18 | 269 | 105 | 370 | 2.53e-142 | 405 |
| MS.gene58765.t1 | MTR_3g106400 | 75.000 | 268 | 49 | 4 | 18 | 269 | 105 | 370 | 1.19e-141 | 405 |
| MS.gene58765.t1 | MTR_5g011070 | 64.388 | 278 | 85 | 3 | 15 | 278 | 23 | 300 | 5.73e-123 | 353 |
| MS.gene58765.t1 | MTR_1g084060 | 33.473 | 239 | 148 | 5 | 17 | 254 | 17 | 245 | 5.18e-28 | 108 |
| MS.gene58765.t1 | MTR_1g084060 | 33.473 | 239 | 148 | 5 | 17 | 254 | 17 | 245 | 1.08e-27 | 108 |
| MS.gene58765.t1 | MTR_2g024390 | 31.933 | 238 | 141 | 6 | 20 | 254 | 118 | 337 | 1.28e-26 | 107 |
| MS.gene58765.t1 | MTR_1g017080 | 32.794 | 247 | 147 | 6 | 10 | 254 | 113 | 342 | 1.30e-25 | 104 |
| MS.gene58765.t1 | MTR_5g033720 | 32.500 | 240 | 139 | 7 | 20 | 254 | 73 | 294 | 7.38e-24 | 99.0 |
| MS.gene58765.t1 | MTR_5g085860 | 29.339 | 242 | 135 | 8 | 22 | 254 | 49 | 263 | 2.18e-19 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58765.t1 | AT5G11060 | 77.007 | 274 | 44 | 4 | 19 | 278 | 123 | 391 | 1.00e-149 | 424 |
| MS.gene58765.t1 | AT5G25220 | 76.838 | 272 | 44 | 3 | 19 | 276 | 159 | 425 | 1.28e-149 | 426 |
| MS.gene58765.t1 | AT5G25220 | 76.981 | 265 | 42 | 3 | 19 | 269 | 159 | 418 | 6.49e-146 | 416 |
| MS.gene58765.t1 | AT4G32040 | 70.037 | 267 | 64 | 6 | 19 | 272 | 118 | 381 | 7.26e-127 | 366 |
| MS.gene58765.t1 | AT4G32040 | 70.833 | 264 | 61 | 6 | 19 | 269 | 118 | 378 | 1.09e-126 | 365 |
| MS.gene58765.t1 | AT1G62990 | 61.957 | 276 | 88 | 4 | 8 | 269 | 18 | 290 | 2.45e-120 | 346 |
| MS.gene58765.t1 | AT1G23380 | 34.483 | 261 | 129 | 10 | 6 | 254 | 75 | 305 | 4.64e-29 | 113 |
| MS.gene58765.t1 | AT4G08150 | 34.553 | 246 | 130 | 7 | 20 | 254 | 135 | 360 | 2.01e-28 | 112 |
| MS.gene58765.t1 | AT1G70510 | 33.197 | 244 | 130 | 9 | 20 | 254 | 70 | 289 | 4.73e-28 | 110 |
| MS.gene58765.t1 | AT1G23380 | 34.221 | 263 | 129 | 11 | 6 | 254 | 75 | 307 | 3.21e-27 | 108 |
| MS.gene58765.t1 | AT1G70510 | 31.967 | 244 | 137 | 8 | 20 | 254 | 70 | 293 | 9.39e-27 | 106 |
| MS.gene58765.t1 | AT1G62360 | 33.473 | 239 | 138 | 6 | 20 | 254 | 122 | 343 | 1.33e-23 | 99.4 |
Find 69 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGAGCTTGATCACTTTA+TGG | 0.159839 | 8.1:+10404093 | MS.gene58765:CDS |
| TTCTGTTGGAATTGGAAATA+TGG | 0.205132 | 8.1:+10404066 | MS.gene58765:CDS |
| CTACCTCTTGCGCTTGGTTT+TGG | 0.213600 | 8.1:-10408533 | None:intergenic |
| AAATATTCTTCTGTTGGAAT+TGG | 0.277819 | 8.1:+10404058 | MS.gene58765:CDS |
| GAATACAAAGCAGAGATATT+AGG | 0.306187 | 8.1:+10403917 | MS.gene58765:CDS |
| AATTAAAGCAAATAAATAAC+TGG | 0.339856 | 8.1:+10408455 | MS.gene58765:CDS |
| GGTGGCAATCACATTCTAAA+TGG | 0.351052 | 8.1:+10408275 | MS.gene58765:CDS |
| TTTCGCAATTGTTGTCATTC+CGG | 0.366302 | 8.1:-10403880 | None:intergenic |
| GCTAGATTGGTGCAGGAAAC+AGG | 0.372105 | 8.1:+10408427 | MS.gene58765:CDS |
| GGTCTTTGATGGAACGAGTT+AGG | 0.372149 | 8.1:+10408128 | MS.gene58765:CDS |
| AACGAAGGAAGCAGCCTTGA+TGG | 0.386285 | 8.1:+10408058 | MS.gene58765:CDS |
| AGAGACTGAAAGGTCTTTGA+TGG | 0.405462 | 8.1:+10408117 | MS.gene58765:CDS |
| GGCGTCGATACTCTTGGCTT+TGG | 0.416116 | 8.1:+10408079 | MS.gene58765:CDS |
| TGGAGGCAGTGATGGCTTGT+TGG | 0.423089 | 8.1:+10406613 | MS.gene58765:CDS |
| GGAGGCAGTGATGGCTTGTT+GGG | 0.429166 | 8.1:+10406614 | MS.gene58765:CDS |
| ATTATGAGCAGGTGTATCTT+CGG | 0.435057 | 8.1:+10407967 | MS.gene58765:intron |
| ATTCTACGAAAGAGAAGAGC+TGG | 0.436569 | 8.1:+10408214 | MS.gene58765:CDS |
| CTTGATGGCGTCGATACTCT+TGG | 0.437382 | 8.1:+10408073 | MS.gene58765:CDS |
| CAGTCTCTGCAAAGCTTGAC+AGG | 0.437852 | 8.1:+10406645 | MS.gene58765:CDS |
| CATAAAGTGATCAAGCTCCT+TGG | 0.444189 | 8.1:-10404092 | None:intergenic |
| ATCCTTGGAAGCTGATCAAC+CGG | 0.446297 | 8.1:-10403998 | None:intergenic |
| ATTGCCACCAAGCTTTCAAA+AGG | 0.450033 | 8.1:-10408261 | None:intergenic |
| ATGATATCTTACAGTTGGAT+AGG | 0.451403 | 8.1:-10408299 | None:intergenic |
| GGAGGAAGATAAGGCTAGAT+TGG | 0.457401 | 8.1:+10408414 | MS.gene58765:intron |
| TTGTTGCAACTGTTCTTTGA+AGG | 0.460514 | 8.1:-10406571 | None:intergenic |
| GATTGATGCTCAGCTTCAAC+AGG | 0.462130 | 8.1:+10404018 | MS.gene58765:CDS |
| TCAATCAAAGGAAAAGGAAC+TGG | 0.471396 | 8.1:+10408482 | MS.gene58765:CDS |
| AGAAGAGCTGGGAAACTCCC+TGG | 0.471897 | 8.1:+10408226 | MS.gene58765:CDS |
| GTATCTTCGGGTGAAGGAAC+AGG | 0.474653 | 8.1:+10407980 | MS.gene58765:CDS |
| ATAAAGTGATCAAGCTCCTT+GGG | 0.475708 | 8.1:-10404091 | None:intergenic |
| AAAAGGGATGTGGTGTCCCC+AGG | 0.478534 | 8.1:-10408244 | None:intergenic |
| TTATGAGCAGGTGTATCTTC+GGG | 0.502400 | 8.1:+10407968 | MS.gene58765:intron |
| GTCAGACGATGAAGATGAGC+AGG | 0.503765 | 8.1:+10408012 | MS.gene58765:CDS |
| TCAGTCTCTGTGGGGACTAG+AGG | 0.508899 | 8.1:-10408103 | None:intergenic |
| CACCGGTTGATCAGCTTCCA+AGG | 0.508909 | 8.1:+10403996 | MS.gene58765:CDS |
| GAAGAGCTGGGAAACTCCCT+GGG | 0.514675 | 8.1:+10408227 | MS.gene58765:CDS |
| TGAAGCTGAGCATCAATCCT+TGG | 0.515964 | 8.1:-10404013 | None:intergenic |
| ATGGTACTACCTCTTGCGCT+TGG | 0.518902 | 8.1:-10408539 | None:intergenic |
| GGTTTATCAATCAAAGGAAA+AGG | 0.523630 | 8.1:+10408476 | MS.gene58765:CDS |
| TCATGCCATGGAGGCAGTGA+TGG | 0.523998 | 8.1:+10406605 | MS.gene58765:CDS |
| GCTCCAAAACCAAGCGCAAG+AGG | 0.527063 | 8.1:+10408530 | MS.gene58765:CDS |
| TGATATCTTACAGTTGGATA+GGG | 0.527756 | 8.1:-10408298 | None:intergenic |
| AGATAAGGCTAGATTGGTGC+AGG | 0.536981 | 8.1:+10408420 | MS.gene58765:CDS |
| CGCAATTGTTGTCATTCCGG+TGG | 0.538196 | 8.1:-10403877 | None:intergenic |
| TTTGGAGCTACTAGAGGATG+GGG | 0.544084 | 8.1:-10408515 | None:intergenic |
| AAAGACCTTTCAGTCTCTGT+GGG | 0.544199 | 8.1:-10408112 | None:intergenic |
| AAAGCATGGATCGGAACCAC+CGG | 0.544529 | 8.1:+10403861 | None:intergenic |
| GTGTCTCAGAATTGCGACAC+CGG | 0.547847 | 8.1:+10403979 | MS.gene58765:CDS |
| ACAAGCCATCACTGCCTCCA+TGG | 0.554613 | 8.1:-10406610 | None:intergenic |
| GCAGGTGTATCTTCGGGTGA+AGG | 0.559026 | 8.1:+10407974 | MS.gene58765:intron |
| ATAACTGGTTTATCAATCAA+AGG | 0.563797 | 8.1:+10408470 | MS.gene58765:CDS |
| CCAAGCTTTCAAAAGGGATG+TGG | 0.573990 | 8.1:-10408254 | None:intergenic |
| AAAGGGATGTGGTGTCCCCA+GGG | 0.576707 | 8.1:-10408243 | None:intergenic |
| TTCTACGAAAGAGAAGAGCT+GGG | 0.579028 | 8.1:+10408215 | MS.gene58765:CDS |
| ACATGTCCGTGTTCATGCCA+TGG | 0.585181 | 8.1:+10406593 | MS.gene58765:CDS |
| TAGTCCCCACAGAGACTGAA+AGG | 0.587654 | 8.1:+10408107 | MS.gene58765:CDS |
| GAATGACAACAATTGCGAAA+CGG | 0.591352 | 8.1:+10403883 | MS.gene58765:CDS |
| CAAAGACCTTTCAGTCTCTG+TGG | 0.597386 | 8.1:-10408113 | None:intergenic |
| GATAATAATTGATCATAGAG+TGG | 0.604741 | 8.1:-10403944 | None:intergenic |
| CAAGAGTATCGACGCCATCA+AGG | 0.607066 | 8.1:-10408072 | None:intergenic |
| TTGCCACCAAGCTTTCAAAA+GGG | 0.608799 | 8.1:-10408260 | None:intergenic |
| AATTGGAAATATGGATCCCA+AGG | 0.614560 | 8.1:+10404075 | MS.gene58765:CDS |
| CTGCCTCCATGGCATGAACA+CGG | 0.617572 | 8.1:-10406599 | None:intergenic |
| AACGCTAGGTTATACAACGA+AGG | 0.654984 | 8.1:+10408043 | MS.gene58765:CDS |
| TTGAAGCATGAACTCAAACA+AGG | 0.656993 | 8.1:+10408157 | MS.gene58765:CDS |
| AGCAGGCAGAGAGTAACGCT+AGG | 0.662764 | 8.1:+10408029 | MS.gene58765:CDS |
| TGTCCGTGTTCATGCCATGG+AGG | 0.690107 | 8.1:+10406596 | MS.gene58765:CDS |
| AAGACCTTTCAGTCTCTGTG+GGG | 0.730543 | 8.1:-10408111 | None:intergenic |
| AAGAGCTGGGAAACTCCCTG+GGG | 0.766388 | 8.1:+10408228 | MS.gene58765:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATGTTGTATTTAAAA+AGG | + | chr8.1:10407402-10407421 | MS.gene58765:intron | 10.0% |
| !! | AATTATAAACATTAAATGTA+CGG | - | chr8.1:10407726-10407745 | None:intergenic | 10.0% |
| !! | CATTTAAATTTATAATATGT+AGG | - | chr8.1:10404586-10404605 | None:intergenic | 10.0% |
| !! | CTACATATTATAAATTTAAA+TGG | + | chr8.1:10404584-10404603 | MS.gene58765:intron | 10.0% |
| !! | TAAAAACAAACATAATAAAA+TGG | + | chr8.1:10404454-10404473 | MS.gene58765:intron | 10.0% |
| !! | TATTCATAATAGATTATTAT+AGG | + | chr8.1:10405482-10405501 | MS.gene58765:intron | 10.0% |
| !!! | AAAATTTTTTATCTTGAAAA+TGG | + | chr8.1:10405544-10405563 | MS.gene58765:intron | 10.0% |
| !!! | ATATATATGAATTGTTTTAT+AGG | + | chr8.1:10408393-10408412 | MS.gene58765:intron | 10.0% |
| !!! | TTAGTCATATAAAATTTTAA+TGG | - | chr8.1:10407633-10407652 | None:intergenic | 10.0% |
| !! | AAAAAAAACTCACTAAAAAA+AGG | - | chr8.1:10405733-10405752 | None:intergenic | 15.0% |
| !! | AAAAATAATAAACAATCCTT+TGG | - | chr8.1:10407142-10407161 | None:intergenic | 15.0% |
| !! | AAAAGTTCTTCAAATAAAAA+AGG | - | chr8.1:10407698-10407717 | None:intergenic | 15.0% |
| !! | AACCCTAAATAAATATTATT+TGG | + | chr8.1:10406304-10406323 | MS.gene58765:intron | 15.0% |
| !! | AATTAAAGCAAATAAATAAC+TGG | + | chr8.1:10408455-10408474 | MS.gene58765:CDS | 15.0% |
| !! | ATTCAAATTCAAATAATGAT+CGG | + | chr8.1:10406242-10406261 | MS.gene58765:intron | 15.0% |
| !! | CAAACTCAAATAAAAATATT+TGG | - | chr8.1:10406428-10406447 | None:intergenic | 15.0% |
| !! | GACTATTTAACAATTAAATA+AGG | + | chr8.1:10404742-10404761 | MS.gene58765:intron | 15.0% |
| !! | GTCCAAATAATATTTATTTA+GGG | - | chr8.1:10406309-10406328 | None:intergenic | 15.0% |
| !! | TCTTATAAACTACATTATTA+TGG | + | chr8.1:10407594-10407613 | MS.gene58765:intron | 15.0% |
| !! | TGTCCAAATAATATTTATTT+AGG | - | chr8.1:10406310-10406329 | None:intergenic | 15.0% |
| !! | TTACTATATCTCTAAATTTA+TGG | + | chr8.1:10404201-10404220 | MS.gene58765:intron | 15.0% |
| !! | TTTAACAATTAAATAAGGAT+AGG | + | chr8.1:10404747-10404766 | MS.gene58765:intron | 15.0% |
| !!! | ATTTGTTAATGATTCAAAAA+AGG | - | chr8.1:10405630-10405649 | None:intergenic | 15.0% |
| !!! | TTATTATGATTAGTTGTATA+GGG | + | chr8.1:10406760-10406779 | MS.gene58765:intron | 15.0% |
| !!! | TTTCTAAGATATTTTATGAA+AGG | + | chr8.1:10404485-10404504 | MS.gene58765:intron | 15.0% |
| !!! | TTTTTCAAGACATTATTTTA+TGG | + | chr8.1:10404380-10404399 | MS.gene58765:intron | 15.0% |
| !! | AAAAAGAGAGAAAATAGTAA+AGG | - | chr8.1:10404887-10404906 | None:intergenic | 20.0% |
| !! | AACTAACATAAAATGGTTTA+TGG | - | chr8.1:10408561-10408580 | None:intergenic | 20.0% |
| !! | AAGAATAATAATGAGGATAA+TGG | + | chr8.1:10405038-10405057 | MS.gene58765:intron | 20.0% |
| !! | AAGTCATAACTAACATAAAA+TGG | - | chr8.1:10408568-10408587 | None:intergenic | 20.0% |
| !! | AATCTCAAATATTAAAAGAG+TGG | - | chr8.1:10404535-10404554 | None:intergenic | 20.0% |
| !! | CATAATTTAGTGCAATAAAT+TGG | - | chr8.1:10404558-10404577 | None:intergenic | 20.0% |
| !! | CATACTAGTTATATAATAGA+AGG | + | chr8.1:10407205-10407224 | MS.gene58765:intron | 20.0% |
| !! | CTAAAATAATCCACATAAAA+TGG | - | chr8.1:10407524-10407543 | None:intergenic | 20.0% |
| !! | CTAACAAGACAATAAATAAT+GGG | + | chr8.1:10404138-10404157 | MS.gene58765:intron | 20.0% |
| !! | CTCAAAAAAAAAATTGTTTC+TGG | + | chr8.1:10406211-10406230 | MS.gene58765:intron | 20.0% |
| !! | TAATAAGATCAATGAAACTA+TGG | + | chr8.1:10407938-10407957 | MS.gene58765:intron | 20.0% |
| !! | TAGTACAAATAGAAGATTAT+GGG | + | chr8.1:10404968-10404987 | MS.gene58765:intron | 20.0% |
| !! | TATAAACTACATTATTATGG+AGG | + | chr8.1:10407597-10407616 | MS.gene58765:intron | 20.0% |
| !! | TATCTTTACAAATACGTAAT+TGG | - | chr8.1:10404431-10404450 | None:intergenic | 20.0% |
| !! | TCACAAAAAGAATAATAATG+AGG | + | chr8.1:10405031-10405050 | MS.gene58765:intron | 20.0% |
| !! | TCTAACAAGACAATAAATAA+TGG | + | chr8.1:10404137-10404156 | MS.gene58765:intron | 20.0% |
| !! | TCTTAAATGTGGATAAATAA+AGG | - | chr8.1:10404702-10404721 | None:intergenic | 20.0% |
| !!! | AACTCTTTTTTTTTCTTCAT+AGG | - | chr8.1:10407378-10407397 | None:intergenic | 20.0% |
| !!! | AATTTGTCTCATTTTGTATT+GGG | + | chr8.1:10407442-10407461 | MS.gene58765:intron | 20.0% |
| !!! | CAACTTTTATTATTTTCTGA+TGG | + | chr8.1:10405081-10405100 | MS.gene58765:intron | 20.0% |
| !!! | CTGTGTAATTTTTTTTTTGA+GGG | + | chr8.1:10404795-10404814 | MS.gene58765:intron | 20.0% |
| !!! | GTTATTATGATTAGTTGTAT+AGG | + | chr8.1:10406759-10406778 | MS.gene58765:intron | 20.0% |
| !!! | TAAATGGATAAAAGAGTATT+TGG | + | chr8.1:10404600-10404619 | MS.gene58765:intron | 20.0% |
| !!! | TATATGAATTGTTTTATAGG+AGG | + | chr8.1:10408396-10408415 | MS.gene58765:intron | 20.0% |
| !!! | TCTGTGTAATTTTTTTTTTG+AGG | + | chr8.1:10404794-10404813 | MS.gene58765:intron | 20.0% |
| !!! | TGAAAACTTTTTACAAAGAA+TGG | - | chr8.1:10407561-10407580 | None:intergenic | 20.0% |
| !!! | TTTTATGTGGATTATTTTAG+AGG | + | chr8.1:10407524-10407543 | MS.gene58765:intron | 20.0% |
| ! | AAATATTCTTCTGTTGGAAT+TGG | + | chr8.1:10404058-10404077 | MS.gene58765:CDS | 25.0% |
| ! | AACGATAAGAATCAAAGATA+CGG | - | chr8.1:10406017-10406036 | None:intergenic | 25.0% |
| ! | AAGACACTATGAATTAAACT+AGG | - | chr8.1:10404325-10404344 | None:intergenic | 25.0% |
| ! | AATAATGAGAATGTACATCT+TGG | + | chr8.1:10405448-10405467 | MS.gene58765:intron | 25.0% |
| ! | ACAAGCTTATCATATAATCT+AGG | - | chr8.1:10405661-10405680 | None:intergenic | 25.0% |
| ! | ACTTAAATCACACTAAAAAG+AGG | - | chr8.1:10406132-10406151 | None:intergenic | 25.0% |
| ! | ATATGATTACATTCATCAGA+AGG | + | chr8.1:10407350-10407369 | MS.gene58765:intron | 25.0% |
| ! | ATCCACATAAAATGGAAATA+TGG | - | chr8.1:10407516-10407535 | None:intergenic | 25.0% |
| ! | ATTATTTAAGCATGGCTAAT+TGG | + | chr8.1:10406489-10406508 | MS.gene58765:intron | 25.0% |
| ! | CAAGATAATAACCCTTAAAT+TGG | - | chr8.1:10405181-10405200 | None:intergenic | 25.0% |
| ! | CAAGCTTATCATATAATCTA+GGG | - | chr8.1:10405660-10405679 | None:intergenic | 25.0% |
| ! | CTAGTACAAATAGAAGATTA+TGG | + | chr8.1:10404967-10404986 | MS.gene58765:intron | 25.0% |
| ! | CTCAATAAACACATATATTG+AGG | + | chr8.1:10406465-10406484 | MS.gene58765:intron | 25.0% |
| ! | CTCAATATATGTGTTTATTG+AGG | - | chr8.1:10406467-10406486 | None:intergenic | 25.0% |
| ! | CTTCAAAAATATTCTTCTGT+TGG | + | chr8.1:10404052-10404071 | MS.gene58765:CDS | 25.0% |
| ! | GATAATAATTGATCATAGAG+TGG | - | chr8.1:10403947-10403966 | None:intergenic | 25.0% |
| ! | GATAATAGTTAACTTTGCTT+TGG | + | chr8.1:10406063-10406082 | MS.gene58765:intron | 25.0% |
| ! | GATTATATGATAAGCTTGTA+AGG | + | chr8.1:10405662-10405681 | MS.gene58765:intron | 25.0% |
| ! | TACTATACTCCCTTTAATAA+TGG | + | chr8.1:10405207-10405226 | MS.gene58765:intron | 25.0% |
| ! | TGGGCAAAAGTTATTAAAAT+TGG | + | chr8.1:10404157-10404176 | MS.gene58765:intron | 25.0% |
| ! | TTATTTAAGCATGGCTAATT+GGG | + | chr8.1:10406490-10406509 | MS.gene58765:intron | 25.0% |
| ! | TTATTTGCATATCTCTATGT+TGG | + | chr8.1:10408331-10408350 | MS.gene58765:intron | 25.0% |
| ! | TTTATCCAAGAATCAAATTC+TGG | + | chr8.1:10407088-10407107 | MS.gene58765:intron | 25.0% |
| !! | ATAACTGGTTTATCAATCAA+AGG | + | chr8.1:10408470-10408489 | MS.gene58765:CDS | 25.0% |
| !! | ATGATTTTCAACATTGTTTC+TGG | + | chr8.1:10406182-10406201 | MS.gene58765:intron | 25.0% |
| !! | ATTTTTACATTCTAACTTCG+AGG | + | chr8.1:10405918-10405937 | MS.gene58765:intron | 25.0% |
| !! | CAATTTGTCTCATTTTGTAT+TGG | + | chr8.1:10407441-10407460 | MS.gene58765:intron | 25.0% |
| !! | CATTTTCACTGTTTAAAAAG+AGG | + | chr8.1:10406984-10407003 | MS.gene58765:intron | 25.0% |
| !! | TATTGATGATATCTTACAGT+TGG | - | chr8.1:10408307-10408326 | None:intergenic | 25.0% |
| !! | TTATTGTCTTGTTAGAAAAC+AGG | - | chr8.1:10404133-10404152 | None:intergenic | 25.0% |
| !! | TTGAAAGCTTGTAATTTTGT+AGG | - | chr8.1:10407486-10407505 | None:intergenic | 25.0% |
| !!! | CTTGAAAACTCTGATTTTTT+AGG | + | chr8.1:10407654-10407673 | MS.gene58765:intron | 25.0% |
| !!! | TAAAAGAGTATTTGGTTTCA+TGG | + | chr8.1:10404608-10404627 | MS.gene58765:intron | 25.0% |
| !!! | TTACTACTTTCTAGTTTCTA+TGG | - | chr8.1:10407816-10407835 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTCAAGTACTTGT+TGG | - | chr8.1:10405517-10405536 | None:intergenic | 25.0% |
| AAAAACAGTGTCATCAAGTT+TGG | - | chr8.1:10405379-10405398 | None:intergenic | 30.0% | |
| AATAGACTTAGACGCATATT+GGG | + | chr8.1:10405831-10405850 | MS.gene58765:intron | 30.0% | |
| ACATTTAGTCACATCAATTG+TGG | + | chr8.1:10406363-10406382 | MS.gene58765:intron | 30.0% | |
| AGATTATGGGATTTGTATTG+TGG | + | chr8.1:10404981-10405000 | MS.gene58765:intron | 30.0% | |
| ATCGTTCTTGTATTGAACAT+TGG | + | chr8.1:10406031-10406050 | MS.gene58765:intron | 30.0% | |
| ATGATATCTTACAGTTGGAT+AGG | - | chr8.1:10408302-10408321 | None:intergenic | 30.0% | |
| ATGCTTCGTACCATTATTAA+AGG | - | chr8.1:10405220-10405239 | None:intergenic | 30.0% | |
| CAAATTCAAATAATGATCGG+AGG | + | chr8.1:10406245-10406264 | MS.gene58765:intron | 30.0% | |
| GAAAAACTGAAAGAAAGCTT+GGG | - | chr8.1:10404366-10404385 | None:intergenic | 30.0% | |
| GAATACAAAGCAGAGATATT+AGG | + | chr8.1:10403917-10403936 | MS.gene58765:CDS | 30.0% | |
| GGTTTATCAATCAAAGGAAA+AGG | + | chr8.1:10408476-10408495 | MS.gene58765:CDS | 30.0% | |
| GTAAACCAGAATTTGATTCT+TGG | - | chr8.1:10407096-10407115 | None:intergenic | 30.0% | |
| GTTTGAACTATAGTAAGAAG+TGG | - | chr8.1:10404291-10404310 | None:intergenic | 30.0% | |
| TCCACAAAATTAGGGAAATA+AGG | - | chr8.1:10404926-10404945 | None:intergenic | 30.0% | |
| TGAAAAACTGAAAGAAAGCT+TGG | - | chr8.1:10404367-10404386 | None:intergenic | 30.0% | |
| TGAAATCCAACTAGAAACAA+TGG | + | chr8.1:10406947-10406966 | MS.gene58765:intron | 30.0% | |
| TGATATCTTACAGTTGGATA+GGG | - | chr8.1:10408301-10408320 | None:intergenic | 30.0% | |
| TGCTTCGTACCATTATTAAA+GGG | - | chr8.1:10405219-10405238 | None:intergenic | 30.0% | |
| TGTCCAAACAAAAATTCTTG+TGG | + | chr8.1:10405788-10405807 | MS.gene58765:intron | 30.0% | |
| TTAAAACGTATGAGGTCTAT+AGG | + | chr8.1:10407234-10407253 | MS.gene58765:intron | 30.0% | |
| TTCTGTTGGAATTGGAAATA+TGG | + | chr8.1:10404066-10404085 | MS.gene58765:CDS | 30.0% | |
| TTGGTTGCATGGAAAAAATT+TGG | - | chr8.1:10407123-10407142 | None:intergenic | 30.0% | |
| ! | AAGCCACAAGAATTTTTGTT+TGG | - | chr8.1:10405794-10405813 | None:intergenic | 30.0% |
| ! | AATAATGGTACGAAGCATTT+AGG | + | chr8.1:10405222-10405241 | MS.gene58765:intron | 30.0% |
| ! | ATTGAGGCATTATTTAAGCA+TGG | + | chr8.1:10406481-10406500 | MS.gene58765:intron | 30.0% |
| ! | CGCATATTGGGTTTTTAAAT+CGG | + | chr8.1:10405843-10405862 | MS.gene58765:intron | 30.0% |
| ! | GATAATGGTAGAAAAATCAG+TGG | + | chr8.1:10405053-10405072 | MS.gene58765:intron | 30.0% |
| ! | GCATATTGGGTTTTTAAATC+GGG | + | chr8.1:10405844-10405863 | MS.gene58765:intron | 30.0% |
| ! | GGATATAGTCTTAAACAATG+TGG | + | chr8.1:10407261-10407280 | MS.gene58765:intron | 30.0% |
| ! | GTCCATATTTCCATTTTATG+TGG | + | chr8.1:10407511-10407530 | MS.gene58765:intron | 30.0% |
| ! | TGTTTTATAGGAGGAAGATA+AGG | + | chr8.1:10408405-10408424 | MS.gene58765:intron | 30.0% |
| !! | ACCTTATTTCCCTAATTTTG+TGG | + | chr8.1:10404922-10404941 | MS.gene58765:intron | 30.0% |
| !! | TTGTTTCCATTGTTTCTAGT+TGG | - | chr8.1:10406956-10406975 | None:intergenic | 30.0% |
| !!! | AATTTTTTCCATGCAACCAA+AGG | + | chr8.1:10407123-10407142 | MS.gene58765:intron | 30.0% |
| !!! | ATTTTTTATGATAGCAGTGC+AGG | + | chr8.1:10408700-10408719 | MS.gene58765:intron | 30.0% |
| !!! | TTTTTTGCTGAAACCTTCAT+GGG | + | chr8.1:10405317-10405336 | MS.gene58765:intron | 30.0% |
| AAACTCTTCAAGAACCATCA+TGG | + | chr8.1:10406913-10406932 | MS.gene58765:intron | 35.0% | |
| AATCACACTAAAAAGAGGAG+TGG | - | chr8.1:10406127-10406146 | None:intergenic | 35.0% | |
| AATTGGAAATATGGATCCCA+AGG | + | chr8.1:10404075-10404094 | MS.gene58765:CDS | 35.0% | |
| ACCACAGAAATGTACAATGA+TGG | - | chr8.1:10405416-10405435 | None:intergenic | 35.0% | |
| ACCTTAAGCTCCACAAAATT+AGG | - | chr8.1:10404935-10404954 | None:intergenic | 35.0% | |
| AGACTCACACATCTTAAATG+TGG | - | chr8.1:10404713-10404732 | None:intergenic | 35.0% | |
| ATAAAGTGATCAAGCTCCTT+GGG | - | chr8.1:10404094-10404113 | None:intergenic | 35.0% | |
| ATCACACTAAAAAGAGGAGT+GGG | - | chr8.1:10406126-10406145 | None:intergenic | 35.0% | |
| ATTATGAGCAGGTGTATCTT+CGG | + | chr8.1:10407967-10407986 | MS.gene58765:intron | 35.0% | |
| CACAGAAATGTACAATGATG+GGG | - | chr8.1:10405414-10405433 | None:intergenic | 35.0% | |
| CCACAGAAATGTACAATGAT+GGG | - | chr8.1:10405415-10405434 | None:intergenic | 35.0% | |
| CCTTAAGCTCCACAAAATTA+GGG | - | chr8.1:10404934-10404953 | None:intergenic | 35.0% | |
| GAATAGACTTAGACGCATAT+TGG | + | chr8.1:10405830-10405849 | MS.gene58765:intron | 35.0% | |
| GAATGACAACAATTGCGAAA+CGG | + | chr8.1:10403883-10403902 | MS.gene58765:CDS | 35.0% | |
| GTAAAGACTGCATTTGTCAA+GGG | - | chr8.1:10406737-10406756 | None:intergenic | 35.0% | |
| TAAACAATCCTTTGGTTGCA+TGG | - | chr8.1:10407134-10407153 | None:intergenic | 35.0% | |
| TAAAGACTGCATTTGTCAAG+GGG | - | chr8.1:10406736-10406755 | None:intergenic | 35.0% | |
| TAATCTTGTCCCACTTGTTT+AGG | + | chr8.1:10405273-10405292 | MS.gene58765:intron | 35.0% | |
| TAGTCACATCAATTGTGGTT+TGG | + | chr8.1:10406368-10406387 | MS.gene58765:intron | 35.0% | |
| TCAATCAAAGGAAAAGGAAC+TGG | + | chr8.1:10408482-10408501 | MS.gene58765:CDS | 35.0% | |
| TCAGTGAATCAGATTTGTCT+TGG | + | chr8.1:10405142-10405161 | MS.gene58765:intron | 35.0% | |
| TGAACTCAAACAAGGTTACA+AGG | + | chr8.1:10408165-10408184 | MS.gene58765:intron | 35.0% | |
| TGCTTATACTTTAGCTAGGA+TGG | + | chr8.1:10405972-10405991 | MS.gene58765:intron | 35.0% | |
| TGGTTGCTTATACTTTAGCT+AGG | + | chr8.1:10405968-10405987 | MS.gene58765:intron | 35.0% | |
| TTGAAGCATGAACTCAAACA+AGG | + | chr8.1:10408157-10408176 | MS.gene58765:CDS | 35.0% | |
| TTGTTGCAACTGTTCTTTGA+AGG | - | chr8.1:10406574-10406593 | None:intergenic | 35.0% | |
| TTTATGCTTCCACTAGAAAC+TGG | - | chr8.1:10407048-10407067 | None:intergenic | 35.0% | |
| TTTATTGAGGCACACTTAGT+TGG | - | chr8.1:10406454-10406473 | None:intergenic | 35.0% | |
| TTTCGCAATTGTTGTCATTC+CGG | - | chr8.1:10403883-10403902 | None:intergenic | 35.0% | |
| ! | TCAAATACTCCAGTTTCTAG+TGG | + | chr8.1:10407036-10407055 | MS.gene58765:intron | 35.0% |
| ! | TGATTAGTTGTATAGGGTGA+TGG | + | chr8.1:10406766-10406785 | MS.gene58765:intron | 35.0% |
| ! | TGTGGCTAGTTCCAATTTAA+GGG | + | chr8.1:10405167-10405186 | MS.gene58765:intron | 35.0% |
| ! | TTTTTGCTGAAACCTTCATG+GGG | + | chr8.1:10405318-10405337 | MS.gene58765:intron | 35.0% |
| !! | TGTACATCTTGGTATTGATG+TGG | + | chr8.1:10405459-10405478 | MS.gene58765:intron | 35.0% |
| !!! | CTTTTTTGCTGAAACCTTCA+TGG | + | chr8.1:10405316-10405335 | MS.gene58765:intron | 35.0% |
| AAAGACCTTTCAGTCTCTGT+GGG | - | chr8.1:10408115-10408134 | None:intergenic | 40.0% | |
| AACGCTAGGTTATACAACGA+AGG | + | chr8.1:10408043-10408062 | MS.gene58765:CDS | 40.0% | |
| AGAACACACACCTAAACAAG+TGG | - | chr8.1:10405286-10405305 | None:intergenic | 40.0% | |
| AGAGACTGAAAGGTCTTTGA+TGG | + | chr8.1:10408117-10408136 | MS.gene58765:CDS | 40.0% | |
| ATTCTACGAAAGAGAAGAGC+TGG | + | chr8.1:10408214-10408233 | MS.gene58765:CDS | 40.0% | |
| ATTGCCACCAAGCTTTCAAA+AGG | - | chr8.1:10408264-10408283 | None:intergenic | 40.0% | |
| CAAGGAGCTTGATCACTTTA+TGG | + | chr8.1:10404093-10404112 | MS.gene58765:CDS | 40.0% | |
| CATAAAGTGATCAAGCTCCT+TGG | - | chr8.1:10404095-10404114 | None:intergenic | 40.0% | |
| CCCATCATTGTACATTTCTG+TGG | + | chr8.1:10405412-10405431 | MS.gene58765:intron | 40.0% | |
| CGTAAAGACTGCATTTGTCA+AGG | - | chr8.1:10406738-10406757 | None:intergenic | 40.0% | |
| GAACACACACCTAAACAAGT+GGG | - | chr8.1:10405285-10405304 | None:intergenic | 40.0% | |
| GGTGGCAATCACATTCTAAA+TGG | + | chr8.1:10408275-10408294 | MS.gene58765:CDS | 40.0% | |
| TATGGTGCATCATTATGAGC+AGG | + | chr8.1:10407956-10407975 | MS.gene58765:intron | 40.0% | |
| TCAAAATCTGATCCCCATGA+AGG | - | chr8.1:10405333-10405352 | None:intergenic | 40.0% | |
| TCACATTCTCTTCACCATGA+TGG | - | chr8.1:10406930-10406949 | None:intergenic | 40.0% | |
| TGCGAAGACATCAACATGTA+GGG | + | chr8.1:10404656-10404675 | MS.gene58765:intron | 40.0% | |
| TGTTAGAAGACAAGCGAACA+TGG | + | chr8.1:10405948-10405967 | MS.gene58765:intron | 40.0% | |
| TTATGAGCAGGTGTATCTTC+GGG | + | chr8.1:10407968-10407987 | MS.gene58765:intron | 40.0% | |
| TTCTACGAAAGAGAAGAGCT+GGG | + | chr8.1:10408215-10408234 | MS.gene58765:CDS | 40.0% | |
| TTGCCACCAAGCTTTCAAAA+GGG | - | chr8.1:10408263-10408282 | None:intergenic | 40.0% | |
| ! | ATCAGATTTGTCTTGGTGTG+TGG | + | chr8.1:10405149-10405168 | MS.gene58765:intron | 40.0% |
| ! | CCCTAATTTTGTGGAGCTTA+AGG | + | chr8.1:10404931-10404950 | MS.gene58765:intron | 40.0% |
| ! | GTGTGGCTAGTTCCAATTTA+AGG | + | chr8.1:10405166-10405185 | MS.gene58765:intron | 40.0% |
| !! | AGTGTCTTAATTTGCCTCAC+TGG | + | chr8.1:10404337-10404356 | MS.gene58765:intron | 40.0% |
| !! | GGAGCTCTTTAAAACGTATG+AGG | + | chr8.1:10407226-10407245 | MS.gene58765:intron | 40.0% |
| !!! | TTTTGGAGCTACTAGAGGAT+GGG | - | chr8.1:10408519-10408538 | None:intergenic | 40.0% |
| AAGACCTTTCAGTCTCTGTG+GGG | - | chr8.1:10408114-10408133 | None:intergenic | 45.0% | |
| AGATAAGGCTAGATTGGTGC+AGG | + | chr8.1:10408420-10408439 | MS.gene58765:CDS | 45.0% | |
| AGCTAGGATGGTCTGTTCTT+GGG | + | chr8.1:10405984-10406003 | MS.gene58765:intron | 45.0% | |
| ATCCTTGGAAGCTGATCAAC+CGG | - | chr8.1:10404001-10404020 | None:intergenic | 45.0% | |
| CAAAGACCTTTCAGTCTCTG+TGG | - | chr8.1:10408116-10408135 | None:intergenic | 45.0% | |
| CAAAGAGGCAAAATCTGAGG+GGG | - | chr8.1:10407846-10407865 | None:intergenic | 45.0% | |
| CCAAGCTTTCAAAAGGGATG+TGG | - | chr8.1:10408257-10408276 | None:intergenic | 45.0% | |
| CGTATGAGGTCTATAGGTCT+AGG | + | chr8.1:10407240-10407259 | MS.gene58765:intron | 45.0% | |
| CTGCGAAGACATCAACATGT+AGG | + | chr8.1:10404655-10404674 | MS.gene58765:intron | 45.0% | |
| GATTGATGCTCAGCTTCAAC+AGG | + | chr8.1:10404018-10404037 | MS.gene58765:CDS | 45.0% | |
| GCGAAGACATCAACATGTAG+GGG | + | chr8.1:10404657-10404676 | MS.gene58765:intron | 45.0% | |
| GGAGGAAGATAAGGCTAGAT+TGG | + | chr8.1:10408414-10408433 | MS.gene58765:intron | 45.0% | |
| GGAGGCAGATAAACACATGA+GGG | + | chr8.1:10406263-10406282 | MS.gene58765:intron | 45.0% | |
| GGTCTTTGATGGAACGAGTT+AGG | + | chr8.1:10408128-10408147 | MS.gene58765:CDS | 45.0% | |
| TAGCTAGGATGGTCTGTTCT+TGG | + | chr8.1:10405983-10406002 | MS.gene58765:intron | 45.0% | |
| TGAAGCTGAGCATCAATCCT+TGG | - | chr8.1:10404016-10404035 | None:intergenic | 45.0% | |
| ! | TTTGGAGCTACTAGAGGATG+GGG | - | chr8.1:10408518-10408537 | None:intergenic | 45.0% |
| !! | CATCCCTTTTGAAAGCTTGG+TGG | + | chr8.1:10408257-10408276 | MS.gene58765:CDS | 45.0% |
| !! | CCACATCCCTTTTGAAAGCT+TGG | + | chr8.1:10408254-10408273 | MS.gene58765:CDS | 45.0% |
| !! | GTTGTATAGGGTGATGGAAG+TGG | + | chr8.1:10406772-10406791 | MS.gene58765:intron | 45.0% |
| !!! | CTTGGTTTTGGAGCTACTAG+AGG | - | chr8.1:10408524-10408543 | None:intergenic | 45.0% |
| !!! | GTTTTGGAGCTACTAGAGGA+TGG | - | chr8.1:10408520-10408539 | None:intergenic | 45.0% |
| AACGAAGGAAGCAGCCTTGA+TGG | + | chr8.1:10408058-10408077 | MS.gene58765:CDS | 50.0% | |
| ACATGTCCGTGTTCATGCCA+TGG | + | chr8.1:10406593-10406612 | MS.gene58765:CDS | 50.0% | |
| ATGGTACTACCTCTTGCGCT+TGG | - | chr8.1:10408542-10408561 | None:intergenic | 50.0% | |
| CAGTCTCTGCAAAGCTTGAC+AGG | + | chr8.1:10406645-10406664 | MS.gene58765:CDS | 50.0% | |
| CGCAATTGTTGTCATTCCGG+TGG | - | chr8.1:10403880-10403899 | None:intergenic | 50.0% | |
| CGGAGGCAGATAAACACATG+AGG | + | chr8.1:10406262-10406281 | MS.gene58765:intron | 50.0% | |
| GCTAGATTGGTGCAGGAAAC+AGG | + | chr8.1:10408427-10408446 | MS.gene58765:CDS | 50.0% | |
| GTATCTTCGGGTGAAGGAAC+AGG | + | chr8.1:10407980-10407999 | MS.gene58765:CDS | 50.0% | |
| GTCAGACGATGAAGATGAGC+AGG | + | chr8.1:10408012-10408031 | MS.gene58765:CDS | 50.0% | |
| GTGTCTCAGAATTGCGACAC+CGG | + | chr8.1:10403979-10403998 | MS.gene58765:CDS | 50.0% | |
| TAGTCCCCACAGAGACTGAA+AGG | + | chr8.1:10408107-10408126 | MS.gene58765:CDS | 50.0% | |
| ! | CTACCTCTTGCGCTTGGTTT+TGG | - | chr8.1:10408536-10408555 | None:intergenic | 50.0% |
| ! | GACAGCAGTACGAGGCATTT+GGG | + | chr8.1:10405103-10405122 | MS.gene58765:intron | 50.0% |
| ! | TTCTGATGGACAGCAGTACG+AGG | + | chr8.1:10405095-10405114 | MS.gene58765:intron | 50.0% |
| !! | CAAGAGTATCGACGCCATCA+AGG | - | chr8.1:10408075-10408094 | None:intergenic | 50.0% |
| !! | CTTGATGGCGTCGATACTCT+TGG | + | chr8.1:10408073-10408092 | MS.gene58765:CDS | 50.0% |
| AAAAGGGATGTGGTGTCCCC+AGG | - | chr8.1:10408247-10408266 | None:intergenic | 55.0% | |
| AAAGGGATGTGGTGTCCCCA+GGG | - | chr8.1:10408246-10408265 | None:intergenic | 55.0% | |
| AAGAGCTGGGAAACTCCCTG+GGG | + | chr8.1:10408228-10408247 | MS.gene58765:CDS | 55.0% | |
| ACAAGCCATCACTGCCTCCA+TGG | - | chr8.1:10406613-10406632 | None:intergenic | 55.0% | |
| AGAAGAGCTGGGAAACTCCC+TGG | + | chr8.1:10408226-10408245 | MS.gene58765:CDS | 55.0% | |
| AGCAGGCAGAGAGTAACGCT+AGG | + | chr8.1:10408029-10408048 | MS.gene58765:CDS | 55.0% | |
| CTGCCTCCATGGCATGAACA+CGG | - | chr8.1:10406602-10406621 | None:intergenic | 55.0% | |
| GAAAGCTTGGGAGTCCAGTG+AGG | - | chr8.1:10404354-10404373 | None:intergenic | 55.0% | |
| GAAGAGCTGGGAAACTCCCT+GGG | + | chr8.1:10408227-10408246 | MS.gene58765:CDS | 55.0% | |
| GAGGCAAAATCTGAGGGGGT+TGG | - | chr8.1:10407842-10407861 | None:intergenic | 55.0% | |
| GCAGGTGTATCTTCGGGTGA+AGG | + | chr8.1:10407974-10407993 | MS.gene58765:intron | 55.0% | |
| GCTCCAAAACCAAGCGCAAG+AGG | + | chr8.1:10408530-10408549 | MS.gene58765:CDS | 55.0% | |
| TCAGTCTCTGTGGGGACTAG+AGG | - | chr8.1:10408106-10408125 | None:intergenic | 55.0% | |
| TCATGCCATGGAGGCAGTGA+TGG | + | chr8.1:10406605-10406624 | MS.gene58765:CDS | 55.0% | |
| TGTCCGTGTTCATGCCATGG+AGG | + | chr8.1:10406596-10406615 | MS.gene58765:CDS | 55.0% | |
| ! | CACCGGTTGATCAGCTTCCA+AGG | + | chr8.1:10403996-10404015 | MS.gene58765:CDS | 55.0% |
| ! | GGACAGCAGTACGAGGCATT+TGG | + | chr8.1:10405102-10405121 | MS.gene58765:intron | 55.0% |
| ! | TGGAGGCAGTGATGGCTTGT+TGG | + | chr8.1:10406613-10406632 | MS.gene58765:CDS | 55.0% |
| !! | GGAGGCAGTGATGGCTTGTT+GGG | + | chr8.1:10406614-10406633 | MS.gene58765:CDS | 55.0% |
| !! | GGCGTCGATACTCTTGGCTT+TGG | + | chr8.1:10408079-10408098 | MS.gene58765:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 10403866 | 10408750 | 10403866 | ID=MS.gene58765 |
| chr8.1 | mRNA | 10403866 | 10408750 | 10403866 | ID=MS.gene58765.t1;Parent=MS.gene58765 |
| chr8.1 | exon | 10403866 | 10404114 | 10403866 | ID=MS.gene58765.t1.exon1;Parent=MS.gene58765.t1 |
| chr8.1 | CDS | 10403866 | 10404114 | 10403866 | ID=cds.MS.gene58765.t1;Parent=MS.gene58765.t1 |
| chr8.1 | exon | 10406546 | 10406666 | 10406546 | ID=MS.gene58765.t1.exon2;Parent=MS.gene58765.t1 |
| chr8.1 | CDS | 10406546 | 10406666 | 10406546 | ID=cds.MS.gene58765.t1;Parent=MS.gene58765.t1 |
| chr8.1 | exon | 10407978 | 10408178 | 10407978 | ID=MS.gene58765.t1.exon3;Parent=MS.gene58765.t1 |
| chr8.1 | CDS | 10407978 | 10408178 | 10407978 | ID=cds.MS.gene58765.t1;Parent=MS.gene58765.t1 |
| chr8.1 | exon | 10408209 | 10408309 | 10408209 | ID=MS.gene58765.t1.exon4;Parent=MS.gene58765.t1 |
| chr8.1 | CDS | 10408209 | 10408309 | 10408209 | ID=cds.MS.gene58765.t1;Parent=MS.gene58765.t1 |
| chr8.1 | exon | 10408415 | 10408551 | 10408415 | ID=MS.gene58765.t1.exon5;Parent=MS.gene58765.t1 |
| chr8.1 | CDS | 10408415 | 10408551 | 10408415 | ID=cds.MS.gene58765.t1;Parent=MS.gene58765.t1 |
| chr8.1 | exon | 10408714 | 10408750 | 10408714 | ID=MS.gene58765.t1.exon6;Parent=MS.gene58765.t1 |
| chr8.1 | CDS | 10408714 | 10408750 | 10408714 | ID=cds.MS.gene58765.t1;Parent=MS.gene58765.t1 |
| Gene Sequence |
| Protein sequence |
