Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63265.t1 | XP_003628664.2 | 99.6 | 533 | 2 | 0 | 1 | 533 | 1 | 533 | 8.60E-305 | 1055.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63265.t1 | Q27GI3 | 82.2 | 533 | 94 | 1 | 1 | 533 | 1 | 532 | 2.7e-259 | 895.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63265.t1 | G7LFG1 | 99.6 | 533 | 2 | 0 | 1 | 533 | 1 | 533 | 6.2e-305 | 1055.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049133 | MS.gene63265 | 0.805164 | 1.52E-49 | -1.69E-46 |
| MS.gene049989 | MS.gene63265 | 0.816911 | 4.33E-52 | -1.69E-46 |
| MS.gene050297 | MS.gene63265 | 0.830073 | 3.61E-55 | -1.69E-46 |
| MS.gene050338 | MS.gene63265 | 0.849962 | 2.31E-60 | -1.69E-46 |
| MS.gene05124 | MS.gene63265 | 0.811348 | 7.32E-51 | -1.69E-46 |
| MS.gene052143 | MS.gene63265 | 0.854052 | 1.59E-61 | -1.69E-46 |
| MS.gene052308 | MS.gene63265 | 0.83739 | 5.35E-57 | -1.69E-46 |
| MS.gene052367 | MS.gene63265 | 0.844672 | 6.54E-59 | -1.69E-46 |
| MS.gene053173 | MS.gene63265 | 0.829231 | 5.78E-55 | -1.69E-46 |
| MS.gene053348 | MS.gene63265 | 0.801475 | 8.85E-49 | -1.69E-46 |
| MS.gene053416 | MS.gene63265 | 0.818829 | 1.60E-52 | -1.69E-46 |
| MS.gene053417 | MS.gene63265 | 0.815914 | 7.24E-52 | -1.69E-46 |
| MS.gene054551 | MS.gene63265 | 0.827796 | 1.28E-54 | -1.69E-46 |
| MS.gene054614 | MS.gene63265 | 0.822005 | 2.99E-53 | -1.69E-46 |
| MS.gene054999 | MS.gene63265 | 0.815257 | 1.01E-51 | -1.69E-46 |
| MS.gene055251 | MS.gene63265 | 0.81213 | 4.95E-51 | -1.69E-46 |
| MS.gene055382 | MS.gene63265 | 0.828597 | 8.23E-55 | -1.69E-46 |
| MS.gene055578 | MS.gene63265 | 0.823675 | 1.22E-53 | -1.69E-46 |
| MS.gene056041 | MS.gene63265 | 0.830075 | 3.60E-55 | -1.69E-46 |
| MS.gene056266 | MS.gene63265 | -0.846714 | 1.83E-59 | -1.69E-46 |
| MS.gene05640 | MS.gene63265 | 0.815915 | 7.24E-52 | -1.69E-46 |
| MS.gene057367 | MS.gene63265 | 0.804502 | 2.09E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene63265 | 0.805806 | 1.12E-49 | -1.69E-46 |
| MS.gene058853 | MS.gene63265 | 0.844133 | 9.13E-59 | -1.69E-46 |
| MS.gene060473 | MS.gene63265 | 0.808479 | 3.04E-50 | -1.69E-46 |
| MS.gene060565 | MS.gene63265 | 0.801013 | 1.10E-48 | -1.69E-46 |
| MS.gene06057 | MS.gene63265 | 0.818927 | 1.52E-52 | -1.69E-46 |
| MS.gene06093 | MS.gene63265 | 0.815354 | 9.65E-52 | -1.69E-46 |
| MS.gene061044 | MS.gene63265 | 0.806145 | 9.48E-50 | -1.69E-46 |
| MS.gene061099 | MS.gene63265 | 0.807802 | 4.23E-50 | -1.69E-46 |
| MS.gene061260 | MS.gene63265 | 0.838261 | 3.19E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63265.t1 | MTR_8g063220 | 99.625 | 533 | 2 | 0 | 1 | 533 | 1 | 533 | 0.0 | 1077 |
| MS.gene63265.t1 | MTR_5g035180 | 82.609 | 529 | 91 | 1 | 6 | 533 | 10 | 538 | 0.0 | 901 |
| MS.gene63265.t1 | MTR_4g106750 | 81.051 | 533 | 100 | 1 | 1 | 533 | 1 | 532 | 0.0 | 892 |
| MS.gene63265.t1 | MTR_3g078270 | 80.675 | 533 | 102 | 1 | 1 | 533 | 1 | 532 | 0.0 | 887 |
| MS.gene63265.t1 | MTR_4g106750 | 80.331 | 483 | 95 | 0 | 51 | 533 | 1 | 483 | 0.0 | 803 |
| MS.gene63265.t1 | MTR_3g103230 | 61.377 | 523 | 197 | 2 | 13 | 533 | 35 | 554 | 0.0 | 683 |
| MS.gene63265.t1 | MTR_2g016460 | 59.962 | 522 | 206 | 2 | 10 | 531 | 4 | 522 | 0.0 | 649 |
| MS.gene63265.t1 | MTR_5g022110 | 58.857 | 525 | 211 | 2 | 11 | 533 | 26 | 547 | 0.0 | 647 |
| MS.gene63265.t1 | MTR_1g106085 | 59.962 | 527 | 208 | 2 | 6 | 532 | 3 | 526 | 0.0 | 645 |
| MS.gene63265.t1 | MTR_8g086520 | 59.846 | 518 | 206 | 1 | 14 | 531 | 7 | 522 | 0.0 | 644 |
| MS.gene63265.t1 | MTR_3g080390 | 58.252 | 515 | 212 | 2 | 18 | 531 | 6 | 518 | 0.0 | 612 |
| MS.gene63265.t1 | MTR_4g106750 | 78.378 | 370 | 80 | 0 | 164 | 533 | 11 | 380 | 0.0 | 611 |
| MS.gene63265.t1 | MTR_8g086520 | 59.375 | 448 | 182 | 0 | 14 | 461 | 7 | 454 | 0.0 | 554 |
| MS.gene63265.t1 | MTR_8g086520 | 60.794 | 403 | 156 | 1 | 129 | 531 | 6 | 406 | 0.0 | 516 |
| MS.gene63265.t1 | MTR_1g021120 | 51.852 | 513 | 241 | 3 | 22 | 532 | 38 | 546 | 1.01e-180 | 520 |
| MS.gene63265.t1 | MTR_8g086520 | 59.747 | 395 | 159 | 0 | 14 | 408 | 7 | 401 | 8.20e-171 | 489 |
| MS.gene63265.t1 | MTR_8g068550 | 34.823 | 537 | 312 | 5 | 26 | 530 | 225 | 755 | 1.26e-106 | 336 |
| MS.gene63265.t1 | MTR_5g032020 | 36.873 | 518 | 289 | 5 | 41 | 526 | 182 | 693 | 4.25e-103 | 325 |
| MS.gene63265.t1 | MTR_2g084895 | 34.933 | 521 | 299 | 5 | 44 | 530 | 164 | 678 | 8.06e-96 | 306 |
| MS.gene63265.t1 | MTR_4g055290 | 33.973 | 521 | 299 | 6 | 44 | 530 | 171 | 680 | 2.14e-92 | 297 |
| MS.gene63265.t1 | MTR_2g103510 | 31.619 | 525 | 311 | 6 | 27 | 530 | 94 | 591 | 1.07e-88 | 285 |
| MS.gene63265.t1 | MTR_8g086535 | 65.625 | 96 | 33 | 0 | 314 | 409 | 23 | 118 | 3.33e-35 | 128 |
| MS.gene63265.t1 | MTR_1g079900 | 37.903 | 124 | 60 | 3 | 421 | 531 | 59 | 178 | 1.23e-17 | 81.6 |
| MS.gene63265.t1 | MTR_3g087320 | 46.269 | 67 | 22 | 1 | 462 | 528 | 72 | 124 | 2.98e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63265.t1 | AT5G62890 | 82.176 | 533 | 94 | 1 | 1 | 533 | 1 | 532 | 0.0 | 910 |
| MS.gene63265.t1 | AT5G62890 | 82.176 | 533 | 94 | 1 | 1 | 533 | 1 | 532 | 0.0 | 910 |
| MS.gene63265.t1 | AT5G62890 | 82.176 | 533 | 94 | 1 | 1 | 533 | 1 | 532 | 0.0 | 910 |
| MS.gene63265.t1 | AT1G60030 | 80.455 | 527 | 103 | 0 | 7 | 533 | 12 | 538 | 0.0 | 897 |
| MS.gene63265.t1 | AT5G49990 | 77.273 | 528 | 119 | 1 | 6 | 533 | 2 | 528 | 0.0 | 832 |
| MS.gene63265.t1 | AT5G49990 | 77.273 | 528 | 119 | 1 | 6 | 533 | 2 | 528 | 0.0 | 832 |
| MS.gene63265.t1 | AT5G49990 | 77.273 | 528 | 119 | 1 | 6 | 533 | 2 | 528 | 0.0 | 832 |
| MS.gene63265.t1 | AT5G49990 | 77.273 | 528 | 119 | 1 | 6 | 533 | 2 | 528 | 0.0 | 832 |
| MS.gene63265.t1 | AT1G10540 | 73.606 | 538 | 136 | 3 | 1 | 532 | 1 | 538 | 0.0 | 830 |
| MS.gene63265.t1 | AT5G62890 | 82.430 | 461 | 80 | 1 | 1 | 461 | 1 | 460 | 0.0 | 783 |
| MS.gene63265.t1 | AT1G49960 | 60.920 | 522 | 204 | 0 | 11 | 532 | 4 | 525 | 0.0 | 655 |
| MS.gene63265.t1 | AT2G34190 | 59.459 | 518 | 208 | 1 | 14 | 531 | 7 | 522 | 0.0 | 642 |
| MS.gene63265.t1 | AT1G65550 | 55.955 | 529 | 224 | 2 | 11 | 532 | 14 | 540 | 0.0 | 627 |
| MS.gene63265.t1 | AT2G05760 | 56.286 | 517 | 223 | 2 | 16 | 531 | 4 | 518 | 0.0 | 605 |
| MS.gene63265.t1 | AT1G10540 | 73.969 | 388 | 95 | 3 | 1 | 382 | 1 | 388 | 0.0 | 591 |
| MS.gene63265.t1 | AT2G26510 | 48.833 | 514 | 262 | 1 | 19 | 532 | 36 | 548 | 2.69e-175 | 506 |
| MS.gene63265.t1 | AT5G25420 | 50.000 | 436 | 150 | 4 | 11 | 446 | 26 | 393 | 4.70e-144 | 421 |
| MS.gene63265.t1 | AT2G26510 | 50.549 | 364 | 180 | 0 | 19 | 382 | 36 | 399 | 8.88e-123 | 367 |
| MS.gene63265.t1 | AT2G26510 | 49.858 | 351 | 176 | 0 | 19 | 369 | 36 | 386 | 2.92e-116 | 350 |
| MS.gene63265.t1 | AT2G27810 | 34.775 | 555 | 319 | 6 | 14 | 530 | 152 | 701 | 3.23e-99 | 315 |
| MS.gene63265.t1 | AT2G27810 | 33.333 | 579 | 319 | 7 | 14 | 530 | 152 | 725 | 2.97e-94 | 303 |
| MS.gene63265.t1 | AT4G38050 | 35.057 | 522 | 301 | 4 | 41 | 530 | 189 | 704 | 1.85e-91 | 295 |
| MS.gene63265.t1 | AT2G27810 | 38.041 | 439 | 249 | 4 | 14 | 430 | 152 | 589 | 4.82e-85 | 275 |
| MS.gene63265.t1 | AT2G27810 | 38.010 | 392 | 220 | 4 | 14 | 383 | 152 | 542 | 2.41e-74 | 245 |
Find 123 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTTGGACTGTATGAATT+TGG | 0.149654 | 8.1:+40508902 | MS.gene63265:CDS |
| TATATATATGTAGGAAAATT+TGG | 0.152981 | 8.1:+40510857 | MS.gene63265:intron |
| AACAACTATTTCGATTATTT+TGG | 0.157131 | 8.1:+40508388 | MS.gene63265:CDS |
| AGCATTTGTTGCTAGTTTAT+TGG | 0.182471 | 8.1:+40511522 | MS.gene63265:CDS |
| TCAACACTTCAAATTGTTCT+TGG | 0.257245 | 8.1:+40508593 | MS.gene63265:CDS |
| CTTGCAAAATGCGTGGAAAT+TGG | 0.267827 | 8.1:+40509038 | MS.gene63265:CDS |
| ATAATGTTATCTGGAATCTT+TGG | 0.270420 | 8.1:+40510203 | MS.gene63265:CDS |
| TTGGTTGCTCTCTCAGGCTT+TGG | 0.275859 | 8.1:+40508887 | MS.gene63265:CDS |
| ACAGATCGTGCCGGAATTAT+AGG | 0.284987 | 8.1:+40509353 | MS.gene63265:CDS |
| ACTACTAGGATGATGATTTC+TGG | 0.292845 | 8.1:-40509065 | None:intergenic |
| GTTCCATTGGTTGCTCTCTC+AGG | 0.316235 | 8.1:+40508881 | MS.gene63265:CDS |
| GAAGTGTTGAAGCAACTATA+AGG | 0.319361 | 8.1:-40508580 | None:intergenic |
| ACTCGTCTACCTGCGGTTAT+TGG | 0.330066 | 8.1:+40508344 | MS.gene63265:CDS |
| TTTAGAACAAAATTCATCTT+AGG | 0.336915 | 8.1:+40511098 | MS.gene63265:CDS |
| GACGAGTTCCAAATGTTGTT+TGG | 0.353107 | 8.1:-40508328 | None:intergenic |
| TAGTTTATTGGCAATGTTCT+TGG | 0.359790 | 8.1:+40511534 | MS.gene63265:CDS |
| TATGCTTATCTTCTTACTGT+TGG | 0.361248 | 8.1:+40509284 | MS.gene63265:CDS |
| CAAATTGTTCTTGGCTTTAG+TGG | 0.362555 | 8.1:+40508602 | MS.gene63265:CDS |
| TAATGTTATCTGGAATCTTT+GGG | 0.364132 | 8.1:+40510204 | MS.gene63265:CDS |
| TCCTCTCTCTGCTGTTCCAT+TGG | 0.380614 | 8.1:+40508868 | MS.gene63265:CDS |
| GCTTATCTTCTTACTGTTGG+TGG | 0.382600 | 8.1:+40509287 | MS.gene63265:CDS |
| TCGATTTGCAGTTATATTCT+CGG | 0.386839 | 8.1:+40509244 | MS.gene63265:CDS |
| CAATATAAAGCTGCAACTAT+TGG | 0.396056 | 8.1:-40510905 | None:intergenic |
| CTAAGAACTGAAGGTGGAAT+TGG | 0.398423 | 8.1:-40510018 | None:intergenic |
| TTTGGTAATTGATCTTTAAC+CGG | 0.400618 | 8.1:-40507593 | None:intergenic |
| GGAATCTTTGGGACGGGGAA+TGG | 0.403946 | 8.1:+40510215 | MS.gene63265:CDS |
| GGAGTGGGAATAATGTTATC+TGG | 0.409107 | 8.1:+40510194 | MS.gene63265:CDS |
| ACAAATGCTTCTGATGCAAA+TGG | 0.420176 | 8.1:-40511508 | None:intergenic |
| AAAATAATCGAAATAGTTGT+TGG | 0.427661 | 8.1:-40508386 | None:intergenic |
| AGGAGCACCACCTATAATTC+CGG | 0.429912 | 8.1:-40509363 | None:intergenic |
| TTTCTTGTTCCACAGTCAAC+AGG | 0.435265 | 8.1:+40509958 | MS.gene63265:intron |
| AAGTGTTGAAGCAACTATAA+GGG | 0.436382 | 8.1:-40508579 | None:intergenic |
| GTAATACAATAAGAAACATT+TGG | 0.436718 | 8.1:-40507611 | None:intergenic |
| GGAAGAAGTTCATCTAGCTT+TGG | 0.438949 | 8.1:-40507566 | None:intergenic |
| CAACATTACCTTGTGATGCT+TGG | 0.442847 | 8.1:+40508097 | MS.gene63265:CDS |
| GATTCAGACTCTACTATTTG+TGG | 0.446047 | 8.1:+40508286 | MS.gene63265:CDS |
| TTCTTGGCTTTAGTGGACTT+TGG | 0.452149 | 8.1:+40508609 | MS.gene63265:CDS |
| GAAGCTGAGGCAATCCTACT+TGG | 0.453748 | 8.1:+40508070 | MS.gene63265:intron |
| AATTGATCTTTAACCGGATG+TGG | 0.458173 | 8.1:-40507587 | None:intergenic |
| TGTTTAAATTGCAAAATTGA+AGG | 0.465704 | 8.1:-40511073 | None:intergenic |
| TTATCTGGAATCTTTGGGAC+GGG | 0.466849 | 8.1:+40510209 | MS.gene63265:CDS |
| ACTGCAAATCGATCAAAGAT+AGG | 0.467601 | 8.1:-40509233 | None:intergenic |
| GAGTCCCGTATCCCTTTCAA+TGG | 0.474945 | 8.1:+40509559 | MS.gene63265:CDS |
| AAAGCTGCAACTATTGGTGC+TGG | 0.480315 | 8.1:-40510899 | None:intergenic |
| ATCTGAGGGACTAGAGAGCT+TGG | 0.483173 | 8.1:-40508136 | None:intergenic |
| TACACTGCATTTAAAAGCTA+TGG | 0.485885 | 8.1:+40511167 | MS.gene63265:CDS |
| GAATTATAGGTGGTGCTCCT+TGG | 0.486079 | 8.1:+40509366 | MS.gene63265:CDS |
| TACCCACATATGCAAAGAAA+AGG | 0.490171 | 8.1:-40510928 | None:intergenic |
| AATCAAACACGTAAAGATAG+AGG | 0.492332 | 8.1:+40511580 | MS.gene63265:CDS |
| AGATGAACTTCTTCCACATC+CGG | 0.493420 | 8.1:+40507574 | MS.gene63265:CDS |
| CGTCTACCTGCGGTTATTGG+AGG | 0.495761 | 8.1:+40508347 | MS.gene63265:CDS |
| AGAAATTTGAGAAGATAATG+AGG | 0.496651 | 8.1:+40508543 | MS.gene63265:intron |
| TAGCAGAGGTGTAGGTTGGC+AGG | 0.497651 | 8.1:+40510038 | MS.gene63265:CDS |
| TGACGCGTGTAGGTAGCCGC+AGG | 0.498429 | 8.1:+40510447 | MS.gene63265:CDS |
| AGTCCCGTATCCCTTTCAAT+GGG | 0.498864 | 8.1:+40509560 | MS.gene63265:CDS |
| TTCTTAGCAGAGGTGTAGGT+TGG | 0.500569 | 8.1:+40510034 | MS.gene63265:CDS |
| CATCTTGCGCGAGTGTGTAC+AGG | 0.513618 | 8.1:-40511191 | None:intergenic |
| CTGTACACACTCGCGCAAGA+TGG | 0.514303 | 8.1:+40511192 | MS.gene63265:CDS |
| GTTTCACCAGCATCAAATGT+TGG | 0.514762 | 8.1:-40509588 | None:intergenic |
| CAAATGCTTCTGATGCAAAT+GGG | 0.516521 | 8.1:-40511507 | None:intergenic |
| GCTCCCCATTGAAAGGGATA+CGG | 0.521423 | 8.1:-40509564 | None:intergenic |
| GAAATTTGAGAAGATAATGA+GGG | 0.527302 | 8.1:+40508544 | MS.gene63265:intron |
| TCAGTTCTTAGCAGAGGTGT+AGG | 0.527841 | 8.1:+40510030 | MS.gene63265:CDS |
| AGTTCATCTAGCTTTGGTTG+TGG | 0.528453 | 8.1:-40507560 | None:intergenic |
| CTCCCCATTGAAAGGGATAC+GGG | 0.528947 | 8.1:-40509563 | None:intergenic |
| CATTTCCTCCTCCCATCTGA+GGG | 0.532316 | 8.1:-40508150 | None:intergenic |
| TGTTGGAGCTCCCCATTGAA+AGG | 0.534302 | 8.1:-40509571 | None:intergenic |
| TGACACTACACAGGTTCTGC+AGG | 0.537384 | 8.1:+40511041 | MS.gene63265:intron |
| AGGGTTGTTCAAATATCAGC+TGG | 0.538362 | 8.1:+40510467 | MS.gene63265:CDS |
| AAGATAGAGGAATGCATTGG+TGG | 0.544867 | 8.1:+40511593 | MS.gene63265:CDS |
| TTACCTGTGAAAATACTACT+AGG | 0.545707 | 8.1:-40509079 | None:intergenic |
| TGTACACACTCGCGCAAGAT+GGG | 0.546787 | 8.1:+40511193 | MS.gene63265:CDS |
| CAGACTCTACTATTTGTGGC+TGG | 0.549069 | 8.1:+40508290 | MS.gene63265:CDS |
| GCATGGTCTAATTACACAGA+AGG | 0.552287 | 8.1:-40511694 | None:intergenic |
| ACATTTCCTCCTCCCATCTG+AGG | 0.556933 | 8.1:-40508151 | None:intergenic |
| TTTCGTATGTATCAGGGAGT+GGG | 0.558832 | 8.1:+40510179 | MS.gene63265:intron |
| GTTGGAGCTCCCCATTGAAA+GGG | 0.562774 | 8.1:-40509570 | None:intergenic |
| TATTCTCGGTGGCAATTGTG+TGG | 0.565953 | 8.1:+40509258 | MS.gene63265:CDS |
| GTGCTTTCATTGCTGTGTCA+AGG | 0.567975 | 8.1:+40509980 | MS.gene63265:CDS |
| TTGTATCTGTCTTGAATGAA+CGG | 0.569196 | 8.1:-40511624 | None:intergenic |
| AGCTCTCTAGTCCCTCAGAT+GGG | 0.572831 | 8.1:+40508139 | MS.gene63265:CDS |
| CCACCTTCAGTTCTTAGCAG+AGG | 0.574616 | 8.1:+40510024 | MS.gene63265:CDS |
| TACATTCCTCACATGATGAA+AGG | 0.578852 | 8.1:+40509203 | MS.gene63265:CDS |
| CTAGTCCCTCAGATGGGAGG+AGG | 0.579586 | 8.1:+40508145 | MS.gene63265:CDS |
| GAAGATAATGAGGGGAACAC+AGG | 0.579779 | 8.1:+40508553 | MS.gene63265:CDS |
| GGTAATGTTGAAAACCAAGT+AGG | 0.581981 | 8.1:-40508084 | None:intergenic |
| TTCATTAGTTGCTCTAGTAG+AGG | 0.583871 | 8.1:+40509629 | MS.gene63265:CDS |
| AGTTGTTGGCACAAAAGTGT+AGG | 0.584640 | 8.1:-40508372 | None:intergenic |
| TGCGACAAACCAACCTCATG+AGG | 0.586478 | 8.1:-40508437 | None:intergenic |
| AGTAACTTACGCCATGGAGG+AGG | 0.587102 | 8.1:-40507638 | None:intergenic |
| AAGCTCTCTAGTCCCTCAGA+TGG | 0.588907 | 8.1:+40508138 | MS.gene63265:CDS |
| GTGTATTCATTGAAATATTG+TGG | 0.591497 | 8.1:-40511149 | None:intergenic |
| GTATTACAAGTCCTCCTCCA+TGG | 0.592330 | 8.1:+40507627 | MS.gene63265:CDS |
| ACACCTCTGCTAAGAACTGA+AGG | 0.598541 | 8.1:-40510027 | None:intergenic |
| AAGATAATGAGGGGAACACA+GGG | 0.601084 | 8.1:+40508554 | MS.gene63265:CDS |
| GTTATCTGGAATCTTTGGGA+CGG | 0.603451 | 8.1:+40510208 | MS.gene63265:CDS |
| CTCTTAGCTTTGACGCGTGT+AGG | 0.604171 | 8.1:+40510437 | MS.gene63265:CDS |
| GACTTTGGCGCAATGTAGTG+AGG | 0.608806 | 8.1:+40508624 | MS.gene63265:CDS |
| ATTATAGCTTGCAAAATGCG+TGG | 0.611240 | 8.1:+40509031 | MS.gene63265:intron |
| CTAAAACACAAATTACATGT+AGG | 0.613818 | 8.1:+40509330 | MS.gene63265:CDS |
| GTATGAATTTGGATTTCCTG+TGG | 0.614553 | 8.1:+40508913 | MS.gene63265:CDS |
| CATGGTCTAATTACACAGAA+GGG | 0.614708 | 8.1:-40511693 | None:intergenic |
| AAGCCTGAGAGAGCAACCAA+TGG | 0.615790 | 8.1:-40508884 | None:intergenic |
| TAGGATCCTCCAATAACCGC+AGG | 0.620528 | 8.1:-40508353 | None:intergenic |
| AGATAGAGGAATGCATTGGT+GGG | 0.621819 | 8.1:+40511594 | MS.gene63265:CDS |
| GACGCGTGTAGGTAGCCGCA+GGG | 0.622153 | 8.1:+40510448 | MS.gene63265:CDS |
| GGAGCTCCAACATTTGATGC+TGG | 0.622188 | 8.1:+40509582 | MS.gene63265:CDS |
| GTTCATTCAAGACAGATACA+AGG | 0.624734 | 8.1:+40511626 | MS.gene63265:CDS |
| TATCTGGAATCTTTGGGACG+GGG | 0.626815 | 8.1:+40510210 | MS.gene63265:CDS |
| ACCAATGGAACAGCAGAGAG+AGG | 0.631694 | 8.1:-40508869 | None:intergenic |
| GTAAAGATAGAGGAATGCAT+TGG | 0.632524 | 8.1:+40511590 | MS.gene63265:CDS |
| ACATGTAGGACAGATCGTGC+CGG | 0.640862 | 8.1:+40509344 | MS.gene63265:CDS |
| TCTCTAGTCCCTCAGATGGG+AGG | 0.650215 | 8.1:+40508142 | MS.gene63265:CDS |
| CAGTTGTACCAAGCATCACA+AGG | 0.652446 | 8.1:-40508105 | None:intergenic |
| ATTTGCAGTTATATTCTCGG+TGG | 0.660016 | 8.1:+40509247 | MS.gene63265:CDS |
| ATTTGGAACTCGTCTACCTG+CGG | 0.665975 | 8.1:+40508337 | MS.gene63265:CDS |
| CCTCTGCTAAGAACTGAAGG+TGG | 0.671195 | 8.1:-40510024 | None:intergenic |
| GATCGTGCCGGAATTATAGG+TGG | 0.686788 | 8.1:+40509356 | MS.gene63265:CDS |
| AAATTTGAGAAGATAATGAG+GGG | 0.699765 | 8.1:+40508545 | MS.gene63265:CDS |
| TGACATTGTGAATCCTCATG+AGG | 0.715159 | 8.1:+40508424 | MS.gene63265:CDS |
| TTAAGTAACTTACGCCATGG+AGG | 0.719479 | 8.1:-40507641 | None:intergenic |
| GTCCCGTATCCCTTTCAATG+GGG | 0.733559 | 8.1:+40509561 | MS.gene63265:CDS |
| CTGATATTTGAACAACCCTG+CGG | 0.734987 | 8.1:-40510463 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTATAATTATAAAACATAT+GGG | - | chr8.1:40508977-40508996 | None:intergenic | 10.0% |
| !! | TATTATCAATTTAAATAAGT+TGG | + | chr8.1:40510953-40510972 | MS.gene63265:intron | 10.0% |
| !! | TTATATTGCATAAAAATTAA+AGG | - | chr8.1:40511232-40511251 | None:intergenic | 10.0% |
| !! | TTGAAATTATTTAAATTTCA+AGG | - | chr8.1:40508746-40508765 | None:intergenic | 10.0% |
| !! | AATTCTATGTAACATAATAT+TGG | + | chr8.1:40510390-40510409 | MS.gene63265:intron | 15.0% |
| !! | AATTTCAAAAAAATGTATGT+TGG | + | chr8.1:40508758-40508777 | MS.gene63265:intron | 15.0% |
| !! | CGTTATAATTATAAAACATA+TGG | - | chr8.1:40508978-40508997 | None:intergenic | 15.0% |
| !! | TACTATATATAGATGAAATA+TGG | - | chr8.1:40509134-40509153 | None:intergenic | 15.0% |
| !! | TATATATATGTAGGAAAATT+TGG | + | chr8.1:40510857-40510876 | MS.gene63265:intron | 15.0% |
| !! | TGGTTATTAATATTATTGTT+TGG | + | chr8.1:40508208-40508227 | MS.gene63265:intron | 15.0% |
| !!! | AGGTATATTTATTGTTATTT+TGG | + | chr8.1:40509649-40509668 | MS.gene63265:intron | 15.0% |
| !!! | TATTTTTTTTCTAATAGTGT+AGG | + | chr8.1:40510367-40510386 | MS.gene63265:intron | 15.0% |
| !! | AAAATAATCGAAATAGTTGT+TGG | - | chr8.1:40508389-40508408 | None:intergenic | 20.0% |
| !! | ATGGATCATTATATATATGT+AGG | + | chr8.1:40510848-40510867 | MS.gene63265:intron | 20.0% |
| !! | GCTAAAAATTAAAAAACAGT+CGG | + | chr8.1:40510579-40510598 | MS.gene63265:intron | 20.0% |
| !! | GTAATACAATAAGAAACATT+TGG | - | chr8.1:40507614-40507633 | None:intergenic | 20.0% |
| !! | GTCAATAGTTTCTTATAATA+AGG | - | chr8.1:40510644-40510663 | None:intergenic | 20.0% |
| !! | TGTTTAAATTGCAAAATTGA+AGG | - | chr8.1:40511076-40511095 | None:intergenic | 20.0% |
| !! | TTCATGAATATGATAATATG+AGG | - | chr8.1:40508816-40508835 | None:intergenic | 20.0% |
| !!! | AAAAACTTGTTTAGATTGAA+AGG | - | chr8.1:40511673-40511692 | None:intergenic | 20.0% |
| !!! | AACAACTATTTCGATTATTT+TGG | + | chr8.1:40508388-40508407 | MS.gene63265:CDS | 20.0% |
| !!! | AACCATTTTGAGTATATTTT+TGG | + | chr8.1:40507676-40507695 | MS.gene63265:intron | 20.0% |
| !!! | AAGTTACTTAACTTTTTCAT+TGG | + | chr8.1:40507653-40507672 | MS.gene63265:intron | 20.0% |
| !!! | AATTCTATGTATTTTTGTTC+AGG | + | chr8.1:40508837-40508856 | MS.gene63265:intron | 20.0% |
| !!! | ATCTGTTTTATATTTAGAGT+CGG | - | chr8.1:40509783-40509802 | None:intergenic | 20.0% |
| !!! | GACTGTTTTTTAATTTTTAG+CGG | - | chr8.1:40510580-40510599 | None:intergenic | 20.0% |
| !!! | GTCAATTGTTTCTTATAATA+AGG | + | chr8.1:40510743-40510762 | MS.gene63265:intron | 20.0% |
| !!! | TTACTTCCATTTTTTCAAAT+CGG | - | chr8.1:40507838-40507857 | None:intergenic | 20.0% |
| !!! | TTTAGAACAAAATTCATCTT+AGG | + | chr8.1:40511098-40511117 | MS.gene63265:CDS | 20.0% |
| !!! | TTTTTAAATTCATTGTGTGA+GGG | - | chr8.1:40510723-40510742 | None:intergenic | 20.0% |
| ! | AAACATATGGGAAGAAAATA+AGG | - | chr8.1:40508965-40508984 | None:intergenic | 25.0% |
| ! | AAATTTGAGAAGATAATGAG+GGG | + | chr8.1:40508545-40508564 | MS.gene63265:CDS | 25.0% |
| ! | AAGTGAAAACAAAAAATGCA+TGG | - | chr8.1:40510094-40510113 | None:intergenic | 25.0% |
| ! | AATTTGAATCTCTAGTTGAA+AGG | - | chr8.1:40511416-40511435 | None:intergenic | 25.0% |
| ! | ACATAAAAAATCCTAATGTG+CGG | - | chr8.1:40510327-40510346 | None:intergenic | 25.0% |
| ! | AGAAATTTGAGAAGATAATG+AGG | + | chr8.1:40508543-40508562 | MS.gene63265:intron | 25.0% |
| ! | AGAATAGTTTAGCAAATTGA+AGG | + | chr8.1:40507968-40507987 | MS.gene63265:intron | 25.0% |
| ! | AGCCAAAAATATACTCAAAA+TGG | - | chr8.1:40507681-40507700 | None:intergenic | 25.0% |
| ! | AGTCTTAGAATCAATCTAAA+AGG | + | chr8.1:40508175-40508194 | MS.gene63265:intron | 25.0% |
| ! | CTAAAACACAAATTACATGT+AGG | + | chr8.1:40509330-40509349 | MS.gene63265:CDS | 25.0% |
| ! | GAAATTTGAGAAGATAATGA+GGG | + | chr8.1:40508544-40508563 | MS.gene63265:intron | 25.0% |
| ! | GTGTATTCATTGAAATATTG+TGG | - | chr8.1:40511152-40511171 | None:intergenic | 25.0% |
| ! | TAGTTTCTTATAATAAGGAC+CGG | - | chr8.1:40510639-40510658 | None:intergenic | 25.0% |
| ! | TGTAAAATTGTCAAATGCAA+CGG | - | chr8.1:40511277-40511296 | None:intergenic | 25.0% |
| ! | TTGAACCTAAAAAGTTGTTA+TGG | + | chr8.1:40510829-40510848 | MS.gene63265:intron | 25.0% |
| ! | TTGGTTCATAAATCTAATGA+AGG | + | chr8.1:40508227-40508246 | MS.gene63265:intron | 25.0% |
| !! | ACATTTTTCCAAACAACATT+TGG | + | chr8.1:40508320-40508339 | MS.gene63265:CDS | 25.0% |
| !! | ATAATGTTATCTGGAATCTT+TGG | + | chr8.1:40510203-40510222 | MS.gene63265:CDS | 25.0% |
| !! | ATAATTTCATGTTATTTGCG+AGG | + | chr8.1:40510271-40510290 | MS.gene63265:intron | 25.0% |
| !! | ATGATCCATAACAACTTTTT+AGG | - | chr8.1:40510837-40510856 | None:intergenic | 25.0% |
| !! | ATGATCTTTTTCTCAATTCT+TGG | + | chr8.1:40510494-40510513 | MS.gene63265:CDS | 25.0% |
| !! | CTTTTTAAATTCATTGTGTG+AGG | - | chr8.1:40510724-40510743 | None:intergenic | 25.0% |
| !! | GAGTTATTCTTTGTTTACAT+CGG | - | chr8.1:40511365-40511384 | None:intergenic | 25.0% |
| !! | GCTTACAAAATAAATTTTGC+AGG | + | chr8.1:40509532-40509551 | MS.gene63265:intron | 25.0% |
| !! | TAATGTTATCTGGAATCTTT+GGG | + | chr8.1:40510204-40510223 | MS.gene63265:CDS | 25.0% |
| !! | TTGTTTCTTATAATAAGGAC+CGG | + | chr8.1:40510748-40510767 | MS.gene63265:intron | 25.0% |
| !! | TTTGGTAATTGATCTTTAAC+CGG | - | chr8.1:40507596-40507615 | None:intergenic | 25.0% |
| !!! | ATTGTTATTTCGTATGTATC+AGG | + | chr8.1:40510172-40510191 | MS.gene63265:intron | 25.0% |
| !!! | ATTTTTTCAAATCGGTGTTT+AGG | - | chr8.1:40507830-40507849 | None:intergenic | 25.0% |
| !!! | CTACATGTAATTTGTGTTTT+AGG | - | chr8.1:40509332-40509351 | None:intergenic | 25.0% |
| !!! | TAAACACCGATTTGAAAAAA+TGG | + | chr8.1:40507829-40507848 | MS.gene63265:intron | 25.0% |
| !!! | TCTGTTTTATATTTAGAGTC+GGG | - | chr8.1:40509782-40509801 | None:intergenic | 25.0% |
| !!! | TTATTTTGTAAGCATCTGTT+TGG | - | chr8.1:40509525-40509544 | None:intergenic | 25.0% |
| !!! | TTGTTATTTCGTATGTATCA+GGG | + | chr8.1:40510173-40510192 | MS.gene63265:intron | 25.0% |
| AAAAAATGCATGGTTAGTGA+AGG | - | chr8.1:40510084-40510103 | None:intergenic | 30.0% | |
| AACAAACTACAATAGACACT+CGG | - | chr8.1:40509842-40509861 | None:intergenic | 30.0% | |
| AATCAAACACGTAAAGATAG+AGG | + | chr8.1:40511580-40511599 | MS.gene63265:CDS | 30.0% | |
| AATGATCAAGTGGTTTAGAT+AGG | - | chr8.1:40508663-40508682 | None:intergenic | 30.0% | |
| ACATGATGTTAGTAGATGAA+AGG | - | chr8.1:40509175-40509194 | None:intergenic | 30.0% | |
| AGTTTATAGATGAGAGCTTA+TGG | - | chr8.1:40509434-40509453 | None:intergenic | 30.0% | |
| ATGATCAAGTGGTTTAGATA+GGG | - | chr8.1:40508662-40508681 | None:intergenic | 30.0% | |
| CAATATAAAGCTGCAACTAT+TGG | - | chr8.1:40510908-40510927 | None:intergenic | 30.0% | |
| TACACTGCATTTAAAAGCTA+TGG | + | chr8.1:40511167-40511186 | MS.gene63265:CDS | 30.0% | |
| TATGCTTATCTTCTTACTGT+TGG | + | chr8.1:40509284-40509303 | MS.gene63265:CDS | 30.0% | |
| TCAACACTTCAAATTGTTCT+TGG | + | chr8.1:40508593-40508612 | MS.gene63265:CDS | 30.0% | |
| TCAAGAGTAAACTTTCTGTT+TGG | + | chr8.1:40507759-40507778 | MS.gene63265:intron | 30.0% | |
| TCATCACGAATTTAGTACAT+AGG | + | chr8.1:40508711-40508730 | MS.gene63265:intron | 30.0% | |
| TTACCTGTGAAAATACTACT+AGG | - | chr8.1:40509082-40509101 | None:intergenic | 30.0% | |
| TTGTATCTGTCTTGAATGAA+CGG | - | chr8.1:40511627-40511646 | None:intergenic | 30.0% | |
| ! | CTTTGTTTGATGTTTCTTGT+TGG | + | chr8.1:40510804-40510823 | MS.gene63265:intron | 30.0% |
| ! | CTTTTATGTTAATGAAGCTG+AGG | + | chr8.1:40508057-40508076 | MS.gene63265:intron | 30.0% |
| ! | TCGATTTGCAGTTATATTCT+CGG | + | chr8.1:40509244-40509263 | MS.gene63265:CDS | 30.0% |
| ! | TTAGGCTTCTCTATTTTCAT+GGG | + | chr8.1:40511116-40511135 | MS.gene63265:CDS | 30.0% |
| !! | AAGTGTTGAAGCAACTATAA+GGG | - | chr8.1:40508582-40508601 | None:intergenic | 30.0% |
| !! | TCTTGGTAAGATTTTAATGC+TGG | + | chr8.1:40510511-40510530 | MS.gene63265:intron | 30.0% |
| !!! | ACATCTTTTGGAACATTACA+TGG | + | chr8.1:40507731-40507750 | MS.gene63265:intron | 30.0% |
| !!! | ACTATTTCGATTATTTTGGC+TGG | + | chr8.1:40508392-40508411 | MS.gene63265:CDS | 30.0% |
| AAGATGTGATATGAGGAAGA+AGG | - | chr8.1:40507718-40507737 | None:intergenic | 35.0% | |
| AAGTTAAGTAACTTACGCCA+TGG | - | chr8.1:40507647-40507666 | None:intergenic | 35.0% | |
| AATTGATCTTTAACCGGATG+TGG | - | chr8.1:40507590-40507609 | None:intergenic | 35.0% | |
| ACAAATGCTTCTGATGCAAA+TGG | - | chr8.1:40511511-40511530 | None:intergenic | 35.0% | |
| ACTACTAGGATGATGATTTC+TGG | - | chr8.1:40509068-40509087 | None:intergenic | 35.0% | |
| ACTGCAAATCGATCAAAGAT+AGG | - | chr8.1:40509236-40509255 | None:intergenic | 35.0% | |
| AGCTCATATACACTGATAAG+TGG | - | chr8.1:40509908-40509927 | None:intergenic | 35.0% | |
| AGGCTCAATCATGATTCAAT+AGG | + | chr8.1:40508247-40508266 | MS.gene63265:intron | 35.0% | |
| ATCTAAAAGGAAGAAGCAAG+TGG | + | chr8.1:40508188-40508207 | MS.gene63265:intron | 35.0% | |
| ATTTGCAGTTATATTCTCGG+TGG | + | chr8.1:40509247-40509266 | MS.gene63265:CDS | 35.0% | |
| CAAATGCTTCTGATGCAAAT+GGG | - | chr8.1:40511510-40511529 | None:intergenic | 35.0% | |
| CAAGGAACAAAGATTTGTCA+AGG | - | chr8.1:40511461-40511480 | None:intergenic | 35.0% | |
| GAAAGAGCAAAATGATCAAG+TGG | - | chr8.1:40508673-40508692 | None:intergenic | 35.0% | |
| GATTCAGACTCTACTATTTG+TGG | + | chr8.1:40508286-40508305 | MS.gene63265:CDS | 35.0% | |
| GCGTATCTGAGTTTATCTAT+TGG | - | chr8.1:40509498-40509517 | None:intergenic | 35.0% | |
| GGTAATGTTGAAAACCAAGT+AGG | - | chr8.1:40508087-40508106 | None:intergenic | 35.0% | |
| GTAAAGATAGAGGAATGCAT+TGG | + | chr8.1:40511590-40511609 | MS.gene63265:CDS | 35.0% | |
| GTATGAATTTGGATTTCCTG+TGG | + | chr8.1:40508913-40508932 | MS.gene63265:CDS | 35.0% | |
| GTTCATTCAAGACAGATACA+AGG | + | chr8.1:40511626-40511645 | MS.gene63265:CDS | 35.0% | |
| GTTCCAAAAGATGTGATATG+AGG | - | chr8.1:40507725-40507744 | None:intergenic | 35.0% | |
| TACATTCCTCACATGATGAA+AGG | + | chr8.1:40509203-40509222 | MS.gene63265:CDS | 35.0% | |
| TACCCACATATGCAAAGAAA+AGG | - | chr8.1:40510931-40510950 | None:intergenic | 35.0% | |
| TCAAATGCAACGGTTAATGT+AGG | - | chr8.1:40511267-40511286 | None:intergenic | 35.0% | |
| TTCATTAGTTGCTCTAGTAG+AGG | + | chr8.1:40509629-40509648 | MS.gene63265:CDS | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | + | chr8.1:40510752-40510771 | MS.gene63265:intron | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | - | chr8.1:40510771-40510752 | None:intergenic | 35.0% | |
| TTTCAACTTAGTCCTTACCA+AGG | - | chr8.1:40509386-40509405 | None:intergenic | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | + | chr8.1:40510751-40510770 | MS.gene63265:intron | 35.0% | |
| TTTCTTATAATAAGGACCGG+AGG | - | chr8.1:40510770-40510751 | None:intergenic | 35.0% | |
| ! | ATTATAGCTTGCAAAATGCG+TGG | + | chr8.1:40509031-40509050 | MS.gene63265:intron | 35.0% |
| ! | CAGAGTATTAGATGCAACAA+AGG | - | chr8.1:40509935-40509954 | None:intergenic | 35.0% |
| ! | CATCCTAGTAGTATTTTCAC+AGG | + | chr8.1:40509076-40509095 | MS.gene63265:CDS | 35.0% |
| ! | CTTAGGCTTCTCTATTTTCA+TGG | + | chr8.1:40511115-40511134 | MS.gene63265:CDS | 35.0% |
| ! | CTTCCTCATATCACATCTTT+TGG | + | chr8.1:40507719-40507738 | MS.gene63265:intron | 35.0% |
| ! | TCACAACTACATGAGCTTTT+AGG | - | chr8.1:40509722-40509741 | None:intergenic | 35.0% |
| ! | TGCCTTTTCTTTGCATATGT+GGG | + | chr8.1:40510926-40510945 | MS.gene63265:CDS | 35.0% |
| ! | TTATGTTTCTGCGACTGTAA+TGG | + | chr8.1:40510341-40510360 | MS.gene63265:intron | 35.0% |
| ! | TTGCCTTTTCTTTGCATATG+TGG | + | chr8.1:40510925-40510944 | MS.gene63265:CDS | 35.0% |
| ! | TTTTCATGTTGACACTACAC+AGG | + | chr8.1:40511032-40511051 | MS.gene63265:intron | 35.0% |
| ! | TTTTCTCCTTTCATCATGTG+AGG | - | chr8.1:40509212-40509231 | None:intergenic | 35.0% |
| ! | TTTTTCTTCAGAGAGAATGC+AGG | + | chr8.1:40510413-40510432 | MS.gene63265:intron | 35.0% |
| !! | ATTTGGTGTCTATGCTTCAT+AGG | - | chr8.1:40507793-40507812 | None:intergenic | 35.0% |
| !! | CAAATTGTTCTTGGCTTTAG+TGG | + | chr8.1:40508602-40508621 | MS.gene63265:CDS | 35.0% |
| !! | GAAGTGTTGAAGCAACTATA+AGG | - | chr8.1:40508583-40508602 | None:intergenic | 35.0% |
| !! | TGGTGAAACTTTTGCTATGA+TGG | + | chr8.1:40509602-40509621 | MS.gene63265:CDS | 35.0% |
| AAGATAATGAGGGGAACACA+GGG | + | chr8.1:40508554-40508573 | MS.gene63265:CDS | 40.0% | |
| AAGATAGAGGAATGCATTGG+TGG | + | chr8.1:40511593-40511612 | MS.gene63265:CDS | 40.0% | |
| AGATGAACTTCTTCCACATC+CGG | + | chr8.1:40507574-40507593 | MS.gene63265:CDS | 40.0% | |
| AGGGTTGTTCAAATATCAGC+TGG | + | chr8.1:40510467-40510486 | MS.gene63265:CDS | 40.0% | |
| AGGTGTCAGTGTCTTGTATT+TGG | - | chr8.1:40507810-40507829 | None:intergenic | 40.0% | |
| ATGCAACGGTTAATGTAGGA+CGG | - | chr8.1:40511263-40511282 | None:intergenic | 40.0% | |
| ATGTGATATGAGGAAGAAGG+AGG | - | chr8.1:40507715-40507734 | None:intergenic | 40.0% | |
| ATTGTGAATCCTCATGAGGT+TGG | + | chr8.1:40508428-40508447 | MS.gene63265:intron | 40.0% | |
| ATTTCGTATGTATCAGGGAG+TGG | + | chr8.1:40510178-40510197 | MS.gene63265:intron | 40.0% | |
| CAACATTACCTTGTGATGCT+TGG | + | chr8.1:40508097-40508116 | MS.gene63265:CDS | 40.0% | |
| CATGTCATTGAACTGTCACA+AGG | - | chr8.1:40511479-40511498 | None:intergenic | 40.0% | |
| CTAAGAACTGAAGGTGGAAT+TGG | - | chr8.1:40510021-40510040 | None:intergenic | 40.0% | |
| CTGATATTTGAACAACCCTG+CGG | - | chr8.1:40510466-40510485 | None:intergenic | 40.0% | |
| CTTGCAAAATGCGTGGAAAT+TGG | + | chr8.1:40509038-40509057 | MS.gene63265:CDS | 40.0% | |
| GACGAGTTCCAAATGTTGTT+TGG | - | chr8.1:40508331-40508350 | None:intergenic | 40.0% | |
| GCTTATCTTCTTACTGTTGG+TGG | + | chr8.1:40509287-40509306 | MS.gene63265:CDS | 40.0% | |
| GGAGTGGGAATAATGTTATC+TGG | + | chr8.1:40510194-40510213 | MS.gene63265:CDS | 40.0% | |
| GTCTATGCTTCATAGGTCTA+CGG | - | chr8.1:40507786-40507805 | None:intergenic | 40.0% | |
| GTTGCAAATATGCATACCAC+AGG | - | chr8.1:40508932-40508951 | None:intergenic | 40.0% | |
| GTTTCACCAGCATCAAATGT+TGG | - | chr8.1:40509591-40509610 | None:intergenic | 40.0% | |
| TGACATTGTGAATCCTCATG+AGG | + | chr8.1:40508424-40508443 | MS.gene63265:CDS | 40.0% | |
| TGATTATGTAGTACTCCCTC+CGG | - | chr8.1:40510770-40510789 | None:intergenic | 40.0% | |
| TTAAGTAACTTACGCCATGG+AGG | - | chr8.1:40507644-40507663 | None:intergenic | 40.0% | |
| TTTCGTATGTATCAGGGAGT+GGG | + | chr8.1:40510179-40510198 | MS.gene63265:intron | 40.0% | |
| TTTCTTGTTCCACAGTCAAC+AGG | + | chr8.1:40509958-40509977 | MS.gene63265:intron | 40.0% | |
| ! | AGATAGAGGAATGCATTGGT+GGG | + | chr8.1:40511594-40511613 | MS.gene63265:CDS | 40.0% |
| ! | AGTTGTTGGCACAAAAGTGT+AGG | - | chr8.1:40508375-40508394 | None:intergenic | 40.0% |
| ! | GGAAGAAGTTCATCTAGCTT+TGG | - | chr8.1:40507569-40507588 | None:intergenic | 40.0% |
| ! | GTTATCTGGAATCTTTGGGA+CGG | + | chr8.1:40510208-40510227 | MS.gene63265:CDS | 40.0% |
| !! | AGTTCATCTAGCTTTGGTTG+TGG | - | chr8.1:40507563-40507582 | None:intergenic | 40.0% |
| !! | GGCTTTGGACTGTATGAATT+TGG | + | chr8.1:40508902-40508921 | MS.gene63265:CDS | 40.0% |
| !! | TTATCTGGAATCTTTGGGAC+GGG | + | chr8.1:40510209-40510228 | MS.gene63265:CDS | 40.0% |
| !! | TTCTTGGCTTTAGTGGACTT+TGG | + | chr8.1:40508609-40508628 | MS.gene63265:CDS | 40.0% |
| AAAGCTGCAACTATTGGTGC+TGG | - | chr8.1:40510902-40510921 | None:intergenic | 45.0% | |
| ACACCTCTGCTAAGAACTGA+AGG | - | chr8.1:40510030-40510049 | None:intergenic | 45.0% | |
| ACAGATCGTGCCGGAATTAT+AGG | + | chr8.1:40509353-40509372 | MS.gene63265:CDS | 45.0% | |
| ACGACTTTATCTACTCCCTC+CGG | + | chr8.1:40510617-40510636 | MS.gene63265:intron | 45.0% | |
| AGTCCCGTATCCCTTTCAAT+GGG | + | chr8.1:40509560-40509579 | MS.gene63265:CDS | 45.0% | |
| CAGACTCTACTATTTGTGGC+TGG | + | chr8.1:40508290-40508309 | MS.gene63265:CDS | 45.0% | |
| CAGTTGTACCAAGCATCACA+AGG | - | chr8.1:40508108-40508127 | None:intergenic | 45.0% | |
| GAAGATAATGAGGGGAACAC+AGG | + | chr8.1:40508553-40508572 | MS.gene63265:CDS | 45.0% | |
| GAATTATAGGTGGTGCTCCT+TGG | + | chr8.1:40509366-40509385 | MS.gene63265:CDS | 45.0% | |
| GTATTACAAGTCCTCCTCCA+TGG | + | chr8.1:40507627-40507646 | MS.gene63265:CDS | 45.0% | |
| GTGCTTTCATTGCTGTGTCA+AGG | + | chr8.1:40509980-40509999 | MS.gene63265:CDS | 45.0% | |
| TACAATAGACACTCGGCTCT+CGG | - | chr8.1:40509835-40509854 | None:intergenic | 45.0% | |
| TATTCTCGGTGGCAATTGTG+TGG | + | chr8.1:40509258-40509277 | MS.gene63265:CDS | 45.0% | |
| ! | ATTTGGAACTCGTCTACCTG+CGG | + | chr8.1:40508337-40508356 | MS.gene63265:CDS | 45.0% |
| ! | CATCGGTGTCTCTAGTTGAA+AGG | - | chr8.1:40511348-40511367 | None:intergenic | 45.0% |
| ! | TCAGTTCTTAGCAGAGGTGT+AGG | + | chr8.1:40510030-40510049 | MS.gene63265:CDS | 45.0% |
| ! | TTCTTAGCAGAGGTGTAGGT+TGG | + | chr8.1:40510034-40510053 | MS.gene63265:CDS | 45.0% |
| !! | AGGAGCACCACCTATAATTC+CGG | - | chr8.1:40509366-40509385 | None:intergenic | 45.0% |
| !! | ATGAAAGCACCTGTTGACTG+TGG | - | chr8.1:40509970-40509989 | None:intergenic | 45.0% |
| !! | GACTCTCGCTCTTTTGATTG+TGG | + | chr8.1:40509001-40509020 | MS.gene63265:intron | 45.0% |
| !! | GCAACTAAGCAGCACTGATA+TGG | + | chr8.1:40510533-40510552 | MS.gene63265:intron | 45.0% |
| !! | TATCTGGAATCTTTGGGACG+GGG | + | chr8.1:40510210-40510229 | MS.gene63265:CDS | 45.0% |
| AAGCCTGAGAGAGCAACCAA+TGG | - | chr8.1:40508887-40508906 | None:intergenic | 50.0% | |
| AAGCTCTCTAGTCCCTCAGA+TGG | + | chr8.1:40508138-40508157 | MS.gene63265:CDS | 50.0% | |
| ACATGTAGGACAGATCGTGC+CGG | + | chr8.1:40509344-40509363 | MS.gene63265:CDS | 50.0% | |
| ACATTTCCTCCTCCCATCTG+AGG | - | chr8.1:40508154-40508173 | None:intergenic | 50.0% | |
| ACCAATGGAACAGCAGAGAG+AGG | - | chr8.1:40508872-40508891 | None:intergenic | 50.0% | |
| ACTCGTCTACCTGCGGTTAT+TGG | + | chr8.1:40508344-40508363 | MS.gene63265:CDS | 50.0% | |
| AGCGGTGTGACTATCGTGTT+TGG | - | chr8.1:40510562-40510581 | None:intergenic | 50.0% | |
| AGCTCTCTAGTCCCTCAGAT+GGG | + | chr8.1:40508139-40508158 | MS.gene63265:CDS | 50.0% | |
| AGTAACTTACGCCATGGAGG+AGG | - | chr8.1:40507641-40507660 | None:intergenic | 50.0% | |
| ATAGGTGGTGCTCCTTGGTA+AGG | + | chr8.1:40509371-40509390 | MS.gene63265:intron | 50.0% | |
| ATCTGAGGGACTAGAGAGCT+TGG | - | chr8.1:40508139-40508158 | None:intergenic | 50.0% | |
| CAACGGTTAATGTAGGACGG+AGG | - | chr8.1:40511260-40511279 | None:intergenic | 50.0% | |
| CATTTCCTCCTCCCATCTGA+GGG | - | chr8.1:40508153-40508172 | None:intergenic | 50.0% | |
| CCACCTTCAGTTCTTAGCAG+AGG | + | chr8.1:40510024-40510043 | MS.gene63265:CDS | 50.0% | |
| CCTCTGCTAAGAACTGAAGG+TGG | - | chr8.1:40510027-40510046 | None:intergenic | 50.0% | |
| CTCCCCATTGAAAGGGATAC+GGG | - | chr8.1:40509566-40509585 | None:intergenic | 50.0% | |
| GAAGCTGAGGCAATCCTACT+TGG | + | chr8.1:40508070-40508089 | MS.gene63265:intron | 50.0% | |
| GACTTTGGCGCAATGTAGTG+AGG | + | chr8.1:40508624-40508643 | MS.gene63265:CDS | 50.0% | |
| GAGTCCCGTATCCCTTTCAA+TGG | + | chr8.1:40509559-40509578 | MS.gene63265:CDS | 50.0% | |
| GATCGTGCCGGAATTATAGG+TGG | + | chr8.1:40509356-40509375 | MS.gene63265:CDS | 50.0% | |
| GCTCCCCATTGAAAGGGATA+CGG | - | chr8.1:40509567-40509586 | None:intergenic | 50.0% | |
| GGAGCTCCAACATTTGATGC+TGG | + | chr8.1:40509582-40509601 | MS.gene63265:CDS | 50.0% | |
| GTCCCGTATCCCTTTCAATG+GGG | + | chr8.1:40509561-40509580 | MS.gene63265:CDS | 50.0% | |
| GTTGGAGCTCCCCATTGAAA+GGG | - | chr8.1:40509573-40509592 | None:intergenic | 50.0% | |
| TAGGATCCTCCAATAACCGC+AGG | - | chr8.1:40508356-40508375 | None:intergenic | 50.0% | |
| TCCTCTCTCTGCTGTTCCAT+TGG | + | chr8.1:40508868-40508887 | MS.gene63265:CDS | 50.0% | |
| TCTCACTTCAGCCGCACATT+AGG | + | chr8.1:40510313-40510332 | MS.gene63265:intron | 50.0% | |
| TGACACTACACAGGTTCTGC+AGG | + | chr8.1:40511041-40511060 | MS.gene63265:intron | 50.0% | |
| TGCGACAAACCAACCTCATG+AGG | - | chr8.1:40508440-40508459 | None:intergenic | 50.0% | |
| TGTACACACTCGCGCAAGAT+GGG | + | chr8.1:40511193-40511212 | MS.gene63265:CDS | 50.0% | |
| TGTTGGAGCTCCCCATTGAA+AGG | - | chr8.1:40509574-40509593 | None:intergenic | 50.0% | |
| TTGGTTGCTCTCTCAGGCTT+TGG | + | chr8.1:40508887-40508906 | MS.gene63265:CDS | 50.0% | |
| ! | GTTCCATTGGTTGCTCTCTC+AGG | + | chr8.1:40508881-40508900 | MS.gene63265:CDS | 50.0% |
| !! | CTCTTAGCTTTGACGCGTGT+AGG | + | chr8.1:40510437-40510456 | MS.gene63265:CDS | 50.0% |
| CATCTTGCGCGAGTGTGTAC+AGG | - | chr8.1:40511194-40511213 | None:intergenic | 55.0% | |
| CGTCTACCTGCGGTTATTGG+AGG | + | chr8.1:40508347-40508366 | MS.gene63265:CDS | 55.0% | |
| CTGTACACACTCGCGCAAGA+TGG | + | chr8.1:40511192-40511211 | MS.gene63265:CDS | 55.0% | |
| TCTCTAGTCCCTCAGATGGG+AGG | + | chr8.1:40508142-40508161 | MS.gene63265:CDS | 55.0% | |
| ! | TAGCAGAGGTGTAGGTTGGC+AGG | + | chr8.1:40510038-40510057 | MS.gene63265:CDS | 55.0% |
| !! | GGAATCTTTGGGACGGGGAA+TGG | + | chr8.1:40510215-40510234 | MS.gene63265:CDS | 55.0% |
| CTAGTCCCTCAGATGGGAGG+AGG | + | chr8.1:40508145-40508164 | MS.gene63265:CDS | 60.0% | |
| GTGGATAGACACTCGAGCGC+AGG | - | chr8.1:40509889-40509908 | None:intergenic | 60.0% | |
| GACGCGTGTAGGTAGCCGCA+GGG | + | chr8.1:40510448-40510467 | MS.gene63265:CDS | 65.0% | |
| TGACGCGTGTAGGTAGCCGC+AGG | + | chr8.1:40510447-40510466 | MS.gene63265:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 40507539 | 40511705 | 40507539 | ID=MS.gene63265 |
| chr8.1 | mRNA | 40507539 | 40511705 | 40507539 | ID=MS.gene63265.t1;Parent=MS.gene63265 |
| chr8.1 | exon | 40507539 | 40507650 | 40507539 | ID=MS.gene63265.t1.exon1;Parent=MS.gene63265.t1 |
| chr8.1 | CDS | 40507539 | 40507650 | 40507539 | ID=cds.MS.gene63265.t1;Parent=MS.gene63265.t1 |
| chr8.1 | exon | 40508074 | 40508171 | 40508074 | ID=MS.gene63265.t1.exon2;Parent=MS.gene63265.t1 |
| chr8.1 | CDS | 40508074 | 40508171 | 40508074 | ID=cds.MS.gene63265.t1;Parent=MS.gene63265.t1 |
| chr8.1 | exon | 40508269 | 40508445 | 40508269 | ID=MS.gene63265.t1.exon3;Parent=MS.gene63265.t1 |
| chr8.1 | CDS | 40508269 | 40508445 | 40508269 | ID=cds.MS.gene63265.t1;Parent=MS.gene63265.t1 |
| chr8.1 | exon | 40508545 | 40508645 | 40508545 | ID=MS.gene63265.t1.exon4;Parent=MS.gene63265.t1 |
| chr8.1 | CDS | 40508545 | 40508645 | 40508545 | ID=cds.MS.gene63265.t1;Parent=MS.gene63265.t1 |
| chr8.1 | exon | 40508859 | 40508934 | 40508859 | ID=MS.gene63265.t1.exon5;Parent=MS.gene63265.t1 |
| chr8.1 | CDS | 40508859 | 40508934 | 40508859 | ID=cds.MS.gene63265.t1;Parent=MS.gene63265.t1 |
| chr8.1 | exon | 40509038 | 40509097 | 40509038 | ID=MS.gene63265.t1.exon6;Parent=MS.gene63265.t1 |
| chr8.1 | CDS | 40509038 | 40509097 | 40509038 | ID=cds.MS.gene63265.t1;Parent=MS.gene63265.t1 |
| chr8.1 | exon | 40509203 | 40509387 | 40509203 | ID=MS.gene63265.t1.exon7;Parent=MS.gene63265.t1 |
| chr8.1 | CDS | 40509203 | 40509387 | 40509203 | ID=cds.MS.gene63265.t1;Parent=MS.gene63265.t1 |
| chr8.1 | exon | 40509554 | 40509650 | 40509554 | ID=MS.gene63265.t1.exon8;Parent=MS.gene63265.t1 |
| chr8.1 | CDS | 40509554 | 40509650 | 40509554 | ID=cds.MS.gene63265.t1;Parent=MS.gene63265.t1 |
| chr8.1 | exon | 40509973 | 40510059 | 40509973 | ID=MS.gene63265.t1.exon9;Parent=MS.gene63265.t1 |
| chr8.1 | CDS | 40509973 | 40510059 | 40509973 | ID=cds.MS.gene63265.t1;Parent=MS.gene63265.t1 |
| chr8.1 | exon | 40510194 | 40510252 | 40510194 | ID=MS.gene63265.t1.exon10;Parent=MS.gene63265.t1 |
| chr8.1 | CDS | 40510194 | 40510252 | 40510194 | ID=cds.MS.gene63265.t1;Parent=MS.gene63265.t1 |
| chr8.1 | exon | 40510424 | 40510515 | 40510424 | ID=MS.gene63265.t1.exon11;Parent=MS.gene63265.t1 |
| chr8.1 | CDS | 40510424 | 40510515 | 40510424 | ID=cds.MS.gene63265.t1;Parent=MS.gene63265.t1 |
| chr8.1 | exon | 40510870 | 40510947 | 40510870 | ID=MS.gene63265.t1.exon12;Parent=MS.gene63265.t1 |
| chr8.1 | CDS | 40510870 | 40510947 | 40510870 | ID=cds.MS.gene63265.t1;Parent=MS.gene63265.t1 |
| chr8.1 | exon | 40511054 | 40511214 | 40511054 | ID=MS.gene63265.t1.exon13;Parent=MS.gene63265.t1 |
| chr8.1 | CDS | 40511054 | 40511214 | 40511054 | ID=cds.MS.gene63265.t1;Parent=MS.gene63265.t1 |
| chr8.1 | exon | 40511487 | 40511705 | 40511487 | ID=MS.gene63265.t1.exon14;Parent=MS.gene63265.t1 |
| chr8.1 | CDS | 40511487 | 40511705 | 40511487 | ID=cds.MS.gene63265.t1;Parent=MS.gene63265.t1 |
| Gene Sequence |
| Protein sequence |
