Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64070.t1 | XP_003615152.1 | 99.3 | 447 | 3 | 0 | 1 | 447 | 86 | 532 | 1.90E-260 | 907.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64070.t1 | P27608 | 92.5 | 439 | 33 | 0 | 1 | 439 | 99 | 537 | 5.1e-243 | 841.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64070.t1 | G7KAF6 | 99.3 | 447 | 3 | 0 | 1 | 447 | 86 | 532 | 1.3e-260 | 907.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene64070 | -0.808272 | 3.36E-50 | -1.69E-46 |
| MS.gene049634 | MS.gene64070 | 0.818641 | 1.76E-52 | -1.69E-46 |
| MS.gene050083 | MS.gene64070 | 0.985024 | 2.69E-162 | -1.69E-46 |
| MS.gene050381 | MS.gene64070 | 0.810298 | 1.24E-50 | -1.69E-46 |
| MS.gene05079 | MS.gene64070 | 0.805249 | 1.46E-49 | -1.69E-46 |
| MS.gene050809 | MS.gene64070 | 0.837554 | 4.85E-57 | -1.69E-46 |
| MS.gene05080 | MS.gene64070 | -0.811248 | 7.70E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene64070 | -0.810754 | 9.85E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene64070 | -0.81084 | 9.44E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene64070 | -0.801152 | 1.03E-48 | -1.69E-46 |
| MS.gene053916 | MS.gene64070 | -0.80924 | 2.09E-50 | -1.69E-46 |
| MS.gene054290 | MS.gene64070 | 0.820906 | 5.35E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene64070 | -0.808089 | 3.68E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene64070 | -0.822025 | 2.95E-53 | -1.69E-46 |
| MS.gene058323 | MS.gene64070 | -0.811117 | 8.22E-51 | -1.69E-46 |
| MS.gene058603 | MS.gene64070 | 0.810147 | 1.33E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene64070 | -0.810889 | 9.21E-51 | -1.69E-46 |
| MS.gene058840 | MS.gene64070 | 0.810058 | 1.39E-50 | -1.69E-46 |
| MS.gene059691 | MS.gene64070 | 0.803315 | 3.70E-49 | -1.69E-46 |
| MS.gene059944 | MS.gene64070 | 0.809856 | 1.54E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene64070 | -0.812274 | 4.60E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64070.t1 | MTR_5g064500 | 99.329 | 447 | 3 | 0 | 1 | 447 | 86 | 532 | 0.0 | 935 |
| MS.gene64070.t1 | MTR_2g009080 | 86.036 | 444 | 62 | 0 | 1 | 444 | 63 | 506 | 0.0 | 820 |
| MS.gene64070.t1 | MTR_5g064500 | 99.164 | 359 | 3 | 0 | 1 | 359 | 86 | 444 | 0.0 | 752 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64070.t1 | AT1G22410 | 90.433 | 439 | 42 | 0 | 1 | 439 | 84 | 522 | 0.0 | 845 |
| MS.gene64070.t1 | AT4G39980 | 86.105 | 439 | 61 | 0 | 1 | 439 | 84 | 522 | 0.0 | 813 |
| MS.gene64070.t1 | AT4G33510 | 86.530 | 438 | 59 | 0 | 1 | 438 | 61 | 498 | 0.0 | 811 |
| MS.gene64070.t1 | AT4G33510 | 85.714 | 280 | 40 | 0 | 1 | 280 | 61 | 340 | 0.0 | 521 |
Find 123 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCAGTTGTTCTCATTAT+TGG | 0.134462 | 5.4:-50253546 | None:intergenic |
| GAGACCACATGGAGCCTTTA+TGG | 0.184574 | 5.4:-50254082 | None:intergenic |
| ATAATATTCGTGATACTTTC+AGG | 0.200922 | 5.4:+50251738 | MS.gene64070:CDS |
| TAATGAGAACAACTGATTTC+TGG | 0.220444 | 5.4:+50253550 | MS.gene64070:CDS |
| TCTTCCTGATTCGGGTATTC+AGG | 0.267996 | 5.4:-50251557 | None:intergenic |
| TGATTGTGCTGAGAGCTTTA+AGG | 0.274674 | 5.4:+50251703 | MS.gene64070:CDS |
| TGGTCAAATGCCGGTTATTA+AGG | 0.287437 | 5.4:+50251796 | MS.gene64070:CDS |
| TAGAACTTTGGAGGAGCATT+TGG | 0.303044 | 5.4:+50251640 | MS.gene64070:CDS |
| TCCTCAAAATTATCTGATCT+TGG | 0.314286 | 5.4:-50252190 | None:intergenic |
| ATGAGTTTAACAAGCTCATT+TGG | 0.319944 | 5.4:-50253904 | None:intergenic |
| ACTGCTCGGCCCATATGATT+TGG | 0.332701 | 5.4:+50253649 | MS.gene64070:CDS |
| TTCCCACCGATTGTGTTTGC+TGG | 0.344055 | 5.4:+50251611 | MS.gene64070:CDS |
| TGAAGCTTCCACATCTAATC+AGG | 0.349284 | 5.4:+50254001 | MS.gene64070:CDS |
| ATGAGTGTTGTTATGATGTT+TGG | 0.350568 | 5.4:+50251773 | MS.gene64070:CDS |
| ACTAGGTTGGATTCAACTTC+TGG | 0.353531 | 5.4:+50253615 | MS.gene64070:CDS |
| TGACGAGGCCCTTGGATTCA+TGG | 0.361274 | 5.4:+50253497 | MS.gene64070:CDS |
| GATTCAAGGTCTTCCTGATT+CGG | 0.382092 | 5.4:-50251566 | None:intergenic |
| ATCTCGAGATGAACTCCTCC+TGG | 0.383136 | 5.4:-50255041 | None:intergenic |
| CTTGGATTCATGGCTGCTGC+TGG | 0.388264 | 5.4:+50253507 | MS.gene64070:CDS |
| CTCGCCCCTTCGATGCCATC+AGG | 0.398912 | 5.4:+50254109 | MS.gene64070:CDS |
| ATTCAAGGTCTTCCTGATTC+GGG | 0.401205 | 5.4:-50251565 | None:intergenic |
| CTGCTCGGCCCATATGATTT+GGG | 0.405345 | 5.4:+50253650 | MS.gene64070:CDS |
| TGCTGGTGAAGCTAGAACTT+TGG | 0.406539 | 5.4:+50251628 | MS.gene64070:CDS |
| TGCTAATCCCTTGGGAATCA+AGG | 0.411682 | 5.4:+50253728 | MS.gene64070:CDS |
| TTTCACCGACCCAAATCATA+TGG | 0.414155 | 5.4:-50253659 | None:intergenic |
| ACTTCCTGAATACCCGAATC+AGG | 0.417101 | 5.4:+50251553 | MS.gene64070:CDS |
| CAGCCTCCTCTTGAATCTAC+TGG | 0.419266 | 5.4:+50255230 | MS.gene64070:CDS |
| CCTCTGAGGATCCGGTGTCC+TGG | 0.425550 | 5.4:-50252281 | None:intergenic |
| GAATGGGAGCTGAAAATATG+AGG | 0.428665 | 5.4:+50253977 | MS.gene64070:CDS |
| AGAACTTTGGAGGAGCATTT+GGG | 0.432167 | 5.4:+50251641 | MS.gene64070:CDS |
| GGAAACGCGTTTCTTCTTCA+AGG | 0.435848 | 5.4:+50251677 | MS.gene64070:CDS |
| GAAAGGACCCGGCAGCTAGA+TGG | 0.442378 | 5.4:+50253678 | MS.gene64070:CDS |
| CGAATCATCCTCTGAGGATC+CGG | 0.446078 | 5.4:-50252289 | None:intergenic |
| GCATTTGGGTGAAGCTGCTA+TGG | 0.448723 | 5.4:+50251655 | MS.gene64070:CDS |
| GTGTAGGTGGGGAGAATGGC+GGG | 0.452534 | 5.4:+50252154 | MS.gene64070:intron |
| TATGCATGGAAACACCATAA+AGG | 0.458987 | 5.4:+50254068 | MS.gene64070:CDS |
| GTGATCACAGTTATTCTCCC+TGG | 0.464414 | 5.4:-50253952 | None:intergenic |
| AATAACTGTGATCACTAGAA+TGG | 0.468302 | 5.4:+50253960 | MS.gene64070:CDS |
| AAGAGGAGTTGCTAATCCCT+TGG | 0.471432 | 5.4:+50253719 | MS.gene64070:CDS |
| GTGTCTTCAGAACCGATTCA+AGG | 0.475152 | 5.4:-50251580 | None:intergenic |
| AACCGAGTTGACGAGGCCCT+TGG | 0.475450 | 5.4:+50253489 | MS.gene64070:CDS |
| GAGGGTTACTCAATGGAACT+TGG | 0.475465 | 5.4:+50252384 | MS.gene64070:CDS |
| CATGGGCACCATCTAGCTGC+CGG | 0.479264 | 5.4:-50253686 | None:intergenic |
| ATCAGGGCAGTGCGTAGAGC+AGG | 0.486709 | 5.4:+50254018 | MS.gene64070:CDS |
| AGTGTTGTTATGATGTTTGG+TGG | 0.495904 | 5.4:+50251776 | MS.gene64070:CDS |
| GTATGTGTAGGTGGGGAGAA+TGG | 0.499019 | 5.4:+50252150 | MS.gene64070:intron |
| ATGTTATCCCCTCTGTAACT+AGG | 0.500156 | 5.4:-50252232 | None:intergenic |
| CTAGTCAGTGATTGTTCGTA+TGG | 0.504178 | 5.4:-50253597 | None:intergenic |
| AGAGGAGTTGCTAATCCCTT+GGG | 0.505158 | 5.4:+50253720 | MS.gene64070:CDS |
| ATAACTGTGATCACTAGAAT+GGG | 0.510424 | 5.4:+50253961 | MS.gene64070:CDS |
| TGGTGAAGCTAGAACTTTGG+AGG | 0.510903 | 5.4:+50251631 | MS.gene64070:CDS |
| AACAAAGTGAGCAAGGAGAT+AGG | 0.513379 | 5.4:+50252416 | MS.gene64070:CDS |
| CAGCAGCAGCCATGAATCCA+AGG | 0.514701 | 5.4:-50253506 | None:intergenic |
| GCTTCACCAGCAAACACAAT+CGG | 0.517024 | 5.4:-50251617 | None:intergenic |
| ATATGATTTGGGTCGGTGAA+AGG | 0.524061 | 5.4:+50253661 | MS.gene64070:CDS |
| CTATGCAGAGGGTTACTCAA+TGG | 0.527213 | 5.4:+50252377 | MS.gene64070:CDS |
| CGAACAATCACTGACTAGGT+TGG | 0.528366 | 5.4:+50253602 | MS.gene64070:CDS |
| ATGCATTTGATGAGAAATCC+AGG | 0.533532 | 5.4:+50252263 | MS.gene64070:CDS |
| CAGTTGTTCTCATTATTGGA+TGG | 0.535636 | 5.4:-50253542 | None:intergenic |
| GATTGTGAAGCATTAAGTCT+AGG | 0.540354 | 5.4:-50255152 | None:intergenic |
| ACATACCCTGATGGCATCGA+AGG | 0.544063 | 5.4:-50254115 | None:intergenic |
| ATGGGCACCATCTAGCTGCC+GGG | 0.546243 | 5.4:-50253685 | None:intergenic |
| GATGTTTGGTGGTCAAATGC+CGG | 0.554132 | 5.4:+50251787 | MS.gene64070:CDS |
| GGAGTTCATCTCGAGATGAC+AGG | 0.554494 | 5.4:+50255047 | MS.gene64070:CDS |
| TGGTCTCTACTATGACTGCT+CGG | 0.558656 | 5.4:+50253635 | MS.gene64070:CDS |
| CTTTGACCCACCAATGCACT+CGG | 0.560562 | 5.4:-50255081 | None:intergenic |
| TGTGTAGGTGGGGAGAATGG+CGG | 0.564279 | 5.4:+50252153 | MS.gene64070:intron |
| ATCCAAGGGCCTCGTCAACT+CGG | 0.564332 | 5.4:-50253491 | None:intergenic |
| TTGCTTTCATCATTGCTGAA+AGG | 0.565069 | 5.4:+50255183 | MS.gene64070:CDS |
| GCCCATGTGGAATTTCTAAG+AGG | 0.566044 | 5.4:+50253702 | MS.gene64070:CDS |
| TTGGCAGGTAAGTGACAAGA+TGG | 0.566076 | 5.4:+50253879 | MS.gene64070:intron |
| GTGAAGCTTCCTAGTTACAG+AGG | 0.567289 | 5.4:+50252223 | MS.gene64070:CDS |
| TTTATGGTGTTTCCATGCAT+AGG | 0.567351 | 5.4:-50254066 | None:intergenic |
| TTTGATGTTCACGAACAAGA+AGG | 0.569277 | 5.4:+50255011 | MS.gene64070:CDS |
| CTCCTCTTAGAAATTCCACA+TGG | 0.569920 | 5.4:-50253704 | None:intergenic |
| CATACGAACAATCACTGACT+AGG | 0.572547 | 5.4:+50253598 | MS.gene64070:CDS |
| GTCTAGGATCGCAGTGTGTG+TGG | 0.573843 | 5.4:-50255136 | None:intergenic |
| TTCACCGACCCAAATCATAT+GGG | 0.576952 | 5.4:-50253658 | None:intergenic |
| CGCACTGCCCTGATTAGATG+TGG | 0.581273 | 5.4:-50254009 | None:intergenic |
| GAACAAGAAGGAAGCCACCC+AGG | 0.583974 | 5.4:+50255023 | MS.gene64070:CDS |
| TTCACTGAACAAAGTGAGCA+AGG | 0.586199 | 5.4:+50252409 | MS.gene64070:CDS |
| GAATCAGGAAGACCTTGAAT+CGG | 0.587258 | 5.4:+50251568 | MS.gene64070:CDS |
| TTTGGGTCGGTGAAAGGACC+CGG | 0.587829 | 5.4:+50253667 | MS.gene64070:CDS |
| GTGGTTATGCTGCTATGCAG+AGG | 0.589556 | 5.4:+50252365 | MS.gene64070:CDS |
| CATTTGGGTGAAGCTGCTAT+GGG | 0.590193 | 5.4:+50251656 | MS.gene64070:CDS |
| GTACAAACCTTGATTCCCAA+GGG | 0.590839 | 5.4:-50253735 | None:intergenic |
| TTGAATCCTCAAAACAAACC+AGG | 0.591600 | 5.4:+50253934 | MS.gene64070:CDS |
| TCTCGAGATGAACTCCTCCT+GGG | 0.600054 | 5.4:-50255040 | None:intergenic |
| AGCAGCAGCCATGAATCCAA+GGG | 0.602803 | 5.4:-50253505 | None:intergenic |
| AATGTGACCGAGTGCATTGG+TGG | 0.602808 | 5.4:+50255074 | MS.gene64070:CDS |
| TGTACAAACCTTGATTCCCA+AGG | 0.603751 | 5.4:-50253736 | None:intergenic |
| CATACCCTGATGGCATCGAA+GGG | 0.606030 | 5.4:-50254114 | None:intergenic |
| TGGGTCAGCGATCCTATGCA+TGG | 0.606343 | 5.4:+50254054 | MS.gene64070:CDS |
| TGAAGCTTCCTAGTTACAGA+GGG | 0.612272 | 5.4:+50252224 | MS.gene64070:CDS |
| CACCAGCAAACACAATCGGT+GGG | 0.618762 | 5.4:-50251613 | None:intergenic |
| TCACCAGCAAACACAATCGG+TGG | 0.619065 | 5.4:-50251614 | None:intergenic |
| GAGCAGGACAAATTGTCACA+TGG | 0.619461 | 5.4:+50254034 | MS.gene64070:CDS |
| TGGTTATGCTGCTATGCAGA+GGG | 0.620511 | 5.4:+50252366 | MS.gene64070:CDS |
| CAAAATCCAGTAGATTCAAG+AGG | 0.624319 | 5.4:-50255236 | None:intergenic |
| TCGGCCCATATGATTTGGGT+CGG | 0.625917 | 5.4:+50253654 | MS.gene64070:CDS |
| CAAAATGTGACCGAGTGCAT+TGG | 0.625971 | 5.4:+50255071 | MS.gene64070:CDS |
| TGAATCCTCAAAACAAACCA+GGG | 0.631348 | 5.4:+50253935 | MS.gene64070:CDS |
| ATGAGAATTACATACCCTGA+TGG | 0.631649 | 5.4:-50254124 | None:intergenic |
| AGCAGGACAAATTGTCACAT+GGG | 0.633535 | 5.4:+50254035 | MS.gene64070:CDS |
| AATCCAGTAGATTCAAGAGG+AGG | 0.634268 | 5.4:-50255233 | None:intergenic |
| GCAGCTAGATGGTGCCCATG+TGG | 0.634651 | 5.4:+50253689 | MS.gene64070:CDS |
| AACGCGTTTCTTCTTCAAGG+TGG | 0.636605 | 5.4:+50251680 | MS.gene64070:CDS |
| GCTTGCTAACCGAGTTGACG+AGG | 0.637217 | 5.4:+50253482 | MS.gene64070:CDS |
| TCGCCCCTTCGATGCCATCA+GGG | 0.638610 | 5.4:+50254110 | MS.gene64070:CDS |
| AATGGGAGCTGAAAATATGA+GGG | 0.641776 | 5.4:+50253978 | MS.gene64070:CDS |
| GAAGCTTCCACATCTAATCA+GGG | 0.649089 | 5.4:+50254002 | MS.gene64070:CDS |
| CGAGATGAACTCCTCCTGGG+TGG | 0.649169 | 5.4:-50255037 | None:intergenic |
| CCAGGACACCGGATCCTCAG+AGG | 0.650897 | 5.4:+50252281 | MS.gene64070:CDS |
| TGATGAGAAATCCAGGACAC+CGG | 0.656139 | 5.4:+50252270 | MS.gene64070:CDS |
| TACAGAGGGGATAACATCAA+CGG | 0.665031 | 5.4:+50252238 | MS.gene64070:CDS |
| CAAGAAGGAAGCCACCCAGG+AGG | 0.672096 | 5.4:+50255026 | MS.gene64070:CDS |
| TCCTCTTAGAAATTCCACAT+GGG | 0.686989 | 5.4:-50253703 | None:intergenic |
| ATACCCTGATGGCATCGAAG+GGG | 0.693071 | 5.4:-50254113 | None:intergenic |
| CAACTCGGTTAGCAAGCTCA+CGG | 0.698471 | 5.4:-50253476 | None:intergenic |
| TAAGCACGAATCATCCTCTG+AGG | 0.708055 | 5.4:-50252295 | None:intergenic |
| ATGTGACCGAGTGCATTGGT+GGG | 0.709519 | 5.4:+50255075 | MS.gene64070:CDS |
| AACACCATAAAGGCTCCATG+TGG | 0.710721 | 5.4:+50254078 | MS.gene64070:CDS |
| GAAGCTTCCTAGTTACAGAG+GGG | 0.779581 | 5.4:+50252225 | MS.gene64070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGAAAGATTAAAAATA+AGG | + | chr5.4:50253107-50253126 | MS.gene64070:intron | 10.0% |
| !! | AAGATAATAATTTAAAAAAG+AGG | + | chr5.4:50253147-50253166 | MS.gene64070:intron | 10.0% |
| !! | TTCTACTTAAAATTAAAATA+AGG | + | chr5.4:50254308-50254327 | MS.gene64070:intron | 10.0% |
| !!! | TATATATAAAATTTTGAGTT+TGG | + | chr5.4:50254432-50254451 | MS.gene64070:intron | 10.0% |
| !!! | TTCTTAATTTTTTTTTTTCA+AGG | + | chr5.4:50252465-50252484 | MS.gene64070:intron | 10.0% |
| !!! | TTTTTTAAGTGAATTTTTTT+TGG | + | chr5.4:50252876-50252895 | MS.gene64070:intron | 10.0% |
| !! | AAATCACAAAAATCAAATAT+TGG | - | chr5.4:50254924-50254943 | None:intergenic | 15.0% |
| !! | AATAAAAATTCACACTAATA+TGG | - | chr5.4:50254852-50254871 | None:intergenic | 15.0% |
| !! | AATCACAAAAATCAAATATT+GGG | - | chr5.4:50254923-50254942 | None:intergenic | 15.0% |
| !! | ATAAACTAAAAAATATACCA+AGG | - | chr5.4:50252521-50252540 | None:intergenic | 15.0% |
| !! | TAAATATGTTATTATGATTC+TGG | + | chr5.4:50251912-50251931 | MS.gene64070:intron | 15.0% |
| !!! | CTATGTAAATATTTATCTTT+TGG | + | chr5.4:50253073-50253092 | MS.gene64070:intron | 15.0% |
| !!! | TATATTATTTTGTTATGCAT+TGG | + | chr5.4:50253860-50253879 | MS.gene64070:intron | 15.0% |
| !!! | TTGATTTTAAATCAAAAAGT+AGG | - | chr5.4:50254202-50254221 | None:intergenic | 15.0% |
| !!! | TTGGTATATTTTTTAGTTTA+TGG | + | chr5.4:50252520-50252539 | MS.gene64070:intron | 15.0% |
| !! | AAAACATTGAAAAAGATTAG+TGG | + | chr5.4:50254332-50254351 | MS.gene64070:intron | 20.0% |
| !! | AAACATTGAAAAAGATTAGT+GGG | + | chr5.4:50254333-50254352 | MS.gene64070:intron | 20.0% |
| !! | CTCAAAAAAAAATTGTAGAA+TGG | + | chr5.4:50252836-50252855 | MS.gene64070:intron | 20.0% |
| !! | TTAAAGAATAGTTAATCTCA+TGG | + | chr5.4:50253239-50253258 | MS.gene64070:intron | 20.0% |
| !!! | ATTTATCTTTTGGTTTTCAA+TGG | + | chr5.4:50253083-50253102 | MS.gene64070:intron | 20.0% |
| !!! | GAAATCATTTTTGTATTCTT+TGG | + | chr5.4:50254509-50254528 | MS.gene64070:intron | 20.0% |
| !!! | GATTCTTGAATTTTTGTTTA+TGG | + | chr5.4:50252726-50252745 | MS.gene64070:intron | 20.0% |
| !!! | GGATATATAAATGTGAATTT+TGG | + | chr5.4:50253422-50253441 | MS.gene64070:intron | 20.0% |
| !!! | TCTTTATTTTGTTTCTAACA+TGG | + | chr5.4:50253381-50253400 | MS.gene64070:intron | 20.0% |
| !!! | TGCTAAATTGTAATTCTTTT+GGG | + | chr5.4:50254802-50254821 | MS.gene64070:intron | 20.0% |
| !!! | TGTGATTCTTATTTGTTATA+TGG | + | chr5.4:50252492-50252511 | MS.gene64070:intron | 20.0% |
| ! | AAATCAGTTGTTCTCATTAT+TGG | - | chr5.4:50253549-50253568 | None:intergenic | 25.0% |
| ! | AACATTGAAAAAGATTAGTG+GGG | + | chr5.4:50254334-50254353 | MS.gene64070:intron | 25.0% |
| ! | AATGTCATTATTGACCAATT+GGG | + | chr5.4:50254540-50254559 | MS.gene64070:intron | 25.0% |
| ! | AATTTAACAGAAGAGACTAA+AGG | - | chr5.4:50254711-50254730 | None:intergenic | 25.0% |
| ! | AGTATATTCTCAACAAAAGT+GGG | - | chr5.4:50252814-50252833 | None:intergenic | 25.0% |
| ! | ATAATATTCGTGATACTTTC+AGG | + | chr5.4:50251738-50251757 | MS.gene64070:CDS | 25.0% |
| ! | ATTTAACAGAAGAGACTAAA+GGG | - | chr5.4:50254710-50254729 | None:intergenic | 25.0% |
| ! | GACAAGTTTCGTATATTTAA+TGG | - | chr5.4:50254688-50254707 | None:intergenic | 25.0% |
| ! | GACATAATTCAAAGTCTAAA+AGG | - | chr5.4:50252677-50252696 | None:intergenic | 25.0% |
| ! | TATATATAAGCCTTGAAGTT+TGG | - | chr5.4:50254420-50254439 | None:intergenic | 25.0% |
| ! | TGATGATTGATATAACAAGT+GGG | + | chr5.4:50252926-50252945 | MS.gene64070:intron | 25.0% |
| ! | TGGTAAATTAAACGTATTCT+TGG | + | chr5.4:50253442-50253461 | MS.gene64070:intron | 25.0% |
| ! | TGTCTAAGAATTATGTCTAA+AGG | + | chr5.4:50252693-50252712 | MS.gene64070:intron | 25.0% |
| ! | TTAAGAAAAAGACAAAGTGA+AGG | - | chr5.4:50252452-50252471 | None:intergenic | 25.0% |
| ! | TTATAATCGCTTATAAGTTG+AGG | + | chr5.4:50253789-50253808 | MS.gene64070:intron | 25.0% |
| ! | TTCACCTAAAATTGTCAATA+TGG | + | chr5.4:50254779-50254798 | MS.gene64070:intron | 25.0% |
| ! | TTGGGATTAAAGTTATAAAG+TGG | - | chr5.4:50254905-50254924 | None:intergenic | 25.0% |
| !! | CTGGAAAGAATCAATTTTAT+CGG | + | chr5.4:50251931-50251950 | MS.gene64070:intron | 25.0% |
| !! | GAAGTTTTTACCTTAATAAC+CGG | - | chr5.4:50251809-50251828 | None:intergenic | 25.0% |
| !! | GTGCTAAATTGTAATTCTTT+TGG | + | chr5.4:50254801-50254820 | MS.gene64070:intron | 25.0% |
| !!! | AAATTGTAATTCTTTTGGGT+AGG | + | chr5.4:50254806-50254825 | MS.gene64070:intron | 25.0% |
| !!! | AGTCTTGTATTTGTTGTTAT+GGG | + | chr5.4:50252559-50252578 | MS.gene64070:intron | 25.0% |
| !!! | AGTGGAACAATTTCATTTTT+TGG | - | chr5.4:50254238-50254257 | None:intergenic | 25.0% |
| !!! | ATAAAATTTTGAGTTTGGAG+TGG | + | chr5.4:50254437-50254456 | MS.gene64070:intron | 25.0% |
| !!! | TAGTCTTGTATTTGTTGTTA+TGG | + | chr5.4:50252558-50252577 | MS.gene64070:intron | 25.0% |
| !!! | TATTTGTTATATGGTTTCCT+TGG | + | chr5.4:50252501-50252520 | MS.gene64070:intron | 25.0% |
| !!! | TCAACTCTTTCTTTTTTAGT+TGG | + | chr5.4:50254146-50254165 | MS.gene64070:intron | 25.0% |
| AAATGAAATTGTTCCACTTG+TGG | + | chr5.4:50254240-50254259 | MS.gene64070:intron | 30.0% | |
| AATAACTGTGATCACTAGAA+TGG | + | chr5.4:50253960-50253979 | MS.gene64070:CDS | 30.0% | |
| AATTAAACGTATTCTTGGCA+TGG | + | chr5.4:50253447-50253466 | MS.gene64070:intron | 30.0% | |
| ACAAAAGTCAGTGACATTAT+TGG | - | chr5.4:50254953-50254972 | None:intergenic | 30.0% | |
| AGAAACAAAATAAAGAGCTG+TGG | - | chr5.4:50253377-50253396 | None:intergenic | 30.0% | |
| AGTCAACATCATTATTTGAG+GGG | - | chr5.4:50252991-50253010 | None:intergenic | 30.0% | |
| AGTCTCTTCTGTTAAATTGA+GGG | + | chr5.4:50254713-50254732 | MS.gene64070:intron | 30.0% | |
| ATAACTGTGATCACTAGAAT+GGG | + | chr5.4:50253961-50253980 | MS.gene64070:CDS | 30.0% | |
| ATGAGTTTAACAAGCTCATT+TGG | - | chr5.4:50253907-50253926 | None:intergenic | 30.0% | |
| CAATCTAAGTCTTTATCCAA+CGG | + | chr5.4:50253327-50253346 | MS.gene64070:intron | 30.0% | |
| CAGTCAACATCATTATTTGA+GGG | - | chr5.4:50252992-50253011 | None:intergenic | 30.0% | |
| GAAAAGACAAAAACATGTCT+TGG | - | chr5.4:50252759-50252778 | None:intergenic | 30.0% | |
| GAATGTCATTATTGACCAAT+TGG | + | chr5.4:50254539-50254558 | MS.gene64070:intron | 30.0% | |
| GAGTATATTCTCAACAAAAG+TGG | - | chr5.4:50252815-50252834 | None:intergenic | 30.0% | |
| GATGATTGATATAACAAGTG+GGG | + | chr5.4:50252927-50252946 | MS.gene64070:intron | 30.0% | |
| GTGATGATTGATATAACAAG+TGG | + | chr5.4:50252925-50252944 | MS.gene64070:intron | 30.0% | |
| GTTTCACTGAATTAATACAC+AGG | + | chr5.4:50254971-50254990 | MS.gene64070:intron | 30.0% | |
| GTTTCATTCATGATTGACAA+AGG | + | chr5.4:50252898-50252917 | MS.gene64070:intron | 30.0% | |
| TAGTCTCTTCTGTTAAATTG+AGG | + | chr5.4:50254712-50254731 | MS.gene64070:intron | 30.0% | |
| TCCTCAAAATTATCTGATCT+TGG | - | chr5.4:50252193-50252212 | None:intergenic | 30.0% | |
| TGAAGATGAAAATGTGAAAG+TGG | + | chr5.4:50252122-50252141 | MS.gene64070:intron | 30.0% | |
| TGATGTCTCTTTCTATAAGT+TGG | - | chr5.4:50254880-50254899 | None:intergenic | 30.0% | |
| TGGTCTAGTTATGTTAATGT+TGG | + | chr5.4:50253401-50253420 | MS.gene64070:intron | 30.0% | |
| ! | AGCACCATATTGACAATTTT+AGG | - | chr5.4:50254786-50254805 | None:intergenic | 30.0% |
| ! | ATGAGTGTTGTTATGATGTT+TGG | + | chr5.4:50251773-50251792 | MS.gene64070:CDS | 30.0% |
| ! | ATGTTTAATGTGGTTGGTAT+TGG | + | chr5.4:50252954-50252973 | MS.gene64070:intron | 30.0% |
| ! | GAAAGAATCAATTTTATCGG+TGG | + | chr5.4:50251934-50251953 | MS.gene64070:intron | 30.0% |
| ! | GTGTAGTTGATGTTAATATG+AGG | + | chr5.4:50253208-50253227 | MS.gene64070:intron | 30.0% |
| ! | TAATGAGAACAACTGATTTC+TGG | + | chr5.4:50253550-50253569 | MS.gene64070:CDS | 30.0% |
| ! | TGTTTAATGTGGTTGGTATT+GGG | + | chr5.4:50252955-50252974 | MS.gene64070:intron | 30.0% |
| !! | AAAGTGGATTTTGTATGTGT+AGG | + | chr5.4:50252138-50252157 | MS.gene64070:intron | 30.0% |
| !! | GATAATTTTGAGGAGAAGAA+TGG | + | chr5.4:50252199-50252218 | MS.gene64070:CDS | 30.0% |
| !! | TTATTTTGTTATGCATTGGC+AGG | + | chr5.4:50253864-50253883 | MS.gene64070:intron | 30.0% |
| AATGGGAGCTGAAAATATGA+GGG | + | chr5.4:50253978-50253997 | MS.gene64070:CDS | 35.0% | |
| ACTAGATTATGAGCTCATCA+CGG | - | chr5.4:50252073-50252092 | None:intergenic | 35.0% | |
| ACTATTTCACCTACTACAAG+TGG | - | chr5.4:50254478-50254497 | None:intergenic | 35.0% | |
| AGGATTGGAAAAACTCACTT+TGG | + | chr5.4:50254595-50254614 | MS.gene64070:intron | 35.0% | |
| ATCACGGTCAGTAAAAATCT+CGG | - | chr5.4:50252057-50252076 | None:intergenic | 35.0% | |
| ATGAGAATTACATACCCTGA+TGG | - | chr5.4:50254127-50254146 | None:intergenic | 35.0% | |
| ATGCATTTGATGAGAAATCC+AGG | + | chr5.4:50252263-50252282 | MS.gene64070:CDS | 35.0% | |
| ATTGAAAAAGATTAGTGGGG+AGG | + | chr5.4:50254337-50254356 | MS.gene64070:intron | 35.0% | |
| CAAAATCCAGTAGATTCAAG+AGG | - | chr5.4:50255239-50255258 | None:intergenic | 35.0% | |
| CAATCCTCAGACATAGTTAA+GGG | - | chr5.4:50254582-50254601 | None:intergenic | 35.0% | |
| CAGTTGTTCTCATTATTGGA+TGG | - | chr5.4:50253545-50253564 | None:intergenic | 35.0% | |
| CGTTGGATAAAGACTTAGAT+TGG | - | chr5.4:50253329-50253348 | None:intergenic | 35.0% | |
| CTAACTTCAATCCTTTGCAA+TGG | + | chr5.4:50253267-50253286 | MS.gene64070:intron | 35.0% | |
| GCAGTCAACATCATTATTTG+AGG | - | chr5.4:50252993-50253012 | None:intergenic | 35.0% | |
| GGGCATCTCTACAAAAATTT+GGG | - | chr5.4:50254745-50254764 | None:intergenic | 35.0% | |
| TAGGTGGGATTAGACTTTAA+GGG | + | chr5.4:50254825-50254844 | MS.gene64070:intron | 35.0% | |
| TATGCATGGAAACACCATAA+AGG | + | chr5.4:50254068-50254087 | MS.gene64070:CDS | 35.0% | |
| TATTCGCATAACATCGACAT+TGG | - | chr5.4:50252013-50252032 | None:intergenic | 35.0% | |
| TCAACTATGTTAGACCCAAT+TGG | - | chr5.4:50254557-50254576 | None:intergenic | 35.0% | |
| TCCTCTTAGAAATTCCACAT+GGG | - | chr5.4:50253706-50253725 | None:intergenic | 35.0% | |
| TGAATCCTCAAAACAAACCA+GGG | + | chr5.4:50253935-50253954 | MS.gene64070:CDS | 35.0% | |
| TTGAATCCTCAAAACAAACC+AGG | + | chr5.4:50253934-50253953 | MS.gene64070:CDS | 35.0% | |
| TTGCTTTCATCATTGCTGAA+AGG | + | chr5.4:50255183-50255202 | MS.gene64070:CDS | 35.0% | |
| TTTATGGTGTTTCCATGCAT+AGG | - | chr5.4:50254069-50254088 | None:intergenic | 35.0% | |
| TTTGACTAATGTATGTGAGC+TGG | + | chr5.4:50254377-50254396 | MS.gene64070:intron | 35.0% | |
| TTTGATGTTCACGAACAAGA+AGG | + | chr5.4:50255011-50255030 | MS.gene64070:CDS | 35.0% | |
| ! | AGGGCATCTCTACAAAAATT+TGG | - | chr5.4:50254746-50254765 | None:intergenic | 35.0% |
| ! | AGTGTTGTTATGATGTTTGG+TGG | + | chr5.4:50251776-50251795 | MS.gene64070:CDS | 35.0% |
| ! | ATCAATTTTATCGGTGGAGA+TGG | + | chr5.4:50251940-50251959 | MS.gene64070:intron | 35.0% |
| ! | GATTGTGAAGCATTAAGTCT+AGG | - | chr5.4:50255155-50255174 | None:intergenic | 35.0% |
| ! | GCCAAGATCAGATAATTTTG+AGG | + | chr5.4:50252189-50252208 | MS.gene64070:CDS | 35.0% |
| ! | TGGATTTTGTATGTGTAGGT+GGG | + | chr5.4:50252142-50252161 | MS.gene64070:intron | 35.0% |
| !! | ATGGTAAGGATTTGACTTGT+TGG | + | chr5.4:50251959-50251978 | MS.gene64070:intron | 35.0% |
| !! | TGTAATTCTTTTGGGTAGGT+GGG | + | chr5.4:50254810-50254829 | MS.gene64070:intron | 35.0% |
| !! | TTGTAATTCTTTTGGGTAGG+TGG | + | chr5.4:50254809-50254828 | MS.gene64070:intron | 35.0% |
| !!! | AATTTTGAGTTTGGAGTGGT+AGG | + | chr5.4:50254441-50254460 | MS.gene64070:intron | 35.0% |
| AACAAAGTGAGCAAGGAGAT+AGG | + | chr5.4:50252416-50252435 | MS.gene64070:CDS | 40.0% | |
| AATCCAGTAGATTCAAGAGG+AGG | - | chr5.4:50255236-50255255 | None:intergenic | 40.0% | |
| AGCAGGACAAATTGTCACAT+GGG | + | chr5.4:50254035-50254054 | MS.gene64070:CDS | 40.0% | |
| ATGTTATCCCCTCTGTAACT+AGG | - | chr5.4:50252235-50252254 | None:intergenic | 40.0% | |
| ATTCAAGGTCTTCCTGATTC+GGG | - | chr5.4:50251568-50251587 | None:intergenic | 40.0% | |
| CAAAGATTGTGAACCACAAG+TGG | - | chr5.4:50254256-50254275 | None:intergenic | 40.0% | |
| CCAATCCTCAGACATAGTTA+AGG | - | chr5.4:50254583-50254602 | None:intergenic | 40.0% | |
| CCTTAACTATGTCTGAGGAT+TGG | + | chr5.4:50254580-50254599 | MS.gene64070:intron | 40.0% | |
| CTAGTCAGTGATTGTTCGTA+TGG | - | chr5.4:50253600-50253619 | None:intergenic | 40.0% | |
| CTCCTCTTAGAAATTCCACA+TGG | - | chr5.4:50253707-50253726 | None:intergenic | 40.0% | |
| GAAGCTTCCACATCTAATCA+GGG | + | chr5.4:50254002-50254021 | MS.gene64070:CDS | 40.0% | |
| GAATCAGGAAGACCTTGAAT+CGG | + | chr5.4:50251568-50251587 | MS.gene64070:CDS | 40.0% | |
| GAATCCCTTAACTATGTCTG+AGG | + | chr5.4:50254575-50254594 | MS.gene64070:intron | 40.0% | |
| GAATGGGAGCTGAAAATATG+AGG | + | chr5.4:50253977-50253996 | MS.gene64070:CDS | 40.0% | |
| GATTCAAGGTCTTCCTGATT+CGG | - | chr5.4:50251569-50251588 | None:intergenic | 40.0% | |
| GGATGCATGTTTAATGTGGT+TGG | + | chr5.4:50252948-50252967 | MS.gene64070:intron | 40.0% | |
| GTACAAACCTTGATTCCCAA+GGG | - | chr5.4:50253738-50253757 | None:intergenic | 40.0% | |
| GTAGGTGGGATTAGACTTTA+AGG | + | chr5.4:50254824-50254843 | MS.gene64070:intron | 40.0% | |
| TACAGAGGGGATAACATCAA+CGG | + | chr5.4:50252238-50252257 | MS.gene64070:CDS | 40.0% | |
| TCACGGTCAGTAAAAATCTC+GGG | - | chr5.4:50252056-50252075 | None:intergenic | 40.0% | |
| TGAAGCTTCCACATCTAATC+AGG | + | chr5.4:50254001-50254020 | MS.gene64070:CDS | 40.0% | |
| TGAAGCTTCCTAGTTACAGA+GGG | + | chr5.4:50252224-50252243 | MS.gene64070:CDS | 40.0% | |
| TGATTGTGCTGAGAGCTTTA+AGG | + | chr5.4:50251703-50251722 | MS.gene64070:CDS | 40.0% | |
| TGTACAAACCTTGATTCCCA+AGG | - | chr5.4:50253739-50253758 | None:intergenic | 40.0% | |
| TTCACCGACCCAAATCATAT+GGG | - | chr5.4:50253661-50253680 | None:intergenic | 40.0% | |
| TTCACTGAACAAAGTGAGCA+AGG | + | chr5.4:50252409-50252428 | MS.gene64070:CDS | 40.0% | |
| TTCAGAGATGAATCATACCG+AGG | - | chr5.4:50254632-50254651 | None:intergenic | 40.0% | |
| TTTCACCGACCCAAATCATA+TGG | - | chr5.4:50253662-50253681 | None:intergenic | 40.0% | |
| ! | ACTAGGTTGGATTCAACTTC+TGG | + | chr5.4:50253615-50253634 | MS.gene64070:CDS | 40.0% |
| ! | ATATGATTTGGGTCGGTGAA+AGG | + | chr5.4:50253661-50253680 | MS.gene64070:CDS | 40.0% |
| ! | CATACGAACAATCACTGACT+AGG | + | chr5.4:50253598-50253617 | MS.gene64070:CDS | 40.0% |
| ! | GGATTTTGTATGTGTAGGTG+GGG | + | chr5.4:50252143-50252162 | MS.gene64070:intron | 40.0% |
| ! | GTGGATTTTGTATGTGTAGG+TGG | + | chr5.4:50252141-50252160 | MS.gene64070:intron | 40.0% |
| ! | TAATGTGGTTGGTATTGGGT+TGG | + | chr5.4:50252959-50252978 | MS.gene64070:intron | 40.0% |
| ! | TGGTCAAATGCCGGTTATTA+AGG | + | chr5.4:50251796-50251815 | MS.gene64070:CDS | 40.0% |
| ! | TTTTATCGGTGGAGATGGTA+AGG | + | chr5.4:50251945-50251964 | MS.gene64070:intron | 40.0% |
| !! | ACCTTTGAGACACTCTCAAA+AGG | - | chr5.4:50252787-50252806 | None:intergenic | 40.0% |
| !! | AGAACTTTGGAGGAGCATTT+GGG | + | chr5.4:50251641-50251660 | MS.gene64070:CDS | 40.0% |
| !! | GTAAGGATTTGACTTGTTGG+TGG | + | chr5.4:50251962-50251981 | MS.gene64070:intron | 40.0% |
| !! | TAGAACTTTGGAGGAGCATT+TGG | + | chr5.4:50251640-50251659 | MS.gene64070:CDS | 40.0% |
| !!! | ATTCTCCCTGGTTTGTTTTG+AGG | - | chr5.4:50253943-50253962 | None:intergenic | 40.0% |
| AAACGTATTCTTGGCATGGC+AGG | + | chr5.4:50253451-50253470 | MS.gene64070:intron | 45.0% | |
| AACACCATAAAGGCTCCATG+TGG | + | chr5.4:50254078-50254097 | MS.gene64070:CDS | 45.0% | |
| AACGCGTTTCTTCTTCAAGG+TGG | + | chr5.4:50251680-50251699 | MS.gene64070:CDS | 45.0% | |
| AAGAGGAGTTGCTAATCCCT+TGG | + | chr5.4:50253719-50253738 | MS.gene64070:CDS | 45.0% | |
| ACTTCCTGAATACCCGAATC+AGG | + | chr5.4:50251553-50251572 | MS.gene64070:CDS | 45.0% | |
| AGAGGAGTTGCTAATCCCTT+GGG | + | chr5.4:50253720-50253739 | MS.gene64070:CDS | 45.0% | |
| AGGTGAACAGCGAATCATCA+AGG | - | chr5.4:50254766-50254785 | None:intergenic | 45.0% | |
| CAAAATGTGACCGAGTGCAT+TGG | + | chr5.4:50255071-50255090 | MS.gene64070:CDS | 45.0% | |
| CACGGTCAGTAAAAATCTCG+GGG | - | chr5.4:50252055-50252074 | None:intergenic | 45.0% | |
| CATTTGGGTGAAGCTGCTAT+GGG | + | chr5.4:50251656-50251675 | MS.gene64070:CDS | 45.0% | |
| CTATGCAGAGGGTTACTCAA+TGG | + | chr5.4:50252377-50252396 | MS.gene64070:CDS | 45.0% | |
| GAAGCTTCCTAGTTACAGAG+GGG | + | chr5.4:50252225-50252244 | MS.gene64070:CDS | 45.0% | |
| GAGCAGGACAAATTGTCACA+TGG | + | chr5.4:50254034-50254053 | MS.gene64070:CDS | 45.0% | |
| GAGGGTTACTCAATGGAACT+TGG | + | chr5.4:50252384-50252403 | MS.gene64070:CDS | 45.0% | |
| GCCCATGTGGAATTTCTAAG+AGG | + | chr5.4:50253702-50253721 | MS.gene64070:CDS | 45.0% | |
| GCTTCACCAGCAAACACAAT+CGG | - | chr5.4:50251620-50251639 | None:intergenic | 45.0% | |
| GGAAACGCGTTTCTTCTTCA+AGG | + | chr5.4:50251677-50251696 | MS.gene64070:CDS | 45.0% | |
| GGTGAACAGCGAATCATCAA+GGG | - | chr5.4:50254765-50254784 | None:intergenic | 45.0% | |
| GTGAAGCTTCCTAGTTACAG+AGG | + | chr5.4:50252223-50252242 | MS.gene64070:CDS | 45.0% | |
| GTGATCACAGTTATTCTCCC+TGG | - | chr5.4:50253955-50253974 | None:intergenic | 45.0% | |
| GTGGGGATGCATGTTTAATG+TGG | + | chr5.4:50252944-50252963 | MS.gene64070:intron | 45.0% | |
| TAAGCACGAATCATCCTCTG+AGG | - | chr5.4:50252298-50252317 | None:intergenic | 45.0% | |
| TGATGAGAAATCCAGGACAC+CGG | + | chr5.4:50252270-50252289 | MS.gene64070:CDS | 45.0% | |
| TGCTAATCCCTTGGGAATCA+AGG | + | chr5.4:50253728-50253747 | MS.gene64070:CDS | 45.0% | |
| TGCTGGTGAAGCTAGAACTT+TGG | + | chr5.4:50251628-50251647 | MS.gene64070:CDS | 45.0% | |
| TGGTCTCTACTATGACTGCT+CGG | + | chr5.4:50253635-50253654 | MS.gene64070:CDS | 45.0% | |
| TGGTGAAGCTAGAACTTTGG+AGG | + | chr5.4:50251631-50251650 | MS.gene64070:CDS | 45.0% | |
| TGGTTATGCTGCTATGCAGA+GGG | + | chr5.4:50252366-50252385 | MS.gene64070:CDS | 45.0% | |
| TTGGCAGGTAAGTGACAAGA+TGG | + | chr5.4:50253879-50253898 | MS.gene64070:intron | 45.0% | |
| ! | CGAACAATCACTGACTAGGT+TGG | + | chr5.4:50253602-50253621 | MS.gene64070:CDS | 45.0% |
| ! | CTTCTCAGAGCTTTTGCTAC+TGG | + | chr5.4:50252343-50252362 | MS.gene64070:CDS | 45.0% |
| ! | GATGTTTGGTGGTCAAATGC+CGG | + | chr5.4:50251787-50251806 | MS.gene64070:CDS | 45.0% |
| ! | GTGTCTTCAGAACCGATTCA+AGG | - | chr5.4:50251583-50251602 | None:intergenic | 45.0% |
| ! | TTTGAGTTTGGAGTGGTAGG+TGG | + | chr5.4:50254444-50254463 | MS.gene64070:intron | 45.0% |
| !! | TCTTCCTGATTCGGGTATTC+AGG | - | chr5.4:50251560-50251579 | None:intergenic | 45.0% |
| !! | TTGGTGGATTTGAATCTGCG+AGG | + | chr5.4:50251978-50251997 | MS.gene64070:intron | 45.0% |
| !!! | GCCTTTTGAGAGTGTCTCAA+AGG | + | chr5.4:50252783-50252802 | MS.gene64070:intron | 45.0% |
| AACAGCTGCAGCCATTGCAA+AGG | - | chr5.4:50253281-50253300 | None:intergenic | 50.0% | |
| AATGTGACCGAGTGCATTGG+TGG | + | chr5.4:50255074-50255093 | MS.gene64070:CDS | 50.0% | |
| ACTGCTCGGCCCATATGATT+TGG | + | chr5.4:50253649-50253668 | MS.gene64070:CDS | 50.0% | |
| AGCAGCAGCCATGAATCCAA+GGG | - | chr5.4:50253508-50253527 | None:intergenic | 50.0% | |
| ATCTCGAGATGAACTCCTCC+TGG | - | chr5.4:50255044-50255063 | None:intergenic | 50.0% | |
| CAACTCGGTTAGCAAGCTCA+CGG | - | chr5.4:50253479-50253498 | None:intergenic | 50.0% | |
| CACCAGCAAACACAATCGGT+GGG | - | chr5.4:50251616-50251635 | None:intergenic | 50.0% | |
| CAGCCTCCTCTTGAATCTAC+TGG | + | chr5.4:50255230-50255249 | MS.gene64070:CDS | 50.0% | |
| CTGCTCGGCCCATATGATTT+GGG | + | chr5.4:50253650-50253669 | MS.gene64070:CDS | 50.0% | |
| CTTTGACCCACCAATGCACT+CGG | - | chr5.4:50255084-50255103 | None:intergenic | 50.0% | |
| CTTTGGCAATCTTTGCGCCT+CGG | + | chr5.4:50254612-50254631 | MS.gene64070:intron | 50.0% | |
| GAGACACTCTCAAAAGGCTG+TGG | - | chr5.4:50252781-50252800 | None:intergenic | 50.0% | |
| GAGACCACATGGAGCCTTTA+TGG | - | chr5.4:50254085-50254104 | None:intergenic | 50.0% | |
| GCAAAAGGGCCACTTGTAGT+AGG | + | chr5.4:50254466-50254485 | MS.gene64070:intron | 50.0% | |
| GCATTTGGGTGAAGCTGCTA+TGG | + | chr5.4:50251655-50251674 | MS.gene64070:CDS | 50.0% | |
| GGAGTTCATCTCGAGATGAC+AGG | + | chr5.4:50255047-50255066 | MS.gene64070:CDS | 50.0% | |
| GTATGTGAGCTGGTCCATGA+TGG | + | chr5.4:50254387-50254406 | MS.gene64070:intron | 50.0% | |
| GTATGTGTAGGTGGGGAGAA+TGG | + | chr5.4:50252150-50252169 | MS.gene64070:intron | 50.0% | |
| GTGGTTATGCTGCTATGCAG+AGG | + | chr5.4:50252365-50252384 | MS.gene64070:CDS | 50.0% | |
| TCACCAGCAAACACAATCGG+TGG | - | chr5.4:50251617-50251636 | None:intergenic | 50.0% | |
| TCTCGAGATGAACTCCTCCT+GGG | - | chr5.4:50255043-50255062 | None:intergenic | 50.0% | |
| TGGAGTGGTAGGTGGCAAAA+GGG | + | chr5.4:50254452-50254471 | MS.gene64070:intron | 50.0% | |
| TTGGAGTGGTAGGTGGCAAA+AGG | + | chr5.4:50254451-50254470 | MS.gene64070:intron | 50.0% | |
| TTTGCAATGGCTGCAGCTGT+TGG | + | chr5.4:50253280-50253299 | MS.gene64070:intron | 50.0% | |
| ! | ACATACCCTGATGGCATCGA+AGG | - | chr5.4:50254118-50254137 | None:intergenic | 50.0% |
| ! | AGTTTGGTAGCCCACCATCA+TGG | - | chr5.4:50254404-50254423 | None:intergenic | 50.0% |
| ! | ATACCCTGATGGCATCGAAG+GGG | - | chr5.4:50254116-50254135 | None:intergenic | 50.0% |
| ! | ATGTGACCGAGTGCATTGGT+GGG | + | chr5.4:50255075-50255094 | MS.gene64070:CDS | 50.0% |
| ! | CATACCCTGATGGCATCGAA+GGG | - | chr5.4:50254117-50254136 | None:intergenic | 50.0% |
| ! | CGAATCATCCTCTGAGGATC+CGG | - | chr5.4:50252292-50252311 | None:intergenic | 50.0% |
| ! | CTCAGAGCTTTTGCTACTGG+TGG | + | chr5.4:50252346-50252365 | MS.gene64070:CDS | 50.0% |
| ! | TCGGCCCATATGATTTGGGT+CGG | + | chr5.4:50253654-50253673 | MS.gene64070:CDS | 50.0% |
| ! | TTCCCACCGATTGTGTTTGC+TGG | + | chr5.4:50251611-50251630 | MS.gene64070:CDS | 50.0% |
| !! | TGGTGGGCTACCAAACTTCA+AGG | + | chr5.4:50254407-50254426 | MS.gene64070:intron | 50.0% |
| ATCCAAGGGCCTCGTCAACT+CGG | - | chr5.4:50253494-50253513 | None:intergenic | 55.0% | |
| CAGCAGCAGCCATGAATCCA+AGG | - | chr5.4:50253509-50253528 | None:intergenic | 55.0% | |
| CGCACTGCCCTGATTAGATG+TGG | - | chr5.4:50254012-50254031 | None:intergenic | 55.0% | |
| CTTGGATTCATGGCTGCTGC+TGG | + | chr5.4:50253507-50253526 | MS.gene64070:CDS | 55.0% | |
| GAACAAGAAGGAAGCCACCC+AGG | + | chr5.4:50255023-50255042 | MS.gene64070:CDS | 55.0% | |
| GTGAGCTGGTCCATGATGGT+GGG | + | chr5.4:50254391-50254410 | MS.gene64070:intron | 55.0% | |
| GTTAACAGCTGCAGAGCCGT+TGG | - | chr5.4:50253346-50253365 | None:intergenic | 55.0% | |
| TGACGAGGCCCTTGGATTCA+TGG | + | chr5.4:50253497-50253516 | MS.gene64070:CDS | 55.0% | |
| TGGGTCAGCGATCCTATGCA+TGG | + | chr5.4:50254054-50254073 | MS.gene64070:CDS | 55.0% | |
| TGTGAGCTGGTCCATGATGG+TGG | + | chr5.4:50254390-50254409 | MS.gene64070:intron | 55.0% | |
| TGTGTAGGTGGGGAGAATGG+CGG | + | chr5.4:50252153-50252172 | MS.gene64070:intron | 55.0% | |
| TTTGGGTCGGTGAAAGGACC+CGG | + | chr5.4:50253667-50253686 | MS.gene64070:CDS | 55.0% | |
| ! | GCTTGCTAACCGAGTTGACG+AGG | + | chr5.4:50253482-50253501 | MS.gene64070:CDS | 55.0% |
| ! | GTCTAGGATCGCAGTGTGTG+TGG | - | chr5.4:50255139-50255158 | None:intergenic | 55.0% |
| !!! | GGGCGAGTTTTGAGACCACA+TGG | - | chr5.4:50254096-50254115 | None:intergenic | 55.0% |
| ATCAGGGCAGTGCGTAGAGC+AGG | + | chr5.4:50254018-50254037 | MS.gene64070:CDS | 60.0% | |
| ATGGGCACCATCTAGCTGCC+GGG | - | chr5.4:50253688-50253707 | None:intergenic | 60.0% | |
| CAAGAAGGAAGCCACCCAGG+AGG | + | chr5.4:50255026-50255045 | MS.gene64070:CDS | 60.0% | |
| CATGGGCACCATCTAGCTGC+CGG | - | chr5.4:50253689-50253708 | None:intergenic | 60.0% | |
| CGAGATGAACTCCTCCTGGG+TGG | - | chr5.4:50255040-50255059 | None:intergenic | 60.0% | |
| GAAAGGACCCGGCAGCTAGA+TGG | + | chr5.4:50253678-50253697 | MS.gene64070:CDS | 60.0% | |
| GCAGCTAGATGGTGCCCATG+TGG | + | chr5.4:50253689-50253708 | MS.gene64070:CDS | 60.0% | |
| GTGTAGGTGGGGAGAATGGC+GGG | + | chr5.4:50252154-50252173 | MS.gene64070:intron | 60.0% | |
| TCGCCCCTTCGATGCCATCA+GGG | + | chr5.4:50254110-50254129 | MS.gene64070:CDS | 60.0% | |
| ! | AACCGAGTTGACGAGGCCCT+TGG | + | chr5.4:50253489-50253508 | MS.gene64070:CDS | 60.0% |
| CCAGGACACCGGATCCTCAG+AGG | + | chr5.4:50252281-50252300 | MS.gene64070:CDS | 65.0% | |
| CTCGCCCCTTCGATGCCATC+AGG | + | chr5.4:50254109-50254128 | MS.gene64070:CDS | 65.0% | |
| ! | CCTCTGAGGATCCGGTGTCC+TGG | - | chr5.4:50252284-50252303 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 50251542 | 50255259 | 50251542 | ID=MS.gene64070 |
| chr5.4 | mRNA | 50251542 | 50255259 | 50251542 | ID=MS.gene64070.t1;Parent=MS.gene64070 |
| chr5.4 | exon | 50251542 | 50251817 | 50251542 | ID=MS.gene64070.t1.exon1;Parent=MS.gene64070.t1 |
| chr5.4 | CDS | 50251542 | 50251817 | 50251542 | ID=cds.MS.gene64070.t1;Parent=MS.gene64070.t1 |
| chr5.4 | exon | 50252160 | 50252437 | 50252160 | ID=MS.gene64070.t1.exon2;Parent=MS.gene64070.t1 |
| chr5.4 | CDS | 50252160 | 50252437 | 50252160 | ID=cds.MS.gene64070.t1;Parent=MS.gene64070.t1 |
| chr5.4 | exon | 50253473 | 50253749 | 50253473 | ID=MS.gene64070.t1.exon3;Parent=MS.gene64070.t1 |
| chr5.4 | CDS | 50253473 | 50253749 | 50253473 | ID=cds.MS.gene64070.t1;Parent=MS.gene64070.t1 |
| chr5.4 | exon | 50253886 | 50254131 | 50253886 | ID=MS.gene64070.t1.exon4;Parent=MS.gene64070.t1 |
| chr5.4 | CDS | 50253886 | 50254131 | 50253886 | ID=cds.MS.gene64070.t1;Parent=MS.gene64070.t1 |
| chr5.4 | exon | 50254993 | 50255259 | 50254993 | ID=MS.gene64070.t1.exon5;Parent=MS.gene64070.t1 |
| chr5.4 | CDS | 50254993 | 50255259 | 50254993 | ID=cds.MS.gene64070.t1;Parent=MS.gene64070.t1 |
| Gene Sequence |
| Protein sequence |
