Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63883.t1 | XP_003617710.2 | 89.7 | 503 | 46 | 1 | 1 | 497 | 1 | 503 | 9.90E-122 | 447.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63883.t1 | Q9FM80 | 71.8 | 464 | 108 | 3 | 42 | 496 | 46 | 495 | 2.2e-69 | 264.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63883.t1 | G7K4F3 | 89.7 | 503 | 46 | 1 | 1 | 497 | 1 | 503 | 7.2e-122 | 447.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene63883.t1 | TR | mTERF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene63883 | 0.803908 | 2.78E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene63883 | 0.813702 | 2.24E-51 | -1.69E-46 |
| MS.gene050226 | MS.gene63883 | 0.835135 | 2.00E-56 | -1.69E-46 |
| MS.gene050227 | MS.gene63883 | 0.832614 | 8.55E-56 | -1.69E-46 |
| MS.gene050228 | MS.gene63883 | 0.841592 | 4.33E-58 | -1.69E-46 |
| MS.gene050426 | MS.gene63883 | -0.826021 | 3.41E-54 | -1.69E-46 |
| MS.gene050623 | MS.gene63883 | -0.83756 | 4.84E-57 | -1.69E-46 |
| MS.gene050642 | MS.gene63883 | 0.881292 | 2.71E-70 | -1.69E-46 |
| MS.gene051257 | MS.gene63883 | 0.808803 | 2.59E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene63883 | 0.869268 | 3.52E-66 | -1.69E-46 |
| MS.gene052011 | MS.gene63883 | -0.803873 | 2.83E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene63883 | 0.860526 | 1.94E-63 | -1.69E-46 |
| MS.gene052176 | MS.gene63883 | 0.844418 | 7.65E-59 | -1.69E-46 |
| MS.gene052188 | MS.gene63883 | 0.801495 | 8.76E-49 | -1.69E-46 |
| MS.gene052309 | MS.gene63883 | -0.814198 | 1.74E-51 | -1.69E-46 |
| MS.gene052389 | MS.gene63883 | 0.833287 | 5.82E-56 | -1.69E-46 |
| MS.gene052600 | MS.gene63883 | 0.81904 | 1.43E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene63883 | 0.822669 | 2.09E-53 | -1.69E-46 |
| MS.gene054349 | MS.gene63883 | 0.808357 | 3.22E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene63883 | 0.845486 | 3.94E-59 | -1.69E-46 |
| MS.gene054942 | MS.gene63883 | 0.813776 | 2.16E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene63883 | 0.827614 | 1.42E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene63883 | 0.822811 | 1.94E-53 | -1.69E-46 |
| MS.gene056087 | MS.gene63883 | 0.83131 | 1.79E-55 | -1.69E-46 |
| MS.gene056979 | MS.gene63883 | 0.858975 | 5.69E-63 | -1.69E-46 |
| MS.gene05761 | MS.gene63883 | 0.821338 | 4.26E-53 | -1.69E-46 |
| MS.gene058142 | MS.gene63883 | 0.839698 | 1.36E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene63883 | 0.815039 | 1.13E-51 | -1.69E-46 |
| MS.gene058710 | MS.gene63883 | 0.83236 | 9.89E-56 | -1.69E-46 |
| MS.gene059247 | MS.gene63883 | 0.800909 | 1.16E-48 | -1.69E-46 |
| MS.gene059285 | MS.gene63883 | 0.820619 | 6.23E-53 | -1.69E-46 |
| MS.gene059511 | MS.gene63883 | 0.808938 | 2.42E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene63883 | 0.820335 | 7.24E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63883.t1 | MTR_5g094610 | 96.620 | 503 | 11 | 2 | 1 | 497 | 1 | 503 | 0.0 | 976 |
| MS.gene63883.t1 | MTR_2g034600 | 32.456 | 228 | 139 | 7 | 224 | 445 | 215 | 433 | 3.12e-26 | 112 |
| MS.gene63883.t1 | MTR_2g034600 | 30.256 | 195 | 125 | 5 | 253 | 443 | 208 | 395 | 2.52e-17 | 85.1 |
| MS.gene63883.t1 | MTR_2g034600 | 27.556 | 225 | 134 | 6 | 179 | 397 | 277 | 478 | 3.41e-17 | 84.7 |
| MS.gene63883.t1 | MTR_2g034600 | 32.456 | 228 | 139 | 7 | 224 | 445 | 276 | 494 | 4.24e-26 | 112 |
| MS.gene63883.t1 | MTR_2g034600 | 27.706 | 231 | 137 | 7 | 173 | 397 | 333 | 539 | 3.14e-17 | 84.7 |
| MS.gene63883.t1 | MTR_2g034600 | 30.256 | 195 | 125 | 5 | 253 | 443 | 269 | 456 | 3.19e-17 | 84.7 |
| MS.gene63883.t1 | MTR_2g034600 | 32.456 | 228 | 139 | 7 | 224 | 445 | 280 | 498 | 4.40e-26 | 112 |
| MS.gene63883.t1 | MTR_2g034600 | 30.256 | 195 | 125 | 5 | 253 | 443 | 273 | 460 | 3.22e-17 | 84.7 |
| MS.gene63883.t1 | MTR_2g034600 | 27.706 | 231 | 137 | 7 | 173 | 397 | 337 | 543 | 3.34e-17 | 84.7 |
| MS.gene63883.t1 | MTR_5g068860 | 24.924 | 329 | 202 | 7 | 185 | 475 | 171 | 492 | 2.39e-25 | 109 |
| MS.gene63883.t1 | MTR_5g068860 | 25.263 | 190 | 136 | 3 | 215 | 404 | 134 | 317 | 3.13e-11 | 65.9 |
| MS.gene63883.t1 | MTR_2g067230 | 27.049 | 244 | 160 | 6 | 221 | 463 | 70 | 296 | 3.15e-25 | 106 |
| MS.gene63883.t1 | MTR_4g084630 | 28.571 | 266 | 176 | 6 | 182 | 442 | 42 | 298 | 3.85e-24 | 103 |
| MS.gene63883.t1 | MTR_4g084630 | 28.194 | 227 | 159 | 2 | 220 | 443 | 41 | 266 | 4.66e-19 | 88.6 |
| MS.gene63883.t1 | MTR_5g041630 | 29.319 | 191 | 132 | 1 | 255 | 445 | 88 | 275 | 7.33e-21 | 93.6 |
| MS.gene63883.t1 | MTR_6g003960 | 28.378 | 222 | 155 | 3 | 221 | 442 | 350 | 567 | 7.04e-20 | 93.2 |
| MS.gene63883.t1 | MTR_4g070060 | 23.630 | 292 | 185 | 5 | 188 | 443 | 277 | 566 | 1.70e-19 | 92.0 |
| MS.gene63883.t1 | MTR_4g070060 | 24.476 | 286 | 198 | 7 | 170 | 444 | 184 | 462 | 1.46e-12 | 70.5 |
| MS.gene63883.t1 | MTR_1g115415 | 22.526 | 293 | 216 | 7 | 152 | 440 | 143 | 428 | 1.12e-17 | 86.3 |
| MS.gene63883.t1 | MTR_1g115415 | 24.681 | 235 | 167 | 6 | 221 | 451 | 108 | 336 | 4.55e-15 | 77.8 |
| MS.gene63883.t1 | MTR_7g081270 | 25.984 | 254 | 173 | 7 | 219 | 469 | 42 | 283 | 4.25e-16 | 79.0 |
| MS.gene63883.t1 | MTR_2g049780 | 23.767 | 223 | 155 | 4 | 221 | 439 | 70 | 281 | 5.13e-16 | 79.3 |
| MS.gene63883.t1 | MTR_8g105560 | 25.789 | 190 | 137 | 4 | 221 | 408 | 86 | 273 | 8.12e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63883.t1 | AT5G55580 | 61.265 | 506 | 167 | 5 | 6 | 496 | 4 | 495 | 0.0 | 579 |
| MS.gene63883.t1 | AT5G55580 | 73.950 | 357 | 89 | 1 | 140 | 496 | 37 | 389 | 0.0 | 554 |
| MS.gene63883.t1 | AT5G55580 | 56.790 | 405 | 146 | 5 | 6 | 395 | 4 | 394 | 6.46e-141 | 411 |
| MS.gene63883.t1 | AT2G21710 | 26.148 | 283 | 199 | 5 | 189 | 468 | 320 | 595 | 1.46e-26 | 114 |
| MS.gene63883.t1 | AT2G21710 | 23.975 | 317 | 221 | 8 | 170 | 475 | 191 | 498 | 3.24e-13 | 72.4 |
| MS.gene63883.t1 | AT4G02990 | 24.096 | 332 | 205 | 6 | 183 | 475 | 177 | 500 | 4.00e-24 | 105 |
| MS.gene63883.t1 | AT4G02990 | 24.096 | 332 | 205 | 6 | 183 | 475 | 177 | 500 | 4.00e-24 | 105 |
| MS.gene63883.t1 | AT4G38160 | 27.068 | 266 | 180 | 6 | 183 | 442 | 43 | 300 | 3.86e-23 | 100 |
| MS.gene63883.t1 | AT4G38160 | 29.741 | 232 | 155 | 6 | 220 | 445 | 41 | 270 | 5.31e-21 | 94.4 |
| MS.gene63883.t1 | AT4G38160 | 27.068 | 266 | 180 | 6 | 183 | 442 | 43 | 300 | 3.86e-23 | 100 |
| MS.gene63883.t1 | AT4G38160 | 29.741 | 232 | 155 | 6 | 220 | 445 | 41 | 270 | 5.31e-21 | 94.4 |
| MS.gene63883.t1 | AT4G38160 | 27.068 | 266 | 180 | 6 | 183 | 442 | 43 | 300 | 4.50e-23 | 100 |
| MS.gene63883.t1 | AT4G38160 | 29.741 | 232 | 155 | 6 | 220 | 445 | 41 | 270 | 6.13e-21 | 94.7 |
| MS.gene63883.t1 | AT1G78930 | 27.650 | 217 | 153 | 3 | 226 | 442 | 342 | 554 | 1.15e-22 | 102 |
| MS.gene63883.t1 | AT1G78930 | 28.485 | 165 | 110 | 3 | 214 | 375 | 397 | 556 | 1.82e-14 | 76.3 |
| MS.gene63883.t1 | AT4G38160 | 27.068 | 266 | 180 | 6 | 183 | 442 | 43 | 300 | 1.29e-22 | 99.8 |
| MS.gene63883.t1 | AT4G38160 | 29.741 | 232 | 155 | 6 | 220 | 445 | 41 | 270 | 1.38e-20 | 94.0 |
| MS.gene63883.t1 | AT2G03050 | 26.339 | 224 | 155 | 5 | 221 | 442 | 33 | 248 | 1.19e-20 | 92.4 |
| MS.gene63883.t1 | AT2G03050 | 26.339 | 224 | 155 | 5 | 221 | 442 | 34 | 249 | 1.33e-20 | 92.4 |
| MS.gene63883.t1 | AT2G21710 | 24.481 | 241 | 175 | 4 | 189 | 426 | 320 | 556 | 3.49e-20 | 94.0 |
| MS.gene63883.t1 | AT2G21710 | 23.975 | 317 | 221 | 8 | 170 | 475 | 191 | 498 | 6.67e-13 | 71.2 |
| MS.gene63883.t1 | AT2G44020 | 25.424 | 295 | 182 | 5 | 186 | 444 | 145 | 437 | 4.39e-20 | 93.6 |
| MS.gene63883.t1 | AT2G44020 | 25.957 | 235 | 152 | 8 | 214 | 445 | 83 | 298 | 1.16e-11 | 67.4 |
| MS.gene63883.t1 | AT4G14605 | 26.484 | 219 | 154 | 5 | 224 | 442 | 236 | 447 | 5.88e-20 | 93.2 |
| MS.gene63883.t1 | AT4G14605 | 26.222 | 225 | 137 | 6 | 179 | 397 | 262 | 463 | 4.76e-14 | 74.7 |
| MS.gene63883.t1 | AT4G14605 | 26.484 | 219 | 154 | 5 | 224 | 442 | 236 | 447 | 5.88e-20 | 93.2 |
| MS.gene63883.t1 | AT4G14605 | 26.222 | 225 | 137 | 6 | 179 | 397 | 262 | 463 | 4.76e-14 | 74.7 |
| MS.gene63883.t1 | AT2G34620 | 26.389 | 216 | 145 | 4 | 254 | 465 | 85 | 290 | 9.31e-20 | 90.1 |
| MS.gene63883.t1 | AT2G21710 | 24.268 | 239 | 174 | 4 | 189 | 424 | 320 | 554 | 1.29e-19 | 92.4 |
| MS.gene63883.t1 | AT2G21710 | 23.975 | 317 | 221 | 8 | 170 | 475 | 191 | 498 | 6.01e-13 | 71.6 |
| MS.gene63883.t1 | AT2G36000 | 27.200 | 250 | 158 | 8 | 221 | 464 | 74 | 305 | 7.38e-19 | 88.2 |
| MS.gene63883.t1 | AT2G36000 | 27.200 | 250 | 158 | 8 | 221 | 464 | 74 | 305 | 8.47e-19 | 87.8 |
| MS.gene63883.t1 | AT3G18870 | 25.591 | 254 | 131 | 8 | 224 | 469 | 69 | 272 | 1.67e-16 | 80.1 |
Find 84 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAAGCACCTTTGGAATTA+AGG | 0.140140 | 5.1:+75846209 | MS.gene63883:CDS |
| AGCAATAATTTGCCCTATTT+TGG | 0.169836 | 5.1:-75846448 | None:intergenic |
| GACTCACGTTGCTTTCTTAA+TGG | 0.188627 | 5.1:+75846407 | MS.gene63883:CDS |
| CATCTTCACAATGCTCTCTT+TGG | 0.219102 | 5.1:-75846664 | None:intergenic |
| TGACTTCAATCTCTTGTCTT+TGG | 0.225373 | 5.1:-75845343 | None:intergenic |
| CGTTGCTTTCTTAATGGGCT+TGG | 0.237557 | 5.1:+75846413 | MS.gene63883:CDS |
| GGATGCTATTCTCTGACTTT+TGG | 0.242258 | 5.1:-75845711 | None:intergenic |
| ACATGTGCCTCTCATAAATT+TGG | 0.244120 | 5.1:-75846245 | None:intergenic |
| CTCCTTAGGAAATTTATTCT+TGG | 0.307382 | 5.1:-75846738 | None:intergenic |
| TCCAACGTATTGACATTTCA+TGG | 0.312784 | 5.1:+75846601 | MS.gene63883:CDS |
| ATCTTCACAATGCTCTCTTT+GGG | 0.327138 | 5.1:-75846663 | None:intergenic |
| GCTAAGGTACATCGGGTATT+TGG | 0.329609 | 5.1:-75847064 | None:intergenic |
| CCAAGAGGAAATGGTCCTTT+TGG | 0.331786 | 5.1:-75847147 | None:intergenic |
| CTTGATTACTTAAGCACCTT+TGG | 0.335021 | 5.1:+75846201 | MS.gene63883:CDS |
| TCGTCCTCGTCATAAGTTCT+TGG | 0.344950 | 5.1:+75847107 | MS.gene63883:CDS |
| ACTCACGTTGCTTTCTTAAT+GGG | 0.345489 | 5.1:+75846408 | MS.gene63883:CDS |
| GATGTACCTTAGCTTGTCTT+TGG | 0.348758 | 5.1:+75847074 | MS.gene63883:CDS |
| GGCGTACCTAGTACCAAAAT+AGG | 0.359195 | 5.1:+75846435 | MS.gene63883:CDS |
| TAGATTACTTGATGAGTCTT+GGG | 0.360371 | 5.1:+75846307 | MS.gene63883:CDS |
| GTTGCTTTCTTAATGGGCTT+GGG | 0.365837 | 5.1:+75846414 | MS.gene63883:CDS |
| GTTGTCTGAAGAGATTCTTT+TGG | 0.368169 | 5.1:+75846158 | MS.gene63883:CDS |
| GCATGATTAGAGGAAGGAAT+TGG | 0.374741 | 5.1:-75844724 | None:intergenic |
| TTGAAGTCAAAGACAGTTGC+AGG | 0.386479 | 5.1:+75845357 | MS.gene63883:CDS |
| AGAAGCAGAAGCATGATTAG+AGG | 0.407915 | 5.1:-75844734 | None:intergenic |
| TGATGATGAAGATGAAGAAA+TGG | 0.419929 | 5.1:+75844885 | MS.gene63883:CDS |
| GAATTTGTGGTTGCCTCAAA+AGG | 0.421558 | 5.1:-75846356 | None:intergenic |
| ATAGATTACTTGATGAGTCT+TGG | 0.425881 | 5.1:+75846306 | MS.gene63883:CDS |
| CTGCATTACAGTATTGATGA+TGG | 0.426933 | 5.1:+75846708 | MS.gene63883:CDS |
| ACCGTGTATTCTAGAATTTG+TGG | 0.436537 | 5.1:-75846369 | None:intergenic |
| AGATATTTAATTGAGGAAGT+TGG | 0.438021 | 5.1:+75846525 | MS.gene63883:CDS |
| AGAATGTTGAAAGGATTGTA+AGG | 0.447642 | 5.1:-75844700 | None:intergenic |
| GCAGGTGCTATCTCTGTCCT+TGG | 0.454121 | 5.1:+75846975 | MS.gene63883:intron |
| CAAAGAGAGCATTGTGAAGA+TGG | 0.456446 | 5.1:+75846665 | MS.gene63883:CDS |
| ACTAGAGATCCAAGAGGAAA+TGG | 0.462060 | 5.1:-75847156 | None:intergenic |
| TAGACAACAAGAAAAGGAAA+AGG | 0.464265 | 5.1:+75845649 | MS.gene63883:CDS |
| CCAAAAGGACCATTTCCTCT+TGG | 0.467379 | 5.1:+75847147 | MS.gene63883:CDS |
| TGACAAAAGGATTCATCAGT+TGG | 0.470816 | 5.1:-75847180 | None:intergenic |
| TTCGATGGAGAAAAGATATC+CGG | 0.473213 | 5.1:+75846134 | MS.gene63883:CDS |
| TATGACGAGGACGAATTCTC+TGG | 0.474277 | 5.1:-75847098 | None:intergenic |
| TCCAGCCCATCGTTGACAAA+AGG | 0.483266 | 5.1:-75847193 | None:intergenic |
| AATTGAGGAAGTTGGCATCA+AGG | 0.486070 | 5.1:+75846533 | MS.gene63883:CDS |
| TCAATTAAATATCTTACTGT+TGG | 0.487640 | 5.1:-75846516 | None:intergenic |
| GATGTTTCTTAACAAAGAGT+TGG | 0.488384 | 5.1:+75846635 | MS.gene63883:CDS |
| TACAGATAGACAACAAGAAA+AGG | 0.490910 | 5.1:+75845643 | MS.gene63883:intron |
| TTCCAAGAATAAATTTCCTA+AGG | 0.495242 | 5.1:+75846736 | MS.gene63883:CDS |
| AAAGCCGAAGTATTTGTACT+TGG | 0.508230 | 5.1:+75847008 | MS.gene63883:CDS |
| GCGTACCTAGTACCAAAATA+GGG | 0.510052 | 5.1:+75846436 | MS.gene63883:CDS |
| AACAGTAAGATATTTAATTG+AGG | 0.516231 | 5.1:+75846518 | MS.gene63883:CDS |
| TTGTGATTCCTTAATTCCAA+AGG | 0.518718 | 5.1:-75846217 | None:intergenic |
| ACCAATCGAAAATCACCCTA+TGG | 0.522397 | 5.1:+75844838 | MS.gene63883:CDS |
| TCTTTGGCATTAAGATCAGT+AGG | 0.525087 | 5.1:-75845327 | None:intergenic |
| AATAAATGTATGTTCTGCAC+AGG | 0.526298 | 5.1:+75846278 | MS.gene63883:CDS |
| CGGCTTTAGATTAGCTTCCA+AGG | 0.526666 | 5.1:-75846992 | None:intergenic |
| ATAAATTTCCTAAGGAGCAT+AGG | 0.526985 | 5.1:+75846744 | MS.gene63883:CDS |
| TTTACCAAGTACAAATACTT+CGG | 0.532246 | 5.1:-75847012 | None:intergenic |
| AAGACAAGCTAAGGTACATC+GGG | 0.535136 | 5.1:-75847071 | None:intergenic |
| GTAGTTTCGTAGAAATTCGA+TGG | 0.537172 | 5.1:+75846119 | MS.gene63883:intron |
| GTACATCGGGTATTTGGTCA+AGG | 0.541793 | 5.1:-75847058 | None:intergenic |
| GGAATTGGAAGAATGTTGAA+AGG | 0.542797 | 5.1:-75844709 | None:intergenic |
| TCCCTAAAGAAAGCTCCAAA+AGG | 0.551170 | 5.1:+75847132 | MS.gene63883:CDS |
| TCTGGTCCAAAGACAAGCTA+AGG | 0.551617 | 5.1:-75847080 | None:intergenic |
| AGACAACAAGAAAAGGAAAA+GGG | 0.551962 | 5.1:+75845650 | MS.gene63883:CDS |
| ATACGTTGGACAAGAATTTG+AGG | 0.570242 | 5.1:-75846588 | None:intergenic |
| ATGTATGTTCTGCACAGGAA+AGG | 0.582720 | 5.1:+75846283 | MS.gene63883:CDS |
| AGATTACTTGATGAGTCTTG+GGG | 0.589186 | 5.1:+75846308 | MS.gene63883:CDS |
| AAAGACAAGCTAAGGTACAT+CGG | 0.593674 | 5.1:-75847072 | None:intergenic |
| AGAATCTCTTCAGACAACTC+CGG | 0.598051 | 5.1:-75846153 | None:intergenic |
| GTGCTTAAGTAATCAAGAAG+TGG | 0.598694 | 5.1:-75846195 | None:intergenic |
| GCAGAAGCATGATTAGAGGA+AGG | 0.598929 | 5.1:-75844730 | None:intergenic |
| TCTTCATCATCAGAGTCATA+CGG | 0.598960 | 5.1:-75844874 | None:intergenic |
| CATCAGAGTCATACGGAGAG+AGG | 0.602302 | 5.1:-75844867 | None:intergenic |
| ATACTGTAATGCAGAAGCTG+AGG | 0.609678 | 5.1:-75846699 | None:intergenic |
| ACAAGAAAATAACAGTGCAA+AGG | 0.615006 | 5.1:+75845736 | MS.gene63883:CDS |
| TACTGTAATGCAGAAGCTGA+GGG | 0.620289 | 5.1:-75846698 | None:intergenic |
| TCCATGAAATGTCAATACGT+TGG | 0.626915 | 5.1:-75846602 | None:intergenic |
| GGTAAATGAGCTTCACAATG+AGG | 0.633064 | 5.1:+75847029 | MS.gene63883:CDS |
| GGTGTGAGATCTCTTAACAA+TGG | 0.634820 | 5.1:+75845671 | MS.gene63883:CDS |
| AATTCATCCAAATTTATGAG+AGG | 0.636805 | 5.1:+75846238 | MS.gene63883:CDS |
| GAATGTTGAAAGGATTGTAA+GGG | 0.639767 | 5.1:-75844699 | None:intergenic |
| AATCTTGACTAGCCTTACAC+AGG | 0.642412 | 5.1:+75846791 | MS.gene63883:CDS |
| ACCACAAATTCTAGAATACA+CGG | 0.657650 | 5.1:+75846368 | MS.gene63883:CDS |
| GTTGGAACTAGAGATCCAAG+AGG | 0.745944 | 5.1:-75847162 | None:intergenic |
| GAAACCAAGAACTTATGACG+AGG | 0.752928 | 5.1:-75847111 | None:intergenic |
| ACAAATTCTAGAATACACGG+TGG | 0.791192 | 5.1:+75846371 | MS.gene63883:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCTACTAAAATTAAAAAT+TGG | - | chr5.1:75845046-75845065 | None:intergenic | 10.0% |
| !! | AAAATACTAAAATTTCATCA+TGG | - | chr5.1:75844998-75845017 | None:intergenic | 15.0% |
| !! | ATATATTTGAATTGAAGTAA+TGG | + | chr5.1:75845126-75845145 | MS.gene63883:intron | 15.0% |
| !! | CATTGTAATTATATGTATTT+AGG | + | chr5.1:75846012-75846031 | MS.gene63883:intron | 15.0% |
| !! | TAGTAGTATATTATGTTATT+AGG | + | chr5.1:75845828-75845847 | MS.gene63883:intron | 15.0% |
| !! | TATATTTGAATTGAAGTAAT+GGG | + | chr5.1:75845127-75845146 | MS.gene63883:intron | 15.0% |
| !! | AACAGTAAGATATTTAATTG+AGG | + | chr5.1:75846518-75846537 | MS.gene63883:CDS | 20.0% |
| !! | CATAATATACTACTAATAAG+AGG | - | chr5.1:75845823-75845842 | None:intergenic | 20.0% |
| !! | TCAATTAAATATCTTACTGT+TGG | - | chr5.1:75846519-75846538 | None:intergenic | 20.0% |
| !!! | CTTGGTAGTTTTAATTTTAA+GGG | + | chr5.1:75845401-75845420 | MS.gene63883:intron | 20.0% |
| !!! | TTGGTAGTTTTAATTTTAAG+GGG | + | chr5.1:75845402-75845421 | MS.gene63883:intron | 20.0% |
| !!! | TTTAGTAGAAAATTTGAAGT+GGG | + | chr5.1:75845055-75845074 | MS.gene63883:intron | 20.0% |
| !!! | TTTTAGTAGAAAATTTGAAG+TGG | + | chr5.1:75845054-75845073 | MS.gene63883:intron | 20.0% |
| ! | AAACTCTCAAAATTCTTGAA+AGG | + | chr5.1:75845957-75845976 | MS.gene63883:intron | 25.0% |
| ! | AAAGCAATTATAAGATTCCA+TGG | - | chr5.1:75846085-75846104 | None:intergenic | 25.0% |
| ! | AACTCTCAAAATTCTTGAAA+GGG | + | chr5.1:75845958-75845977 | MS.gene63883:intron | 25.0% |
| ! | AATTCATCCAAATTTATGAG+AGG | + | chr5.1:75846238-75846257 | MS.gene63883:CDS | 25.0% |
| ! | AGATATTTAATTGAGGAAGT+TGG | + | chr5.1:75846525-75846544 | MS.gene63883:CDS | 25.0% |
| ! | CTTTATATTGTAGGTGTATT+TGG | + | chr5.1:75845451-75845470 | MS.gene63883:intron | 25.0% |
| ! | GTTTGAATTGGAGAAATAAA+TGG | + | chr5.1:75845207-75845226 | MS.gene63883:intron | 25.0% |
| ! | TTCCAAGAATAAATTTCCTA+AGG | + | chr5.1:75846736-75846755 | MS.gene63883:CDS | 25.0% |
| ! | TTTACCAAGTACAAATACTT+CGG | - | chr5.1:75847015-75847034 | None:intergenic | 25.0% |
| !! | ATAAAGTGTCTATGCTATAT+AGG | - | chr5.1:75845437-75845456 | None:intergenic | 25.0% |
| !! | ATATAAGAAGAATCCTTTTG+AGG | + | chr5.1:75846343-75846362 | MS.gene63883:CDS | 25.0% |
| !! | ATGTTTGAAAAAGTTTTGCT+TGG | + | chr5.1:75845383-75845402 | MS.gene63883:intron | 25.0% |
| !!! | GCTTGGTAGTTTTAATTTTA+AGG | + | chr5.1:75845400-75845419 | MS.gene63883:intron | 25.0% |
| !!! | TTTCAAGAATTTTGAGAGTT+TGG | - | chr5.1:75845958-75845977 | None:intergenic | 25.0% |
| AAGGAAACGATGTTATGTAA+TGG | + | chr5.1:75846872-75846891 | MS.gene63883:intron | 30.0% | |
| AATAAATGTATGTTCTGCAC+AGG | + | chr5.1:75846278-75846297 | MS.gene63883:CDS | 30.0% | |
| ACAAGAAAATAACAGTGCAA+AGG | + | chr5.1:75845736-75845755 | MS.gene63883:CDS | 30.0% | |
| ACTAATAAGAGGTCTAACAA+TGG | - | chr5.1:75845812-75845831 | None:intergenic | 30.0% | |
| AGAATGTTGAAAGGATTGTA+AGG | - | chr5.1:75844703-75844722 | None:intergenic | 30.0% | |
| AGACAACAAGAAAAGGAAAA+GGG | + | chr5.1:75845650-75845669 | MS.gene63883:CDS | 30.0% | |
| ATAGATTACTTGATGAGTCT+TGG | + | chr5.1:75846306-75846325 | MS.gene63883:CDS | 30.0% | |
| ATGCAAAAATAACCTGTGTA+AGG | - | chr5.1:75846806-75846825 | None:intergenic | 30.0% | |
| ATTGAACTTGTGTTGTATCT+AGG | + | chr5.1:75845290-75845309 | MS.gene63883:intron | 30.0% | |
| CGTTATAAGGATCAAACAAA+AGG | - | chr5.1:75846917-75846936 | None:intergenic | 30.0% | |
| CTCAACACTGTAAGAAAAAA+GGG | - | chr5.1:75846484-75846503 | None:intergenic | 30.0% | |
| CTCCTTAGGAAATTTATTCT+TGG | - | chr5.1:75846741-75846760 | None:intergenic | 30.0% | |
| GAATGTTGAAAGGATTGTAA+GGG | - | chr5.1:75844702-75844721 | None:intergenic | 30.0% | |
| GATGTTTCTTAACAAAGAGT+TGG | + | chr5.1:75846635-75846654 | MS.gene63883:CDS | 30.0% | |
| GCATAGACACTTTATATTGT+AGG | + | chr5.1:75845442-75845461 | MS.gene63883:intron | 30.0% | |
| TACAGATAGACAACAAGAAA+AGG | + | chr5.1:75845643-75845662 | MS.gene63883:intron | 30.0% | |
| TAGACAACAAGAAAAGGAAA+AGG | + | chr5.1:75845649-75845668 | MS.gene63883:CDS | 30.0% | |
| TAGATTACTTGATGAGTCTT+GGG | + | chr5.1:75846307-75846326 | MS.gene63883:CDS | 30.0% | |
| TCTCAACACTGTAAGAAAAA+AGG | - | chr5.1:75846485-75846504 | None:intergenic | 30.0% | |
| TTGTGAAGTTGTGTTTGAAT+TGG | + | chr5.1:75845195-75845214 | MS.gene63883:intron | 30.0% | |
| TTGTGATTCCTTAATTCCAA+AGG | - | chr5.1:75846220-75846239 | None:intergenic | 30.0% | |
| ! | AGATTCTTTTGGATGAGAAA+TGG | + | chr5.1:75846169-75846188 | MS.gene63883:CDS | 30.0% |
| ! | ATAAATTTCCTAAGGAGCAT+AGG | + | chr5.1:75846744-75846763 | MS.gene63883:CDS | 30.0% |
| ! | TGATGATGAAGATGAAGAAA+TGG | + | chr5.1:75844885-75844904 | MS.gene63883:CDS | 30.0% |
| ! | TTTGGGACTGAATATTGATT+GGG | + | chr5.1:75845927-75845946 | MS.gene63883:intron | 30.0% |
| !! | AACAGTGCAAAGGTATTAAA+TGG | + | chr5.1:75845746-75845765 | MS.gene63883:intron | 30.0% |
| !! | ACCACAAATTCTAGAATACA+CGG | + | chr5.1:75846368-75846387 | MS.gene63883:CDS | 30.0% |
| !! | AGCAATAATTTGCCCTATTT+TGG | - | chr5.1:75846451-75846470 | None:intergenic | 30.0% |
| !!! | CGATTGGTTTTGAGAATTTT+GGG | - | chr5.1:75844826-75844845 | None:intergenic | 30.0% |
| !!! | TCGATTGGTTTTGAGAATTT+TGG | - | chr5.1:75844827-75844846 | None:intergenic | 30.0% |
| !!! | TGCACTGTTATTTTCTTGTA+AGG | - | chr5.1:75845735-75845754 | None:intergenic | 30.0% |
| !!! | TTTTGGGACTGAATATTGAT+TGG | + | chr5.1:75845926-75845945 | MS.gene63883:intron | 30.0% |
| AAAGACAAGCTAAGGTACAT+CGG | - | chr5.1:75847075-75847094 | None:intergenic | 35.0% | |
| AACTTGTGTTGTATCTAGGA+CGG | + | chr5.1:75845294-75845313 | MS.gene63883:intron | 35.0% | |
| ACACTGTAAGAAAAAAGGGA+CGG | - | chr5.1:75846480-75846499 | None:intergenic | 35.0% | |
| ACATGTGCCTCTCATAAATT+TGG | - | chr5.1:75846248-75846267 | None:intergenic | 35.0% | |
| ACTAATTCACACACTGACAA+TGG | - | chr5.1:75845581-75845600 | None:intergenic | 35.0% | |
| AGATTACTTGATGAGTCTTG+GGG | + | chr5.1:75846308-75846327 | MS.gene63883:CDS | 35.0% | |
| ATACGTTGGACAAGAATTTG+AGG | - | chr5.1:75846591-75846610 | None:intergenic | 35.0% | |
| ATCTTCACAATGCTCTCTTT+GGG | - | chr5.1:75846666-75846685 | None:intergenic | 35.0% | |
| CTTGATTACTTAAGCACCTT+TGG | + | chr5.1:75846201-75846220 | MS.gene63883:CDS | 35.0% | |
| GAGCATAGGAATGAAAAATG+CGG | + | chr5.1:75846758-75846777 | MS.gene63883:CDS | 35.0% | |
| GGAATTGGAAGAATGTTGAA+AGG | - | chr5.1:75844712-75844731 | None:intergenic | 35.0% | |
| GGCATCAAGGAAAAAGATTT+GGG | + | chr5.1:75846546-75846565 | MS.gene63883:CDS | 35.0% | |
| GTAGTTTCGTAGAAATTCGA+TGG | + | chr5.1:75846119-75846138 | MS.gene63883:intron | 35.0% | |
| GTGCTTAAGTAATCAAGAAG+TGG | - | chr5.1:75846198-75846217 | None:intergenic | 35.0% | |
| TAACTGAGTGTCACGTTATA+AGG | - | chr5.1:75846930-75846949 | None:intergenic | 35.0% | |
| TATTGAATGCCCAAAAGTCA+GGG | + | chr5.1:75845895-75845914 | MS.gene63883:intron | 35.0% | |
| TCCATGAAATGTCAATACGT+TGG | - | chr5.1:75846605-75846624 | None:intergenic | 35.0% | |
| TCTTCATCATCAGAGTCATA+CGG | - | chr5.1:75844877-75844896 | None:intergenic | 35.0% | |
| TCTTTGGCATTAAGATCAGT+AGG | - | chr5.1:75845330-75845349 | None:intergenic | 35.0% | |
| TGACAAAAGGATTCATCAGT+TGG | - | chr5.1:75847183-75847202 | None:intergenic | 35.0% | |
| TGACTTCAATCTCTTGTCTT+TGG | - | chr5.1:75845346-75845365 | None:intergenic | 35.0% | |
| TGGCATCAAGGAAAAAGATT+TGG | + | chr5.1:75846545-75846564 | MS.gene63883:CDS | 35.0% | |
| TTATTCTCCCTTTGCACAAA+AGG | + | chr5.1:75846840-75846859 | MS.gene63883:intron | 35.0% | |
| TTATTGAATGCCCAAAAGTC+AGG | + | chr5.1:75845894-75845913 | MS.gene63883:intron | 35.0% | |
| TTCGATGGAGAAAAGATATC+CGG | + | chr5.1:75846134-75846153 | MS.gene63883:CDS | 35.0% | |
| ! | AAAGCCGAAGTATTTGTACT+TGG | + | chr5.1:75847008-75847027 | MS.gene63883:CDS | 35.0% |
| ! | AATAAAATGCCCCTGACTTT+TGG | - | chr5.1:75845908-75845927 | None:intergenic | 35.0% |
| ! | ACTCACGTTGCTTTCTTAAT+GGG | + | chr5.1:75846408-75846427 | MS.gene63883:CDS | 35.0% |
| ! | ATAAAATGCCCCTGACTTTT+GGG | - | chr5.1:75845907-75845926 | None:intergenic | 35.0% |
| ! | ATGAATCCTTTTGTCAACGA+TGG | + | chr5.1:75847187-75847206 | MS.gene63883:CDS | 35.0% |
| ! | GATGCTATTCTCTGACTTTT+GGG | - | chr5.1:75845713-75845732 | None:intergenic | 35.0% |
| ! | GTTGTCTGAAGAGATTCTTT+TGG | + | chr5.1:75846158-75846177 | MS.gene63883:CDS | 35.0% |
| ! | TCCAACGTATTGACATTTCA+TGG | + | chr5.1:75846601-75846620 | MS.gene63883:CDS | 35.0% |
| ! | TGAATCCTTTTGTCAACGAT+GGG | + | chr5.1:75847188-75847207 | MS.gene63883:CDS | 35.0% |
| ! | TTTTCATTCCTATGCTCCTT+AGG | - | chr5.1:75846755-75846774 | None:intergenic | 35.0% |
| !! | ACAAATTCTAGAATACACGG+TGG | + | chr5.1:75846371-75846390 | MS.gene63883:CDS | 35.0% |
| !! | ACCGTGTATTCTAGAATTTG+TGG | - | chr5.1:75846372-75846391 | None:intergenic | 35.0% |
| !! | CTGCATTACAGTATTGATGA+TGG | + | chr5.1:75846708-75846727 | MS.gene63883:CDS | 35.0% |
| !! | CTTAAGCACCTTTGGAATTA+AGG | + | chr5.1:75846209-75846228 | MS.gene63883:CDS | 35.0% |
| !!! | AAGTCAGGGGCATTTTATTT+TGG | + | chr5.1:75845909-75845928 | MS.gene63883:intron | 35.0% |
| !!! | AGTCAGGGGCATTTTATTTT+GGG | + | chr5.1:75845910-75845929 | MS.gene63883:intron | 35.0% |
| !!! | ATTTGCCCTATTTTGGTACT+AGG | - | chr5.1:75846444-75846463 | None:intergenic | 35.0% |
| !!! | GGTTTTGAGAATTTTGGGAT+TGG | - | chr5.1:75844821-75844840 | None:intergenic | 35.0% |
| !!! | TCCTTTTGGAGCTTTCTTTA+GGG | - | chr5.1:75847136-75847155 | None:intergenic | 35.0% |
| AAGACAAGCTAAGGTACATC+GGG | - | chr5.1:75847074-75847093 | None:intergenic | 40.0% | |
| AATTGAGGAAGTTGGCATCA+AGG | + | chr5.1:75846533-75846552 | MS.gene63883:CDS | 40.0% | |
| ACCAATCGAAAATCACCCTA+TGG | + | chr5.1:75844838-75844857 | MS.gene63883:CDS | 40.0% | |
| ACTAGAGATCCAAGAGGAAA+TGG | - | chr5.1:75847159-75847178 | None:intergenic | 40.0% | |
| AGAATCTCTTCAGACAACTC+CGG | - | chr5.1:75846156-75846175 | None:intergenic | 40.0% | |
| ATACTGTAATGCAGAAGCTG+AGG | - | chr5.1:75846702-75846721 | None:intergenic | 40.0% | |
| ATGTATGTTCTGCACAGGAA+AGG | + | chr5.1:75846283-75846302 | MS.gene63883:CDS | 40.0% | |
| ATTGAATGCCCAAAAGTCAG+GGG | + | chr5.1:75845896-75845915 | MS.gene63883:intron | 40.0% | |
| CATCTTCACAATGCTCTCTT+TGG | - | chr5.1:75846667-75846686 | None:intergenic | 40.0% | |
| GAAACCAAGAACTTATGACG+AGG | - | chr5.1:75847114-75847133 | None:intergenic | 40.0% | |
| GAATTTGTGGTTGCCTCAAA+AGG | - | chr5.1:75846359-75846378 | None:intergenic | 40.0% | |
| GCACAAAAGGAACAAGGAAA+AGG | + | chr5.1:75846853-75846872 | MS.gene63883:intron | 40.0% | |
| GCATGATTAGAGGAAGGAAT+TGG | - | chr5.1:75844727-75844746 | None:intergenic | 40.0% | |
| GCGTACCTAGTACCAAAATA+GGG | + | chr5.1:75846436-75846455 | MS.gene63883:CDS | 40.0% | |
| GCTGCAGTTATTGTGTGATT+AGG | + | chr5.1:75845850-75845869 | MS.gene63883:intron | 40.0% | |
| GGTAAATGAGCTTCACAATG+AGG | + | chr5.1:75847029-75847048 | MS.gene63883:CDS | 40.0% | |
| GGTGTGAGATCTCTTAACAA+TGG | + | chr5.1:75845671-75845690 | MS.gene63883:CDS | 40.0% | |
| TACTGTAATGCAGAAGCTGA+GGG | - | chr5.1:75846701-75846720 | None:intergenic | 40.0% | |
| TCCCTAAAGAAAGCTCCAAA+AGG | + | chr5.1:75847132-75847151 | MS.gene63883:CDS | 40.0% | |
| TGTCAGACACTAACACGTTA+TGG | - | chr5.1:75845480-75845499 | None:intergenic | 40.0% | |
| TTATTGTGTGATTAGGCAGC+AGG | + | chr5.1:75845857-75845876 | MS.gene63883:intron | 40.0% | |
| TTGAAGTCAAAGACAGTTGC+AGG | + | chr5.1:75845357-75845376 | MS.gene63883:CDS | 40.0% | |
| TTGAATGTAACCACACGAGT+CGG | - | chr5.1:75845508-75845527 | None:intergenic | 40.0% | |
| ! | AGAAGCAGAAGCATGATTAG+AGG | - | chr5.1:75844737-75844756 | None:intergenic | 40.0% |
| ! | CCTTGTTCCTTTTGTGCAAA+GGG | - | chr5.1:75846850-75846869 | None:intergenic | 40.0% |
| ! | GACTCACGTTGCTTTCTTAA+TGG | + | chr5.1:75846407-75846426 | MS.gene63883:CDS | 40.0% |
| ! | GGAGAGAGGAATTTTCCATA+GGG | - | chr5.1:75844856-75844875 | None:intergenic | 40.0% |
| ! | GGATGCTATTCTCTGACTTT+TGG | - | chr5.1:75845714-75845733 | None:intergenic | 40.0% |
| ! | TCCATAGGGTGATTTTCGAT+TGG | - | chr5.1:75844842-75844861 | None:intergenic | 40.0% |
| ! | TCCTTGTTCCTTTTGTGCAA+AGG | - | chr5.1:75846851-75846870 | None:intergenic | 40.0% |
| !! | AATCTTGACTAGCCTTACAC+AGG | + | chr5.1:75846791-75846810 | MS.gene63883:CDS | 40.0% |
| !! | CAAAGAGAGCATTGTGAAGA+TGG | + | chr5.1:75846665-75846684 | MS.gene63883:CDS | 40.0% |
| !! | GATGTACCTTAGCTTGTCTT+TGG | + | chr5.1:75847074-75847093 | MS.gene63883:CDS | 40.0% |
| !! | GTTGCTTTCTTAATGGGCTT+GGG | + | chr5.1:75846414-75846433 | MS.gene63883:CDS | 40.0% |
| !!! | ACCCACAACTCGAGTTTTTT+GGG | + | chr5.1:75845985-75846004 | MS.gene63883:intron | 40.0% |
| !!! | GTCCTTTTGGAGCTTTCTTT+AGG | - | chr5.1:75847137-75847156 | None:intergenic | 40.0% |
| ATAAGATTCCATGGCACCAC+AGG | - | chr5.1:75846076-75846095 | None:intergenic | 45.0% | |
| CCAAAAGGACCATTTCCTCT+TGG | + | chr5.1:75847147-75847166 | MS.gene63883:CDS | 45.0% | |
| CCCTTTGCACAAAAGGAACA+AGG | + | chr5.1:75846847-75846866 | MS.gene63883:intron | 45.0% | |
| GCAGCCAATTAATGTACCTG+TGG | + | chr5.1:75846057-75846076 | MS.gene63883:intron | 45.0% | |
| GCTAAGGTACATCGGGTATT+TGG | - | chr5.1:75847067-75847086 | None:intergenic | 45.0% | |
| GGCACCACAGGTACATTAAT+TGG | - | chr5.1:75846064-75846083 | None:intergenic | 45.0% | |
| GGCGTACCTAGTACCAAAAT+AGG | + | chr5.1:75846435-75846454 | MS.gene63883:CDS | 45.0% | |
| GTACATCGGGTATTTGGTCA+AGG | - | chr5.1:75847061-75847080 | None:intergenic | 45.0% | |
| GTTGGAACTAGAGATCCAAG+AGG | - | chr5.1:75847165-75847184 | None:intergenic | 45.0% | |
| TATGACGAGGACGAATTCTC+TGG | - | chr5.1:75847101-75847120 | None:intergenic | 45.0% | |
| TCGTCCTCGTCATAAGTTCT+TGG | + | chr5.1:75847107-75847126 | MS.gene63883:CDS | 45.0% | |
| TCTGGTCCAAAGACAAGCTA+AGG | - | chr5.1:75847083-75847102 | None:intergenic | 45.0% | |
| ! | CCAAGAGGAAATGGTCCTTT+TGG | - | chr5.1:75847150-75847169 | None:intergenic | 45.0% |
| ! | CCCCAAAAAACTCGAGTTGT+GGG | - | chr5.1:75845989-75846008 | None:intergenic | 45.0% |
| ! | CGGAGAGAGGAATTTTCCAT+AGG | - | chr5.1:75844857-75844876 | None:intergenic | 45.0% |
| ! | GCAGAAGCATGATTAGAGGA+AGG | - | chr5.1:75844733-75844752 | None:intergenic | 45.0% |
| ! | TCCCCAAAAAACTCGAGTTG+TGG | - | chr5.1:75845990-75846009 | None:intergenic | 45.0% |
| ! | TTAATGTACCTGTGGTGCCA+TGG | + | chr5.1:75846065-75846084 | MS.gene63883:intron | 45.0% |
| !! | CGGCTTTAGATTAGCTTCCA+AGG | - | chr5.1:75846995-75847014 | None:intergenic | 45.0% |
| !! | CGTTGCTTTCTTAATGGGCT+TGG | + | chr5.1:75846413-75846432 | MS.gene63883:CDS | 45.0% |
| !!! | CCCACAACTCGAGTTTTTTG+GGG | + | chr5.1:75845986-75846005 | MS.gene63883:intron | 45.0% |
| !!! | GACCCACAACTCGAGTTTTT+TGG | + | chr5.1:75845984-75846003 | MS.gene63883:intron | 45.0% |
| CATCAGAGTCATACGGAGAG+AGG | - | chr5.1:75844870-75844889 | None:intergenic | 50.0% | |
| CTGCAGGCACAGTAGTCAAT+AGG | - | chr5.1:75846959-75846978 | None:intergenic | 50.0% | |
| TCCAGCCCATCGTTGACAAA+AGG | - | chr5.1:75847196-75847215 | None:intergenic | 50.0% | |
| ! | CTATTGACTACTGTGCCTGC+AGG | + | chr5.1:75846957-75846976 | MS.gene63883:intron | 50.0% |
| ! | TCCTTTTGTCAACGATGGGC+TGG | + | chr5.1:75847192-75847211 | MS.gene63883:CDS | 50.0% |
| AGGACAGAGATAGCACCTGC+AGG | - | chr5.1:75846975-75846994 | None:intergenic | 55.0% | |
| ! | GCAGGTGCTATCTCTGTCCT+TGG | + | chr5.1:75846975-75846994 | MS.gene63883:intron | 55.0% |
| !! | TGACACAACACCGACTCGTG+TGG | + | chr5.1:75845495-75845514 | MS.gene63883:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 75844673 | 75847296 | 75844673 | ID=MS.gene63883 |
| chr5.1 | mRNA | 75844673 | 75847296 | 75844673 | ID=MS.gene63883.t1;Parent=MS.gene63883 |
| chr5.1 | exon | 75844673 | 75844981 | 75844673 | ID=MS.gene63883.t1.exon1;Parent=MS.gene63883.t1 |
| chr5.1 | CDS | 75844673 | 75844981 | 75844673 | ID=cds.MS.gene63883.t1;Parent=MS.gene63883.t1 |
| chr5.1 | exon | 75845312 | 75845378 | 75845312 | ID=MS.gene63883.t1.exon2;Parent=MS.gene63883.t1 |
| chr5.1 | CDS | 75845312 | 75845378 | 75845312 | ID=cds.MS.gene63883.t1;Parent=MS.gene63883.t1 |
| chr5.1 | exon | 75845648 | 75845757 | 75845648 | ID=MS.gene63883.t1.exon3;Parent=MS.gene63883.t1 |
| chr5.1 | CDS | 75845648 | 75845757 | 75845648 | ID=cds.MS.gene63883.t1;Parent=MS.gene63883.t1 |
| chr5.1 | exon | 75846123 | 75846812 | 75846123 | ID=MS.gene63883.t1.exon4;Parent=MS.gene63883.t1 |
| chr5.1 | CDS | 75846123 | 75846812 | 75846123 | ID=cds.MS.gene63883.t1;Parent=MS.gene63883.t1 |
| chr5.1 | exon | 75846979 | 75847296 | 75846979 | ID=MS.gene63883.t1.exon5;Parent=MS.gene63883.t1 |
| chr5.1 | CDS | 75846979 | 75847296 | 75846979 | ID=cds.MS.gene63883.t1;Parent=MS.gene63883.t1 |
| Gene Sequence |
| Protein sequence |