Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62160.t1 | XP_003600780.1 | 97.1 | 487 | 14 | 0 | 1 | 487 | 86 | 572 | 1.10E-277 | 965.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62160.t1 | Q39033 | 71.3 | 491 | 127 | 4 | 1 | 487 | 101 | 581 | 1.8e-209 | 729.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62160.t1 | G7JA07 | 97.1 | 487 | 14 | 0 | 1 | 487 | 86 | 572 | 7.7e-278 | 965.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene62160 | 0.808534 | 2.95E-50 | -1.69E-46 |
| MS.gene050426 | MS.gene62160 | -0.819182 | 1.33E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene62160 | 0.803968 | 2.71E-49 | -1.69E-46 |
| MS.gene050971 | MS.gene62160 | 0.812911 | 3.34E-51 | -1.69E-46 |
| MS.gene052077 | MS.gene62160 | 0.813335 | 2.70E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene62160 | 0.823124 | 1.64E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene62160 | 0.824788 | 6.68E-54 | -1.69E-46 |
| MS.gene052414 | MS.gene62160 | 0.803988 | 2.68E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene62160 | 0.809464 | 1.87E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene62160 | 0.807188 | 5.71E-50 | -1.69E-46 |
| MS.gene054349 | MS.gene62160 | 0.812793 | 3.55E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene62160 | 0.851446 | 8.83E-61 | -1.69E-46 |
| MS.gene055666 | MS.gene62160 | 0.811274 | 7.60E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene62160 | 0.825326 | 4.98E-54 | -1.69E-46 |
| MS.gene056659 | MS.gene62160 | 0.809952 | 1.47E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene62160 | 0.801513 | 8.69E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene62160 | 0.841504 | 4.57E-58 | -1.69E-46 |
| MS.gene057823 | MS.gene62160 | 0.850456 | 1.68E-60 | -1.69E-46 |
| MS.gene058710 | MS.gene62160 | 0.807445 | 5.04E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene62160 | 0.823373 | 1.43E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene62160 | 0.827192 | 1.79E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene62160 | 0.80035 | 1.50E-48 | -1.69E-46 |
| MS.gene059420 | MS.gene62160 | 0.837802 | 4.19E-57 | -1.69E-46 |
| MS.gene059676 | MS.gene62160 | 0.81982 | 9.50E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene62160 | 0.801324 | 9.50E-49 | -1.69E-46 |
| MS.gene059894 | MS.gene62160 | 0.804631 | 1.97E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene62160 | 0.80401 | 2.65E-49 | -1.69E-46 |
| MS.gene060407 | MS.gene62160 | 0.800766 | 1.24E-48 | -1.69E-46 |
| MS.gene061049 | MS.gene62160 | 0.80557 | 1.25E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene62160 | -0.813487 | 2.50E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene62160 | 0.80433 | 2.28E-49 | -1.69E-46 |
| MS.gene061159 | MS.gene62160 | 0.802297 | 6.00E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62160.t1 | MTR_3g069280 | 98.563 | 487 | 7 | 0 | 1 | 487 | 86 | 572 | 0.0 | 999 |
| MS.gene62160.t1 | MTR_3g070720 | 96.099 | 487 | 17 | 1 | 1 | 487 | 109 | 593 | 0.0 | 976 |
| MS.gene62160.t1 | MTR_5g082620 | 77.823 | 487 | 106 | 2 | 1 | 486 | 103 | 588 | 0.0 | 801 |
| MS.gene62160.t1 | MTR_3g070720 | 96.675 | 391 | 11 | 1 | 1 | 391 | 109 | 497 | 0.0 | 785 |
| MS.gene62160.t1 | MTR_3g070720 | 96.685 | 362 | 10 | 1 | 1 | 362 | 109 | 468 | 0.0 | 720 |
| MS.gene62160.t1 | MTR_5g071010 | 67.280 | 489 | 156 | 2 | 1 | 487 | 108 | 594 | 0.0 | 692 |
| MS.gene62160.t1 | MTR_5g082590 | 65.432 | 486 | 156 | 5 | 1 | 486 | 108 | 581 | 0.0 | 650 |
| MS.gene62160.t1 | MTR_3g070720 | 96.774 | 310 | 8 | 1 | 1 | 310 | 109 | 416 | 0.0 | 613 |
| MS.gene62160.t1 | MTR_3g070560 | 55.441 | 487 | 208 | 5 | 1 | 486 | 109 | 587 | 0.0 | 551 |
| MS.gene62160.t1 | MTR_3g070710 | 55.441 | 487 | 206 | 4 | 1 | 486 | 110 | 586 | 0.0 | 546 |
| MS.gene62160.t1 | MTR_5g082580 | 54.418 | 498 | 205 | 5 | 1 | 486 | 119 | 606 | 0.0 | 546 |
| MS.gene62160.t1 | MTR_5g071040 | 54.209 | 487 | 190 | 6 | 1 | 486 | 118 | 572 | 9.20e-177 | 508 |
| MS.gene62160.t1 | MTR_3g070560 | 53.810 | 420 | 186 | 4 | 67 | 486 | 3 | 414 | 3.05e-157 | 453 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62160.t1 | AT3G08510 | 72.951 | 488 | 124 | 3 | 1 | 487 | 101 | 581 | 0.0 | 747 |
| MS.gene62160.t1 | AT3G08510 | 72.951 | 488 | 124 | 3 | 1 | 487 | 101 | 581 | 0.0 | 747 |
| MS.gene62160.t1 | AT3G55940 | 70.204 | 490 | 137 | 4 | 1 | 487 | 101 | 584 | 0.0 | 707 |
| MS.gene62160.t1 | AT3G08510 | 68.238 | 488 | 118 | 4 | 1 | 487 | 101 | 552 | 0.0 | 676 |
| MS.gene62160.t1 | AT3G08510 | 68.238 | 488 | 118 | 4 | 1 | 487 | 101 | 552 | 0.0 | 676 |
| MS.gene62160.t1 | AT2G40116 | 62.910 | 488 | 169 | 3 | 1 | 486 | 135 | 612 | 0.0 | 642 |
| MS.gene62160.t1 | AT5G58700 | 62.857 | 490 | 175 | 4 | 1 | 487 | 112 | 597 | 0.0 | 630 |
| MS.gene62160.t1 | AT5G58700 | 62.857 | 490 | 175 | 4 | 1 | 487 | 112 | 597 | 0.0 | 630 |
| MS.gene62160.t1 | AT5G58700 | 62.857 | 490 | 175 | 4 | 1 | 487 | 4 | 489 | 0.0 | 629 |
| MS.gene62160.t1 | AT5G58690 | 56.364 | 495 | 182 | 3 | 1 | 487 | 110 | 578 | 0.0 | 574 |
| MS.gene62160.t1 | AT5G58690 | 56.364 | 495 | 182 | 3 | 1 | 487 | 91 | 559 | 0.0 | 574 |
| MS.gene62160.t1 | AT5G58690 | 56.364 | 495 | 182 | 3 | 1 | 487 | 110 | 578 | 0.0 | 574 |
| MS.gene62160.t1 | AT5G58670 | 54.620 | 487 | 185 | 3 | 1 | 484 | 103 | 556 | 0.0 | 528 |
| MS.gene62160.t1 | AT4G38530 | 51.753 | 485 | 200 | 6 | 1 | 484 | 104 | 555 | 5.40e-174 | 501 |
| MS.gene62160.t1 | AT3G47290 | 40.246 | 487 | 231 | 8 | 1 | 486 | 103 | 530 | 1.03e-117 | 356 |
| MS.gene62160.t1 | AT3G47290 | 40.125 | 481 | 225 | 9 | 1 | 480 | 103 | 521 | 6.91e-114 | 348 |
| MS.gene62160.t1 | AT3G47220 | 39.673 | 489 | 227 | 10 | 2 | 486 | 106 | 530 | 2.53e-109 | 335 |
Find 117 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTATAATCCATTAAT+TGG | 0.072901 | 3.2:+63124630 | MS.gene62160:CDS |
| ATAATAGTTGGTTGCCTTCT+TGG | 0.178944 | 3.2:+63125790 | MS.gene62160:CDS |
| AGGATCGAAAACCTCATTAT+TGG | 0.216160 | 3.2:-63125052 | None:intergenic |
| CAAATGTTTGACGTCTATTA+AGG | 0.230837 | 3.2:+63123361 | MS.gene62160:CDS |
| CCATGCATCCACCCAATTAA+TGG | 0.240859 | 3.2:-63124642 | None:intergenic |
| TAATTAGGTCACTGTATATA+TGG | 0.245203 | 3.2:+63125228 | MS.gene62160:intron |
| TGGTTCTTTGGCAGGGTTAT+GGG | 0.259926 | 3.2:+63124941 | MS.gene62160:intron |
| TGTAGTCATCTGATGCATTT+TGG | 0.262746 | 3.2:-63123988 | None:intergenic |
| GTGGTTCTTTGGCAGGGTTA+TGG | 0.264327 | 3.2:+63124940 | MS.gene62160:intron |
| CTTAGACGTCTCACTTTATC+AGG | 0.266369 | 3.2:-63124076 | None:intergenic |
| CCCGCTTTCTGTTCCGGAGC+TGG | 0.275180 | 3.2:+63125830 | MS.gene62160:CDS |
| TTTGATGGCAAATGAGCTTT+AGG | 0.277773 | 3.2:-63125072 | None:intergenic |
| CTTATGCAGGTTGGAATTGC+TGG | 0.289356 | 3.2:+63125726 | MS.gene62160:intron |
| TGAATTCCCGCTTTCTGTTC+CGG | 0.306917 | 3.2:+63125824 | MS.gene62160:CDS |
| AGGGTTATGGGAGATCTCTT+TGG | 0.311117 | 3.2:+63124953 | MS.gene62160:intron |
| GGATCGAAAACCTCATTATT+GGG | 0.335505 | 3.2:-63125051 | None:intergenic |
| CTCTGAAGTGCTTCGATGAT+GGG | 0.355533 | 3.2:-63123147 | None:intergenic |
| CTTCGTTGCGTCTGAATATC+CGG | 0.360784 | 3.2:+63123391 | MS.gene62160:CDS |
| CCACCTTACTCCTGATCTTC+AGG | 0.370917 | 3.2:+63123433 | MS.gene62160:CDS |
| GGTCATAATTCATATCTAAC+TGG | 0.373291 | 3.2:+63123093 | MS.gene62160:CDS |
| TAGATGGTTACTCAAACATT+TGG | 0.373406 | 3.2:+63123579 | MS.gene62160:intron |
| ATGTCTGAGAAGGATGATTT+TGG | 0.381957 | 3.2:+63125885 | MS.gene62160:CDS |
| TATATGGCCTAATGACTCTA+AGG | 0.383342 | 3.2:+63123194 | MS.gene62160:CDS |
| CATTCCACTATTCCACCTTT+AGG | 0.387588 | 3.2:-63124040 | None:intergenic |
| GCCACTTTGGCCTGAAGATC+AGG | 0.391390 | 3.2:-63123443 | None:intergenic |
| CGCTTAATTGCTATTCATGC+TGG | 0.391854 | 3.2:+63124013 | MS.gene62160:CDS |
| GAGTGATTGAATTGGATATA+TGG | 0.394919 | 3.2:+63123178 | MS.gene62160:CDS |
| TTTAGGTGATGAAGAAGCTT+GGG | 0.407451 | 3.2:+63123755 | MS.gene62160:CDS |
| TCTCTGAAGTGCTTCGATGA+TGG | 0.421908 | 3.2:-63123148 | None:intergenic |
| AGGTGTTAGAGTGATTGAAT+TGG | 0.428703 | 3.2:+63123170 | MS.gene62160:CDS |
| TCCTACCTCAGAAACCTTGA+AGG | 0.435352 | 3.2:+63123617 | MS.gene62160:CDS |
| AGATTCCGACGAAGCGGAAA+AGG | 0.438270 | 3.2:+63123961 | MS.gene62160:CDS |
| TCACAGAAGAGAAAGCCTTT+AGG | 0.441642 | 3.2:+63123738 | MS.gene62160:CDS |
| TCTTCTAGTGTTATTACAAC+CGG | 0.444726 | 3.2:-63123410 | None:intergenic |
| CATACCCTTGCATAGAAGTC+TGG | 0.448430 | 3.2:-63125304 | None:intergenic |
| TCTCCTTCGCGGGAATGTAA+TGG | 0.452778 | 3.2:-63125960 | None:intergenic |
| GATGATGTTGATGTCCTTCA+TGG | 0.454017 | 3.2:+63123216 | MS.gene62160:CDS |
| CAAATTATAATCCATTAATT+GGG | 0.455647 | 3.2:+63124631 | MS.gene62160:CDS |
| ATGCGAAGCAGCGCCAGCTC+CGG | 0.456222 | 3.2:-63125843 | None:intergenic |
| CATATGGAAAAGAAATTGTC+AGG | 0.456553 | 3.2:+63124134 | MS.gene62160:CDS |
| CCTTGAAGCTAAAGAAGAAA+AGG | 0.464912 | 3.2:+63123704 | MS.gene62160:CDS |
| AAGGTACTCCTTAGGCGGCT+TGG | 0.465613 | 3.2:-63123685 | None:intergenic |
| GAAAAGGCTGCTGAAACATA+TGG | 0.467059 | 3.2:+63124118 | MS.gene62160:CDS |
| CTAACTAACCTGAGCCACTT+TGG | 0.472125 | 3.2:-63123456 | None:intergenic |
| ATAGTACCGCCTCTCAAACT+AGG | 0.474142 | 3.2:-63123789 | None:intergenic |
| GAGGTAATGCGTGTACCTTT+CGG | 0.479808 | 3.2:-63124606 | None:intergenic |
| GACGTCAAACATTTGATAAG+TGG | 0.483251 | 3.2:-63123353 | None:intergenic |
| AGCTAAAGAAGAAAAGGAAA+AGG | 0.484145 | 3.2:+63123710 | MS.gene62160:CDS |
| AACAAAACCGCATCCTCCAT+TGG | 0.486065 | 3.2:-63124998 | None:intergenic |
| CCATTAATTGGGTGGATGCA+TGG | 0.487420 | 3.2:+63124642 | MS.gene62160:CDS |
| TCTTCAGGCCAAAGTGGCTC+AGG | 0.489930 | 3.2:+63123448 | MS.gene62160:CDS |
| TCACATTATTACATATTCAC+TGG | 0.491218 | 3.2:+63123072 | MS.gene62160:CDS |
| CAAAGTCAACAGATAATAGT+TGG | 0.492685 | 3.2:+63125778 | MS.gene62160:CDS |
| AATTAGGTCACTGTATATAT+GGG | 0.492839 | 3.2:+63125229 | MS.gene62160:intron |
| GATGGTTGCATTTAACATGC+AGG | 0.494100 | 3.2:+63124671 | MS.gene62160:CDS |
| CAAGCTTCTTCATCACCTAA+AGG | 0.494465 | 3.2:-63123753 | None:intergenic |
| TTGGTTGCCTTCTTGGAATG+AGG | 0.497276 | 3.2:+63125797 | MS.gene62160:CDS |
| CTTTAGGTGATGAAGAAGCT+TGG | 0.501759 | 3.2:+63123754 | MS.gene62160:CDS |
| TAAAGAAGAAAAGGAAAAGG+AGG | 0.506940 | 3.2:+63123713 | MS.gene62160:CDS |
| TGTCGATGAAGATGATCTTA+AGG | 0.513054 | 3.2:+63123931 | MS.gene62160:CDS |
| TCCTTCAAGGTTTCTGAGGT+AGG | 0.514356 | 3.2:-63123618 | None:intergenic |
| GAAAACTGGTCCCAATAATG+AGG | 0.515061 | 3.2:+63125041 | MS.gene62160:CDS |
| CGGTACTATAGCTGATTACA+AGG | 0.516593 | 3.2:+63123803 | MS.gene62160:CDS |
| GTTGTATTTATCTCCTTCGC+GGG | 0.517351 | 3.2:-63125970 | None:intergenic |
| CAAGGAATGTTTAAAGCCAA+TGG | 0.521167 | 3.2:+63124982 | MS.gene62160:CDS |
| AGGTGAAAGAAATTCCTTCA+AGG | 0.523272 | 3.2:-63123631 | None:intergenic |
| GAAGCCTAAAGGTGGAATAG+TGG | 0.523615 | 3.2:+63124036 | MS.gene62160:CDS |
| TTAGCTTCAAGGTACTCCTT+AGG | 0.524662 | 3.2:-63123693 | None:intergenic |
| TCTGAAGTGCTTCGATGATG+GGG | 0.528251 | 3.2:-63123146 | None:intergenic |
| TGGCCTGAAGATCAGGAGTA+AGG | 0.530572 | 3.2:-63123436 | None:intergenic |
| CATATCAACCAAGCCGCCTA+AGG | 0.532591 | 3.2:+63123677 | MS.gene62160:CDS |
| TGTTGTATTTATCTCCTTCG+CGG | 0.535824 | 3.2:-63125971 | None:intergenic |
| ATTATAATCCATTAATTGGG+TGG | 0.536189 | 3.2:+63124634 | MS.gene62160:CDS |
| TTTAAAGCCAATGGAGGATG+CGG | 0.547215 | 3.2:+63124991 | MS.gene62160:CDS |
| ATTCATGCTGGGAAGCCTAA+AGG | 0.548804 | 3.2:+63124025 | MS.gene62160:CDS |
| GCCAGCTCCGGAACAGAAAG+CGG | 0.549635 | 3.2:-63125831 | None:intergenic |
| AAGTGAGTCACAGCTCGAAA+AGG | 0.551984 | 3.2:+63124102 | MS.gene62160:CDS |
| CCAGCTCCGGAACAGAAAGC+GGG | 0.556338 | 3.2:-63125830 | None:intergenic |
| GCTTAATTGCTATTCATGCT+GGG | 0.557069 | 3.2:+63124014 | MS.gene62160:CDS |
| TAGTACCGCCTCTCAAACTA+GGG | 0.558608 | 3.2:-63123788 | None:intergenic |
| TGAAGATGATCTTAAGGAGG+AGG | 0.558834 | 3.2:+63123937 | MS.gene62160:CDS |
| ACAATGGTAAACTCATATCT+TGG | 0.558961 | 3.2:-63123050 | None:intergenic |
| CGGATATTCAGACGCAACGA+AGG | 0.561402 | 3.2:-63123390 | None:intergenic |
| TAATGGATTATAATTTGATG+AGG | 0.561590 | 3.2:-63124625 | None:intergenic |
| GTGGATGCATGGAGCTCAGA+TGG | 0.561990 | 3.2:+63124653 | MS.gene62160:CDS |
| ACATCATCCTTAGAGTCATT+AGG | 0.562946 | 3.2:-63123201 | None:intergenic |
| TCCTGATCTTCAGGCCAAAG+TGG | 0.568046 | 3.2:+63123442 | MS.gene62160:CDS |
| CCTGTGTGGGAACTAAGAAA+CGG | 0.577952 | 3.2:+63125924 | MS.gene62160:CDS |
| ATCTCCAGACTTCTATGCAA+GGG | 0.579812 | 3.2:+63125300 | MS.gene62160:CDS |
| GCTTCAAGGTACTCCTTAGG+CGG | 0.582171 | 3.2:-63123690 | None:intergenic |
| AGATCTCTTTGGTTGATGCA+AGG | 0.584104 | 3.2:+63124964 | MS.gene62160:CDS |
| CTGAAGTGCTTCGATGATGG+GGG | 0.585163 | 3.2:-63123145 | None:intergenic |
| GTCACTGTATATATGGGAGA+AGG | 0.587116 | 3.2:+63125235 | MS.gene62160:CDS |
| TCAAATACCTCATTCCAAGA+AGG | 0.587279 | 3.2:-63125804 | None:intergenic |
| CATCTCCAGACTTCTATGCA+AGG | 0.588070 | 3.2:+63125299 | MS.gene62160:CDS |
| AAATTCCTTCAAGGTTTCTG+AGG | 0.588145 | 3.2:-63123622 | None:intergenic |
| AAACATTTGATAAGTGGCAC+AGG | 0.590787 | 3.2:-63123347 | None:intergenic |
| GTTCCATTACATTCCCGCGA+AGG | 0.594715 | 3.2:+63125957 | MS.gene62160:CDS |
| GGTAAACTTACATTCCATGA+AGG | 0.597062 | 3.2:-63123230 | None:intergenic |
| TTCTATCTTTAGCAAAACAG+TGG | 0.603639 | 3.2:+63123908 | MS.gene62160:intron |
| CGATGAAGATGATCTTAAGG+AGG | 0.606898 | 3.2:+63123934 | MS.gene62160:CDS |
| AAAGAAGTCCCTAGTTTGAG+AGG | 0.608524 | 3.2:+63123780 | MS.gene62160:CDS |
| AATATGTAATAATGTGACAA+TGG | 0.622860 | 3.2:-63123066 | None:intergenic |
| CCGTTTCTTAGTTCCCACAC+AGG | 0.623175 | 3.2:-63125924 | None:intergenic |
| CTGTATATATGGGAGAAGGA+TGG | 0.631132 | 3.2:+63125239 | MS.gene62160:CDS |
| ACAAACATGCTTACCTGTGT+GGG | 0.631770 | 3.2:+63125911 | MS.gene62160:CDS |
| TGAATATGACATGTCTGAGA+AGG | 0.639315 | 3.2:+63125875 | MS.gene62160:CDS |
| GGAGGAAGATTCCGACGAAG+CGG | 0.646865 | 3.2:+63123955 | MS.gene62160:CDS |
| TTAGGTGATGAAGAAGCTTG+GGG | 0.654802 | 3.2:+63123756 | MS.gene62160:CDS |
| AATAGTGGAATGTCTCAAAG+TGG | 0.664523 | 3.2:+63124051 | MS.gene62160:CDS |
| GACAAACATGCTTACCTGTG+TGG | 0.665048 | 3.2:+63125910 | MS.gene62160:CDS |
| CCTGAAGATCAGGAGTAAGG+TGG | 0.674793 | 3.2:-63123433 | None:intergenic |
| GGAATGTTTAAAGCCAATGG+AGG | 0.677096 | 3.2:+63124985 | MS.gene62160:CDS |
| CATGCTGGGAAGCCTAAAGG+TGG | 0.677747 | 3.2:+63124028 | MS.gene62160:CDS |
| ATATTGCGAGTGTATCCGAA+AGG | 0.679225 | 3.2:+63124591 | MS.gene62160:CDS |
| GAAGTCCCTAGTTTGAGAGG+CGG | 0.688180 | 3.2:+63123783 | MS.gene62160:CDS |
| ATCATCGAAGCACTTCAGAG+AGG | 0.734048 | 3.2:+63123150 | MS.gene62160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTATAATCCATTAATT+GGG | + | chr3.2:63124631-63124650 | MS.gene62160:CDS | 15.0% |
| !! | TCAAATAAAATAATTCATAC+AGG | - | chr3.2:63125354-63125373 | None:intergenic | 15.0% |
| !! | TCAAATTATAATCCATTAAT+TGG | + | chr3.2:63124630-63124649 | MS.gene62160:CDS | 15.0% |
| !! | TTTGATTATGAGTTATTAAA+CGG | - | chr3.2:63124331-63124350 | None:intergenic | 15.0% |
| !!! | TAAGATTTAAGATGATTTAT+GGG | + | chr3.2:63125328-63125347 | MS.gene62160:intron | 15.0% |
| !! | AATATGTAATAATGTGACAA+TGG | - | chr3.2:63123069-63123088 | None:intergenic | 20.0% |
| !! | AATGTTGTATATAAATTGCA+AGG | + | chr3.2:63123840-63123859 | MS.gene62160:intron | 20.0% |
| !! | AGACTTGATTATAATTAACA+AGG | + | chr3.2:63125187-63125206 | MS.gene62160:intron | 20.0% |
| !! | TATCTCATATTTCTTTAATC+CGG | - | chr3.2:63124258-63124277 | None:intergenic | 20.0% |
| !!! | ATGATAAATTATTTTTGCTG+TGG | + | chr3.2:63124917-63124936 | MS.gene62160:intron | 20.0% |
| !!! | CTAAGATTTAAGATGATTTA+TGG | + | chr3.2:63125327-63125346 | MS.gene62160:intron | 20.0% |
| !!! | TAATGGATTATAATTTGATG+AGG | - | chr3.2:63124628-63124647 | None:intergenic | 20.0% |
| !!! | TGATAAATTATTTTTGCTGT+GGG | + | chr3.2:63124918-63124937 | MS.gene62160:intron | 20.0% |
| !!! | TTTTCATAACAGTATCAAAA+GGG | - | chr3.2:63125755-63125774 | None:intergenic | 20.0% |
| !!! | TTTTTCATAACAGTATCAAA+AGG | - | chr3.2:63125756-63125775 | None:intergenic | 20.0% |
| ! | AATAAGTGATAACTTCTCTT+CGG | + | chr3.2:63125670-63125689 | MS.gene62160:intron | 25.0% |
| ! | AATATATGGATGCTATAACT+TGG | - | chr3.2:63125612-63125631 | None:intergenic | 25.0% |
| ! | AATTAGGTCACTGTATATAT+GGG | + | chr3.2:63125229-63125248 | MS.gene62160:intron | 25.0% |
| ! | ATGAGATAAATATTTGTCCT+TGG | + | chr3.2:63124270-63124289 | MS.gene62160:intron | 25.0% |
| ! | ATTATAATCCATTAATTGGG+TGG | + | chr3.2:63124634-63124653 | MS.gene62160:CDS | 25.0% |
| ! | CATTTATATTCAATCAGCTT+TGG | + | chr3.2:63124479-63124498 | MS.gene62160:intron | 25.0% |
| ! | GGAAGAGTTTGAAAAATATA+TGG | - | chr3.2:63125626-63125645 | None:intergenic | 25.0% |
| ! | GGCTACTAATTGAAAATTTA+GGG | + | chr3.2:63124754-63124773 | MS.gene62160:intron | 25.0% |
| ! | GTTGTCATTAGTAAAATACA+TGG | - | chr3.2:63123294-63123313 | None:intergenic | 25.0% |
| ! | TAATTAGGTCACTGTATATA+TGG | + | chr3.2:63125228-63125247 | MS.gene62160:intron | 25.0% |
| ! | TAATTGATAAACTCTTATGC+AGG | + | chr3.2:63125713-63125732 | MS.gene62160:intron | 25.0% |
| ! | TCACATTATTACATATTCAC+TGG | + | chr3.2:63123072-63123091 | MS.gene62160:CDS | 25.0% |
| ! | TGTTGGAGATATAATTCAAA+CGG | - | chr3.2:63123254-63123273 | None:intergenic | 25.0% |
| ! | TTTAATCCGGTAACAATAAA+AGG | - | chr3.2:63124245-63124264 | None:intergenic | 25.0% |
| ! | TTTCCAACTTGACAAAATAA+CGG | + | chr3.2:63124367-63124386 | MS.gene62160:intron | 25.0% |
| !! | GTAACCATCTAAAATTTGAA+CGG | - | chr3.2:63123570-63123589 | None:intergenic | 25.0% |
| !! | TAACCATCTAAAATTTGAAC+GGG | - | chr3.2:63123569-63123588 | None:intergenic | 25.0% |
| !! | TATAATTTTACCTGTTGCAT+TGG | + | chr3.2:63124206-63124225 | MS.gene62160:intron | 25.0% |
| !! | TCTAATTTTGTATGTGAGAT+TGG | + | chr3.2:63123866-63123885 | MS.gene62160:intron | 25.0% |
| !! | TGCTTTTCTTACTCTTAATT+AGG | + | chr3.2:63125213-63125232 | MS.gene62160:intron | 25.0% |
| !! | TTAATGGACGAAAATGATAT+CGG | + | chr3.2:63124416-63124435 | MS.gene62160:intron | 25.0% |
| !! | TTCAATCCTTTTATTGTTAC+CGG | + | chr3.2:63124236-63124255 | MS.gene62160:intron | 25.0% |
| !! | TTTTGTCTTGAATTTCTCTT+TGG | + | chr3.2:63124821-63124840 | MS.gene62160:intron | 25.0% |
| !!! | ATCCTTTTTTTAAGTGAATC+AGG | - | chr3.2:63123654-63123673 | None:intergenic | 25.0% |
| ACAAAATGATGCAATCTTAC+AGG | + | chr3.2:63123312-63123331 | MS.gene62160:intron | 30.0% | |
| ACAATGGTAAACTCATATCT+TGG | - | chr3.2:63123053-63123072 | None:intergenic | 30.0% | |
| AGCTAAAGAAGAAAAGGAAA+AGG | + | chr3.2:63123710-63123729 | MS.gene62160:CDS | 30.0% | |
| ATGAATTCTCGTCAAATTGT+TGG | - | chr3.2:63123271-63123290 | None:intergenic | 30.0% | |
| ATTAAGCTGAAAACAGCTTA+TGG | - | chr3.2:63125443-63125462 | None:intergenic | 30.0% | |
| CAAAGTCAACAGATAATAGT+TGG | + | chr3.2:63125778-63125797 | MS.gene62160:CDS | 30.0% | |
| CAAATGTTTGACGTCTATTA+AGG | + | chr3.2:63123361-63123380 | MS.gene62160:CDS | 30.0% | |
| CACCTGATTCACTTAAAAAA+AGG | + | chr3.2:63123649-63123668 | MS.gene62160:CDS | 30.0% | |
| CATATGGAAAAGAAATTGTC+AGG | + | chr3.2:63124134-63124153 | MS.gene62160:CDS | 30.0% | |
| CGGCTACTAATTGAAAATTT+AGG | + | chr3.2:63124753-63124772 | MS.gene62160:intron | 30.0% | |
| GAGTGATTGAATTGGATATA+TGG | + | chr3.2:63123178-63123197 | MS.gene62160:CDS | 30.0% | |
| GGTCATAATTCATATCTAAC+TGG | + | chr3.2:63123093-63123112 | MS.gene62160:CDS | 30.0% | |
| TAAAGAAGAAAAGGAAAAGG+AGG | + | chr3.2:63123713-63123732 | MS.gene62160:CDS | 30.0% | |
| TAAATATTTGTCCTTGGCAA+TGG | + | chr3.2:63124276-63124295 | MS.gene62160:intron | 30.0% | |
| TAACTTGGAACATAACTGTT+TGG | - | chr3.2:63125597-63125616 | None:intergenic | 30.0% | |
| TAGATGGTTACTCAAACATT+TGG | + | chr3.2:63123579-63123598 | MS.gene62160:intron | 30.0% | |
| TATATAACAAGAAACCTGTG+AGG | + | chr3.2:63124723-63124742 | MS.gene62160:intron | 30.0% | |
| TTCATATCTAATAGACTGCA+AGG | - | chr3.2:63125647-63125666 | None:intergenic | 30.0% | |
| TTCTATCTTTAGCAAAACAG+TGG | + | chr3.2:63123908-63123927 | MS.gene62160:intron | 30.0% | |
| ! | AACCATCTAAAATTTGAACG+GGG | - | chr3.2:63123568-63123587 | None:intergenic | 30.0% |
| ! | ACCTTCAAAGTAGTTTTTGA+TGG | - | chr3.2:63125090-63125109 | None:intergenic | 30.0% |
| ! | ATTTTGTATGTGAGATTGGT+TGG | + | chr3.2:63123870-63123889 | MS.gene62160:intron | 30.0% |
| ! | CCAGTTTTCAATAGAAAATC+AGG | - | chr3.2:63125030-63125049 | None:intergenic | 30.0% |
| ! | CCTGATTTTCTATTGAAAAC+TGG | + | chr3.2:63125027-63125046 | MS.gene62160:CDS | 30.0% |
| ! | TCTTCTAGTGTTATTACAAC+CGG | - | chr3.2:63123413-63123432 | None:intergenic | 30.0% |
| ! | TTGAGTAGTGACTTTTACAA+GGG | + | chr3.2:63125132-63125151 | MS.gene62160:intron | 30.0% |
| ! | TTTGAGTAGTGACTTTTACA+AGG | + | chr3.2:63125131-63125150 | MS.gene62160:intron | 30.0% |
| !! | TTTCCGTTATTTTGTCAAGT+TGG | - | chr3.2:63124373-63124392 | None:intergenic | 30.0% |
| !!! | TAAATTATTTTTGCTGTGGG+TGG | + | chr3.2:63124921-63124940 | MS.gene62160:intron | 30.0% |
| AAACATTTGATAAGTGGCAC+AGG | - | chr3.2:63123350-63123369 | None:intergenic | 35.0% | |
| AAATTCCTTCAAGGTTTCTG+AGG | - | chr3.2:63123625-63123644 | None:intergenic | 35.0% | |
| AACCTATCTTAGAGAGCTTA+TGG | - | chr3.2:63125467-63125486 | None:intergenic | 35.0% | |
| AATGTCTTGATACAGCTGAA+AGG | - | chr3.2:63124874-63124893 | None:intergenic | 35.0% | |
| ACATCATCCTTAGAGTCATT+AGG | - | chr3.2:63123204-63123223 | None:intergenic | 35.0% | |
| AGGATCGAAAACCTCATTAT+TGG | - | chr3.2:63125055-63125074 | None:intergenic | 35.0% | |
| AGGTGAAAGAAATTCCTTCA+AGG | - | chr3.2:63123634-63123653 | None:intergenic | 35.0% | |
| AGGTGTTAGAGTGATTGAAT+TGG | + | chr3.2:63123170-63123189 | MS.gene62160:CDS | 35.0% | |
| ATAATAGTTGGTTGCCTTCT+TGG | + | chr3.2:63125790-63125809 | MS.gene62160:CDS | 35.0% | |
| CCTTGAAGCTAAAGAAGAAA+AGG | + | chr3.2:63123704-63123723 | MS.gene62160:CDS | 35.0% | |
| GACGTCAAACATTTGATAAG+TGG | - | chr3.2:63123356-63123375 | None:intergenic | 35.0% | |
| GCCATCAAAAACTACTTTGA+AGG | + | chr3.2:63125086-63125105 | MS.gene62160:CDS | 35.0% | |
| GGATCGAAAACCTCATTATT+GGG | - | chr3.2:63125054-63125073 | None:intergenic | 35.0% | |
| GGTAAACTTACATTCCATGA+AGG | - | chr3.2:63123233-63123252 | None:intergenic | 35.0% | |
| TATATGGCCTAATGACTCTA+AGG | + | chr3.2:63123194-63123213 | MS.gene62160:CDS | 35.0% | |
| TCAAATACCTCATTCCAAGA+AGG | - | chr3.2:63125807-63125826 | None:intergenic | 35.0% | |
| TCTTGAATTTCTCTTTGGTG+AGG | + | chr3.2:63124826-63124845 | MS.gene62160:intron | 35.0% | |
| TGAATATGACATGTCTGAGA+AGG | + | chr3.2:63125875-63125894 | MS.gene62160:CDS | 35.0% | |
| TGATAAACTCTTATGCAGGT+TGG | + | chr3.2:63125717-63125736 | MS.gene62160:intron | 35.0% | |
| TGTCGATGAAGATGATCTTA+AGG | + | chr3.2:63123931-63123950 | MS.gene62160:CDS | 35.0% | |
| TGTTGTATTTATCTCCTTCG+CGG | - | chr3.2:63125974-63125993 | None:intergenic | 35.0% | |
| TTTAGGTGATGAAGAAGCTT+GGG | + | chr3.2:63123755-63123774 | MS.gene62160:CDS | 35.0% | |
| ! | AATAGTGGAATGTCTCAAAG+TGG | + | chr3.2:63124051-63124070 | MS.gene62160:CDS | 35.0% |
| ! | ACGAAAACAGCTTTTAAGCA+AGG | + | chr3.2:63125487-63125506 | MS.gene62160:intron | 35.0% |
| ! | ATGTCTGAGAAGGATGATTT+TGG | + | chr3.2:63125885-63125904 | MS.gene62160:CDS | 35.0% |
| ! | CAAAAACTACTTTGAAGGTG+AGG | + | chr3.2:63125091-63125110 | MS.gene62160:intron | 35.0% |
| ! | CAAGGAATGTTTAAAGCCAA+TGG | + | chr3.2:63124982-63125001 | MS.gene62160:CDS | 35.0% |
| ! | GCTTAATTGCTATTCATGCT+GGG | + | chr3.2:63124014-63124033 | MS.gene62160:CDS | 35.0% |
| ! | TGTAGTCATCTGATGCATTT+TGG | - | chr3.2:63123991-63124010 | None:intergenic | 35.0% |
| ! | TTTGATGGCAAATGAGCTTT+AGG | - | chr3.2:63125075-63125094 | None:intergenic | 35.0% |
| !! | CCTTTTCTTCTTTAGCTTCA+AGG | - | chr3.2:63123707-63123726 | None:intergenic | 35.0% |
| !! | TTCCATAAGCTCTCTAAGAT+AGG | + | chr3.2:63125462-63125481 | MS.gene62160:intron | 35.0% |
| AAAGAAGTCCCTAGTTTGAG+AGG | + | chr3.2:63123780-63123799 | MS.gene62160:CDS | 40.0% | |
| ACAAACATGCTTACCTGTGT+GGG | + | chr3.2:63125911-63125930 | MS.gene62160:CDS | 40.0% | |
| ATATTGCGAGTGTATCCGAA+AGG | + | chr3.2:63124591-63124610 | MS.gene62160:CDS | 40.0% | |
| ATCTCCAGACTTCTATGCAA+GGG | + | chr3.2:63125300-63125319 | MS.gene62160:CDS | 40.0% | |
| ATGCCATCTAAGAAGACAGT+CGG | - | chr3.2:63124307-63124326 | None:intergenic | 40.0% | |
| CAAGCTTCTTCATCACCTAA+AGG | - | chr3.2:63123756-63123775 | None:intergenic | 40.0% | |
| CATTCCACTATTCCACCTTT+AGG | - | chr3.2:63124043-63124062 | None:intergenic | 40.0% | |
| CGATGAAGATGATCTTAAGG+AGG | + | chr3.2:63123934-63123953 | MS.gene62160:CDS | 40.0% | |
| CGGTACTATAGCTGATTACA+AGG | + | chr3.2:63123803-63123822 | MS.gene62160:CDS | 40.0% | |
| CTCAAATCTCAAAGCCGTAA+AGG | - | chr3.2:63125117-63125136 | None:intergenic | 40.0% | |
| CTGTATATATGGGAGAAGGA+TGG | + | chr3.2:63125239-63125258 | MS.gene62160:CDS | 40.0% | |
| CTTAGACGTCTCACTTTATC+AGG | - | chr3.2:63124079-63124098 | None:intergenic | 40.0% | |
| CTTTAGGTGATGAAGAAGCT+TGG | + | chr3.2:63123754-63123773 | MS.gene62160:CDS | 40.0% | |
| GAAAACTGGTCCCAATAATG+AGG | + | chr3.2:63125041-63125060 | MS.gene62160:CDS | 40.0% | |
| GAAAAGGCTGCTGAAACATA+TGG | + | chr3.2:63124118-63124137 | MS.gene62160:CDS | 40.0% | |
| GATGATGTTGATGTCCTTCA+TGG | + | chr3.2:63123216-63123235 | MS.gene62160:CDS | 40.0% | |
| GATGGTTGCATTTAACATGC+AGG | + | chr3.2:63124671-63124690 | MS.gene62160:CDS | 40.0% | |
| GTCACTGTATATATGGGAGA+AGG | + | chr3.2:63125235-63125254 | MS.gene62160:CDS | 40.0% | |
| GTCTAGAGACACTTGAATGA+CGG | - | chr3.2:63125171-63125190 | None:intergenic | 40.0% | |
| GTTGTATTTATCTCCTTCGC+GGG | - | chr3.2:63125973-63125992 | None:intergenic | 40.0% | |
| TCACAGAAGAGAAAGCCTTT+AGG | + | chr3.2:63123738-63123757 | MS.gene62160:CDS | 40.0% | |
| TGAAGATGATCTTAAGGAGG+AGG | + | chr3.2:63123937-63123956 | MS.gene62160:CDS | 40.0% | |
| TGGACGAAAATGATATCGGA+CGG | + | chr3.2:63124420-63124439 | MS.gene62160:intron | 40.0% | |
| TTAGGTGATGAAGAAGCTTG+GGG | + | chr3.2:63123756-63123775 | MS.gene62160:CDS | 40.0% | |
| TTGATCCTCTGATTGTTGAC+AGG | + | chr3.2:63124553-63124572 | MS.gene62160:intron | 40.0% | |
| ! | AGATCTCTTTGGTTGATGCA+AGG | + | chr3.2:63124964-63124983 | MS.gene62160:CDS | 40.0% |
| ! | AGCCCCGTTCAAATTTTAGA+TGG | + | chr3.2:63123563-63123582 | MS.gene62160:intron | 40.0% |
| ! | CGCTTAATTGCTATTCATGC+TGG | + | chr3.2:63124013-63124032 | MS.gene62160:CDS | 40.0% |
| ! | GGAATGTTTAAAGCCAATGG+AGG | + | chr3.2:63124985-63125004 | MS.gene62160:CDS | 40.0% |
| ! | TCTGAGAAGGATGATTTTGG+TGG | + | chr3.2:63125888-63125907 | MS.gene62160:CDS | 40.0% |
| ! | TTAGCTTCAAGGTACTCCTT+AGG | - | chr3.2:63123696-63123715 | None:intergenic | 40.0% |
| ! | TTTAAAGCCAATGGAGGATG+CGG | + | chr3.2:63124991-63125010 | MS.gene62160:CDS | 40.0% |
| ! | TTTTCAATTAGTAGCCGTGC+TGG | - | chr3.2:63124750-63124769 | None:intergenic | 40.0% |
| !! | CTTTGGAACAAACACATTGC+AGG | + | chr3.2:63124496-63124515 | MS.gene62160:intron | 40.0% |
| AACAAAACCGCATCCTCCAT+TGG | - | chr3.2:63125001-63125020 | None:intergenic | 45.0% | |
| AAGTGAGTCACAGCTCGAAA+AGG | + | chr3.2:63124102-63124121 | MS.gene62160:CDS | 45.0% | |
| AGGGTTATGGGAGATCTCTT+TGG | + | chr3.2:63124953-63124972 | MS.gene62160:intron | 45.0% | |
| ATAGTACCGCCTCTCAAACT+AGG | - | chr3.2:63123792-63123811 | None:intergenic | 45.0% | |
| ATTCATGCTGGGAAGCCTAA+AGG | + | chr3.2:63124025-63124044 | MS.gene62160:CDS | 45.0% | |
| CATACCCTTGCATAGAAGTC+TGG | - | chr3.2:63125307-63125326 | None:intergenic | 45.0% | |
| CATCTCCAGACTTCTATGCA+AGG | + | chr3.2:63125299-63125318 | MS.gene62160:CDS | 45.0% | |
| CCATGCATCCACCCAATTAA+TGG | - | chr3.2:63124645-63124664 | None:intergenic | 45.0% | |
| CCATTAATTGGGTGGATGCA+TGG | + | chr3.2:63124642-63124661 | MS.gene62160:CDS | 45.0% | |
| CCTGTGTGGGAACTAAGAAA+CGG | + | chr3.2:63125924-63125943 | MS.gene62160:CDS | 45.0% | |
| CTAACTAACCTGAGCCACTT+TGG | - | chr3.2:63123459-63123478 | None:intergenic | 45.0% | |
| CTTCGTTGCGTCTGAATATC+CGG | + | chr3.2:63123391-63123410 | MS.gene62160:CDS | 45.0% | |
| GAAGCCTAAAGGTGGAATAG+TGG | + | chr3.2:63124036-63124055 | MS.gene62160:CDS | 45.0% | |
| GAATCAAGAGCCAATGCAAC+AGG | - | chr3.2:63124219-63124238 | None:intergenic | 45.0% | |
| GACAAACATGCTTACCTGTG+TGG | + | chr3.2:63125910-63125929 | MS.gene62160:CDS | 45.0% | |
| GAGGTAATGCGTGTACCTTT+CGG | - | chr3.2:63124609-63124628 | None:intergenic | 45.0% | |
| GTGAACCTGTCAACAATCAG+AGG | - | chr3.2:63124561-63124580 | None:intergenic | 45.0% | |
| TAGTACCGCCTCTCAAACTA+GGG | - | chr3.2:63123791-63123810 | None:intergenic | 45.0% | |
| TCCTACCTCAGAAACCTTGA+AGG | + | chr3.2:63123617-63123636 | MS.gene62160:CDS | 45.0% | |
| TGAATTCCCGCTTTCTGTTC+CGG | + | chr3.2:63125824-63125843 | MS.gene62160:CDS | 45.0% | |
| TGGTTCTTTGGCAGGGTTAT+GGG | + | chr3.2:63124941-63124960 | MS.gene62160:intron | 45.0% | |
| TTGGTTGCCTTCTTGGAATG+AGG | + | chr3.2:63125797-63125816 | MS.gene62160:CDS | 45.0% | |
| ! | AGTGGCTCAGGTTAGTTAGT+TGG | + | chr3.2:63123460-63123479 | MS.gene62160:intron | 45.0% |
| ! | ATCATCGAAGCACTTCAGAG+AGG | + | chr3.2:63123150-63123169 | MS.gene62160:CDS | 45.0% |
| ! | CTTATGCAGGTTGGAATTGC+TGG | + | chr3.2:63125726-63125745 | MS.gene62160:intron | 45.0% |
| ! | CTTTGAAGGTGAGGCCTTTA+CGG | + | chr3.2:63125100-63125119 | MS.gene62160:intron | 45.0% |
| ! | TCACCGACTGTCTTCTTAGA+TGG | + | chr3.2:63124301-63124320 | MS.gene62160:intron | 45.0% |
| ! | TCTGAAGTGCTTCGATGATG+GGG | - | chr3.2:63123149-63123168 | None:intergenic | 45.0% |
| !! | CTCTGAAGTGCTTCGATGAT+GGG | - | chr3.2:63123150-63123169 | None:intergenic | 45.0% |
| !! | TCCTTCAAGGTTTCTGAGGT+AGG | - | chr3.2:63123621-63123640 | None:intergenic | 45.0% |
| !! | TCTCTGAAGTGCTTCGATGA+TGG | - | chr3.2:63123151-63123170 | None:intergenic | 45.0% |
| !! | TTTTGCTGTGGGTGGTTCTT+TGG | + | chr3.2:63124929-63124948 | MS.gene62160:intron | 45.0% |
| !! | AGTAATTAAATATTATTTAA+TGG | + | chr3.2:63124400-63124419 | MS.gene62160:intron | 5.0% |
| AGATTCCGACGAAGCGGAAA+AGG | + | chr3.2:63123961-63123980 | MS.gene62160:CDS | 50.0% | |
| AGTCGGTGAAACCATTGCCA+AGG | - | chr3.2:63124290-63124309 | None:intergenic | 50.0% | |
| CATATCAACCAAGCCGCCTA+AGG | + | chr3.2:63123677-63123696 | MS.gene62160:CDS | 50.0% | |
| CCACCTTACTCCTGATCTTC+AGG | + | chr3.2:63123433-63123452 | MS.gene62160:CDS | 50.0% | |
| CCGTTTCTTAGTTCCCACAC+AGG | - | chr3.2:63125927-63125946 | None:intergenic | 50.0% | |
| CCTGAAGATCAGGAGTAAGG+TGG | - | chr3.2:63123436-63123455 | None:intergenic | 50.0% | |
| CGGATATTCAGACGCAACGA+AGG | - | chr3.2:63123393-63123412 | None:intergenic | 50.0% | |
| GAAGTCCCTAGTTTGAGAGG+CGG | + | chr3.2:63123783-63123802 | MS.gene62160:CDS | 50.0% | |
| GTGGTTCTTTGGCAGGGTTA+TGG | + | chr3.2:63124940-63124959 | MS.gene62160:intron | 50.0% | |
| GTTCCATTACATTCCCGCGA+AGG | + | chr3.2:63125957-63125976 | MS.gene62160:CDS | 50.0% | |
| TCCTGATCTTCAGGCCAAAG+TGG | + | chr3.2:63123442-63123461 | MS.gene62160:CDS | 50.0% | |
| TCTCCTTCGCGGGAATGTAA+TGG | - | chr3.2:63125963-63125982 | None:intergenic | 50.0% | |
| TGGCCTGAAGATCAGGAGTA+AGG | - | chr3.2:63123439-63123458 | None:intergenic | 50.0% | |
| ! | CTGAAGTGCTTCGATGATGG+GGG | - | chr3.2:63123148-63123167 | None:intergenic | 50.0% |
| ! | GCTTCAAGGTACTCCTTAGG+CGG | - | chr3.2:63123693-63123712 | None:intergenic | 50.0% |
| CATGCTGGGAAGCCTAAAGG+TGG | + | chr3.2:63124028-63124047 | MS.gene62160:CDS | 55.0% | |
| CTGTGGGTGGTTCTTTGGCA+GGG | + | chr3.2:63124934-63124953 | MS.gene62160:intron | 55.0% | |
| GAAACCTGTGAGGTCCAGCA+CGG | + | chr3.2:63124733-63124752 | MS.gene62160:intron | 55.0% | |
| GGAGGAAGATTCCGACGAAG+CGG | + | chr3.2:63123955-63123974 | MS.gene62160:CDS | 55.0% | |
| GTGGATGCATGGAGCTCAGA+TGG | + | chr3.2:63124653-63124672 | MS.gene62160:CDS | 55.0% | |
| TCTTCAGGCCAAAGTGGCTC+AGG | + | chr3.2:63123448-63123467 | MS.gene62160:CDS | 55.0% | |
| ! | AAGGTACTCCTTAGGCGGCT+TGG | - | chr3.2:63123688-63123707 | None:intergenic | 55.0% |
| ! | GCCACTTTGGCCTGAAGATC+AGG | - | chr3.2:63123446-63123465 | None:intergenic | 55.0% |
| CCAGCTCCGGAACAGAAAGC+GGG | - | chr3.2:63125833-63125852 | None:intergenic | 60.0% | |
| GCCAGCTCCGGAACAGAAAG+CGG | - | chr3.2:63125834-63125853 | None:intergenic | 60.0% | |
| GCTGTGGGTGGTTCTTTGGC+AGG | + | chr3.2:63124933-63124952 | MS.gene62160:intron | 60.0% | |
| ! | GCGTGCCTTTTCCGCTTCGT+CGG | - | chr3.2:63123969-63123988 | None:intergenic | 60.0% |
| ATGCGAAGCAGCGCCAGCTC+CGG | - | chr3.2:63125846-63125865 | None:intergenic | 65.0% | |
| CCCGCTTTCTGTTCCGGAGC+TGG | + | chr3.2:63125830-63125849 | MS.gene62160:CDS | 65.0% | |
| GTAGCCGTGCTGGACCTCAC+AGG | - | chr3.2:63124740-63124759 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 63123045 | 63126028 | 63123045 | ID=MS.gene62160 |
| chr3.2 | mRNA | 63123045 | 63126028 | 63123045 | ID=MS.gene62160.t1;Parent=MS.gene62160 |
| chr3.2 | exon | 63123045 | 63123241 | 63123045 | ID=MS.gene62160.t1.exon1;Parent=MS.gene62160.t1 |
| chr3.2 | CDS | 63123045 | 63123241 | 63123045 | ID=cds.MS.gene62160.t1;Parent=MS.gene62160.t1 |
| chr3.2 | exon | 63123334 | 63123469 | 63123334 | ID=MS.gene62160.t1.exon2;Parent=MS.gene62160.t1 |
| chr3.2 | CDS | 63123334 | 63123469 | 63123334 | ID=cds.MS.gene62160.t1;Parent=MS.gene62160.t1 |
| chr3.2 | exon | 63123582 | 63123824 | 63123582 | ID=MS.gene62160.t1.exon3;Parent=MS.gene62160.t1 |
| chr3.2 | CDS | 63123582 | 63123824 | 63123582 | ID=cds.MS.gene62160.t1;Parent=MS.gene62160.t1 |
| chr3.2 | exon | 63123920 | 63124155 | 63123920 | ID=MS.gene62160.t1.exon4;Parent=MS.gene62160.t1 |
| chr3.2 | CDS | 63123920 | 63124155 | 63123920 | ID=cds.MS.gene62160.t1;Parent=MS.gene62160.t1 |
| chr3.2 | exon | 63124575 | 63124692 | 63124575 | ID=MS.gene62160.t1.exon5;Parent=MS.gene62160.t1 |
| chr3.2 | CDS | 63124575 | 63124692 | 63124575 | ID=cds.MS.gene62160.t1;Parent=MS.gene62160.t1 |
| chr3.2 | exon | 63124955 | 63125107 | 63124955 | ID=MS.gene62160.t1.exon6;Parent=MS.gene62160.t1 |
| chr3.2 | CDS | 63124955 | 63125107 | 63124955 | ID=cds.MS.gene62160.t1;Parent=MS.gene62160.t1 |
| chr3.2 | exon | 63125235 | 63125321 | 63125235 | ID=MS.gene62160.t1.exon7;Parent=MS.gene62160.t1 |
| chr3.2 | CDS | 63125235 | 63125321 | 63125235 | ID=cds.MS.gene62160.t1;Parent=MS.gene62160.t1 |
| chr3.2 | exon | 63125735 | 63126028 | 63125735 | ID=MS.gene62160.t1.exon8;Parent=MS.gene62160.t1 |
| chr3.2 | CDS | 63125735 | 63126028 | 63125735 | ID=cds.MS.gene62160.t1;Parent=MS.gene62160.t1 |
| Gene Sequence |
| Protein sequence |
