Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59355.t1 | XP_003611976.1 | 95.5 | 470 | 15 | 1 | 1 | 464 | 1 | 470 | 9.60E-244 | 852.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59355.t1 | Q8L7A0 | 62.4 | 466 | 159 | 5 | 12 | 462 | 8 | 472 | 1.4e-155 | 550.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59355.t1 | G7ZW19 | 95.5 | 470 | 15 | 1 | 1 | 464 | 1 | 470 | 6.9e-244 | 852.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050815 | MS.gene59355 | 0.800372 | 1.49E-48 | -1.69E-46 |
| MS.gene051265 | MS.gene59355 | 0.810371 | 1.19E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene59355 | 0.830408 | 2.99E-55 | -1.69E-46 |
| MS.gene05288 | MS.gene59355 | 0.83811 | 3.49E-57 | -1.69E-46 |
| MS.gene05289 | MS.gene59355 | 0.817452 | 3.27E-52 | -1.69E-46 |
| MS.gene053074 | MS.gene59355 | 0.834532 | 2.84E-56 | -1.69E-46 |
| MS.gene053184 | MS.gene59355 | 0.809886 | 1.52E-50 | -1.69E-46 |
| MS.gene054433 | MS.gene59355 | 0.805745 | 1.15E-49 | -1.69E-46 |
| MS.gene054713 | MS.gene59355 | 0.888675 | 4.79E-73 | -1.69E-46 |
| MS.gene055356 | MS.gene59355 | 0.819585 | 1.08E-52 | -1.69E-46 |
| MS.gene055358 | MS.gene59355 | 0.81521 | 1.04E-51 | -1.69E-46 |
| MS.gene055608 | MS.gene59355 | 0.820371 | 7.11E-53 | -1.69E-46 |
| MS.gene055860 | MS.gene59355 | 0.850751 | 1.39E-60 | -1.69E-46 |
| MS.gene058042 | MS.gene59355 | 0.858381 | 8.57E-63 | -1.69E-46 |
| MS.gene058168 | MS.gene59355 | 0.816454 | 5.49E-52 | -1.69E-46 |
| MS.gene059124 | MS.gene59355 | 0.801496 | 8.76E-49 | -1.69E-46 |
| MS.gene059609 | MS.gene59355 | 0.800311 | 1.53E-48 | -1.69E-46 |
| MS.gene060137 | MS.gene59355 | -0.806586 | 7.66E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene59355 | 0.805392 | 1.37E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59355.t1 | MTR_5g019950 | 95.532 | 470 | 15 | 1 | 1 | 464 | 1 | 470 | 0.0 | 902 |
| MS.gene59355.t1 | MTR_8g077830 | 72.458 | 472 | 110 | 4 | 1 | 464 | 8 | 467 | 0.0 | 629 |
| MS.gene59355.t1 | MTR_3g109950 | 63.755 | 458 | 157 | 5 | 12 | 462 | 11 | 466 | 0.0 | 552 |
| MS.gene59355.t1 | MTR_3g109950 | 63.218 | 435 | 151 | 5 | 12 | 439 | 11 | 443 | 1.07e-179 | 511 |
| MS.gene59355.t1 | MTR_3g109950 | 61.697 | 389 | 140 | 5 | 12 | 393 | 11 | 397 | 6.96e-154 | 444 |
| MS.gene59355.t1 | MTR_8g088080 | 60.682 | 440 | 154 | 4 | 34 | 463 | 44 | 474 | 2.01e-153 | 444 |
| MS.gene59355.t1 | MTR_8g088070 | 59.028 | 432 | 156 | 4 | 41 | 462 | 48 | 468 | 1.69e-149 | 434 |
| MS.gene59355.t1 | MTR_1g026910 | 50.433 | 462 | 205 | 6 | 11 | 462 | 8 | 455 | 2.18e-143 | 418 |
| MS.gene59355.t1 | MTR_1g026910 | 49.886 | 439 | 196 | 6 | 11 | 439 | 8 | 432 | 9.56e-131 | 385 |
| MS.gene59355.t1 | MTR_7g103300 | 52.542 | 413 | 182 | 4 | 64 | 464 | 51 | 461 | 6.84e-127 | 376 |
| MS.gene59355.t1 | MTR_7g103300 | 52.696 | 408 | 179 | 4 | 69 | 464 | 8 | 413 | 2.50e-124 | 368 |
| MS.gene59355.t1 | MTR_7g103300 | 53.093 | 388 | 168 | 4 | 64 | 439 | 51 | 436 | 7.41e-117 | 350 |
| MS.gene59355.t1 | MTR_7g103300 | 51.475 | 373 | 167 | 4 | 104 | 464 | 1 | 371 | 1.95e-114 | 341 |
| MS.gene59355.t1 | MTR_7g103300 | 52.770 | 343 | 148 | 4 | 64 | 394 | 51 | 391 | 1.54e-99 | 304 |
| MS.gene59355.t1 | MTR_7g103300 | 51.613 | 310 | 136 | 4 | 64 | 361 | 51 | 358 | 1.29e-81 | 256 |
| MS.gene59355.t1 | MTR_1g061710 | 50.579 | 259 | 122 | 1 | 61 | 313 | 49 | 307 | 3.79e-76 | 248 |
| MS.gene59355.t1 | MTR_1g061710 | 54.369 | 103 | 47 | 0 | 361 | 463 | 427 | 529 | 5.82e-29 | 119 |
| MS.gene59355.t1 | MTR_5g019970 | 97.143 | 105 | 3 | 0 | 360 | 464 | 6 | 110 | 4.08e-66 | 207 |
| MS.gene59355.t1 | MTR_2g010740 | 28.351 | 388 | 244 | 9 | 101 | 462 | 87 | 466 | 1.57e-39 | 148 |
| MS.gene59355.t1 | MTR_2g010740 | 27.458 | 295 | 180 | 9 | 101 | 369 | 87 | 373 | 2.40e-25 | 107 |
| MS.gene59355.t1 | MTR_3g110012 | 47.458 | 118 | 40 | 1 | 297 | 392 | 27 | 144 | 4.82e-20 | 87.0 |
| MS.gene59355.t1 | MTR_3g109980 | 47.458 | 118 | 40 | 1 | 297 | 392 | 27 | 144 | 4.82e-20 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59355.t1 | AT2G25737 | 62.179 | 468 | 161 | 5 | 10 | 462 | 6 | 472 | 0.0 | 543 |
| MS.gene59355.t1 | AT2G25737 | 57.766 | 367 | 139 | 5 | 10 | 361 | 6 | 371 | 2.79e-132 | 387 |
| MS.gene59355.t1 | AT2G36630 | 50.835 | 419 | 192 | 3 | 58 | 464 | 42 | 458 | 3.52e-125 | 372 |
| MS.gene59355.t1 | AT1G11540 | 33.911 | 404 | 240 | 6 | 77 | 462 | 56 | 450 | 8.10e-49 | 173 |
| MS.gene59355.t1 | AT1G11540 | 33.511 | 376 | 223 | 6 | 105 | 462 | 1 | 367 | 1.42e-48 | 171 |
| MS.gene59355.t1 | AT1G61740 | 29.087 | 416 | 266 | 8 | 68 | 462 | 51 | 458 | 3.51e-42 | 155 |
| MS.gene59355.t1 | AT4G21250 | 30.788 | 419 | 245 | 7 | 69 | 462 | 51 | 449 | 3.78e-42 | 155 |
| MS.gene59355.t1 | AT4G21260 | 26.000 | 450 | 267 | 9 | 13 | 462 | 10 | 393 | 2.14e-33 | 130 |
Find 109 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAGGAGGTGGCTTCATTT+TGG | 0.160113 | 5.4:+12119279 | MS.gene59355:CDS |
| CTTTGCTGAAGAACATTTAT+TGG | 0.198775 | 5.4:+12118614 | MS.gene59355:CDS |
| TATCACTTCTTGTCTATGTT+TGG | 0.210505 | 5.4:+12118644 | MS.gene59355:CDS |
| GAGCAGTGGTTGATTTCTTA+TGG | 0.221654 | 5.4:+12116874 | MS.gene59355:CDS |
| GATAATTGCAGGTATGATTA+TGG | 0.245947 | 5.4:+12117379 | MS.gene59355:intron |
| CCTATGCTTGCTTTGATCAT+TGG | 0.246443 | 5.4:+12117169 | MS.gene59355:CDS |
| GTTGGAAAATCATGAGTATA+TGG | 0.251481 | 5.4:+12120589 | MS.gene59355:CDS |
| ATCACTTCTTGTCTATGTTT+GGG | 0.273401 | 5.4:+12118645 | MS.gene59355:CDS |
| AGGCATAAATACATGGAAAA+AGG | 0.303982 | 5.4:+12118008 | MS.gene59355:CDS |
| ACACATGGCAACAAAATCTT+TGG | 0.304038 | 5.4:+12116725 | None:intergenic |
| TGCAGCTTCATACTTTGTTT+TGG | 0.304145 | 5.4:+12120303 | MS.gene59355:intron |
| GGGGCCACTGTTTCTAGAAA+TGG | 0.317544 | 5.4:+12119300 | MS.gene59355:CDS |
| TTGGATTCTTAATTTCTTGC+AGG | 0.323072 | 5.4:+12118999 | MS.gene59355:CDS |
| AAAGGAAACAATGTTGAAAA+AGG | 0.328619 | 5.4:+12118026 | MS.gene59355:CDS |
| AGCAGGAAATGAAATTTGAT+TGG | 0.335221 | 5.4:+12117062 | MS.gene59355:intron |
| GCCACTTATAGATTATGATT+TGG | 0.337334 | 5.4:+12117460 | MS.gene59355:CDS |
| TTACTCATCATCTTATTCAT+AGG | 0.345297 | 5.4:+12117569 | MS.gene59355:CDS |
| AGAGAACATGATTGTGAAGT+TGG | 0.357557 | 5.4:+12120571 | MS.gene59355:CDS |
| TTCATAAGTGCAATCAGTTT+AGG | 0.367029 | 5.4:+12120427 | MS.gene59355:CDS |
| TCTTTCTCAACAAACTTTGC+CGG | 0.370188 | 5.4:-12116834 | None:intergenic |
| ATTTGATTGGAAAATTATAG+TGG | 0.373846 | 5.4:+12117075 | MS.gene59355:CDS |
| GTTGGAGGGTTGCTTGGTCT+AGG | 0.378397 | 5.4:+12119262 | MS.gene59355:CDS |
| GCAACCATAGCTGCATTTGC+TGG | 0.378940 | 5.4:+12120328 | MS.gene59355:CDS |
| GGTATGGTTGGAGGGTTGCT+TGG | 0.380908 | 5.4:+12119256 | MS.gene59355:CDS |
| TGTATTTCACCTGGACCCTT+TGG | 0.393240 | 5.4:-12118483 | None:intergenic |
| CAACTGTTTACTACAATATG+AGG | 0.399306 | 5.4:+12117414 | MS.gene59355:CDS |
| TTGGGAAGTGTTGGAGGTGT+AGG | 0.403654 | 5.4:+12117127 | MS.gene59355:CDS |
| GGGCCACTGTTTCTAGAAAT+GGG | 0.411280 | 5.4:+12119301 | MS.gene59355:CDS |
| CACAAACTTACACTTGGAAA+TGG | 0.417080 | 5.4:-12117215 | None:intergenic |
| ATAATTGCAGGTATGATTAT+GGG | 0.421533 | 5.4:+12117380 | MS.gene59355:intron |
| TGGTTCTTCTTCCAACTGCT+TGG | 0.423091 | 5.4:-12118142 | None:intergenic |
| AGCAGTGGTTGATTTCTTAT+GGG | 0.424588 | 5.4:+12116875 | MS.gene59355:CDS |
| ATGTGGAGTAATGGCTGGTA+TGG | 0.429546 | 5.4:+12119240 | MS.gene59355:CDS |
| AGACTTGCTCCATTGAGTAT+TGG | 0.430494 | 5.4:+12118980 | MS.gene59355:CDS |
| TCTAATTGTTCAGATTGTTA+AGG | 0.430792 | 5.4:+12118675 | MS.gene59355:CDS |
| TTCCAGCCTATGCTGATGCT+TGG | 0.432303 | 5.4:+12117491 | MS.gene59355:CDS |
| GGAGCAGCTTTGGGAAGTGT+TGG | 0.434741 | 5.4:+12117118 | MS.gene59355:CDS |
| GTAATGTCATGTTTGCTGAT+TGG | 0.440823 | 5.4:+12117534 | MS.gene59355:CDS |
| GATCGCTTCCCCGTACCTTA+CGG | 0.441861 | 5.4:+12120017 | MS.gene59355:CDS |
| ACTGTAACAGAGATAGCAAT+AGG | 0.442311 | 5.4:-12119118 | None:intergenic |
| TTCACCTGGACCCTTTGGTA+GGG | 0.442360 | 5.4:-12118478 | None:intergenic |
| GTTGATTTCTTATGGGAAAG+TGG | 0.442564 | 5.4:+12116882 | MS.gene59355:CDS |
| TTGGAAAATCATGAGTATAT+GGG | 0.442966 | 5.4:+12120590 | MS.gene59355:CDS |
| GTAATGGCTGGTATGGTTGG+AGG | 0.443896 | 5.4:+12119247 | MS.gene59355:CDS |
| GGGTTGCTTGGTCTAGGAGG+TGG | 0.445245 | 5.4:+12119268 | MS.gene59355:CDS |
| ATATTGCTATATTGTTTATG+TGG | 0.446750 | 5.4:+12119223 | MS.gene59355:CDS |
| AACTATTTACCGTAAGGTAC+GGG | 0.449928 | 5.4:-12120026 | None:intergenic |
| TAAGTGGCATGTCTAGTGTT+GGG | 0.453765 | 5.4:-12117445 | None:intergenic |
| AGTCTTCATATGAACCTGTT+TGG | 0.458365 | 5.4:+12116907 | MS.gene59355:CDS |
| GGAAGTGTTGGAGGTGTAGG+AGG | 0.462071 | 5.4:+12117130 | MS.gene59355:CDS |
| TTTCACCTGGACCCTTTGGT+AGG | 0.464163 | 5.4:-12118479 | None:intergenic |
| GTTGGAGGTGTAGGAGGTGG+TGG | 0.466176 | 5.4:+12117136 | MS.gene59355:CDS |
| TATGAACTCACAGGCCAAAC+AGG | 0.469346 | 5.4:-12116921 | None:intergenic |
| GGAGTAATGGCTGGTATGGT+TGG | 0.469457 | 5.4:+12119244 | MS.gene59355:CDS |
| TCACCTGGACCCTTTGGTAG+GGG | 0.471023 | 5.4:-12118477 | None:intergenic |
| AACAAGAGTGATTAAATCAA+AGG | 0.473487 | 5.4:+12119168 | MS.gene59355:CDS |
| TAATGGCTGGTATGGTTGGA+GGG | 0.480577 | 5.4:+12119248 | MS.gene59355:CDS |
| GCAGCTTTGGGAAGTGTTGG+AGG | 0.480835 | 5.4:+12117121 | MS.gene59355:CDS |
| TTTGTTGAGAAAGAAACAAA+AGG | 0.481024 | 5.4:+12116843 | MS.gene59355:CDS |
| ATTATAGTGGGATCAATCGT+TGG | 0.490378 | 5.4:+12117088 | MS.gene59355:CDS |
| AGTGTTGGAGGTGTAGGAGG+TGG | 0.493934 | 5.4:+12117133 | MS.gene59355:CDS |
| GGAAATGGCTGTAGAAGACT+TGG | 0.494754 | 5.4:-12117200 | None:intergenic |
| GCCAAATCATAATCTATAAG+TGG | 0.496380 | 5.4:-12117461 | None:intergenic |
| CAATAAATGTTCTTCAGCAA+AGG | 0.500289 | 5.4:-12118613 | None:intergenic |
| ATTAAGAATCCAATACTCAA+TGG | 0.501230 | 5.4:-12118989 | None:intergenic |
| ACAAGAGTGATTAAATCAAA+GGG | 0.507110 | 5.4:+12119169 | MS.gene59355:CDS |
| AACAATCTGAACAATTAGAA+AGG | 0.520405 | 5.4:-12118671 | None:intergenic |
| TTCCAAGCATCAGCATAGGC+TGG | 0.520792 | 5.4:-12117493 | None:intergenic |
| CTGATGCTTGGAATAAGTAT+TGG | 0.521464 | 5.4:+12117503 | MS.gene59355:CDS |
| AGAAGGATAATTGCAATCCT+TGG | 0.524746 | 5.4:+12120364 | MS.gene59355:CDS |
| TTGTGTATCACAGGTGGAGT+AGG | 0.524929 | 5.4:+12120545 | MS.gene59355:intron |
| ACTTCTTGTCTATGTTTGGG+TGG | 0.527940 | 5.4:+12118648 | MS.gene59355:CDS |
| ACTGATTGCACTTATGAAGA+TGG | 0.531468 | 5.4:-12120422 | None:intergenic |
| CTGGCCAGCAAATGCAGCTA+TGG | 0.531946 | 5.4:-12120332 | None:intergenic |
| ATAAGTGGCATGTCTAGTGT+TGG | 0.532797 | 5.4:-12117446 | None:intergenic |
| TTTGATTGGAAAATTATAGT+GGG | 0.535494 | 5.4:+12117076 | MS.gene59355:CDS |
| ACTTCATCTTGTATTTCACC+TGG | 0.537361 | 5.4:-12118492 | None:intergenic |
| GGAGGGTTGCTTGGTCTAGG+AGG | 0.540261 | 5.4:+12119265 | MS.gene59355:CDS |
| ATATTGTTTATGTGGAGTAA+TGG | 0.540286 | 5.4:+12119231 | MS.gene59355:CDS |
| AAACTATTTACCGTAAGGTA+CGG | 0.540610 | 5.4:-12120027 | None:intergenic |
| GACTACAAGCCCCTACCAAA+GGG | 0.543521 | 5.4:+12118468 | MS.gene59355:CDS |
| GCAGGAAGCAGCCAAGCAGT+TGG | 0.548673 | 5.4:+12118131 | MS.gene59355:intron |
| TGCATTTGCTGGCCAGCATG+TGG | 0.549794 | 5.4:+12120339 | MS.gene59355:CDS |
| TATTCAAAGGCATAAATACA+TGG | 0.555159 | 5.4:+12118001 | MS.gene59355:CDS |
| TGGAAAATCATGAGTATATG+GGG | 0.558196 | 5.4:+12120591 | MS.gene59355:CDS |
| TGTCATGTTTGCTGATTGGA+TGG | 0.558982 | 5.4:+12117538 | MS.gene59355:CDS |
| AAGCCCCTACCAAAGGGTCC+AGG | 0.559115 | 5.4:+12118474 | MS.gene59355:CDS |
| CCAATGATCAAAGCAAGCAT+AGG | 0.560848 | 5.4:-12117169 | None:intergenic |
| AGTGATTAAATCAAAGGGAA+AGG | 0.562365 | 5.4:+12119174 | MS.gene59355:CDS |
| TTATCCTTCTCACCACATGC+TGG | 0.565982 | 5.4:-12120351 | None:intergenic |
| CAATGATCAAAGCAAGCATA+GGG | 0.568436 | 5.4:-12117168 | None:intergenic |
| GATCATGTGTATCCTTGTTG+TGG | 0.572672 | 5.4:+12116767 | MS.gene59355:CDS |
| AGGTGAAATACAAGATGAAG+TGG | 0.578510 | 5.4:+12118494 | MS.gene59355:CDS |
| TCAACAAAAGCATTATTCAA+AGG | 0.585877 | 5.4:+12117988 | MS.gene59355:CDS |
| TGTTTATGTGGAGTAATGGC+TGG | 0.586217 | 5.4:+12119235 | MS.gene59355:CDS |
| AGAAATGGGAATTCCTCCGC+AGG | 0.587719 | 5.4:+12119315 | MS.gene59355:CDS |
| AGACTACAAGCCCCTACCAA+AGG | 0.602171 | 5.4:+12118467 | MS.gene59355:CDS |
| AAAAGGATTTCTAAGAGCAG+TGG | 0.604558 | 5.4:+12116860 | MS.gene59355:CDS |
| CTGGCCAGCATGTGGTGAGA+AGG | 0.606592 | 5.4:+12120347 | MS.gene59355:CDS |
| CTTATTCCAAGCATCAGCAT+AGG | 0.609800 | 5.4:-12117497 | None:intergenic |
| CTTTGGTTACTGCAGCAACA+TGG | 0.613177 | 5.4:+12116742 | MS.gene59355:CDS |
| GAAGCTGTATGCATATACAA+AGG | 0.625248 | 5.4:+12119145 | MS.gene59355:CDS |
| TAATAATTGATGCACGACCA+AGG | 0.625797 | 5.4:-12120381 | None:intergenic |
| ATATTGCACTACCGACATAG+AGG | 0.629199 | 5.4:-12119985 | None:intergenic |
| ATTCCCATTTCTAGAAACAG+TGG | 0.643732 | 5.4:-12119304 | None:intergenic |
| GAAATGGCTGTAGAAGACTT+GGG | 0.659724 | 5.4:-12117199 | None:intergenic |
| ACTATTTACCGTAAGGTACG+GGG | 0.686757 | 5.4:-12120025 | None:intergenic |
| TGACATTGCAGACCACAACA+AGG | 0.687899 | 5.4:-12116779 | None:intergenic |
| ATATGAGAGTGTACCTGCGG+AGG | 0.696121 | 5.4:-12119328 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAAAAAATTTAAAAAA+TGG | - | chr5.4:12118926-12118945 | None:intergenic | 0.0% |
| !! | AAAACTTTCAAAATTTATAA+AGG | + | chr5.4:12119836-12119855 | MS.gene59355:intron | 10.0% |
| !! | ATTTAAAGATTTAAAAATAC+AGG | - | chr5.4:12119659-12119678 | None:intergenic | 10.0% |
| !! | CAAATTATGAAAAAATAATT+AGG | - | chr5.4:12119687-12119706 | None:intergenic | 10.0% |
| !! | TTTAAAGATTTAAAAATACA+GGG | - | chr5.4:12119658-12119677 | None:intergenic | 10.0% |
| !!! | CTAATTATTTTTTCATAATT+TGG | + | chr5.4:12119685-12119704 | MS.gene59355:intron | 10.0% |
| !!! | TTTTTTTTCTTTTAGATATA+AGG | - | chr5.4:12117690-12117709 | None:intergenic | 10.0% |
| !! | GTTAACATGAAATAATTAAT+TGG | + | chr5.4:12117954-12117973 | MS.gene59355:intron | 15.0% |
| !! | TGAAATAATTAATTGGTTAT+AGG | + | chr5.4:12117961-12117980 | MS.gene59355:intron | 15.0% |
| !! | TTAAAGATTTAAAAATACAG+GGG | - | chr5.4:12119657-12119676 | None:intergenic | 15.0% |
| !!! | AATGAGAAATTTTAAAGTTT+TGG | - | chr5.4:12119778-12119797 | None:intergenic | 15.0% |
| !!! | AATTTTAATATTTCATCGTT+TGG | + | chr5.4:12119425-12119444 | MS.gene59355:intron | 15.0% |
| !!! | ATTATGCATTAATTTTCATA+TGG | + | chr5.4:12116946-12116965 | MS.gene59355:intron | 15.0% |
| !!! | CTTTGAAATATAATTATTTG+AGG | + | chr5.4:12120507-12120526 | MS.gene59355:intron | 15.0% |
| !!! | TACTTTCTATGATTTTTAAT+TGG | + | chr5.4:12120450-12120469 | MS.gene59355:intron | 15.0% |
| !!! | TTAGTTTTTGAATTATCTAA+TGG | + | chr5.4:12119071-12119090 | MS.gene59355:intron | 15.0% |
| !!! | TTTTAACATTATCTCTTATT+AGG | - | chr5.4:12120185-12120204 | None:intergenic | 15.0% |
| !! | ACAAATTTGGTATTAGAATT+TGG | - | chr5.4:12119914-12119933 | None:intergenic | 20.0% |
| !! | AGAAAAAAAATGATCGAAAA+TGG | + | chr5.4:12117700-12117719 | MS.gene59355:intron | 20.0% |
| !! | ATATTGCTATATTGTTTATG+TGG | + | chr5.4:12119223-12119242 | MS.gene59355:CDS | 20.0% |
| !! | ATTTCGAATCCTTAATTTAT+AGG | - | chr5.4:12119536-12119555 | None:intergenic | 20.0% |
| !! | ATTTGATTGGAAAATTATAG+TGG | + | chr5.4:12117075-12117094 | MS.gene59355:CDS | 20.0% |
| !! | CTAAATTGTTAATCACAAAT+TGG | + | chr5.4:12119569-12119588 | MS.gene59355:intron | 20.0% |
| !! | GAATCAACTTCAAAAAATTT+AGG | - | chr5.4:12118069-12118088 | None:intergenic | 20.0% |
| !! | TAAATACCACCTATAAATTA+AGG | + | chr5.4:12119524-12119543 | MS.gene59355:intron | 20.0% |
| !! | TAAGTTCCAACAATAAATAT+TGG | - | chr5.4:12118398-12118417 | None:intergenic | 20.0% |
| !! | TATTAATCAAGAATATAAGC+AGG | - | chr5.4:12117339-12117358 | None:intergenic | 20.0% |
| !! | TTTGATTGGAAAATTATAGT+GGG | + | chr5.4:12117076-12117095 | MS.gene59355:CDS | 20.0% |
| !!! | AAATTGTCAACACTAATTTT+AGG | + | chr5.4:12119495-12119514 | MS.gene59355:intron | 20.0% |
| !!! | AATTGTCAACACTAATTTTA+GGG | + | chr5.4:12119496-12119515 | MS.gene59355:intron | 20.0% |
| !!! | ATTGTAAAACTTGTTACTAT+TGG | + | chr5.4:12120252-12120271 | MS.gene59355:intron | 20.0% |
| !!! | ATTTTTCCGTTTTTTCAAAT+TGG | + | chr5.4:12119631-12119650 | MS.gene59355:intron | 20.0% |
| !!! | CTTCAAGTTATAACAATTAT+TGG | + | chr5.4:12118429-12118448 | MS.gene59355:intron | 20.0% |
| !!! | GTGTTTTTAATTTGCTTATA+AGG | - | chr5.4:12118184-12118203 | None:intergenic | 20.0% |
| !!! | TATTATGCTTTTTTATCGAT+AGG | + | chr5.4:12117244-12117263 | MS.gene59355:intron | 20.0% |
| !!! | TTTCTTTTAGATATAAGGTT+CGG | - | chr5.4:12117685-12117704 | None:intergenic | 20.0% |
| ! | AAACTAATTAAACATGTGCT+TGG | - | chr5.4:12119058-12119077 | None:intergenic | 25.0% |
| ! | AAAGGAAACAATGTTGAAAA+AGG | + | chr5.4:12118026-12118045 | MS.gene59355:CDS | 25.0% |
| ! | AACAAGAGTGATTAAATCAA+AGG | + | chr5.4:12119168-12119187 | MS.gene59355:CDS | 25.0% |
| ! | AACAATCTGAACAATTAGAA+AGG | - | chr5.4:12118674-12118693 | None:intergenic | 25.0% |
| ! | AACACTTGTAACTACTAATT+TGG | - | chr5.4:12117635-12117654 | None:intergenic | 25.0% |
| ! | AAGCAAATTAAAAACACCTT+AGG | + | chr5.4:12118187-12118206 | MS.gene59355:intron | 25.0% |
| ! | ACAAGAGTGATTAAATCAAA+GGG | + | chr5.4:12119169-12119188 | MS.gene59355:CDS | 25.0% |
| ! | ACATCTCCAATATTTATTGT+TGG | + | chr5.4:12118389-12118408 | MS.gene59355:intron | 25.0% |
| ! | ATAAATTCTTTGATACGCAT+CGG | + | chr5.4:12118353-12118372 | MS.gene59355:intron | 25.0% |
| ! | ATAATTGCAGGTATGATTAT+GGG | + | chr5.4:12117380-12117399 | MS.gene59355:intron | 25.0% |
| ! | ATATTGTTTATGTGGAGTAA+TGG | + | chr5.4:12119231-12119250 | MS.gene59355:CDS | 25.0% |
| ! | ATTAAGAATCCAATACTCAA+TGG | - | chr5.4:12118992-12119011 | None:intergenic | 25.0% |
| ! | CTGAAATGCATTATATTTAC+TGG | + | chr5.4:12117032-12117051 | MS.gene59355:intron | 25.0% |
| ! | GTTCTAATAAAGATTCTTTG+AGG | + | chr5.4:12118752-12118771 | MS.gene59355:intron | 25.0% |
| ! | TCAAAAAATTTAGGTGTCTA+AGG | - | chr5.4:12118060-12118079 | None:intergenic | 25.0% |
| ! | TCTAATTGTTCAGATTGTTA+AGG | + | chr5.4:12118675-12118694 | MS.gene59355:CDS | 25.0% |
| ! | TTACTCATCATCTTATTCAT+AGG | + | chr5.4:12117569-12117588 | MS.gene59355:CDS | 25.0% |
| ! | TTGGAAAATCATGAGTATAT+GGG | + | chr5.4:12120590-12120609 | MS.gene59355:CDS | 25.0% |
| ! | TTGTAGTTTCAAAAAGTTGA+GGG | - | chr5.4:12119748-12119767 | None:intergenic | 25.0% |
| ! | TTTGTAGTTTCAAAAAGTTG+AGG | - | chr5.4:12119749-12119768 | None:intergenic | 25.0% |
| ! | TTTGTTGAGAAAGAAACAAA+AGG | + | chr5.4:12116843-12116862 | MS.gene59355:CDS | 25.0% |
| !! | AATAAAGATTCTTTGAGGAA+AGG | + | chr5.4:12118757-12118776 | MS.gene59355:intron | 25.0% |
| !! | ATAAAGATTCTTTGAGGAAA+GGG | + | chr5.4:12118758-12118777 | MS.gene59355:intron | 25.0% |
| !! | ATTGTCAACACTAATTTTAG+GGG | + | chr5.4:12119497-12119516 | MS.gene59355:intron | 25.0% |
| !! | CTGTTTGATCTTTTATCTAA+CGG | + | chr5.4:12117835-12117854 | MS.gene59355:intron | 25.0% |
| !! | TATTCAAAGGCATAAATACA+TGG | + | chr5.4:12118001-12118020 | MS.gene59355:CDS | 25.0% |
| !!! | AACTGTTTTGTTATGTGTTT+TGG | + | chr5.4:12116975-12116994 | MS.gene59355:intron | 25.0% |
| !!! | AGTTTTGAAAGAAAAAGAAC+CGG | + | chr5.4:12116815-12116834 | MS.gene59355:CDS | 25.0% |
| !!! | ATCTTTGATTTGATAATTGC+AGG | + | chr5.4:12117368-12117387 | MS.gene59355:intron | 25.0% |
| !!! | TCAACAAAAGCATTATTCAA+AGG | + | chr5.4:12117988-12118007 | MS.gene59355:CDS | 25.0% |
| !!! | TGTTATGTGTTTTGGTTAAT+TGG | + | chr5.4:12116983-12117002 | MS.gene59355:intron | 25.0% |
| AAACTATTTACCGTAAGGTA+CGG | - | chr5.4:12120030-12120049 | None:intergenic | 30.0% | |
| AATACAAGATGAAGTGGTAA+TGG | + | chr5.4:12118500-12118519 | MS.gene59355:intron | 30.0% | |
| AATTAAACATGTGCTTGGTA+AGG | - | chr5.4:12119053-12119072 | None:intergenic | 30.0% | |
| AGCAGGAAATGAAATTTGAT+TGG | + | chr5.4:12117062-12117081 | MS.gene59355:intron | 30.0% | |
| AGCTAAAATAAGTTGTAAGC+TGG | + | chr5.4:12118327-12118346 | MS.gene59355:intron | 30.0% | |
| AGGCATAAATACATGGAAAA+AGG | + | chr5.4:12118008-12118027 | MS.gene59355:CDS | 30.0% | |
| AGGGAAAGGAAGTTAAAAAT+TGG | + | chr5.4:12119188-12119207 | MS.gene59355:CDS | 30.0% | |
| AGTGATAACCTATTATGGTT+TGG | + | chr5.4:12117908-12117927 | MS.gene59355:intron | 30.0% | |
| AGTGATTAAATCAAAGGGAA+AGG | + | chr5.4:12119174-12119193 | MS.gene59355:CDS | 30.0% | |
| ATCACTTCTTGTCTATGTTT+GGG | + | chr5.4:12118645-12118664 | MS.gene59355:CDS | 30.0% | |
| CAACTGTTTACTACAATATG+AGG | + | chr5.4:12117414-12117433 | MS.gene59355:CDS | 30.0% | |
| CAATAAATGTTCTTCAGCAA+AGG | - | chr5.4:12118616-12118635 | None:intergenic | 30.0% | |
| CCATCAATAACGAATTGTTA+AGG | - | chr5.4:12118833-12118852 | None:intergenic | 30.0% | |
| CCTTAACAATTCGTTATTGA+TGG | + | chr5.4:12118830-12118849 | MS.gene59355:intron | 30.0% | |
| CTTTGCTGAAGAACATTTAT+TGG | + | chr5.4:12118614-12118633 | MS.gene59355:CDS | 30.0% | |
| GATAATTGCAGGTATGATTA+TGG | + | chr5.4:12117379-12117398 | MS.gene59355:intron | 30.0% | |
| GATGAAGTGATAACCTATTA+TGG | + | chr5.4:12117903-12117922 | MS.gene59355:intron | 30.0% | |
| GATGTCAAATTAACATCAAG+AGG | - | chr5.4:12120228-12120247 | None:intergenic | 30.0% | |
| GCCAAATCATAATCTATAAG+TGG | - | chr5.4:12117464-12117483 | None:intergenic | 30.0% | |
| GCCACTTATAGATTATGATT+TGG | + | chr5.4:12117460-12117479 | MS.gene59355:CDS | 30.0% | |
| GTTGGAAAATCATGAGTATA+TGG | + | chr5.4:12120589-12120608 | MS.gene59355:CDS | 30.0% | |
| TAGATAAGCCAAACCATAAT+AGG | - | chr5.4:12117919-12117938 | None:intergenic | 30.0% | |
| TAGTAGTTACAAGTGTTTGA+CGG | + | chr5.4:12117638-12117657 | MS.gene59355:intron | 30.0% | |
| TATCACTTCTTGTCTATGTT+TGG | + | chr5.4:12118644-12118663 | MS.gene59355:CDS | 30.0% | |
| TCGAATCCTTAATTTATAGG+TGG | - | chr5.4:12119533-12119552 | None:intergenic | 30.0% | |
| TCTGCATAGTAACACATAAA+AGG | - | chr5.4:12118951-12118970 | None:intergenic | 30.0% | |
| TGAGTTTCATCACTTTAAGT+AGG | + | chr5.4:12120123-12120142 | MS.gene59355:intron | 30.0% | |
| TGGAAAATCATGAGTATATG+GGG | + | chr5.4:12120591-12120610 | MS.gene59355:CDS | 30.0% | |
| TGGCTTATCTATTATTGTGT+TGG | + | chr5.4:12117928-12117947 | MS.gene59355:intron | 30.0% | |
| TGTAGTTTCAAAAAGTTGAG+GGG | - | chr5.4:12119747-12119766 | None:intergenic | 30.0% | |
| TTATAATAAACTGAGCGATC+AGG | - | chr5.4:12118875-12118894 | None:intergenic | 30.0% | |
| TTCATAAGTGCAATCAGTTT+AGG | + | chr5.4:12120427-12120446 | MS.gene59355:CDS | 30.0% | |
| TTGGATTCTTAATTTCTTGC+AGG | + | chr5.4:12118999-12119018 | MS.gene59355:CDS | 30.0% | |
| ! | GCATATGATTTTCCAATTCT+AGG | + | chr5.4:12119093-12119112 | MS.gene59355:intron | 30.0% |
| ! | TAAAGATTCTTTGAGGAAAG+GGG | + | chr5.4:12118759-12118778 | MS.gene59355:intron | 30.0% |
| ! | TGTTAGATTCTTTGAGGAAA+GGG | + | chr5.4:12118729-12118748 | MS.gene59355:intron | 30.0% |
| ! | TTCTTTCTTTTGTGTATCAC+AGG | + | chr5.4:12120536-12120555 | MS.gene59355:intron | 30.0% |
| !!! | ATTTCCTGGAGTTTTATTCT+CGG | + | chr5.4:12117739-12117758 | MS.gene59355:intron | 30.0% |
| AACTATTTACCGTAAGGTAC+GGG | - | chr5.4:12120029-12120048 | None:intergenic | 35.0% | |
| AATGTATCACTTATCCATGC+AGG | + | chr5.4:12118588-12118607 | MS.gene59355:intron | 35.0% | |
| AATTTCATTTCCTGCTCAAC+AGG | - | chr5.4:12117058-12117077 | None:intergenic | 35.0% | |
| ACCTGCATAGAGAACAAATT+TGG | - | chr5.4:12119927-12119946 | None:intergenic | 35.0% | |
| ACTGATTGCACTTATGAAGA+TGG | - | chr5.4:12120425-12120444 | None:intergenic | 35.0% | |
| ACTGTAACAGAGATAGCAAT+AGG | - | chr5.4:12119121-12119140 | None:intergenic | 35.0% | |
| ACTTCATCTTGTATTTCACC+TGG | - | chr5.4:12118495-12118514 | None:intergenic | 35.0% | |
| AGAAGGATAATTGCAATCCT+TGG | + | chr5.4:12120364-12120383 | MS.gene59355:CDS | 35.0% | |
| AGAGAACATGATTGTGAAGT+TGG | + | chr5.4:12120571-12120590 | MS.gene59355:CDS | 35.0% | |
| AGGTGAAATACAAGATGAAG+TGG | + | chr5.4:12118494-12118513 | MS.gene59355:CDS | 35.0% | |
| AGTCTTCATATGAACCTGTT+TGG | + | chr5.4:12116907-12116926 | MS.gene59355:CDS | 35.0% | |
| CAATGATCAAAGCAAGCATA+GGG | - | chr5.4:12117171-12117190 | None:intergenic | 35.0% | |
| CACAAACTTACACTTGGAAA+TGG | - | chr5.4:12117218-12117237 | None:intergenic | 35.0% | |
| CATAGAGGATGAAAAAAGCA+TGG | - | chr5.4:12119973-12119992 | None:intergenic | 35.0% | |
| CCAGAAAACTATTTACCGTA+AGG | - | chr5.4:12120035-12120054 | None:intergenic | 35.0% | |
| CCTTAGGAAAATAGAGTGAA+AGG | + | chr5.4:12118203-12118222 | MS.gene59355:intron | 35.0% | |
| CGTTTGTGTTAGATTCTTTG+AGG | + | chr5.4:12118723-12118742 | MS.gene59355:intron | 35.0% | |
| CTGATGCTTGGAATAAGTAT+TGG | + | chr5.4:12117503-12117522 | MS.gene59355:CDS | 35.0% | |
| GAAGCTGTATGCATATACAA+AGG | + | chr5.4:12119145-12119164 | MS.gene59355:CDS | 35.0% | |
| GCATAATGTTATGAACTCAC+AGG | - | chr5.4:12116933-12116952 | None:intergenic | 35.0% | |
| TAATAATTGATGCACGACCA+AGG | - | chr5.4:12120384-12120403 | None:intergenic | 35.0% | |
| TACACACACAAACTTACACT+TGG | - | chr5.4:12117224-12117243 | None:intergenic | 35.0% | |
| TACTAATTTGGCGATATCAC+TGG | - | chr5.4:12117623-12117642 | None:intergenic | 35.0% | |
| TAGCAATAGGAACCTAGAAT+TGG | - | chr5.4:12119108-12119127 | None:intergenic | 35.0% | |
| TCAGTCTAAAAATCGAACTC+AGG | + | chr5.4:12118803-12118822 | MS.gene59355:intron | 35.0% | |
| TCTCATATCTCTTGTGTGTT+TGG | + | chr5.4:12119343-12119362 | MS.gene59355:intron | 35.0% | |
| TCTTTCTCAACAAACTTTGC+CGG | - | chr5.4:12116837-12116856 | None:intergenic | 35.0% | |
| TTGGAAGAAGAACCAAAAAC+TGG | + | chr5.4:12118150-12118169 | MS.gene59355:CDS | 35.0% | |
| ! | AAAAGGATTTCTAAGAGCAG+TGG | + | chr5.4:12116860-12116879 | MS.gene59355:CDS | 35.0% |
| ! | ACCAAATTTGTTCTCTATGC+AGG | + | chr5.4:12119923-12119942 | MS.gene59355:intron | 35.0% |
| ! | AGCAGTGGTTGATTTCTTAT+GGG | + | chr5.4:12116875-12116894 | MS.gene59355:CDS | 35.0% |
| ! | AGTGTGAGTGTTGTAAATTC+TGG | - | chr5.4:12117287-12117306 | None:intergenic | 35.0% |
| ! | ATTATAGTGGGATCAATCGT+TGG | + | chr5.4:12117088-12117107 | MS.gene59355:CDS | 35.0% |
| ! | ATTCCCATTTCTAGAAACAG+TGG | - | chr5.4:12119307-12119326 | None:intergenic | 35.0% |
| ! | CCTTACGGTAAATAGTTTTC+TGG | + | chr5.4:12120032-12120051 | MS.gene59355:intron | 35.0% |
| ! | CCTTTCACTCTATTTTCCTA+AGG | - | chr5.4:12118206-12118225 | None:intergenic | 35.0% |
| ! | GGATCAATCGTTGGATTTTT+GGG | + | chr5.4:12117097-12117116 | MS.gene59355:CDS | 35.0% |
| ! | GTAATGTCATGTTTGCTGAT+TGG | + | chr5.4:12117534-12117553 | MS.gene59355:CDS | 35.0% |
| ! | GTGTTAGATTCTTTGAGGAA+AGG | + | chr5.4:12118728-12118747 | MS.gene59355:intron | 35.0% |
| ! | GTTAGATTCTTTGAGGAAAG+GGG | + | chr5.4:12118730-12118749 | MS.gene59355:intron | 35.0% |
| ! | GTTGATTTCTTATGGGAAAG+TGG | + | chr5.4:12116882-12116901 | MS.gene59355:CDS | 35.0% |
| ! | TTTCTTTTGTGTATCACAGG+TGG | + | chr5.4:12120539-12120558 | MS.gene59355:intron | 35.0% |
| !! | TGCAGCTTCATACTTTGTTT+TGG | + | chr5.4:12120303-12120322 | MS.gene59355:intron | 35.0% |
| !!! | CTCATAGAACTCTAGCTTTT+GGG | + | chr5.4:12119870-12119889 | MS.gene59355:intron | 35.0% |
| !!! | GCTTTTTTCATCCTCTATGT+CGG | + | chr5.4:12119974-12119993 | MS.gene59355:CDS | 35.0% |
| !!! | TCATAGAACTCTAGCTTTTG+GGG | + | chr5.4:12119871-12119890 | MS.gene59355:intron | 35.0% |
| AATTTGGCGATATCACTGGT+CGG | - | chr5.4:12117619-12117638 | None:intergenic | 40.0% | |
| ACTATTTACCGTAAGGTACG+GGG | - | chr5.4:12120028-12120047 | None:intergenic | 40.0% | |
| ACTTCTTGTCTATGTTTGGG+TGG | + | chr5.4:12118648-12118667 | MS.gene59355:CDS | 40.0% | |
| AGTAGCTTTCTTATCACCAG+AGG | - | chr5.4:12118104-12118123 | None:intergenic | 40.0% | |
| ATAAGTGGCATGTCTAGTGT+TGG | - | chr5.4:12117449-12117468 | None:intergenic | 40.0% | |
| ATATTGCACTACCGACATAG+AGG | - | chr5.4:12119988-12120007 | None:intergenic | 40.0% | |
| ATTCTCATTCCTTCATCCTC+TGG | + | chr5.4:12118085-12118104 | MS.gene59355:intron | 40.0% | |
| CAGGGGCCAATTTGAAAAAA+CGG | - | chr5.4:12119640-12119659 | None:intergenic | 40.0% | |
| CCAAAAGCTAGAGTTCTATG+AGG | - | chr5.4:12119872-12119891 | None:intergenic | 40.0% | |
| CCAATGATCAAAGCAAGCAT+AGG | - | chr5.4:12117172-12117191 | None:intergenic | 40.0% | |
| CCTATGCTTGCTTTGATCAT+TGG | + | chr5.4:12117169-12117188 | MS.gene59355:CDS | 40.0% | |
| CTTATTCCAAGCATCAGCAT+AGG | - | chr5.4:12117500-12117519 | None:intergenic | 40.0% | |
| GAAATGGCTGTAGAAGACTT+GGG | - | chr5.4:12117202-12117221 | None:intergenic | 40.0% | |
| GAAGAAGAACCAAAAACTGG+TGG | + | chr5.4:12118153-12118172 | MS.gene59355:CDS | 40.0% | |
| GATCATGTGTATCCTTGTTG+TGG | + | chr5.4:12116767-12116786 | MS.gene59355:CDS | 40.0% | |
| GGTTGTGAGCTAATTGAGTT+AGG | + | chr5.4:12117659-12117678 | MS.gene59355:intron | 40.0% | |
| TAAGTGGCATGTCTAGTGTT+GGG | - | chr5.4:12117448-12117467 | None:intergenic | 40.0% | |
| TGTTTATGTGGAGTAATGGC+TGG | + | chr5.4:12119235-12119254 | MS.gene59355:CDS | 40.0% | |
| TTCTTATCACCAGAGGATGA+AGG | - | chr5.4:12118097-12118116 | None:intergenic | 40.0% | |
| ! | AAGGACTTACCACCAGTTTT+TGG | - | chr5.4:12118165-12118184 | None:intergenic | 40.0% |
| ! | AGAAAGCTACTTTGACATGC+AGG | + | chr5.4:12118113-12118132 | MS.gene59355:intron | 40.0% |
| ! | AGACTTGCTCCATTGAGTAT+TGG | + | chr5.4:12118980-12118999 | MS.gene59355:CDS | 40.0% |
| ! | AGCGTGCTGTTAAAATTTCC+TGG | + | chr5.4:12117725-12117744 | MS.gene59355:intron | 40.0% |
| ! | GAGCAGTGGTTGATTTCTTA+TGG | + | chr5.4:12116874-12116893 | MS.gene59355:CDS | 40.0% |
| ! | GGGATCAATCGTTGGATTTT+TGG | + | chr5.4:12117096-12117115 | MS.gene59355:CDS | 40.0% |
| ! | TGTCATGTTTGCTGATTGGA+TGG | + | chr5.4:12117538-12117557 | MS.gene59355:CDS | 40.0% |
| !! | TAACATCAAGAGGAGTGTCA+TGG | - | chr5.4:12120218-12120237 | None:intergenic | 40.0% |
| !!! | CCTCATAGAACTCTAGCTTT+TGG | + | chr5.4:12119869-12119888 | MS.gene59355:intron | 40.0% |
| ACGACCGAGAATAAAACTCC+AGG | - | chr5.4:12117746-12117765 | None:intergenic | 45.0% | |
| ATGTGGAGTAATGGCTGGTA+TGG | + | chr5.4:12119240-12119259 | MS.gene59355:CDS | 45.0% | |
| CTTTGGTTACTGCAGCAACA+TGG | + | chr5.4:12116742-12116761 | MS.gene59355:CDS | 45.0% | |
| GCAGGACTAACGCAATTAGT+TGG | - | chr5.4:12117321-12117340 | None:intergenic | 45.0% | |
| GGAAATGGCTGTAGAAGACT+TGG | - | chr5.4:12117203-12117222 | None:intergenic | 45.0% | |
| TAATGGCTGGTATGGTTGGA+GGG | + | chr5.4:12119248-12119267 | MS.gene59355:CDS | 45.0% | |
| TATGAACTCACAGGCCAAAC+AGG | - | chr5.4:12116924-12116943 | None:intergenic | 45.0% | |
| TGACATTGCAGACCACAACA+AGG | - | chr5.4:12116782-12116801 | None:intergenic | 45.0% | |
| TGGTTCTTCTTCCAACTGCT+TGG | - | chr5.4:12118145-12118164 | None:intergenic | 45.0% | |
| TGTATTTCACCTGGACCCTT+TGG | - | chr5.4:12118486-12118505 | None:intergenic | 45.0% | |
| TTATCCTTCTCACCACATGC+TGG | - | chr5.4:12120354-12120373 | None:intergenic | 45.0% | |
| TTGTGTATCACAGGTGGAGT+AGG | + | chr5.4:12120545-12120564 | MS.gene59355:intron | 45.0% | |
| ! | CTAGGAGGTGGCTTCATTTT+GGG | + | chr5.4:12119280-12119299 | MS.gene59355:CDS | 45.0% |
| ! | GAGATATGAGAGTGTACCTG+CGG | - | chr5.4:12119334-12119353 | None:intergenic | 45.0% |
| ! | TAGGAGGTGGCTTCATTTTG+GGG | + | chr5.4:12119281-12119300 | MS.gene59355:CDS | 45.0% |
| ! | TATTTACTGGCCTGTTGAGC+AGG | + | chr5.4:12117045-12117064 | MS.gene59355:intron | 45.0% |
| ! | TCTAGGAGGTGGCTTCATTT+TGG | + | chr5.4:12119279-12119298 | MS.gene59355:CDS | 45.0% |
| !! | GGATTTTTGGGAGCAGCTTT+GGG | + | chr5.4:12117109-12117128 | MS.gene59355:CDS | 45.0% |
| !! | GGGCCACTGTTTCTAGAAAT+GGG | + | chr5.4:12119301-12119320 | MS.gene59355:CDS | 45.0% |
| !! | TGGATTTTTGGGAGCAGCTT+TGG | + | chr5.4:12117108-12117127 | MS.gene59355:CDS | 45.0% |
| !! | AAATTATGAAAAAATAATTA+GGG | - | chr5.4:12119686-12119705 | None:intergenic | 5.0% |
| !!! | CTTTAAATTTTTAAAATTTA+AGG | - | chr5.4:12119719-12119738 | None:intergenic | 5.0% |
| AGAAATGGGAATTCCTCCGC+AGG | + | chr5.4:12119315-12119334 | MS.gene59355:CDS | 50.0% | |
| AGACTACAAGCCCCTACCAA+AGG | + | chr5.4:12118467-12118486 | MS.gene59355:CDS | 50.0% | |
| CGTTGATCTAGATCGACTGC+AGG | - | chr5.4:12117875-12117894 | None:intergenic | 50.0% | |
| GACTACAAGCCCCTACCAAA+GGG | + | chr5.4:12118468-12118487 | MS.gene59355:CDS | 50.0% | |
| GCAACCATAGCTGCATTTGC+TGG | + | chr5.4:12120328-12120347 | MS.gene59355:CDS | 50.0% | |
| GGAGTAATGGCTGGTATGGT+TGG | + | chr5.4:12119244-12119263 | MS.gene59355:CDS | 50.0% | |
| GTAATGGCTGGTATGGTTGG+AGG | + | chr5.4:12119247-12119266 | MS.gene59355:CDS | 50.0% | |
| TTCACCTGGACCCTTTGGTA+GGG | - | chr5.4:12118481-12118500 | None:intergenic | 50.0% | |
| TTCCAAGCATCAGCATAGGC+TGG | - | chr5.4:12117496-12117515 | None:intergenic | 50.0% | |
| TTCCAGCCTATGCTGATGCT+TGG | + | chr5.4:12117491-12117510 | MS.gene59355:CDS | 50.0% | |
| TTTCACCTGGACCCTTTGGT+AGG | - | chr5.4:12118482-12118501 | None:intergenic | 50.0% | |
| ! | ATATGAGAGTGTACCTGCGG+AGG | - | chr5.4:12119331-12119350 | None:intergenic | 50.0% |
| !! | GGGGCCACTGTTTCTAGAAA+TGG | + | chr5.4:12119300-12119319 | MS.gene59355:CDS | 50.0% |
| !! | TTGGGAAGTGTTGGAGGTGT+AGG | + | chr5.4:12117127-12117146 | MS.gene59355:CDS | 50.0% |
| ACTGAGCGATCAGGCTCAAG+TGG | - | chr5.4:12118866-12118885 | None:intergenic | 55.0% | |
| CTGGCCAGCAAATGCAGCTA+TGG | - | chr5.4:12120335-12120354 | None:intergenic | 55.0% | |
| GATCGCTTCCCCGTACCTTA+CGG | + | chr5.4:12120017-12120036 | MS.gene59355:CDS | 55.0% | |
| GGTATGGTTGGAGGGTTGCT+TGG | + | chr5.4:12119256-12119275 | MS.gene59355:CDS | 55.0% | |
| GTTGGAGGGTTGCTTGGTCT+AGG | + | chr5.4:12119262-12119281 | MS.gene59355:CDS | 55.0% | |
| TCACCTGGACCCTTTGGTAG+GGG | - | chr5.4:12118480-12118499 | None:intergenic | 55.0% | |
| ! | AGTGTTGGAGGTGTAGGAGG+TGG | + | chr5.4:12117133-12117152 | MS.gene59355:CDS | 55.0% |
| ! | TGCATTTGCTGGCCAGCATG+TGG | + | chr5.4:12120339-12120358 | MS.gene59355:CDS | 55.0% |
| !! | CTTCAGCAAAGGCACCTGCA+TGG | - | chr5.4:12118605-12118624 | None:intergenic | 55.0% |
| !! | GCAGCTTTGGGAAGTGTTGG+AGG | + | chr5.4:12117121-12117140 | MS.gene59355:CDS | 55.0% |
| !! | GGAAGTGTTGGAGGTGTAGG+AGG | + | chr5.4:12117130-12117149 | MS.gene59355:CDS | 55.0% |
| !! | GGAGCAGCTTTGGGAAGTGT+TGG | + | chr5.4:12117118-12117137 | MS.gene59355:CDS | 55.0% |
| AAGCCCCTACCAAAGGGTCC+AGG | + | chr5.4:12118474-12118493 | MS.gene59355:CDS | 60.0% | |
| CTGGCCAGCATGTGGTGAGA+AGG | + | chr5.4:12120347-12120366 | MS.gene59355:CDS | 60.0% | |
| GCAGGAAGCAGCCAAGCAGT+TGG | + | chr5.4:12118131-12118150 | MS.gene59355:intron | 60.0% | |
| GGAGGGTTGCTTGGTCTAGG+AGG | + | chr5.4:12119265-12119284 | MS.gene59355:CDS | 60.0% | |
| GGGTTGCTTGGTCTAGGAGG+TGG | + | chr5.4:12119268-12119287 | MS.gene59355:CDS | 60.0% | |
| ! | GTTGGAGGTGTAGGAGGTGG+TGG | + | chr5.4:12117136-12117155 | MS.gene59355:CDS | 60.0% |
| GGCGATATCACTGGTCGGCG+TGG | - | chr5.4:12117614-12117633 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 12116729 | 12120637 | 12116729 | ID=MS.gene59355 |
| chr5.4 | mRNA | 12116729 | 12120637 | 12116729 | ID=MS.gene59355.t1;Parent=MS.gene59355 |
| chr5.4 | exon | 12116729 | 12116932 | 12116729 | ID=MS.gene59355.t1.exon1;Parent=MS.gene59355.t1 |
| chr5.4 | CDS | 12116729 | 12116932 | 12116729 | ID=cds.MS.gene59355.t1;Parent=MS.gene59355.t1 |
| chr5.4 | exon | 12117067 | 12117226 | 12117067 | ID=MS.gene59355.t1.exon2;Parent=MS.gene59355.t1 |
| chr5.4 | CDS | 12117067 | 12117226 | 12117067 | ID=cds.MS.gene59355.t1;Parent=MS.gene59355.t1 |
| chr5.4 | exon | 12117390 | 12117590 | 12117390 | ID=MS.gene59355.t1.exon3;Parent=MS.gene59355.t1 |
| chr5.4 | CDS | 12117390 | 12117590 | 12117390 | ID=cds.MS.gene59355.t1;Parent=MS.gene59355.t1 |
| chr5.4 | exon | 12117983 | 12118047 | 12117983 | ID=MS.gene59355.t1.exon4;Parent=MS.gene59355.t1 |
| chr5.4 | CDS | 12117983 | 12118047 | 12117983 | ID=cds.MS.gene59355.t1;Parent=MS.gene59355.t1 |
| chr5.4 | exon | 12118135 | 12118174 | 12118135 | ID=MS.gene59355.t1.exon5;Parent=MS.gene59355.t1 |
| chr5.4 | CDS | 12118135 | 12118174 | 12118135 | ID=cds.MS.gene59355.t1;Parent=MS.gene59355.t1 |
| chr5.4 | exon | 12118466 | 12118515 | 12118466 | ID=MS.gene59355.t1.exon6;Parent=MS.gene59355.t1 |
| chr5.4 | CDS | 12118466 | 12118515 | 12118466 | ID=cds.MS.gene59355.t1;Parent=MS.gene59355.t1 |
| chr5.4 | exon | 12118610 | 12118696 | 12118610 | ID=MS.gene59355.t1.exon7;Parent=MS.gene59355.t1 |
| chr5.4 | CDS | 12118610 | 12118696 | 12118610 | ID=cds.MS.gene59355.t1;Parent=MS.gene59355.t1 |
| chr5.4 | exon | 12118970 | 12119020 | 12118970 | ID=MS.gene59355.t1.exon8;Parent=MS.gene59355.t1 |
| chr5.4 | CDS | 12118970 | 12119020 | 12118970 | ID=cds.MS.gene59355.t1;Parent=MS.gene59355.t1 |
| chr5.4 | exon | 12119115 | 12119336 | 12119115 | ID=MS.gene59355.t1.exon9;Parent=MS.gene59355.t1 |
| chr5.4 | CDS | 12119115 | 12119336 | 12119115 | ID=cds.MS.gene59355.t1;Parent=MS.gene59355.t1 |
| chr5.4 | exon | 12119945 | 12120038 | 12119945 | ID=MS.gene59355.t1.exon10;Parent=MS.gene59355.t1 |
| chr5.4 | CDS | 12119945 | 12120038 | 12119945 | ID=cds.MS.gene59355.t1;Parent=MS.gene59355.t1 |
| chr5.4 | exon | 12120308 | 12120448 | 12120308 | ID=MS.gene59355.t1.exon11;Parent=MS.gene59355.t1 |
| chr5.4 | CDS | 12120308 | 12120448 | 12120308 | ID=cds.MS.gene59355.t1;Parent=MS.gene59355.t1 |
| chr5.4 | exon | 12120558 | 12120637 | 12120558 | ID=MS.gene59355.t1.exon12;Parent=MS.gene59355.t1 |
| chr5.4 | CDS | 12120558 | 12120637 | 12120558 | ID=cds.MS.gene59355.t1;Parent=MS.gene59355.t1 |
| Gene Sequence |
| Protein sequence |
