AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene60271


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60271.t1 MTR_1g012370 95.929 565 20 1 1 565 16 577 0.0 1135
MS.gene60271.t1 MTR_1g012370 97.059 476 14 0 90 565 1 476 0.0 971
MS.gene60271.t1 MTR_1g012370 97.130 453 13 0 113 565 1 453 0.0 927
MS.gene60271.t1 MTR_4g129950 28.661 478 221 16 33 506 67 428 2.11e-45 168
MS.gene60271.t1 MTR_4g129950 28.000 425 186 16 33 453 67 375 2.84e-33 132
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60271.t1 AT2G25530 62.105 570 206 5 1 565 64 628 0.0 734
MS.gene60271.t1 AT2G25530 60.291 481 181 5 1 476 64 539 0.0 595
MS.gene60271.t1 AT4G28070 31.402 328 170 9 179 506 134 406 4.58e-42 158
MS.gene60271.t1 AT4G30490 30.473 338 176 10 172 506 154 435 5.83e-42 158
MS.gene60271.t1 AT4G28070 30.793 328 163 10 179 506 134 397 3.26e-37 144

Find 128 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAAACCTTCTTTCTAATT+TGG 0.118749 1.1:+8722212 MS.gene60271:CDS
GCAACTCCCTCGCAGCTTTC+AGG 0.157546 1.1:-8723729 None:intergenic
GTTAGGTTAATCTATCTAAT+TGG 0.161961 1.1:+8719562 MS.gene60271:intron
TGGATCCAGGGGTAGGAAAA+TGG 0.233069 1.1:+8719974 MS.gene60271:CDS
TTTGCTATTGTGGCTTTATC+TGG 0.250196 1.1:+8721884 MS.gene60271:CDS
CCCAAAGGACTTTACATATA+TGG 0.303298 1.1:+8720066 MS.gene60271:CDS
GCCATATATGTAAAGTCCTT+TGG 0.312948 1.1:-8720067 None:intergenic
CCAAATTAGAAAGAAGGTTT+TGG 0.313607 1.1:-8722212 None:intergenic
CAGGATGCAACAGGCAGATT+TGG 0.318576 1.1:+8723586 MS.gene60271:CDS
GCTCTGTAGCAACAGTTTCT+TGG 0.326843 1.1:-8719391 None:intergenic
TTGATGGTTTCCCTTTCAAT+AGG 0.346062 1.1:-8723544 None:intergenic
GGCATCACATCCATGCTATC+TGG 0.356166 1.1:+8727254 MS.gene60271:CDS
TTGAGATTGGAAATGTGAAT+TGG 0.363751 1.1:-8718515 None:intergenic
TTAGGTTAATCTATCTAATT+GGG 0.371026 1.1:+8719563 MS.gene60271:intron
CGGGAGTTGGAGGTTGAGAT+TGG 0.374547 1.1:-8718528 None:intergenic
AGCATGGATGTGATGCCAAC+AGG 0.383757 1.1:-8727248 None:intergenic
AGCTTCAGAATTTGTTATCA+AGG 0.390844 1.1:+8719411 MS.gene60271:CDS
TCAGAATTTGTTATCAAGGT+TGG 0.392889 1.1:+8719415 MS.gene60271:CDS
GGATCAAGAAGGAGAAGAAA+AGG 0.396933 1.1:+8721312 MS.gene60271:CDS
TCCTTAGCTTTAGTGTCAAA+TGG 0.397452 1.1:-8721208 None:intergenic
TCAATTGATGAATTATTTCA+AGG 0.400199 1.1:+8724853 MS.gene60271:CDS
CGGAATTACGCGGGAGTTGG+AGG 0.404984 1.1:-8718538 None:intergenic
AAACAATGAGAAGAAGAATC+TGG 0.405934 1.1:+8718463 None:intergenic
CCATATATGTAAAGTCCTTT+GGG 0.406905 1.1:-8720066 None:intergenic
TGAGCGCCGAAGGATTCTTA+TGG 0.409862 1.1:+8719602 MS.gene60271:CDS
TTTGTGCTTTGATGAGATAC+AGG 0.410864 1.1:+8721345 MS.gene60271:CDS
GATCTTCCAAATTAGAAAGA+AGG 0.414619 1.1:-8722218 None:intergenic
TCATTCTTGTCTATGTTGCT+TGG 0.415282 1.1:+8724822 MS.gene60271:CDS
TGATGGTTTCCCTTTCAATA+GGG 0.415283 1.1:-8723543 None:intergenic
CACACCTCATTCAAGTCCTT+TGG 0.415615 1.1:-8721965 None:intergenic
TCTTAAACGTGAGAAGAAGT+TGG 0.425289 1.1:+8720005 MS.gene60271:CDS
TAGCACAAAGATCAGAAAAC+CGG 0.431848 1.1:+8722289 MS.gene60271:CDS
CTTCAGCCTCTGTTTCAAAC+TGG 0.432094 1.1:-8727169 None:intergenic
AAGAAGTTGGATTCAGTAGT+TGG 0.438282 1.1:+8720018 MS.gene60271:CDS
CACATCCATGCTATCTGGTC+AGG 0.454613 1.1:+8727259 MS.gene60271:CDS
ACTATTTATGCCCTATTGAA+AGG 0.454914 1.1:+8723533 MS.gene60271:CDS
GGAGAATTATGAGAGAGAAA+TGG 0.457162 1.1:+8719436 MS.gene60271:CDS
CTATTTATGCCCTATTGAAA+GGG 0.458438 1.1:+8723534 MS.gene60271:CDS
AACACCATTTCAGTGATGTT+CGG 0.464460 1.1:+8723625 MS.gene60271:CDS
TGTTGATGTATTTGCTATTG+TGG 0.467315 1.1:+8721874 MS.gene60271:CDS
GAAGAGAAGCCTTTGCAGTC+AGG 0.468263 1.1:+8721160 MS.gene60271:CDS
AGACCGGAGAATGTGGATCC+AGG 0.470251 1.1:+8719961 MS.gene60271:CDS
CCTTCCGAACATCACTGAAA+TGG 0.470791 1.1:-8723629 None:intergenic
GGGATGAACCTGGACGGTTA+TGG 0.470890 1.1:-8718599 None:intergenic
GGATCCAGGGGTAGGAAAAT+GGG 0.471492 1.1:+8719975 MS.gene60271:CDS
ACCCCTGGATCCACATTCTC+CGG 0.477592 1.1:-8719964 None:intergenic
CGAATGCGCATGCTCATCAC+TGG 0.477595 1.1:-8724513 None:intergenic
ATGTAAAGTCCTTTGGGAGC+TGG 0.488973 1.1:-8720060 None:intergenic
GTAGCAACAGTTTCTTGGTA+AGG 0.490928 1.1:-8719386 None:intergenic
GCAGAAGGCAACGTGGGCTC+AGG 0.491325 1.1:+8727218 MS.gene60271:CDS
TGACTATCTATGTGGTCGTC+CGG 0.499564 1.1:+8723764 MS.gene60271:CDS
AAACGGAATTACGCGGGAGT+TGG 0.500568 1.1:-8718541 None:intergenic
CAAGACATGGAAGAAACAAA+TGG 0.504054 1.1:+8721138 MS.gene60271:CDS
CTTCCTCCATAAGAATCCTT+CGG 0.505769 1.1:-8719608 None:intergenic
TTGGGAGCTGGAGGAGCAGT+TGG 0.506316 1.1:-8720048 None:intergenic
AGCAGCAGAATGACAAGGAT+TGG 0.507679 1.1:+8719637 MS.gene60271:CDS
GATGCAACAGGCAGATTTGG+AGG 0.510110 1.1:+8723589 MS.gene60271:CDS
TCCATTTGACACTAAAGCTA+AGG 0.519936 1.1:+8721207 MS.gene60271:CDS
ATAATAAAATCACTGAAAGA+TGG 0.521637 1.1:+8719673 MS.gene60271:CDS
GGCTCAGGAGGTACCCCTGT+TGG 0.522358 1.1:+8727233 MS.gene60271:CDS
TAGATAGTCAAATGTAAAGC+GGG 0.527142 1.1:-8723751 None:intergenic
CTTTGGTGCTCGATTACTTG+TGG 0.529817 1.1:-8721948 None:intergenic
TGGAATATCAGATATGAAAA+CGG 0.530816 1.1:-8724493 None:intergenic
TTTACATTTGACTATCTATG+TGG 0.531968 1.1:+8723756 MS.gene60271:CDS
CAGTTTGAAACAGAGGCTGA+AGG 0.533189 1.1:+8727170 MS.gene60271:CDS
GACCGGAGAATGTGGATCCA+GGG 0.536182 1.1:+8719962 MS.gene60271:CDS
CAGTTTCCAGTTTGAAACAG+AGG 0.543306 1.1:+8727163 MS.gene60271:intron
ATGTTCATTTATTCTCAGCA+TGG 0.544311 1.1:-8721110 None:intergenic
CAGGAAAAGACCGGAGAATG+TGG 0.546258 1.1:+8719954 MS.gene60271:intron
CTGAAAGATGGACAAACTCT+AGG 0.548929 1.1:+8719685 MS.gene60271:CDS
CTAAGCAGATTGCTGAGTAG+TGG 0.551063 1.1:+8721911 MS.gene60271:CDS
AGAAGAAAGATACAAGAAAG+AGG 0.556135 1.1:+8721243 MS.gene60271:CDS
GTCTTAGCAGAAGGCAACGT+GGG 0.556790 1.1:+8727212 MS.gene60271:CDS
CTCTTCCTGACCAGATAGCA+TGG 0.558079 1.1:-8727264 None:intergenic
CGCCGCGATGTCTTAGCAGA+AGG 0.558774 1.1:+8727203 MS.gene60271:CDS
GAACATCACTGAAATGGTGT+TGG 0.561502 1.1:-8723623 None:intergenic
CATTGTGAGAAGGTGTTGGT+AGG 0.563706 1.1:+8722240 MS.gene60271:CDS
GCATGGATGTGATGCCAACA+GGG 0.567016 1.1:-8727247 None:intergenic
ATGAACATATGCACAAGACA+TGG 0.570304 1.1:+8721125 MS.gene60271:CDS
TGCAGTCAGGCATTGCAAGT+TGG 0.571546 1.1:+8721173 MS.gene60271:CDS
CTTGCAATGCCTGACTGCAA+AGG 0.573619 1.1:-8721169 None:intergenic
ATATATGGCAATGTGGGCAG+TGG 0.574246 1.1:+8720081 MS.gene60271:CDS
GAGGTTCCTGAAAGCTGCGA+GGG 0.575011 1.1:+8723723 MS.gene60271:CDS
GAATAGTTAAACATCGAAGA+AGG 0.576214 1.1:+8720889 MS.gene60271:CDS
CTTTACATATATGGCAATGT+GGG 0.576308 1.1:+8720075 MS.gene60271:CDS
CACAAGTAATCGAGCACCAA+AGG 0.577196 1.1:+8721949 MS.gene60271:CDS
GATCAAGAAGGAGAAGAAAA+GGG 0.580502 1.1:+8721313 MS.gene60271:CDS
TTGAAACAGAGGCTGAAGGC+GGG 0.583908 1.1:+8727174 MS.gene60271:CDS
AGCAGAATGACAAGGATTGG+TGG 0.584067 1.1:+8719640 MS.gene60271:CDS
GAAGGCAACGTGGGCTCAGG+AGG 0.585167 1.1:+8727221 MS.gene60271:CDS
ATAGGGAGAATGAGCGCCGA+AGG 0.589964 1.1:+8719592 MS.gene60271:CDS
GAGCATGCGCATTCGTGACA+AGG 0.591327 1.1:+8724521 MS.gene60271:CDS
CCATTTCAGTGATGTTCGGA+AGG 0.596470 1.1:+8723629 MS.gene60271:CDS
ATTCTCAACCATAACCGTCC+AGG 0.597324 1.1:+8718591 MS.gene60271:CDS
TTTGGAAGATCATTGTGAGA+AGG 0.598544 1.1:+8722230 MS.gene60271:CDS
TTATTTCAAGGAACTGAGGA+GGG 0.603288 1.1:+8724865 MS.gene60271:CDS
AGATCATTGTGAGAAGGTGT+TGG 0.604039 1.1:+8722236 MS.gene60271:CDS
GAGCTGGAGGAGCAGTTGGA+CGG 0.604604 1.1:-8720044 None:intergenic
TGAATTATTTCAAGGAACTG+AGG 0.605246 1.1:+8724861 MS.gene60271:CDS
GAGAATGTGGATCCAGGGGT+AGG 0.610398 1.1:+8719967 MS.gene60271:CDS
AGCACAAAGATCAGAAAACC+GGG 0.611413 1.1:+8722290 MS.gene60271:CDS
ACTTTACATATATGGCAATG+TGG 0.612571 1.1:+8720074 MS.gene60271:CDS
TTAATGACTCAGGAAAAGAC+CGG 0.613019 1.1:+8719945 MS.gene60271:intron
GTTGAGAATGCGTGATGGAT+CGG 0.613329 1.1:-8718577 None:intergenic
TAAAGTCCTTTGGGAGCTGG+AGG 0.619516 1.1:-8720057 None:intergenic
AGCACCAAAGGACTTGAATG+AGG 0.623626 1.1:+8721961 MS.gene60271:CDS
ATTATTTCAAGGAACTGAGG+AGG 0.624203 1.1:+8724864 MS.gene60271:CDS
ACTGCTCCTCCAGCTCCCAA+AGG 0.628639 1.1:+8720051 MS.gene60271:CDS
TGAAGGGAAAACAATGCTGA+TGG 0.640075 1.1:+8720842 MS.gene60271:intron
TTTGAAACAGAGGCTGAAGG+CGG 0.640142 1.1:+8727173 MS.gene60271:CDS
ACCGGAGAATGTGGATCCAG+GGG 0.642420 1.1:+8719963 MS.gene60271:CDS
GCGCCGAAGGATTCTTATGG+AGG 0.644834 1.1:+8719605 MS.gene60271:CDS
ATCTTTGTGCTATAAAACGA+CGG 0.647255 1.1:-8722278 None:intergenic
ATAGATAGTCAAATGTAAAG+CGG 0.650519 1.1:-8723752 None:intergenic
TGAGGTTCCTGAAAGCTGCG+AGG 0.652315 1.1:+8723722 MS.gene60271:CDS
TTGACACTAAAGCTAAGGAG+TGG 0.655831 1.1:+8721212 MS.gene60271:CDS
TCGGTGCAGTAAGAACGAAA+CGG 0.666018 1.1:-8718558 None:intergenic
AAGAACGAAACGGAATTACG+CGG 0.672121 1.1:-8718548 None:intergenic
AGAACGAAACGGAATTACGC+GGG 0.675655 1.1:-8718547 None:intergenic
TTATGGTTGAGAATGCGTGA+TGG 0.680934 1.1:-8718582 None:intergenic
AGAAGAGGGATGAACCTGGA+CGG 0.682270 1.1:-8718605 None:intergenic
AAGAAGGTATCACTTTCATG+AGG 0.691776 1.1:+8720905 MS.gene60271:CDS
TGAGAAGCAGCAGAATGACA+AGG 0.697083 1.1:+8719632 MS.gene60271:CDS
GAGTAGTGGAACTATTATTG+TGG 0.703738 1.1:+8721925 MS.gene60271:CDS
TGTCTTAGCAGAAGGCAACG+TGG 0.706451 1.1:+8727211 MS.gene60271:CDS
CAACTACAGTACTTGCAGTG+AGG 0.708174 1.1:-8727405 None:intergenic
CATGGATGTGATGCCAACAG+GGG 0.725758 1.1:-8727246 None:intergenic
TGCCTTCTGCTAAGACATCG+CGG 0.763605 1.1:-8727205 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.1 gene 8718468 8727450 8718468 ID=MS.gene60271
chr1.1 mRNA 8718468 8727450 8718468 ID=MS.gene60271.t1;Parent=MS.gene60271
chr1.1 exon 8718468 8718612 8718468 ID=MS.gene60271.t1.exon1;Parent=MS.gene60271.t1
chr1.1 CDS 8718468 8718612 8718468 ID=cds.MS.gene60271.t1;Parent=MS.gene60271.t1
chr1.1 exon 8719333 8719469 8719333 ID=MS.gene60271.t1.exon2;Parent=MS.gene60271.t1
chr1.1 CDS 8719333 8719469 8719333 ID=cds.MS.gene60271.t1;Parent=MS.gene60271.t1
chr1.1 exon 8719567 8719706 8719567 ID=MS.gene60271.t1.exon3;Parent=MS.gene60271.t1
chr1.1 CDS 8719567 8719706 8719567 ID=cds.MS.gene60271.t1;Parent=MS.gene60271.t1
chr1.1 exon 8719957 8720102 8719957 ID=MS.gene60271.t1.exon4;Parent=MS.gene60271.t1
chr1.1 CDS 8719957 8720102 8719957 ID=cds.MS.gene60271.t1;Parent=MS.gene60271.t1
chr1.1 exon 8720847 8720926 8720847 ID=MS.gene60271.t1.exon5;Parent=MS.gene60271.t1
chr1.1 CDS 8720847 8720926 8720847 ID=cds.MS.gene60271.t1;Parent=MS.gene60271.t1
chr1.1 exon 8721109 8721366 8721109 ID=MS.gene60271.t1.exon6;Parent=MS.gene60271.t1
chr1.1 CDS 8721109 8721366 8721109 ID=cds.MS.gene60271.t1;Parent=MS.gene60271.t1
chr1.1 exon 8721872 8721982 8721872 ID=MS.gene60271.t1.exon7;Parent=MS.gene60271.t1
chr1.1 CDS 8721872 8721982 8721872 ID=cds.MS.gene60271.t1;Parent=MS.gene60271.t1
chr1.1 exon 8722189 8722311 8722189 ID=MS.gene60271.t1.exon8;Parent=MS.gene60271.t1
chr1.1 CDS 8722189 8722311 8722189 ID=cds.MS.gene60271.t1;Parent=MS.gene60271.t1
chr1.1 exon 8723529 8723650 8723529 ID=MS.gene60271.t1.exon9;Parent=MS.gene60271.t1
chr1.1 CDS 8723529 8723650 8723529 ID=cds.MS.gene60271.t1;Parent=MS.gene60271.t1
chr1.1 exon 8723716 8723785 8723716 ID=MS.gene60271.t1.exon10;Parent=MS.gene60271.t1
chr1.1 CDS 8723716 8723785 8723716 ID=cds.MS.gene60271.t1;Parent=MS.gene60271.t1
chr1.1 exon 8724450 8724542 8724450 ID=MS.gene60271.t1.exon11;Parent=MS.gene60271.t1
chr1.1 CDS 8724450 8724542 8724450 ID=cds.MS.gene60271.t1;Parent=MS.gene60271.t1
chr1.1 exon 8724781 8724908 8724781 ID=MS.gene60271.t1.exon12;Parent=MS.gene60271.t1
chr1.1 CDS 8724781 8724908 8724781 ID=cds.MS.gene60271.t1;Parent=MS.gene60271.t1
chr1.1 exon 8727166 8727307 8727166 ID=MS.gene60271.t1.exon13;Parent=MS.gene60271.t1
chr1.1 CDS 8727166 8727307 8727166 ID=cds.MS.gene60271.t1;Parent=MS.gene60271.t1
chr1.1 exon 8727394 8727450 8727394 ID=MS.gene60271.t1.exon14;Parent=MS.gene60271.t1
chr1.1 CDS 8727394 8727450 8727394 ID=cds.MS.gene60271.t1;Parent=MS.gene60271.t1
Gene Sequence

>MS.gene60271

ATGAGAAGAAGAATCTGGAATCTTCTCTCCAACAAAAACAAACTCATCCAATTCACATTTCCAATCTCAACCTCCAACTCCCGCGTAATTCCGTTTCGTTCTTACTGCACCGATCCATCACGCATTCTCAACCATAACCGTCCAGGTTCATCCCTCTTCTCTTTCTCCTTCAATTCAACATTAAAAATTTCTCCAAATTGAATTTTACTCTATTCAATCACCTCTCAAAATCATATTTACTGTGAAATCATATTTTGATAACACAGTAAATTAGATTGTTAACGCAATATGTAGCTAATACAATTCAGTTGATGGTTAATGAATATAATCTGCAACACCGACACTTCTGATGATCGAATACATGTCTGGTGTCCAACTCTGCACAGACACATGTGATTACGTTCAATTAAGTCATTTTCTTAAATTATTACTGGAGCTGACGTGTCAGTGCCGTGTTGGTGTCCGCCAATGTGTCAGCTCTTCATAGTGAAGATATAACTATGTGTCCTGGTTCATAAATCATCCACTAAACACAATTAACAATGATTTTGAATTGAACGTCATTTGTGGTTAATGAATATTGTGTAGATTTGAGCACTTGGGAATCATGTTTATTTAAACATTATTCGGATGATTGATAGATATATGTGTATATTTGAACACTTGAAAATCGTGGTTAATCACATTCAAAATCGTGGTTAGTAGTGTTTTGAGTTAATGATTAATGAGTTGCAACACCTTTTTATATTCATTCACTATCTACTAAACGTAATTAAACATATATTTGAATTGTGTTAGCTATCTAATTTGGTGTCGAATTTTAATGTCTGATTTTCGTGTCAAAATAACACAACTCGATTTTCAGGACCGCTTGTCCAGTACAAAAATCTTGTTGATCAAGGGAAGTTGCAACATGATCCTTACCAAGAAACTGTTGCTACAGAGCTTCAGAATTTGTTATCAAGGTTGGAGAATTATGAGAGAGAAATGGAAGAGTATCATGTAAAATTTTAAACATAGATGTTTAAATAATGAATATGACTTCTTCATTGTTTCTGGCTTTTTGGATTGAGTTTGAATTTGTTCTTGTACTTGTTAGGTTAATCTATCTAATTGGGAGAAAAATAGGGAGAATGAGCGCCGAAGGATTCTTATGGAGGAAGTTGAGAAGCAGCAGAATGACAAGGATTGGTGGAAGCGCTTGAATAATAAAATCACTGAAAGATGGACAAACTCTAGGTAAATTTTGACTCAATTTTAAGTGATTTTGATTCAATTAGATGCTTCAACTTGTATATTTTGAGTCAATTTTAGGTGATTTTGATTCAAATAGATGCGTAAACTTGTATGTTTTTGCGAGATTTTTTTTTAGTAAAAATAGTGTTTTTGGAATTCAGCTTGTGTTTCGTTGTTGCGAATTTTGTTTTATTTAGGTACATTGTATAAAAGCTACATGTGCTGTGTATTTATTTGTTTGTTAATGACTCAGGAAAAGACCGGAGAATGTGGATCCAGGGGTAGGAAAATGGGTCTCTTATCTTAAACGTGAGAAGAAGTTGGATTCAGTAGTTGGTCGCCGTCCAACTGCTCCTCCAGCTCCCAAAGGACTTTACATATATGGCAATGTGGGCAGTGGTATTTACCTTCTTATATTTGTCTTTTGGGTAAATTATCTTTTCCATTCCATCCTCAAGATGGTTAAATTTACATTGTGCTTTCCTCTGATTTTAAAAATCACAATCCCCTCCCTTAGAAGATGAATGAGTTACTCTTCAATCCATTATGTAAACATGTTTTTTAGGGATTTTTTTACGTATGCTAGTCTCAACATTATTGACTTCTTATTTTGAACCTCTATTATCAACTGAGACTAAAGAAAATGGAATGAAATGAATGCTTCGGATGAAGTCGCAAAGCTAATAGTAGGAGTCTTTAAAACTTCATTTCACCTCGTTAAGTTATAAAATCAATAAGACATTCAATGTAATTGTTAATGAAAATTGTAAACAAGGAAAAAATTCAGCGGGAGTTTATTTATATGCTCATCGGTTACAACAACTAAATATGATACATTTTATCTCTTGGGGAAGAGAAGTGTAATTTTTATAATCAGAGGGGAGACATAATGTAGTTAAAGCAGCTTTCAAGGTAGAGGAGTGTAATTTACTTTTTTTTAATTTGGCTGATTTTTGTGGTTAGCAGTAATGCTAAATTACAATGGCCCGATTCAATTTCTAATTATGGTATTGCTTAAAGTTTCTGGTTACTTCATTTATGTCACTTGTCAAAGTCGATGTTATGTATTACCCCGATTCTCTTTTTAGCCTTATTTTTCCAGTTTCTTTTCTAATTATTTTGCTCGCGTTTTGAATGCTGAAGGGAAAACAATGCTGATGGACATGTTTTATAGTGCTACTGAAGGAATAGTTAAACATCGAAGAAGGTATCACTTTCATGAGGTGAGTGTTTTAATGTGTTTGTGGGCATAACCTGAATATTTATTTATGGTCTTAATGACATAGATGTCATCAATATTATTTTCTGGAATAAATGTAACATCTTCCTATAGCAAGACCATGAATCATTGTTGTGAACATATTACTGAAAGCGATAGACTTATACCTTTTCCTTTCTTGTGCAGGCCATGCTGAGAATAAATGAACATATGCACAAGACATGGAAGAAACAAATGGAAGAGAAGCCTTTGCAGTCAGGCATTGCAAGTTGGATTATGAATCTTCCATTTGACACTAAAGCTAAGGAGTGGTTAGCTGCAGAAGAAAGATACAAGAAAGAGGTGCAGATGAAACACATTCTTCCAGATGTAGCAGATAAGTTTTTTCTGGATCAAGAAGGAGAAGAAAAGGGAGCTAGCATTTTGTGCTTTGATGAGATACAGGTAAAGGAAAATTATTACGCTGTGTTATAATGTGTTCCTCATATTTGTATCCTAAAGTAAAAGTATAGATTTCCATACCCATATCCGTCAATTCTGATTTAACACTTGAGGAATATTTTCTTATTGAGTTTTTTGTTTTCGGTGACTAATGGGCACATCCATCCCTCTTGGAGCAGTTTTTCATGATTCATTTGAAAGGATTTTAGGGAAGTGTGCATTTTGAGTCACTTCCCTGGTCTACTTTAGTATGTGTTATTTTGTCAAGTTTTTTCGTTACAAATATTTTCCCCACCCATATCTTCTGTTCCAGATCATACTATCTGGTGGAAACTCAATGTTAGGCTTTGAACACTTCTGTTGTAAGTTTGAGTTGCTTTGGTTTTTTTCCCCTCCTTGGCTTATTCTTAACATGATTGCTGAGCTTTCTCTGTATCATATCATTTTTTCTTTCATACTTTGGCTTGTAAGGAAGATAATGACTTAATTTTTATGCTCTTTATTTCAGACTGTTGATGTATTTGCTATTGTGGCTTTATCTGGAATTCTAAGCAGATTGCTGAGTAGTGGAACTATTATTGTGGCCACAAGTAATCGAGCACCAAAGGACTTGAATGAGGTGTGTTCTTTATTATTCAATCTTTTCACTTGATGTGTTGTCTTTTTCCTTTGTTACTCAATTATGTTGCAGGGGGCTTATAAACACACCGAAGACATCCCTGAAGATTTATTTTTTTTTTTTGGAAGATCTTGATTGTAGACCAATTGGAAAAGGGCCTCATATTTGTTTATTGATATTTTCTTCAAAAATGTTTTTTTGTGCAGGCTGGTATGGTACCAGAATTCTTCCAAAACCTTCTTTCTAATTTGGAAGATCATTGTGAGAAGGTGTTGGTAGGCAGTGAAATTGACTACCGTCGTTTTATAGCACAAAGATCAGAAAACCGGGTGAGAATTAATCTGTCACTTTCATCACCTTTATTTAAACATGTGATGTCAGTATACTTCTCAGTGGTAGAATTTTATTATCAGCCATAGTAGCAGTGGAATTATATCCACCAATTATTTGATCTATTTTTCCTCAAATAGCTGTTTAAGATATGCATCTCTAGCAACTGCATTTGCAGTTTTGCTTGGTCATTGATTTCTTACACACGCAAATGTGATGTCAGTATATTTCATAGCAGTAGAGTAATTTTTTAGTTTGATCAGCCATATTAATAGATAAATACCCAATAATAATTTGAATATATTTTCCTAACCCAATTCTTTTTTATTATATGCATCTCTAGGAATTGTATTTGCACTATATTGTGGCCATTGATTTCTTATATACATCATTTACCATACACAGTTACTGAAGTTATTAAAATAAAATGTAAAAGTTGAGAGTTTGGTTTTGAATACAATAGAGGGAATAATCAATAGCTTAGGTTGTTTGCTCTCGGCTTTGTATTACCTACAAAGGGAAAAGCGAAATCTTCATTTCTGATGGTGAAAATGTGTGCATTGGCAACTTCGGGACACGTGGAATGATCTAATATTGTTAATGGTCCATCAATGAATGTCATTGTGTATATACCCTAATTGATGTAGCCCATTCCATATTGACTTTGATATTGGTTGTGTTTGGTTTTCTTAAGGTGTGTAAACGTTGGCATGATAGTTGATTAACCATAAATAAACAGTTGTGGCTCTTTAGTTAGGTACTTGTACATCAATACAAAAAAAAAGTATCTTAGTAGTTACTTTGCATCATCGGTTCAGTAAAACAAAACATTGCATATAACTTTATCCAAATTATGAAATGCCAATTCAATGTAAATGTGGCTTCTTTGTCAATTACAAAGTATTATGATGCCAACCTTACAAATATTGTACAGCCAAAATCCTTCTACTCAACAATATAATCATAGGATGGAAACTGGAAAGTCCCCAAATGAGGACACTTCCATGTTTGACATCATTGAAAGAAACTTTTTTCTATTATACACTACTTTGGTTTTGAACAGTATTTAGTCATGATACTTGTGCGAAAAGTCAACTGCACTTTTCTATCCATGCACAGCGTATTCTGATAGTTGCATGTCAACAACACATCCTATTATGCCTACTAGAACTCAAGTCTCAAACGTATGGGAATTTAAGTTGATATAGATATGCAGGTAAACTATTTATGCCCTATTGAAAGGGAAACCATCAATGAATTTGAGAAAAAATGGCAGGATGCAACAGGCAGATTTGGAGGAAAAATAATCTCCAACACCATTTCAGTGATGTTCGGAAGGTATTAGGTTTCCTATTTATATTTAATGCTGTATATAAATGAATCATATAAGTTTTTTGTGACAGGACTCTTGAGGTTCCTGAAAGCTGCGAGGGAGTTGCCCGCTTTACATTTGACTATCTATGTGGTCGTCCGGTATGTTCTTTCTCTTTGTTTGGTTTCTGTATAAATTATTGTTTCCTAGCAAATATAGTTACCAGCATATTGTTTGGCCACGAGGAAATGGAAGGGAGGGAATTAAAAGAGGCAAAATTCCTCCTCAGTCCATTTTTATTCCCCTCTGTCATTGGGCGATTTGGAGGGGACAGAAGATGGGTTTAAGATATTTGTAATATGTTGACTAAAATATCCTTATATAAACTTTGTTCTTCTCATCAACCATACACAGACATGCTATCCATTCTTTCTAGTCACTGCCGCCACTGTCCGACGAAGGATCTGTCTCCACTTTCTCTTCTCCTTCTTTTGTATAAACCCCATAACTTAGTTGGAAACAAATTGAGTTCTAAGTTTGAATTTGATAATTTTTTGCCAGTGGTACTAAACTAGGACTGGTACTCGAGTCGGTCAGGGTACTGGATTGATGGGTCACTAGTCAAACCAATGGGTTACTCGTTGAGCCACAAAAGTATATGTATTTTATTTGCAAATATTATATTAAAAATATCCTATACATAACTTATTTATCATGACAACAATAGACTCATGCCTTAGTGTGGTGGTAAACATAGCTAAAGCTAATATTTTGGGATACCTGGAAGTAAGATCTCTCCCTCGCTCTAACTGTTTCGATTTTCAGTTGGGTGCAGCAGATTATATTGCAGTAGCTGAAAACTATCACACCGTTTTCATATCTGATATTCCAGTGATGAGCATGCGCATTCGTGACAAGGTATTAATTAAAACGGGTTGAGTTGGCCTCATGTGTTTATAATTGACTAATGTATTTTAAGAAGACATATTGTTGGTTAAAAGCTTGCTTTCTTGCTGTGTCTACATTTTCTAAGTTATTCTTCAAATGCAATGCTTGAAATTTTTATTCATCAGTTGTGACATTACAATTTGATACACTTCTCTTTCAAGACTTCCCTATCTTATTTTGAGCAAAAAAAACATTCTCTACTTTTCAGGCACGGAGATTTATCACTCTTATTGACGAATTATACAATCATCATTCTTGTCTATGTTGCTTGGCATCTTCTTCAATTGATGAATTATTTCAAGGAACTGAGGAGGGCACACTTTTTGACTTGGAGAGGTAATTTTGTCTGTTTGTATGTGATTTATGATGCATGGAAAGCTTTTGGATTTCAAAGTATAAATGCTTTGGATCTGCTGTAGTGGTGTGATAATTCTGTTTGCCTTTTTTATCACTTCACTGTCAATATATTATCCAGTGGTTGATTCTGATGCTTGTTATGCCTTGTAGCTGGGAATAGGTAGTTTCAAATTGGAAACATTTATATTAAATTCCTAATTCTAGATTGTTTGTTGATGTTGTTGCTTGGCTAACTCATTTTCAAAGTAATTATTGTAAAAACTTATCATGGATATTTATTTCCTCAACCAACCATGTTAGACAAAGATAGGACTTGGAAGGTGAGTTACAAGAATATTTAGCAGTTAGAGATGTTTAGTTAGGGGACGATGTATAAAGAGATGATTCAGAAACATTGTTAGGAGAATGAGTCTTTGATAAGTTTAAAACAGAAACTTCATTAAACTTCACACAATGAGCACACAAACTCACAAATCTGGTAGGTGAACTTTCATTAAACTGCGCTCTATTTTGAGGCTGTAGAGTGTAGAATGAAGATTTTCCCTTTTATAGATGCTAAAAGTCCACTCGTGAAGATTTTCTCTTTTATAGATGCTATAAGTCCACTCATGAAATTCCCAAGACTACTTGTTCAGGTAGTTTTAGTACTTGGAAGGAAATCAACTCAAAAAGCCTCTCTATATTCTTCTACTTTACCAATCTATCTTACACTGCTAATTATTCAAAGGGGTTTTCTTTTACTTGTCCCCCGTATCGATCTATTAGAGCCTTCGTCAACTTATCCCCAGTCAAAATCTCATTGACCTCTCAGAGAAGAATAAACTAGACAATTGTTCCTCCCTGCGTGCATAGAGACCGGGTCAAGTCTCACCTTGACTTTTTCAAATGTATTTGAACTTCAAAATAAATATCAGCCTTGGTGATCCATGCTGCAAGGTCTATTTTATCAAACATCGGTAACTCCACCTTTTCAATTGACATTTTCTACTCGTCCCAAGATTTACCTTGTGGTTTTGTTGACCCTGGTTGATAAAACCTATCAGCTAAAGATGAATCTCCAACTGAAGAGGTTTCAACTTTCAACCCTTTTTTGCTATCAGTTGTTGATCTCTGTCGAAACAGATCAATGGTGCTGCAATTCAGCCTTCATCCTCTGATTGTCCTTCATATAACCACACTGCATGCAAATATGCAATTAAATGATTGCTAAAGTTGTCCATATAACTACAGTATTACACAATTAAATAACTACTACAAAATCGTCCTACCATATATAACCGCCATATTATTATTACTAAATACAGACCTGTTATTGTCTTATTTCTCACAGTGTATCTGAGCCACAGTTTAGGCTTTGTTAATAGCATGATCCACAAGCTGGCTCGTATTCTTCAGTTCTCAATTCCTGTCTCTCTTCTACATTATATTTCTATTGCATTTTTGCTTCCTCCAGGGATTCTCTAAACTCTAGATCCCTTACAGACCATGACAGTTATTTATTAGAGTCACTGTAATCCTGCAACAAATTTATATCTGATCAAAGTACCAAACAAGAAACCAAACATTACTTTTCCCATTATATAGCATAAAATATAAGAGGGAGCCTTGGCGCAACGGTAAAGTTGTTGTCACATAACTGAAAGGTCACGGGTTCAAGTCCTGGAAATAGCCTCTTGTGTAAAAAACAGGTTAAGGCTGCGTACAATACACCAAAATGGTGGGACCCCTTTCTGTACCCTGCGTATGCGGGAGCTTTAGTGCACCGGGCTCCCCTTTTTTTTATAGCATAAAAAAATTTACTTGGCAAGAAGGGAGGGTTTTTGCTCAAAATGCACCATAGATCTATGTTAAGTTACTTCCTTTTTTTGGTGAAGTTAGGTTGCGTAGAGCCCAAGATGATTGTAAAAGTGGTTTTACTGATTGAGTTGAGAAGTTGGAGACCATATCCTTGATTTAAAAGGTAAACTTCCAATGTGTTTCCAAACATGGCATAGAATGTAAGCAGACTTAAAAATAAGGAAATAGTTATAAACTAGATTTTTCTTGATAATATGTGGTTATAATTAGTAGTTTTCATAGGTTCTGTTCTTTGGGCCAACATTCTTTTTATCGTAAGTTTCTCTTAATGATGTATTAACAGCCACTGACTGACAGATTTGCTTTTGATTGAAATTTAGCGCTCTTAATTATATGATGCATTGGTAACTGAGCCTCCTCACTCTTGTTTCGGTTCCAGTTTCCAGTTTGAAACAGAGGCTGAAGGCGGGAAACTTCGCCGCGATGTCTTAGCAGAAGGCAACGTGGGCTCAGGAGGTACCCCTGTTGGCATCACATCCATGCTATCTGGTCAGGAAGAGCTGTTTACTTTTCAGAGAGCTGTAAGTAGTTACCATTCCTGAATTTTAGTCGTGCAACAATAGTTACAAAACCATTTATAACATTATGCTGAAATGGATCCCTGTAGCATCTCTTTTTCCTCACTGCAAGTACTGTAGTTGCATTTCATAATGATTTTCCTTGA

Protein sequence

>MS.gene60271.t1

MRRRIWNLLSNKNKLIQFTFPISTSNSRVIPFRSYCTDPSRILNHNRPGPLVQYKNLVDQGKLQHDPYQETVATELQNLLSRLENYEREMEEYHVNLSNWEKNRENERRRILMEEVEKQQNDKDWWKRLNNKITERWTNSRKRPENVDPGVGKWVSYLKREKKLDSVVGRRPTAPPAPKGLYIYGNVGSGKTMLMDMFYSATEGIVKHRRRYHFHEAMLRINEHMHKTWKKQMEEKPLQSGIASWIMNLPFDTKAKEWLAAEERYKKEVQMKHILPDVADKFFLDQEGEEKGASILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPKDLNEAGMVPEFFQNLLSNLEDHCEKVLVGSEIDYRRFIAQRSENRVNYLCPIERETINEFEKKWQDATGRFGGKIISNTISVMFGRTLEVPESCEGVARFTFDYLCGRPLGAADYIAVAENYHTVFISDIPVMSMRIRDKARRFITLIDELYNHHSCLCCLASSSIDELFQGTEEGTLFDLESFQFETEAEGGKLRRDVLAEGNVGSGGTPVGITSMLSGQEELFTFQRAHLFFLTASTVVAFHNDFP