Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60683.t1 | XP_024642059.1 | 99.1 | 431 | 4 | 0 | 1 | 431 | 1 | 431 | 3.40E-251 | 877.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60683.t1 | Q75HX5 | 74.4 | 450 | 91 | 7 | 1 | 431 | 1 | 445 | 4.0e-184 | 645.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60683.t1 | G7ICY3 | 99.1 | 431 | 4 | 0 | 1 | 431 | 1 | 431 | 2.4e-251 | 877.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene60683.t1 | TF | TUB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene60683 | -0.840193 | 1.01E-57 | -1.69E-46 |
| MS.gene050301 | MS.gene60683 | -0.804425 | 2.17E-49 | -1.69E-46 |
| MS.gene051663 | MS.gene60683 | -0.801314 | 9.54E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene60683 | -0.809064 | 2.28E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene60683 | -0.833055 | 6.64E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene60683 | -0.855037 | 8.26E-62 | -1.69E-46 |
| MS.gene054930 | MS.gene60683 | -0.801562 | 8.49E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene60683 | -0.815732 | 7.95E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene60683 | -0.824306 | 8.67E-54 | -1.69E-46 |
| MS.gene055428 | MS.gene60683 | -0.841591 | 4.33E-58 | -1.69E-46 |
| MS.gene055604 | MS.gene60683 | -0.802256 | 6.12E-49 | -1.69E-46 |
| MS.gene056612 | MS.gene60683 | -0.809269 | 2.06E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene60683 | -0.804966 | 1.68E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene60683 | -0.813269 | 2.79E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene60683 | -0.827615 | 1.42E-54 | -1.69E-46 |
| MS.gene058082 | MS.gene60683 | -0.806013 | 1.01E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene60683 | -0.835416 | 1.70E-56 | -1.69E-46 |
| MS.gene058142 | MS.gene60683 | -0.801544 | 8.57E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene60683 | -0.800943 | 1.14E-48 | -1.69E-46 |
| MS.gene058661 | MS.gene60683 | 0.807433 | 5.07E-50 | -1.69E-46 |
| MS.gene058710 | MS.gene60683 | -0.816578 | 5.15E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene60683 | -0.802991 | 4.31E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene60683 | -0.830601 | 2.68E-55 | -1.69E-46 |
| MS.gene059518 | MS.gene60683 | -0.834004 | 3.85E-56 | -1.69E-46 |
| MS.gene059597 | MS.gene60683 | -0.816883 | 4.40E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene60683 | -0.836031 | 1.19E-56 | -1.69E-46 |
| MS.gene059894 | MS.gene60683 | -0.815787 | 7.73E-52 | -1.69E-46 |
| MS.gene06037 | MS.gene60683 | -0.804216 | 2.40E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene60683 | -0.845989 | 2.88E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60683.t1 | MTR_1g098790 | 99.072 | 431 | 4 | 0 | 1 | 431 | 1 | 431 | 0.0 | 891 |
| MS.gene60683.t1 | MTR_2g007930 | 80.460 | 435 | 73 | 5 | 1 | 431 | 1 | 427 | 0.0 | 702 |
| MS.gene60683.t1 | MTR_2g020280 | 58.073 | 384 | 137 | 5 | 48 | 431 | 34 | 393 | 4.16e-157 | 449 |
| MS.gene60683.t1 | MTR_5g020580 | 53.636 | 440 | 171 | 11 | 1 | 431 | 1 | 416 | 6.84e-154 | 442 |
| MS.gene60683.t1 | MTR_1g022370 | 48.690 | 458 | 172 | 9 | 1 | 431 | 1 | 422 | 8.68e-146 | 422 |
| MS.gene60683.t1 | MTR_8g077195 | 51.708 | 439 | 177 | 12 | 1 | 431 | 1 | 412 | 2.69e-145 | 420 |
| MS.gene60683.t1 | MTR_1g088960 | 50.801 | 437 | 174 | 10 | 1 | 431 | 1 | 402 | 6.49e-145 | 419 |
| MS.gene60683.t1 | MTR_2g020280 | 57.547 | 318 | 111 | 5 | 114 | 431 | 1 | 294 | 9.90e-125 | 363 |
| MS.gene60683.t1 | MTR_2g076200 | 47.906 | 382 | 148 | 6 | 51 | 431 | 40 | 371 | 2.37e-119 | 352 |
| MS.gene60683.t1 | MTR_2g076210 | 43.377 | 385 | 162 | 10 | 51 | 431 | 35 | 367 | 3.78e-96 | 293 |
| MS.gene60683.t1 | MTR_8g077675 | 42.661 | 436 | 197 | 16 | 1 | 424 | 1 | 395 | 2.74e-93 | 287 |
| MS.gene60683.t1 | MTR_8g077620 | 39.310 | 435 | 204 | 17 | 1 | 424 | 1 | 386 | 6.63e-90 | 278 |
| MS.gene60683.t1 | MTR_8g077650 | 38.601 | 386 | 156 | 16 | 48 | 423 | 14 | 328 | 1.24e-62 | 206 |
| MS.gene60683.t1 | MTR_1g023800 | 50.649 | 154 | 61 | 4 | 1 | 147 | 1 | 146 | 8.13e-44 | 150 |
| MS.gene60683.t1 | MTR_8g077640 | 38.783 | 263 | 122 | 6 | 1 | 235 | 46 | 297 | 8.69e-42 | 152 |
| MS.gene60683.t1 | MTR_8g077640 | 45.098 | 102 | 41 | 3 | 322 | 421 | 295 | 383 | 1.96e-16 | 80.9 |
| MS.gene60683.t1 | MTR_0210s0010 | 40.404 | 99 | 52 | 2 | 95 | 193 | 8 | 99 | 4.68e-14 | 68.6 |
| MS.gene60683.t1 | MTR_2g105390 | 35.345 | 116 | 49 | 3 | 320 | 430 | 265 | 359 | 9.15e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60683.t1 | AT1G76900 | 70.110 | 455 | 112 | 9 | 1 | 431 | 1 | 455 | 0.0 | 607 |
| MS.gene60683.t1 | AT1G76900 | 70.110 | 455 | 112 | 9 | 1 | 431 | 1 | 455 | 0.0 | 607 |
| MS.gene60683.t1 | AT1G76900 | 70.110 | 455 | 112 | 9 | 1 | 431 | 1 | 455 | 0.0 | 607 |
| MS.gene60683.t1 | AT1G43640 | 67.800 | 441 | 120 | 6 | 1 | 431 | 1 | 429 | 0.0 | 597 |
| MS.gene60683.t1 | AT1G25280 | 69.955 | 446 | 118 | 7 | 1 | 431 | 1 | 445 | 0.0 | 593 |
| MS.gene60683.t1 | AT1G43640 | 69.786 | 374 | 95 | 4 | 65 | 431 | 1 | 363 | 0.0 | 533 |
| MS.gene60683.t1 | AT2G47900 | 53.364 | 431 | 176 | 3 | 1 | 431 | 1 | 406 | 1.03e-164 | 469 |
| MS.gene60683.t1 | AT2G47900 | 53.364 | 431 | 176 | 3 | 1 | 431 | 1 | 406 | 1.03e-164 | 469 |
| MS.gene60683.t1 | AT2G47900 | 53.241 | 432 | 176 | 4 | 1 | 431 | 1 | 407 | 2.95e-163 | 466 |
| MS.gene60683.t1 | AT2G18280 | 53.288 | 441 | 148 | 12 | 1 | 431 | 1 | 393 | 3.85e-150 | 432 |
| MS.gene60683.t1 | AT2G18280 | 53.288 | 441 | 148 | 12 | 1 | 431 | 1 | 393 | 3.85e-150 | 432 |
| MS.gene60683.t1 | AT1G47270 | 55.181 | 386 | 135 | 5 | 48 | 431 | 39 | 388 | 4.51e-142 | 411 |
| MS.gene60683.t1 | AT1G47270 | 55.181 | 386 | 135 | 5 | 48 | 431 | 63 | 412 | 9.14e-142 | 411 |
| MS.gene60683.t1 | AT1G47270 | 55.181 | 386 | 135 | 5 | 48 | 431 | 64 | 413 | 9.77e-142 | 411 |
| MS.gene60683.t1 | AT5G18680 | 50.777 | 386 | 156 | 7 | 49 | 431 | 35 | 389 | 1.61e-130 | 382 |
| MS.gene60683.t1 | AT3G06380 | 51.706 | 381 | 149 | 9 | 53 | 431 | 33 | 380 | 7.99e-127 | 372 |
| MS.gene60683.t1 | AT1G25280 | 69.403 | 268 | 72 | 6 | 173 | 431 | 1 | 267 | 4.11e-122 | 356 |
| MS.gene60683.t1 | AT1G25280 | 69.403 | 268 | 72 | 6 | 173 | 431 | 1 | 267 | 4.11e-122 | 356 |
| MS.gene60683.t1 | AT1G53320 | 47.520 | 383 | 156 | 5 | 50 | 431 | 41 | 379 | 2.61e-118 | 350 |
| MS.gene60683.t1 | AT5G18680 | 51.553 | 322 | 123 | 6 | 112 | 431 | 7 | 297 | 6.56e-106 | 315 |
| MS.gene60683.t1 | AT3G06380 | 51.420 | 317 | 120 | 8 | 116 | 431 | 5 | 288 | 7.70e-99 | 297 |
| MS.gene60683.t1 | AT1G61940 | 55.814 | 86 | 38 | 0 | 56 | 141 | 1 | 86 | 2.86e-28 | 112 |
| MS.gene60683.t1 | AT1G61940 | 59.375 | 64 | 26 | 0 | 56 | 119 | 1 | 64 | 8.26e-20 | 88.6 |
Find 125 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATGAGCTCTGGCTGGCC+TGG | 0.187108 | 1.2:-70715567 | None:intergenic |
| ATACCCTCTCTCGGCCTTTC+AGG | 0.205536 | 1.2:+70715971 | MS.gene60683:CDS |
| GCAGCATTGCTTGTTGAAAA+TGG | 0.220754 | 1.2:+70714771 | MS.gene60683:intron |
| ATGTTGGTGCCTTAACTTTA+GGG | 0.281753 | 1.2:+70715770 | MS.gene60683:CDS |
| AATGTTGGTGCCTTAACTTT+AGG | 0.285851 | 1.2:+70715769 | MS.gene60683:CDS |
| CTTTCCGATGTAAGTGTTAC+TGG | 0.296608 | 1.2:-70714880 | None:intergenic |
| CTGTAGGTTCTCAGATATAA+TGG | 0.306980 | 1.2:+70715662 | MS.gene60683:CDS |
| CTCACCTGCTTCAGAGAAAC+AGG | 0.315099 | 1.2:-70713936 | None:intergenic |
| GAATGAGCTCTGGCTGGCCT+GGG | 0.345465 | 1.2:-70715566 | None:intergenic |
| CATGGGCTGTTCTGTATAAC+TGG | 0.352285 | 1.2:-70713741 | None:intergenic |
| GCCAGCTGAGCATTATTATA+GGG | 0.361480 | 1.2:-70715363 | None:intergenic |
| GTCGCTCCTCATGCCGCAAC+AGG | 0.364636 | 1.2:+70715855 | MS.gene60683:CDS |
| CGTGATGTGAGGGATGGATT+TGG | 0.379788 | 1.2:+70713627 | MS.gene60683:CDS |
| AGCCAGCTGAGCATTATTAT+AGG | 0.383322 | 1.2:-70715364 | None:intergenic |
| CTCTTCCTTTGCCTCAGTCC+TGG | 0.393245 | 1.2:+70714317 | MS.gene60683:CDS |
| GAAAGAATCCTCAAGATTGC+GGG | 0.410283 | 1.2:-70715589 | None:intergenic |
| CTCTGTGCAAGTCGTTCTTC+TGG | 0.410800 | 1.2:-70714820 | None:intergenic |
| CTGGCAATGAAGACGAGGAG+GGG | 0.419000 | 1.2:+70715688 | MS.gene60683:CDS |
| GCATGAGGAGCGACAGGTGC+AGG | 0.424142 | 1.2:-70715846 | None:intergenic |
| TGGCAATGAAGACGAGGAGG+GGG | 0.429911 | 1.2:+70715689 | MS.gene60683:CDS |
| TAACTGCCACTAGGGACCTT+TGG | 0.430993 | 1.2:-70715429 | None:intergenic |
| TCGTGATGTTATTAAGAGAT+TGG | 0.435663 | 1.2:+70713788 | MS.gene60683:CDS |
| TTTCCCTGTTTCTCTGAAGC+AGG | 0.440467 | 1.2:+70713932 | MS.gene60683:CDS |
| GACAAGATTATTCTTCAGTT+CGG | 0.446887 | 1.2:+70715912 | MS.gene60683:CDS |
| TGTGCTGGCTGCGACGGTGC+AGG | 0.449592 | 1.2:-70715879 | None:intergenic |
| CCCGCTTCATCCCTCGAGCC+TGG | 0.453190 | 1.2:+70715534 | MS.gene60683:CDS |
| AAGGCTTCCTGGACATCAAA+GGG | 0.458001 | 1.2:+70713677 | MS.gene60683:CDS |
| CACAGAGTATGTTATATCAA+TGG | 0.458685 | 1.2:+70714836 | MS.gene60683:CDS |
| GAGCCTGGTGGTGTTGTCCC+AGG | 0.458781 | 1.2:+70715549 | MS.gene60683:CDS |
| AATGCTCAGCTGGCTCCTCC+TGG | 0.458971 | 1.2:+70715372 | MS.gene60683:CDS |
| TGGAAGCAACTGAGAGTACT+TGG | 0.468061 | 1.2:+70713808 | MS.gene60683:CDS |
| TGTAGGTTCTCAGATATAAT+GGG | 0.470818 | 1.2:+70715663 | MS.gene60683:CDS |
| AGATTGCGGGGAATGAGCTC+TGG | 0.475959 | 1.2:-70715576 | None:intergenic |
| TGTATCATAAATTATGAACT+TGG | 0.479777 | 1.2:-70715334 | None:intergenic |
| TGCAGCTGTTCATGCCATCT+AGG | 0.480880 | 1.2:-70715747 | None:intergenic |
| TCCCTATAATAATGCTCAGC+TGG | 0.481879 | 1.2:+70715362 | MS.gene60683:CDS |
| AAGGGGCAAGTCGCGTAGTT+CGG | 0.484348 | 1.2:+70713695 | MS.gene60683:CDS |
| TGCGGGGAATGAGCTCTGGC+TGG | 0.484831 | 1.2:-70715572 | None:intergenic |
| GACTTGCCCCTTTGATGTCC+AGG | 0.489493 | 1.2:-70713684 | None:intergenic |
| ACCTATGAGTTGAATGTCCT+TGG | 0.490286 | 1.2:+70715468 | MS.gene60683:CDS |
| TTGTCATGGTCTGACTGTGC+TGG | 0.490534 | 1.2:-70715894 | None:intergenic |
| CCAGGCTCGAGGGATGAAGC+GGG | 0.492821 | 1.2:-70715534 | None:intergenic |
| TCACACGTCCCCTAAAGTTA+AGG | 0.494461 | 1.2:-70715779 | None:intergenic |
| ACCAAGGACATTCAACTCAT+AGG | 0.504041 | 1.2:-70715469 | None:intergenic |
| TCTGACTGTGCTGGCTGCGA+CGG | 0.508467 | 1.2:-70715885 | None:intergenic |
| TTGAATCTACGGCTGCGTCC+AGG | 0.511465 | 1.2:-70715390 | None:intergenic |
| TTAAGAACAAGTCTCCTAGA+TGG | 0.514190 | 1.2:+70715733 | MS.gene60683:CDS |
| GTTGCGGCATGAGGAGCGAC+AGG | 0.514556 | 1.2:-70715852 | None:intergenic |
| GCAGGTCCTGTTGCGGCATG+AGG | 0.520662 | 1.2:-70715861 | None:intergenic |
| CATTCAACTCATAGGTGACC+TGG | 0.520911 | 1.2:-70715461 | None:intergenic |
| TGGCCTGGGACAACACCACC+AGG | 0.526446 | 1.2:-70715552 | None:intergenic |
| GAGGTTGATCATGCAACTCA+TGG | 0.527376 | 1.2:-70713719 | None:intergenic |
| CAGGACTGAGGCAAAGGAAG+AGG | 0.529546 | 1.2:-70714316 | None:intergenic |
| TTCTCAGATATAATGGGAGC+TGG | 0.533677 | 1.2:+70715669 | MS.gene60683:CDS |
| CCCATGGGCTAGCCTTCCAC+CGG | 0.534682 | 1.2:+70713758 | MS.gene60683:CDS |
| ACACTTACATCGGAAAGCTT+AGG | 0.535916 | 1.2:+70714886 | MS.gene60683:CDS |
| GCGATGTTGTAACTGCCACT+AGG | 0.538385 | 1.2:-70715438 | None:intergenic |
| GTAGTATTGTTCGTGATGTG+AGG | 0.542989 | 1.2:+70713616 | MS.gene60683:CDS |
| GCTGGCAATGAAGACGAGGA+GGG | 0.546678 | 1.2:+70715687 | MS.gene60683:CDS |
| CACGAAGAAGCTCCGGTGGA+AGG | 0.548406 | 1.2:-70713770 | None:intergenic |
| ACCAGGCTCGAGGGATGAAG+CGG | 0.552625 | 1.2:-70715535 | None:intergenic |
| TCCGGTGGAAGGCTAGCCCA+TGG | 0.553438 | 1.2:-70713759 | None:intergenic |
| GCAATGAAGACGAGGAGGGG+GGG | 0.554322 | 1.2:+70715691 | MS.gene60683:CDS |
| TAAGGCTTCCTGGACATCAA+AGG | 0.555010 | 1.2:+70713676 | MS.gene60683:CDS |
| ATTCTTCAGTTCGGTAAAGT+CGG | 0.555879 | 1.2:+70715921 | MS.gene60683:CDS |
| TTCGTGGGCCTCTAGTACCA+AGG | 0.556399 | 1.2:-70715485 | None:intergenic |
| GCTTACCAGGACTGAGGCAA+AGG | 0.556568 | 1.2:-70714322 | None:intergenic |
| GCTCATTCCCCGCAATCTTG+AGG | 0.558110 | 1.2:+70715581 | MS.gene60683:CDS |
| ACATATCGCAAATGCCTGAA+AGG | 0.558665 | 1.2:-70715985 | None:intergenic |
| TTACAGCCGGGGTATAGGGA+TGG | 0.560354 | 1.2:+70714245 | MS.gene60683:intron |
| ATAGTGCAATTCATCCTTCG+TGG | 0.560544 | 1.2:-70715501 | None:intergenic |
| ATAACATCACGAAGAAGCTC+CGG | 0.562691 | 1.2:-70713777 | None:intergenic |
| GGACAACACCACCAGGCTCG+AGG | 0.563929 | 1.2:-70715545 | None:intergenic |
| CGACGGTGCAGGTCCTGTTG+CGG | 0.564882 | 1.2:-70715868 | None:intergenic |
| CGATGTTGTAACTGCCACTA+GGG | 0.565087 | 1.2:-70715437 | None:intergenic |
| GGCAATGAAGACGAGGAGGG+GGG | 0.571047 | 1.2:+70715690 | MS.gene60683:CDS |
| GGCATGAACAGCTGCAATGT+TGG | 0.571332 | 1.2:+70715754 | MS.gene60683:CDS |
| GTGCTGCGGTCTGCAAGTCG+TGG | 0.571719 | 1.2:+70713856 | MS.gene60683:CDS |
| GCAACTGAGAGTACTTGGCC+TGG | 0.572741 | 1.2:+70713813 | MS.gene60683:CDS |
| ATTGTTCGTGATGTGAGGGA+TGG | 0.573863 | 1.2:+70713621 | MS.gene60683:CDS |
| CCGGTGGAAGGCTAGCCCAT+GGG | 0.574926 | 1.2:-70713758 | None:intergenic |
| TTGAATGTCCTTGGTACTAG+AGG | 0.577348 | 1.2:+70715477 | MS.gene60683:CDS |
| ACTGAAGAATAATCTTGTCA+TGG | 0.579174 | 1.2:-70715908 | None:intergenic |
| GACTTGTTCTTAAGAACTAG+AGG | 0.583735 | 1.2:-70715723 | None:intergenic |
| GACTGAGGCAAAGGAAGAGG+TGG | 0.586469 | 1.2:-70714313 | None:intergenic |
| TCAACACTCTTGAATACTGT+GGG | 0.587893 | 1.2:+70713901 | MS.gene60683:CDS |
| CAGTTATACAGAACAGCCCA+TGG | 0.589286 | 1.2:+70713742 | MS.gene60683:CDS |
| GGAAAGAATCCTCAAGATTG+CGG | 0.599386 | 1.2:-70715590 | None:intergenic |
| TAGTGCAATTCATCCTTCGT+GGG | 0.600652 | 1.2:-70715500 | None:intergenic |
| TGTTGGTGCCTTAACTTTAG+GGG | 0.601599 | 1.2:+70715771 | MS.gene60683:CDS |
| CAACTGAGTTTAGCAGCTGT+AGG | 0.602372 | 1.2:+70715646 | MS.gene60683:CDS |
| AGCTGGCAATGAAGACGAGG+AGG | 0.606731 | 1.2:+70715686 | MS.gene60683:CDS |
| ATCGTGCAAAGGATAAACTA+CGG | 0.607613 | 1.2:-70715611 | None:intergenic |
| AATGCCTGAAAGGCCGAGAG+AGG | 0.615434 | 1.2:-70715975 | None:intergenic |
| GACAACACCACCAGGCTCGA+GGG | 0.616356 | 1.2:-70715544 | None:intergenic |
| GTCAACACTCTTGAATACTG+TGG | 0.616544 | 1.2:+70713900 | MS.gene60683:CDS |
| TAGTATTGTTCGTGATGTGA+GGG | 0.622920 | 1.2:+70713617 | MS.gene60683:CDS |
| GGACTATCGATACCCTCTCT+CGG | 0.623014 | 1.2:+70715962 | MS.gene60683:CDS |
| TCAGTTCGGTAAAGTCGGCA+AGG | 0.626177 | 1.2:+70715926 | MS.gene60683:CDS |
| GCAACCACATGCTTACGACC+AGG | 0.629724 | 1.2:-70713831 | None:intergenic |
| AGATCCAGTAACACTTACAT+CGG | 0.632514 | 1.2:+70714876 | MS.gene60683:CDS |
| CAGGCTCGAGGGATGAAGCG+GGG | 0.635955 | 1.2:-70715533 | None:intergenic |
| ATGCCTGAAAGGCCGAGAGA+GGG | 0.636376 | 1.2:-70715974 | None:intergenic |
| GCATGTGGTTGCTTGTGCTG+CGG | 0.636839 | 1.2:+70713842 | MS.gene60683:CDS |
| TGGCAGTTACAACATCGCCC+AGG | 0.640405 | 1.2:+70715443 | MS.gene60683:CDS |
| AGCTGAGCATTATTATAGGG+AGG | 0.640897 | 1.2:-70715360 | None:intergenic |
| ACATCACGAAGAAGCTCCGG+TGG | 0.646205 | 1.2:-70713774 | None:intergenic |
| ATTCAACTCATAGGTGACCT+GGG | 0.649004 | 1.2:-70715460 | None:intergenic |
| CGGCAAGGATATGTTTACGA+TGG | 0.649091 | 1.2:+70715941 | MS.gene60683:CDS |
| GCTTCATCCCTCGAGCCTGG+TGG | 0.650835 | 1.2:+70715537 | MS.gene60683:CDS |
| ATGGATTTGGAAGCTTATCG+AGG | 0.653763 | 1.2:+70713640 | MS.gene60683:CDS |
| GTTATCGATTGATCGTGCAA+AGG | 0.656627 | 1.2:-70715622 | None:intergenic |
| GGGAGCTGGCAATGAAGACG+AGG | 0.656703 | 1.2:+70715683 | MS.gene60683:CDS |
| GGGCTGTTCTGTATAACTGG+AGG | 0.657426 | 1.2:-70713738 | None:intergenic |
| AAAGAATCCTCAAGATTGCG+GGG | 0.658101 | 1.2:-70715588 | None:intergenic |
| AGTTATACAGAACAGCCCAT+GGG | 0.669811 | 1.2:+70713743 | MS.gene60683:CDS |
| TTGGCCTGGTCGTAAGCATG+TGG | 0.677764 | 1.2:+70713827 | MS.gene60683:CDS |
| AATCTACGGCTGCGTCCAGG+AGG | 0.679597 | 1.2:-70715387 | None:intergenic |
| GTTTCACCAAAGGTCCCTAG+TGG | 0.689726 | 1.2:+70715423 | MS.gene60683:CDS |
| GATTTGGAAGCTTATCGAGG+CGG | 0.694204 | 1.2:+70713643 | MS.gene60683:CDS |
| ATGGGTCCATCCCTATACCC+CGG | 0.704486 | 1.2:-70714251 | None:intergenic |
| AGGCTTCCTGGACATCAAAG+GGG | 0.710405 | 1.2:+70713678 | MS.gene60683:CDS |
| AGTAAAGCTTACCAGGACTG+AGG | 0.714219 | 1.2:-70714328 | None:intergenic |
| TCACCTGCTTCAGAGAAACA+GGG | 0.717293 | 1.2:-70713935 | None:intergenic |
| TTGGTACTAGAGGCCCACGA+AGG | 0.736988 | 1.2:+70715487 | MS.gene60683:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTAAATTCATATTTATGA+GGG | - | chr1.2:70714703-70714722 | None:intergenic | 15.0% |
| !! | TTGTTAAATTCATATTTATG+AGG | - | chr1.2:70714704-70714723 | None:intergenic | 15.0% |
| !!! | ATTTAACAAATTTTTAGATC+TGG | + | chr1.2:70714715-70714734 | MS.gene60683:intron | 15.0% |
| !! | AAAAGATGTTAAAAAACAAG+TGG | + | chr1.2:70713983-70714002 | MS.gene60683:intron | 20.0% |
| !! | AAGCACATAAATGAAAAATT+AGG | - | chr1.2:70714212-70714231 | None:intergenic | 20.0% |
| !! | ATCAAATCAAATAGTGTATT+AGG | - | chr1.2:70714363-70714382 | None:intergenic | 20.0% |
| !! | TGTATCATAAATTATGAACT+TGG | - | chr1.2:70715337-70715356 | None:intergenic | 20.0% |
| !! | TTAAATAGTGAGATCTAATT+GGG | + | chr1.2:70715143-70715162 | MS.gene60683:intron | 20.0% |
| !! | TTATAATATTTAGTGTGCAA+AGG | - | chr1.2:70714175-70714194 | None:intergenic | 20.0% |
| !! | TTTAAATAGTGAGATCTAAT+TGG | + | chr1.2:70715142-70715161 | MS.gene60683:intron | 20.0% |
| !!! | AGAAACTTTTCATTTTCATA+TGG | - | chr1.2:70714602-70714621 | None:intergenic | 20.0% |
| !!! | ATATTATAAAATTTAGAGCC+TGG | + | chr1.2:70714186-70714205 | MS.gene60683:intron | 20.0% |
| !!! | ATTTTTCGTAAAGTAATTCT+TGG | - | chr1.2:70715235-70715254 | None:intergenic | 20.0% |
| !!! | TGAATTTAATTTGTATGCAT+TGG | + | chr1.2:70715033-70715052 | MS.gene60683:intron | 20.0% |
| !!! | TTTTTCGTAAAGTAATTCTT+GGG | - | chr1.2:70715234-70715253 | None:intergenic | 20.0% |
| ! | ATTGTCTTGTAAAAAGTTGA+TGG | + | chr1.2:70714995-70715014 | MS.gene60683:intron | 25.0% |
| !! | TGTGTAAAATTGGTTTACAT+TGG | + | chr1.2:70715170-70715189 | MS.gene60683:intron | 25.0% |
| !!! | AATTTTTAGATCTGGTTTGT+CGG | + | chr1.2:70714723-70714742 | MS.gene60683:intron | 25.0% |
| !!! | ATATGGACTCTATTTGTTTT+AGG | + | chr1.2:70714541-70714560 | MS.gene60683:intron | 25.0% |
| AAAGAGAAAGTTGAATTGCT+TGG | - | chr1.2:70714487-70714506 | None:intergenic | 30.0% | |
| AAGAAAATTAGACCTGAAAG+AGG | - | chr1.2:70715310-70715329 | None:intergenic | 30.0% | |
| ACTGAAGAATAATCTTGTCA+TGG | - | chr1.2:70715911-70715930 | None:intergenic | 30.0% | |
| CACAGAGTATGTTATATCAA+TGG | + | chr1.2:70714836-70714855 | MS.gene60683:CDS | 30.0% | |
| CACATGCACAAATATCTAAT+TGG | - | chr1.2:70715100-70715119 | None:intergenic | 30.0% | |
| CATAAATGAAAAATTAGGCC+AGG | - | chr1.2:70714207-70714226 | None:intergenic | 30.0% | |
| GACAAGATTATTCTTCAGTT+CGG | + | chr1.2:70715912-70715931 | MS.gene60683:CDS | 30.0% | |
| GCATGGACAATAAGAAATAT+TGG | - | chr1.2:70714580-70714599 | None:intergenic | 30.0% | |
| GTTATGATATACTCTGTCTA+TGG | - | chr1.2:70714964-70714983 | None:intergenic | 30.0% | |
| TAGATATTTGTGCATGTGTA+GGG | + | chr1.2:70715102-70715121 | MS.gene60683:intron | 30.0% | |
| TATTAACTTTCTCCTCTTTC+AGG | + | chr1.2:70715295-70715314 | MS.gene60683:intron | 30.0% | |
| TCGTGATGTTATTAAGAGAT+TGG | + | chr1.2:70713788-70713807 | MS.gene60683:CDS | 30.0% | |
| TGGTTAATGAGTTTCAGTTA+AGG | + | chr1.2:70714003-70714022 | MS.gene60683:intron | 30.0% | |
| TGTAGGTTCTCAGATATAAT+GGG | + | chr1.2:70715663-70715682 | MS.gene60683:CDS | 30.0% | |
| TTAGATATTTGTGCATGTGT+AGG | + | chr1.2:70715101-70715120 | MS.gene60683:intron | 30.0% | |
| ! | CTTTTCATTTTCATATGGCA+TGG | - | chr1.2:70714597-70714616 | None:intergenic | 30.0% |
| !! | TCTTTCAGGTCTAATTTTCT+TGG | + | chr1.2:70715309-70715328 | MS.gene60683:intron | 30.0% |
| !!! | CATTTTGTTTTCGATCTGTT+TGG | + | chr1.2:70714924-70714943 | MS.gene60683:intron | 30.0% |
| !!! | CTTTTTTCGAGTTGAATCTA+CGG | - | chr1.2:70715404-70715423 | None:intergenic | 30.0% |
| !!! | TGTTGATTTTGTTTTACAGC+CGG | + | chr1.2:70714232-70714251 | MS.gene60683:intron | 30.0% |
| ACCCTAACTGTAACAATCAT+TGG | + | chr1.2:70714055-70714074 | MS.gene60683:intron | 35.0% | |
| AGATCCAGTAACACTTACAT+CGG | + | chr1.2:70714876-70714895 | MS.gene60683:CDS | 35.0% | |
| ATCGTGCAAAGGATAAACTA+CGG | - | chr1.2:70715614-70715633 | None:intergenic | 35.0% | |
| ATTCTTCAGTTCGGTAAAGT+CGG | + | chr1.2:70715921-70715940 | MS.gene60683:CDS | 35.0% | |
| CTCGAAAAAAGTTTCACCAA+AGG | + | chr1.2:70715413-70715432 | MS.gene60683:CDS | 35.0% | |
| CTGTAGGTTCTCAGATATAA+TGG | + | chr1.2:70715662-70715681 | MS.gene60683:CDS | 35.0% | |
| GCCAATGATTGTTACAGTTA+GGG | - | chr1.2:70714059-70714078 | None:intergenic | 35.0% | |
| GTAAAGTAATTCTTGGGTGA+TGG | - | chr1.2:70715228-70715247 | None:intergenic | 35.0% | |
| TAATTCTGCTGAACTGCATA+TGG | + | chr1.2:70714524-70714543 | MS.gene60683:intron | 35.0% | |
| TAGTATTGTTCGTGATGTGA+GGG | + | chr1.2:70713617-70713636 | MS.gene60683:CDS | 35.0% | |
| TCAACAAAGTAAAGCTTACC+AGG | - | chr1.2:70714338-70714357 | None:intergenic | 35.0% | |
| TCAACACTCTTGAATACTGT+GGG | + | chr1.2:70713901-70713920 | MS.gene60683:CDS | 35.0% | |
| TTAAGAACAAGTCTCCTAGA+TGG | + | chr1.2:70715733-70715752 | MS.gene60683:CDS | 35.0% | |
| TTACAGTTAGGGTTCAAAGT+CGG | - | chr1.2:70714048-70714067 | None:intergenic | 35.0% | |
| TTATGAGTTATCGCATTTCG+TGG | + | chr1.2:70714433-70714452 | MS.gene60683:intron | 35.0% | |
| TTCTATCTTACTTTGCGTGT+TGG | + | chr1.2:70714618-70714637 | MS.gene60683:intron | 35.0% | |
| ! | AATGTTGGTGCCTTAACTTT+AGG | + | chr1.2:70715769-70715788 | MS.gene60683:CDS | 35.0% |
| ! | ATGTTGGTGCCTTAACTTTA+GGG | + | chr1.2:70715770-70715789 | MS.gene60683:CDS | 35.0% |
| ! | CTTTTGATGAAACACTGGAT+GGG | - | chr1.2:70714272-70714291 | None:intergenic | 35.0% |
| ! | GACTTGTTCTTAAGAACTAG+AGG | - | chr1.2:70715726-70715745 | None:intergenic | 35.0% |
| ! | TCTTTTGATGAAACACTGGA+TGG | - | chr1.2:70714273-70714292 | None:intergenic | 35.0% |
| ! | TGTCTCTTTTGATGAAACAC+TGG | - | chr1.2:70714277-70714296 | None:intergenic | 35.0% |
| !!! | GGTTCAATTTTTTGCTATGC+TGG | + | chr1.2:70714639-70714658 | MS.gene60683:intron | 35.0% |
| !!! | GTTGATTTTGTTTTACAGCC+GGG | + | chr1.2:70714233-70714252 | MS.gene60683:intron | 35.0% |
| !!! | TTGATTTTGTTTTACAGCCG+GGG | + | chr1.2:70714234-70714253 | MS.gene60683:intron | 35.0% |
| AAAGAATCCTCAAGATTGCG+GGG | - | chr1.2:70715591-70715610 | None:intergenic | 40.0% | |
| AACGACAGGGTTAAGACAAA+AGG | + | chr1.2:70714128-70714147 | MS.gene60683:intron | 40.0% | |
| ACACTTACATCGGAAAGCTT+AGG | + | chr1.2:70714886-70714905 | MS.gene60683:CDS | 40.0% | |
| ACATATCGCAAATGCCTGAA+AGG | - | chr1.2:70715988-70716007 | None:intergenic | 40.0% | |
| ACCAAGGACATTCAACTCAT+AGG | - | chr1.2:70715472-70715491 | None:intergenic | 40.0% | |
| AGCCAGCTGAGCATTATTAT+AGG | - | chr1.2:70715367-70715386 | None:intergenic | 40.0% | |
| AGCTGAGCATTATTATAGGG+AGG | - | chr1.2:70715363-70715382 | None:intergenic | 40.0% | |
| AGTTATACAGAACAGCCCAT+GGG | + | chr1.2:70713743-70713762 | MS.gene60683:CDS | 40.0% | |
| ATAACATCACGAAGAAGCTC+CGG | - | chr1.2:70713780-70713799 | None:intergenic | 40.0% | |
| ATAGTGCAATTCATCCTTCG+TGG | - | chr1.2:70715504-70715523 | None:intergenic | 40.0% | |
| ATGGATTTGGAAGCTTATCG+AGG | + | chr1.2:70713640-70713659 | MS.gene60683:CDS | 40.0% | |
| ATTCAACTCATAGGTGACCT+GGG | - | chr1.2:70715463-70715482 | None:intergenic | 40.0% | |
| ATTGGGCGTCTGTGTAAAAT+TGG | + | chr1.2:70715160-70715179 | MS.gene60683:intron | 40.0% | |
| CGCCAATGATTGTTACAGTT+AGG | - | chr1.2:70714060-70714079 | None:intergenic | 40.0% | |
| CTTTCCGATGTAAGTGTTAC+TGG | - | chr1.2:70714883-70714902 | None:intergenic | 40.0% | |
| GAAAGAATCCTCAAGATTGC+GGG | - | chr1.2:70715592-70715611 | None:intergenic | 40.0% | |
| GCCAGCTGAGCATTATTATA+GGG | - | chr1.2:70715366-70715385 | None:intergenic | 40.0% | |
| GGAAAGAATCCTCAAGATTG+CGG | - | chr1.2:70715593-70715612 | None:intergenic | 40.0% | |
| GTAGTATTGTTCGTGATGTG+AGG | + | chr1.2:70713616-70713635 | MS.gene60683:CDS | 40.0% | |
| GTCAACACTCTTGAATACTG+TGG | + | chr1.2:70713900-70713919 | MS.gene60683:CDS | 40.0% | |
| TACATCGGAAAGCTTAGGTA+TGG | + | chr1.2:70714891-70714910 | MS.gene60683:intron | 40.0% | |
| TAGTGCAATTCATCCTTCGT+GGG | - | chr1.2:70715503-70715522 | None:intergenic | 40.0% | |
| TCCCTATAATAATGCTCAGC+TGG | + | chr1.2:70715362-70715381 | MS.gene60683:CDS | 40.0% | |
| TTGAATGTCCTTGGTACTAG+AGG | + | chr1.2:70715477-70715496 | MS.gene60683:CDS | 40.0% | |
| ! | ACCTATGAGTTGAATGTCCT+TGG | + | chr1.2:70715468-70715487 | MS.gene60683:CDS | 40.0% |
| ! | GCAGCATTGCTTGTTGAAAA+TGG | + | chr1.2:70714771-70714790 | MS.gene60683:intron | 40.0% |
| ! | GTTATCGATTGATCGTGCAA+AGG | - | chr1.2:70715625-70715644 | None:intergenic | 40.0% |
| ! | TGTTGGTGCCTTAACTTTAG+GGG | + | chr1.2:70715771-70715790 | MS.gene60683:CDS | 40.0% |
| ! | TTCTCAGATATAATGGGAGC+TGG | + | chr1.2:70715669-70715688 | MS.gene60683:CDS | 40.0% |
| ! | TTTTCAACAAGCAATGCTGC+AGG | - | chr1.2:70714771-70714790 | None:intergenic | 40.0% |
| AAGGCTTCCTGGACATCAAA+GGG | + | chr1.2:70713677-70713696 | MS.gene60683:CDS | 45.0% | |
| AATCTCCTGACCGATTACCA+GGG | + | chr1.2:70714091-70714110 | MS.gene60683:intron | 45.0% | |
| AGTAAAGCTTACCAGGACTG+AGG | - | chr1.2:70714331-70714350 | None:intergenic | 45.0% | |
| ATTGTTCGTGATGTGAGGGA+TGG | + | chr1.2:70713621-70713640 | MS.gene60683:CDS | 45.0% | |
| CAACTGAGTTTAGCAGCTGT+AGG | + | chr1.2:70715646-70715665 | MS.gene60683:CDS | 45.0% | |
| CAGTTATACAGAACAGCCCA+TGG | + | chr1.2:70713742-70713761 | MS.gene60683:CDS | 45.0% | |
| CATTCAACTCATAGGTGACC+TGG | - | chr1.2:70715464-70715483 | None:intergenic | 45.0% | |
| CGATGTTGTAACTGCCACTA+GGG | - | chr1.2:70715440-70715459 | None:intergenic | 45.0% | |
| CGGCAAGGATATGTTTACGA+TGG | + | chr1.2:70715941-70715960 | MS.gene60683:CDS | 45.0% | |
| GATTTGGAAGCTTATCGAGG+CGG | + | chr1.2:70713643-70713662 | MS.gene60683:CDS | 45.0% | |
| TAAGGCTTCCTGGACATCAA+AGG | + | chr1.2:70713676-70713695 | MS.gene60683:CDS | 45.0% | |
| TAATCTCCTGACCGATTACC+AGG | + | chr1.2:70714090-70714109 | MS.gene60683:intron | 45.0% | |
| TCACACGTCCCCTAAAGTTA+AGG | - | chr1.2:70715782-70715801 | None:intergenic | 45.0% | |
| TCACCTGCTTCAGAGAAACA+GGG | - | chr1.2:70713938-70713957 | None:intergenic | 45.0% | |
| ! | CATGGGCTGTTCTGTATAAC+TGG | - | chr1.2:70713744-70713763 | None:intergenic | 45.0% |
| ! | GAGGTTGATCATGCAACTCA+TGG | - | chr1.2:70713722-70713741 | None:intergenic | 45.0% |
| ! | TGTTTTACAGCCGGGGTATA+GGG | + | chr1.2:70714241-70714260 | MS.gene60683:intron | 45.0% |
| !! | TGGAAGCAACTGAGAGTACT+TGG | + | chr1.2:70713808-70713827 | MS.gene60683:CDS | 45.0% |
| !! | TTGTTTTACAGCCGGGGTAT+AGG | + | chr1.2:70714240-70714259 | MS.gene60683:intron | 45.0% |
| !! | TTTCCCTGTTTCTCTGAAGC+AGG | + | chr1.2:70713932-70713951 | MS.gene60683:CDS | 45.0% |
| !!! | AGTTTTGAGGTAAGGCTTCC+TGG | + | chr1.2:70713666-70713685 | MS.gene60683:CDS | 45.0% |
| AGGCTTCCTGGACATCAAAG+GGG | + | chr1.2:70713678-70713697 | MS.gene60683:CDS | 50.0% | |
| ATCTCCTGACCGATTACCAG+GGG | + | chr1.2:70714092-70714111 | MS.gene60683:intron | 50.0% | |
| CTCACCTGCTTCAGAGAAAC+AGG | - | chr1.2:70713939-70713958 | None:intergenic | 50.0% | |
| CTCTGTGCAAGTCGTTCTTC+TGG | - | chr1.2:70714823-70714842 | None:intergenic | 50.0% | |
| GCGATGTTGTAACTGCCACT+AGG | - | chr1.2:70715441-70715460 | None:intergenic | 50.0% | |
| GGACTATCGATACCCTCTCT+CGG | + | chr1.2:70715962-70715981 | MS.gene60683:CDS | 50.0% | |
| GGCATGAACAGCTGCAATGT+TGG | + | chr1.2:70715754-70715773 | MS.gene60683:CDS | 50.0% | |
| GGGCTGTTCTGTATAACTGG+AGG | - | chr1.2:70713741-70713760 | None:intergenic | 50.0% | |
| GTTTCACCAAAGGTCCCTAG+TGG | + | chr1.2:70715423-70715442 | MS.gene60683:CDS | 50.0% | |
| TAACTGCCACTAGGGACCTT+TGG | - | chr1.2:70715432-70715451 | None:intergenic | 50.0% | |
| TCAGTTCGGTAAAGTCGGCA+AGG | + | chr1.2:70715926-70715945 | MS.gene60683:CDS | 50.0% | |
| TCTTAACCCTGTCGTTCCCA+GGG | - | chr1.2:70714124-70714143 | None:intergenic | 50.0% | |
| TGCAGCTGTTCATGCCATCT+AGG | - | chr1.2:70715750-70715769 | None:intergenic | 50.0% | |
| TTGTCATGGTCTGACTGTGC+TGG | - | chr1.2:70715897-70715916 | None:intergenic | 50.0% | |
| ! | CGTGATGTGAGGGATGGATT+TGG | + | chr1.2:70713627-70713646 | MS.gene60683:CDS | 50.0% |
| ! | CTTATCGAGGCGGAGTTTTG+AGG | + | chr1.2:70713653-70713672 | MS.gene60683:CDS | 50.0% |
| AAGGGGCAAGTCGCGTAGTT+CGG | + | chr1.2:70713695-70713714 | MS.gene60683:CDS | 55.0% | |
| AATGCCTGAAAGGCCGAGAG+AGG | - | chr1.2:70715978-70715997 | None:intergenic | 55.0% | |
| ACATCACGAAGAAGCTCCGG+TGG | - | chr1.2:70713777-70713796 | None:intergenic | 55.0% | |
| AGATTGCGGGGAATGAGCTC+TGG | - | chr1.2:70715579-70715598 | None:intergenic | 55.0% | |
| AGCTGGCAATGAAGACGAGG+AGG | + | chr1.2:70715686-70715705 | MS.gene60683:CDS | 55.0% | |
| ATACCCTCTCTCGGCCTTTC+AGG | + | chr1.2:70715971-70715990 | MS.gene60683:CDS | 55.0% | |
| ATGCCTGAAAGGCCGAGAGA+GGG | - | chr1.2:70715977-70715996 | None:intergenic | 55.0% | |
| ATGGGTCCATCCCTATACCC+CGG | - | chr1.2:70714254-70714273 | None:intergenic | 55.0% | |
| CAGGACTGAGGCAAAGGAAG+AGG | - | chr1.2:70714319-70714338 | None:intergenic | 55.0% | |
| CTCTTCCTTTGCCTCAGTCC+TGG | + | chr1.2:70714317-70714336 | MS.gene60683:CDS | 55.0% | |
| CTGGCAATGAAGACGAGGAG+GGG | + | chr1.2:70715688-70715707 | MS.gene60683:CDS | 55.0% | |
| CTTAACCCTGTCGTTCCCAG+GGG | - | chr1.2:70714123-70714142 | None:intergenic | 55.0% | |
| GACTGAGGCAAAGGAAGAGG+TGG | - | chr1.2:70714316-70714335 | None:intergenic | 55.0% | |
| GACTTGCCCCTTTGATGTCC+AGG | - | chr1.2:70713687-70713706 | None:intergenic | 55.0% | |
| GCAACCACATGCTTACGACC+AGG | - | chr1.2:70713834-70713853 | None:intergenic | 55.0% | |
| GCATGTGGTTGCTTGTGCTG+CGG | + | chr1.2:70713842-70713861 | MS.gene60683:CDS | 55.0% | |
| GCTCATTCCCCGCAATCTTG+AGG | + | chr1.2:70715581-70715600 | MS.gene60683:CDS | 55.0% | |
| GCTGGCAATGAAGACGAGGA+GGG | + | chr1.2:70715687-70715706 | MS.gene60683:CDS | 55.0% | |
| GCTTACCAGGACTGAGGCAA+AGG | - | chr1.2:70714325-70714344 | None:intergenic | 55.0% | |
| GTCTTAACCCTGTCGTTCCC+AGG | - | chr1.2:70714125-70714144 | None:intergenic | 55.0% | |
| TGGCAATGAAGACGAGGAGG+GGG | + | chr1.2:70715689-70715708 | MS.gene60683:CDS | 55.0% | |
| TGGCAGTTACAACATCGCCC+AGG | + | chr1.2:70715443-70715462 | MS.gene60683:CDS | 55.0% | |
| TTACAGCCGGGGTATAGGGA+TGG | + | chr1.2:70714245-70714264 | MS.gene60683:intron | 55.0% | |
| TTCGTGGGCCTCTAGTACCA+AGG | - | chr1.2:70715488-70715507 | None:intergenic | 55.0% | |
| TTGAATCTACGGCTGCGTCC+AGG | - | chr1.2:70715393-70715412 | None:intergenic | 55.0% | |
| TTGGCCTGGTCGTAAGCATG+TGG | + | chr1.2:70713827-70713846 | MS.gene60683:CDS | 55.0% | |
| TTGGTACTAGAGGCCCACGA+AGG | + | chr1.2:70715487-70715506 | MS.gene60683:CDS | 55.0% | |
| !! | GCAACTGAGAGTACTTGGCC+TGG | + | chr1.2:70713813-70713832 | MS.gene60683:CDS | 55.0% |
| !!! | CGAGGCGGAGTTTTGAGGTA+AGG | + | chr1.2:70713658-70713677 | MS.gene60683:CDS | 55.0% |
| AAGGCCCCTGGTAATCGGTC+AGG | - | chr1.2:70714099-70714118 | None:intergenic | 60.0% | |
| AATCTACGGCTGCGTCCAGG+AGG | - | chr1.2:70715390-70715409 | None:intergenic | 60.0% | |
| ACCAGGCTCGAGGGATGAAG+CGG | - | chr1.2:70715538-70715557 | None:intergenic | 60.0% | |
| ATTACCAGGGGCCTTTCCCC+TGG | + | chr1.2:70714104-70714123 | MS.gene60683:intron | 60.0% | |
| CACGAAGAAGCTCCGGTGGA+AGG | - | chr1.2:70713773-70713792 | None:intergenic | 60.0% | |
| CCTTTCCCCTGGGAACGACA+GGG | + | chr1.2:70714115-70714134 | MS.gene60683:intron | 60.0% | |
| GACAACACCACCAGGCTCGA+GGG | - | chr1.2:70715547-70715566 | None:intergenic | 60.0% | |
| GCAATGAAGACGAGGAGGGG+GGG | + | chr1.2:70715691-70715710 | MS.gene60683:CDS | 60.0% | |
| GGCAATGAAGACGAGGAGGG+GGG | + | chr1.2:70715690-70715709 | MS.gene60683:CDS | 60.0% | |
| GGGAGCTGGCAATGAAGACG+AGG | + | chr1.2:70715683-70715702 | MS.gene60683:CDS | 60.0% | |
| GGGGAAAGGCCCCTGGTAAT+CGG | - | chr1.2:70714104-70714123 | None:intergenic | 60.0% | |
| TTACCAGGGGCCTTTCCCCT+GGG | + | chr1.2:70714105-70714124 | MS.gene60683:intron | 60.0% | |
| ! | AATGCTCAGCTGGCTCCTCC+TGG | + | chr1.2:70715372-70715391 | MS.gene60683:CDS | 60.0% |
| !! | GAATGAGCTCTGGCTGGCCT+GGG | - | chr1.2:70715569-70715588 | None:intergenic | 60.0% |
| !! | TCTGACTGTGCTGGCTGCGA+CGG | - | chr1.2:70715888-70715907 | None:intergenic | 60.0% |
| CAGGCTCGAGGGATGAAGCG+GGG | - | chr1.2:70715536-70715555 | None:intergenic | 65.0% | |
| CCAGGCTCGAGGGATGAAGC+GGG | - | chr1.2:70715537-70715556 | None:intergenic | 65.0% | |
| CCCTGTCGTTCCCAGGGGAA+AGG | - | chr1.2:70714118-70714137 | None:intergenic | 65.0% | |
| CGACGGTGCAGGTCCTGTTG+CGG | - | chr1.2:70715871-70715890 | None:intergenic | 65.0% | |
| GCAGGTCCTGTTGCGGCATG+AGG | - | chr1.2:70715864-70715883 | None:intergenic | 65.0% | |
| GCATGAGGAGCGACAGGTGC+AGG | - | chr1.2:70715849-70715868 | None:intergenic | 65.0% | |
| GCCTTTCCCCTGGGAACGAC+AGG | + | chr1.2:70714114-70714133 | MS.gene60683:intron | 65.0% | |
| GCTTCATCCCTCGAGCCTGG+TGG | + | chr1.2:70715537-70715556 | MS.gene60683:CDS | 65.0% | |
| GGACAACACCACCAGGCTCG+AGG | - | chr1.2:70715548-70715567 | None:intergenic | 65.0% | |
| GTCGCTCCTCATGCCGCAAC+AGG | + | chr1.2:70715855-70715874 | MS.gene60683:CDS | 65.0% | |
| GTGCTGCGGTCTGCAAGTCG+TGG | + | chr1.2:70713856-70713875 | MS.gene60683:CDS | 65.0% | |
| GTTGCGGCATGAGGAGCGAC+AGG | - | chr1.2:70715855-70715874 | None:intergenic | 65.0% | |
| TGAAGACGAGGAGGGGGGGA+AGG | + | chr1.2:70715695-70715714 | MS.gene60683:CDS | 65.0% | |
| TGGCCTGGGACAACACCACC+AGG | - | chr1.2:70715555-70715574 | None:intergenic | 65.0% | |
| ! | CCGGTGGAAGGCTAGCCCAT+GGG | - | chr1.2:70713761-70713780 | None:intergenic | 65.0% |
| ! | GGAATGAGCTCTGGCTGGCC+TGG | - | chr1.2:70715570-70715589 | None:intergenic | 65.0% |
| ! | TCCGGTGGAAGGCTAGCCCA+TGG | - | chr1.2:70713762-70713781 | None:intergenic | 65.0% |
| ! | TGCGGGGAATGAGCTCTGGC+TGG | - | chr1.2:70715575-70715594 | None:intergenic | 65.0% |
| !! | CCCATGGGCTAGCCTTCCAC+CGG | + | chr1.2:70713758-70713777 | MS.gene60683:CDS | 65.0% |
| !! | GAGCCTGGTGGTGTTGTCCC+AGG | + | chr1.2:70715549-70715568 | MS.gene60683:CDS | 65.0% |
| CCCGCTTCATCCCTCGAGCC+TGG | + | chr1.2:70715534-70715553 | MS.gene60683:CDS | 70.0% | |
| GTTCCCAGGGGAAAGGCCCC+TGG | - | chr1.2:70714111-70714130 | None:intergenic | 70.0% | |
| !! | TGTGCTGGCTGCGACGGTGC+AGG | - | chr1.2:70715882-70715901 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 70713606 | 70716043 | 70713606 | ID=MS.gene60683 |
| chr1.2 | mRNA | 70713606 | 70716043 | 70713606 | ID=MS.gene60683.t1;Parent=MS.gene60683 |
| chr1.2 | exon | 70713606 | 70713953 | 70713606 | ID=MS.gene60683.t1.exon1;Parent=MS.gene60683.t1 |
| chr1.2 | CDS | 70713606 | 70713953 | 70713606 | ID=cds.MS.gene60683.t1;Parent=MS.gene60683.t1 |
| chr1.2 | exon | 70714251 | 70714338 | 70714251 | ID=MS.gene60683.t1.exon2;Parent=MS.gene60683.t1 |
| chr1.2 | CDS | 70714251 | 70714338 | 70714251 | ID=cds.MS.gene60683.t1;Parent=MS.gene60683.t1 |
| chr1.2 | exon | 70714775 | 70714907 | 70714775 | ID=MS.gene60683.t1.exon3;Parent=MS.gene60683.t1 |
| chr1.2 | CDS | 70714775 | 70714907 | 70714775 | ID=cds.MS.gene60683.t1;Parent=MS.gene60683.t1 |
| chr1.2 | exon | 70715317 | 70716043 | 70715317 | ID=MS.gene60683.t1.exon4;Parent=MS.gene60683.t1 |
| chr1.2 | CDS | 70715317 | 70716043 | 70715317 | ID=cds.MS.gene60683.t1;Parent=MS.gene60683.t1 |
| Gene Sequence |
| Protein sequence |
