Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70487.t1 | XP_003601480.1 | 98.6 | 516 | 2 | 3 | 1 | 513 | 1 | 514 | 3.70E-281 | 976.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70487.t1 | P52417 | 96.1 | 512 | 18 | 1 | 4 | 513 | 1 | 512 | 3.1e-276 | 951.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70487.t1 | G7J834 | 98.6 | 516 | 2 | 3 | 1 | 513 | 1 | 514 | 2.7e-281 | 976.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene70487 | 0.844893 | 5.70E-59 | -1.69E-46 |
| MS.gene049758 | MS.gene70487 | 0.817435 | 3.30E-52 | -1.69E-46 |
| MS.gene050099 | MS.gene70487 | 0.834909 | 2.28E-56 | -1.69E-46 |
| MS.gene050301 | MS.gene70487 | 0.848842 | 4.73E-60 | -1.69E-46 |
| MS.gene050516 | MS.gene70487 | 0.840776 | 7.09E-58 | -1.69E-46 |
| MS.gene050558 | MS.gene70487 | 0.800323 | 1.52E-48 | -1.69E-46 |
| MS.gene051663 | MS.gene70487 | 0.816684 | 4.87E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene70487 | 0.800607 | 1.33E-48 | -1.69E-46 |
| MS.gene052207 | MS.gene70487 | 0.870884 | 1.04E-66 | -1.69E-46 |
| MS.gene052287 | MS.gene70487 | 0.825671 | 4.13E-54 | -1.69E-46 |
| MS.gene052326 | MS.gene70487 | 0.802588 | 5.23E-49 | -1.69E-46 |
| MS.gene053520 | MS.gene70487 | 0.80136 | 9.34E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene70487 | 0.827892 | 1.22E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene70487 | 0.824183 | 9.26E-54 | -1.69E-46 |
| MS.gene05455 | MS.gene70487 | 0.801822 | 7.51E-49 | -1.69E-46 |
| MS.gene055277 | MS.gene70487 | 0.823448 | 1.38E-53 | -1.69E-46 |
| MS.gene055390 | MS.gene70487 | 0.862657 | 4.34E-64 | -1.69E-46 |
| MS.gene055422 | MS.gene70487 | 0.835364 | 1.75E-56 | -1.69E-46 |
| MS.gene055428 | MS.gene70487 | 0.817028 | 4.08E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene70487 | 0.825899 | 3.65E-54 | -1.69E-46 |
| MS.gene056931 | MS.gene70487 | 0.841213 | 5.45E-58 | -1.69E-46 |
| MS.gene056933 | MS.gene70487 | 0.840147 | 1.04E-57 | -1.69E-46 |
| MS.gene056935 | MS.gene70487 | 0.827467 | 1.54E-54 | -1.69E-46 |
| MS.gene057121 | MS.gene70487 | 0.833694 | 4.60E-56 | -1.69E-46 |
| MS.gene057439 | MS.gene70487 | 0.80752 | 4.86E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene70487 | 0.800178 | 1.63E-48 | -1.69E-46 |
| MS.gene057469 | MS.gene70487 | 0.854152 | 1.49E-61 | -1.69E-46 |
| MS.gene058002 | MS.gene70487 | 0.825026 | 5.87E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene70487 | 0.838258 | 3.20E-57 | -1.69E-46 |
| MS.gene058660 | MS.gene70487 | 0.814816 | 1.27E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene70487 | 0.807059 | 6.08E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene70487 | 0.808077 | 3.70E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene70487 | 0.817589 | 3.05E-52 | -1.69E-46 |
| MS.gene06037 | MS.gene70487 | 0.825587 | 4.32E-54 | -1.69E-46 |
| MS.gene060559 | MS.gene70487 | 0.847515 | 1.10E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70487.t1 | MTR_3g082150 | 98.643 | 516 | 2 | 3 | 1 | 513 | 1 | 514 | 0.0 | 1036 |
| MS.gene70487.t1 | MTR_5g097010 | 90.097 | 515 | 49 | 2 | 1 | 513 | 1 | 515 | 0.0 | 913 |
| MS.gene70487.t1 | MTR_4g131760 | 53.968 | 504 | 208 | 8 | 27 | 513 | 25 | 521 | 0.0 | 543 |
| MS.gene70487.t1 | MTR_7g111020 | 52.031 | 517 | 222 | 11 | 11 | 513 | 24 | 528 | 0.0 | 531 |
| MS.gene70487.t1 | MTR_3g112070 | 55.195 | 462 | 186 | 6 | 57 | 513 | 85 | 530 | 0.0 | 522 |
| MS.gene70487.t1 | MTR_4g070430 | 50.415 | 482 | 223 | 8 | 45 | 513 | 50 | 528 | 1.81e-169 | 489 |
| MS.gene70487.t1 | MTR_3g116860 | 55.936 | 438 | 185 | 6 | 81 | 513 | 84 | 518 | 3.53e-169 | 488 |
| MS.gene70487.t1 | MTR_7g111020 | 56.000 | 400 | 165 | 8 | 121 | 513 | 1 | 396 | 4.46e-161 | 463 |
| MS.gene70487.t1 | MTR_4g070430 | 49.417 | 429 | 201 | 8 | 45 | 460 | 50 | 475 | 5.09e-147 | 430 |
| MS.gene70487.t1 | MTR_7g104380 | 83.019 | 53 | 9 | 0 | 363 | 415 | 4 | 56 | 1.49e-23 | 99.4 |
| MS.gene70487.t1 | MTR_6g014000 | 87.273 | 55 | 7 | 0 | 417 | 471 | 266 | 320 | 2.43e-22 | 100 |
| MS.gene70487.t1 | MTR_3g056715 | 65.116 | 43 | 15 | 0 | 371 | 413 | 28 | 70 | 5.98e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70487.t1 | AT5G48300 | 87.308 | 520 | 59 | 4 | 1 | 513 | 1 | 520 | 0.0 | 897 |
| MS.gene70487.t1 | AT5G19220 | 52.724 | 514 | 226 | 8 | 14 | 513 | 12 | 522 | 0.0 | 547 |
| MS.gene70487.t1 | AT1G27680 | 57.306 | 438 | 180 | 4 | 81 | 513 | 83 | 518 | 0.0 | 532 |
| MS.gene70487.t1 | AT4G39210 | 49.275 | 483 | 226 | 7 | 45 | 513 | 44 | 521 | 1.44e-168 | 487 |
| MS.gene70487.t1 | AT4G39210 | 49.275 | 483 | 226 | 7 | 45 | 513 | 44 | 521 | 1.44e-168 | 487 |
| MS.gene70487.t1 | AT2G21590 | 47.438 | 527 | 244 | 9 | 14 | 513 | 3 | 523 | 1.40e-166 | 482 |
| MS.gene70487.t1 | AT2G21590 | 47.438 | 527 | 244 | 9 | 14 | 513 | 3 | 523 | 1.40e-166 | 482 |
| MS.gene70487.t1 | AT2G21590 | 47.438 | 527 | 244 | 9 | 14 | 513 | 3 | 523 | 1.40e-166 | 482 |
| MS.gene70487.t1 | AT2G21590 | 47.438 | 527 | 244 | 9 | 14 | 513 | 3 | 523 | 1.40e-166 | 482 |
| MS.gene70487.t1 | AT2G21590 | 47.438 | 527 | 244 | 9 | 14 | 513 | 3 | 523 | 1.40e-166 | 482 |
| MS.gene70487.t1 | AT2G21590 | 47.438 | 527 | 244 | 9 | 14 | 513 | 3 | 523 | 1.40e-166 | 482 |
| MS.gene70487.t1 | AT2G21590 | 47.438 | 527 | 244 | 9 | 14 | 513 | 3 | 523 | 1.40e-166 | 482 |
| MS.gene70487.t1 | AT1G05610 | 45.708 | 466 | 234 | 6 | 50 | 513 | 28 | 476 | 4.89e-144 | 422 |
| MS.gene70487.t1 | AT1G05610 | 45.940 | 468 | 236 | 6 | 50 | 513 | 28 | 482 | 7.57e-144 | 422 |
Find 118 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGGTTGATACTACTATTT+TGG | 0.118247 | 3.1:-66857926 | MS.gene70487:intron |
| ATGCGGTGAGGCAATATTTA+TGG | 0.227198 | 3.1:-66858267 | MS.gene70487:CDS |
| TATTGAGGACACATTGTTAA+TGG | 0.236148 | 3.1:-66857101 | MS.gene70487:CDS |
| CTTATTTATACGATGGATAC+TGG | 0.239223 | 3.1:-66857624 | MS.gene70487:CDS |
| GCTTTCAACTGTTCTCCTTT+TGG | 0.240994 | 3.1:+66858037 | None:intergenic |
| AATGCCTTATATTGCTAGTA+TGG | 0.245338 | 3.1:-66857878 | MS.gene70487:CDS |
| GGCTTTCTATAATGCAAATC+TGG | 0.253113 | 3.1:-66857581 | MS.gene70487:CDS |
| CTGTTTAGGCAGTTGCTAAC+AGG | 0.290907 | 3.1:+66858566 | None:intergenic |
| TTCCTGGTGCAAACGACTTC+GGG | 0.322270 | 3.1:-66857804 | MS.gene70487:CDS |
| TGGTGAAGGATGTGTAATTA+AGG | 0.325714 | 3.1:-66857333 | MS.gene70487:intron |
| CTTATTACCTGGAACCAGTT+TGG | 0.329824 | 3.1:+66858398 | None:intergenic |
| TTAGAATACTTAGTTCTTGC+TGG | 0.342172 | 3.1:-66858223 | MS.gene70487:CDS |
| GATATCACTGACAGTGTTAT+TGG | 0.346869 | 3.1:-66857353 | MS.gene70487:CDS |
| ATTGAGGACACATTGTTAAT+GGG | 0.348660 | 3.1:-66857100 | MS.gene70487:CDS |
| ATTCCTGGTGCAACCGAACT+TGG | 0.354432 | 3.1:-66857772 | MS.gene70487:CDS |
| TGAGAATCCAAACTGGTTCC+AGG | 0.364521 | 3.1:-66858405 | MS.gene70487:intron |
| ATTGACAAGAATGCTAGAAT+TGG | 0.372887 | 3.1:-66856872 | MS.gene70487:CDS |
| TTTGCCCGCTTCTTGGTCAA+TGG | 0.378602 | 3.1:+66858632 | None:intergenic |
| CTGCTCCGCGACAAGTTTCC+TGG | 0.384999 | 3.1:-66857820 | MS.gene70487:CDS |
| GGCAGTGTTCCGATTGGTAT+TGG | 0.386912 | 3.1:-66856923 | MS.gene70487:CDS |
| TCTTTGATATGTTACTGTTT+AGG | 0.387072 | 3.1:+66858552 | None:intergenic |
| AATAACACTGTCAGTGATAT+CGG | 0.401987 | 3.1:+66857355 | None:intergenic |
| ATACCCATACTAGCAATATA+AGG | 0.403964 | 3.1:+66857874 | None:intergenic |
| GCAAGAATTCTCATATCAAA+AGG | 0.408139 | 3.1:-66856901 | MS.gene70487:CDS |
| TCAATTCAGCATCCTTGAAC+AGG | 0.414585 | 3.1:-66858511 | MS.gene70487:CDS |
| TTCGGGAGTGAAGTTATTCC+TGG | 0.424087 | 3.1:-66857787 | MS.gene70487:CDS |
| AGCCATCTATATGGCTTCAA+TGG | 0.429672 | 3.1:-66859824 | None:intergenic |
| TGGAACCAGTTTGGATTCTC+AGG | 0.429926 | 3.1:+66858407 | None:intergenic |
| TCTTACTCTCATCCCAAGTT+CGG | 0.430739 | 3.1:+66857759 | None:intergenic |
| GAAGCACGTGCCACTGCATT+CGG | 0.431857 | 3.1:-66858109 | MS.gene70487:CDS |
| GCAAGAAGAAGAGAAAACTA+TGG | 0.442679 | 3.1:-66859676 | MS.gene70487:CDS |
| TCGGCATCAAGCATCTTAGA+TGG | 0.445226 | 3.1:+66857374 | None:intergenic |
| CAACTAACTCTGCTAGCATC+TGG | 0.445818 | 3.1:+66859586 | None:intergenic |
| GCCCTTCATTGTTTCTCCCA+AGG | 0.449571 | 3.1:-66859647 | MS.gene70487:CDS |
| GTGCTTGGTATTATACTTGG+AGG | 0.450420 | 3.1:-66858677 | MS.gene70487:CDS |
| TACCGAGGTTGGGTGTAGAT+TGG | 0.453915 | 3.1:+66857404 | None:intergenic |
| AGTGTGCTTGGTATTATACT+TGG | 0.461794 | 3.1:-66858680 | MS.gene70487:CDS |
| GCAAAACCAGCTGTTCCTCT+TGG | 0.462674 | 3.1:-66858614 | MS.gene70487:CDS |
| CATAATCCATTCGATACAAA+TGG | 0.464442 | 3.1:+66858197 | None:intergenic |
| TTTCCTGGTGCAAACGACTT+CGG | 0.467233 | 3.1:-66857805 | MS.gene70487:CDS |
| CTCCCGAAGTCGTTTGCACC+AGG | 0.468057 | 3.1:+66857802 | None:intergenic |
| ACATTAAGTTACCTAAAATC+TGG | 0.468640 | 3.1:+66857538 | None:intergenic |
| TGCTTGGTATTATACTTGGA+GGG | 0.476032 | 3.1:-66858676 | MS.gene70487:CDS |
| TTCCTCTTGGAGCAAACTAT+AGG | 0.479293 | 3.1:-66858601 | MS.gene70487:CDS |
| TCTAATGAAGATTGATGAAG+AGG | 0.482467 | 3.1:-66858086 | MS.gene70487:CDS |
| AGTTACCTAAAATCTGGTAC+TGG | 0.484700 | 3.1:+66857544 | None:intergenic |
| TCTTCTTCTTGCTGAAACTG+TGG | 0.487806 | 3.1:+66859687 | None:intergenic |
| ATGGAGGCAAATACCGAGGT+TGG | 0.492596 | 3.1:+66857393 | None:intergenic |
| AAAATTCATCATTCTGTCGT+TGG | 0.493813 | 3.1:-66857154 | MS.gene70487:CDS |
| TTGGAATCAGAAACAGCCTT+GGG | 0.500304 | 3.1:+66859631 | None:intergenic |
| TTTGCTCCAAGAGGAACAGC+TGG | 0.502679 | 3.1:+66858608 | None:intergenic |
| TGGGATTGTCACAGTAATCA+AGG | 0.507999 | 3.1:-66856561 | MS.gene70487:CDS |
| GTGGCACGTGCTTCATCCAT+TGG | 0.509798 | 3.1:+66858118 | None:intergenic |
| ACGGGACAAGTGCCTGTTCA+AGG | 0.513295 | 3.1:+66858499 | None:intergenic |
| TGCTGCAGACAGATGCTGAT+AGG | 0.514976 | 3.1:-66856964 | MS.gene70487:intron |
| GCTTGGTATTATACTTGGAG+GGG | 0.521975 | 3.1:-66858675 | MS.gene70487:CDS |
| TGGAGGCAAATACCGAGGTT+GGG | 0.523382 | 3.1:+66857394 | None:intergenic |
| TTATCCATTGACCAAGAAGC+GGG | 0.524482 | 3.1:-66858636 | MS.gene70487:CDS |
| ATCCCAAGTTCGGTTGCACC+AGG | 0.525786 | 3.1:+66857769 | None:intergenic |
| CTTGGTATTATACTTGGAGG+GGG | 0.527339 | 3.1:-66858674 | MS.gene70487:CDS |
| GAATTTGCCGAGAAGCCAAA+AGG | 0.527957 | 3.1:-66858052 | MS.gene70487:CDS |
| GAGATTTATACAAGCACATA+GGG | 0.529017 | 3.1:-66858173 | MS.gene70487:CDS |
| CAAGAATTCTCATATCAAAA+GGG | 0.532293 | 3.1:-66856900 | MS.gene70487:CDS |
| TTCCTGGTGCAACCGAACTT+GGG | 0.535911 | 3.1:-66857771 | MS.gene70487:CDS |
| CAATGGATAAAGACGCGTCC+CGG | 0.540169 | 3.1:+66858649 | None:intergenic |
| AGAGATTTATACAAGCACAT+AGG | 0.540805 | 3.1:-66858174 | MS.gene70487:CDS |
| AGAGTCCTGAGAATCCAAAC+TGG | 0.541444 | 3.1:-66858412 | MS.gene70487:CDS |
| GAAGATGAGGAAGAAGAAGA+AGG | 0.545219 | 3.1:+66859778 | None:intergenic |
| GCTTTCTATAATGCAAATCT+GGG | 0.546112 | 3.1:-66857580 | MS.gene70487:CDS |
| GTGCAAGCTTATTTATACGA+TGG | 0.548370 | 3.1:-66857631 | MS.gene70487:CDS |
| CCATGTTGCTCGCATATGCA+CGG | 0.549892 | 3.1:+66858480 | None:intergenic |
| TGTTTAGGCAGTTGCTAACA+GGG | 0.550516 | 3.1:+66858567 | None:intergenic |
| CGTGCATATGCGAGCAACAT+GGG | 0.553230 | 3.1:-66858479 | MS.gene70487:CDS |
| ATCAGAAGGTGCAATTATTG+AGG | 0.553577 | 3.1:-66857116 | MS.gene70487:CDS |
| TTTAGATGATGAAGAAGATG+AGG | 0.554142 | 3.1:+66859765 | None:intergenic |
| ATCCATTGGCAATGCAGCAA+CGG | 0.557333 | 3.1:+66858132 | None:intergenic |
| CACCGTTGCTGCATTGCCAA+TGG | 0.558190 | 3.1:-66858134 | MS.gene70487:CDS |
| TTTGGAATCAGAAACAGCCT+TGG | 0.565050 | 3.1:+66859630 | None:intergenic |
| ATGCCTTATATTGCTAGTAT+GGG | 0.567877 | 3.1:-66857877 | MS.gene70487:CDS |
| TTATTTATACGATGGATACT+GGG | 0.571162 | 3.1:-66857623 | MS.gene70487:CDS |
| AGCCTTGGGAGAAACAATGA+AGG | 0.573342 | 3.1:+66859645 | None:intergenic |
| CAATGTGCAAGAAGCTGCAA+GGG | 0.577474 | 3.1:-66856609 | MS.gene70487:CDS |
| GAATTCTTGCCAATACCAAT+CGG | 0.579260 | 3.1:+66856914 | None:intergenic |
| TTGAGGACACATTGTTAATG+GGG | 0.585614 | 3.1:-66857099 | MS.gene70487:CDS |
| GGAAGACATCGGTACAATTG+AGG | 0.587153 | 3.1:-66857602 | MS.gene70487:CDS |
| ACAATGTGCAAGAAGCTGCA+AGG | 0.590355 | 3.1:-66856610 | MS.gene70487:CDS |
| TGGTGACCATTTGTATCGAA+TGG | 0.590390 | 3.1:-66858203 | MS.gene70487:CDS |
| CATGTTGCTCGCATATGCAC+GGG | 0.591727 | 3.1:+66858481 | None:intergenic |
| AGCCTATAGTTTGCTCCAAG+AGG | 0.591774 | 3.1:+66858599 | None:intergenic |
| CTGCGATCTTGCATATCAGA+AGG | 0.601789 | 3.1:-66857130 | MS.gene70487:CDS |
| ATGGCTTCAATGGCTTCGAT+CGG | 0.602135 | 3.1:-66859814 | MS.gene70487:CDS |
| GAATGAGAGGTTGCGTGCAA+TGG | 0.614906 | 3.1:+66859741 | None:intergenic |
| GCTAAAGGCAGTGTTCCGAT+TGG | 0.615135 | 3.1:-66856929 | MS.gene70487:CDS |
| CTAATGAAGATTGATGAAGA+GGG | 0.625579 | 3.1:-66858085 | MS.gene70487:CDS |
| TGCAGACAGATGCTGATAGG+AGG | 0.629052 | 3.1:-66856961 | MS.gene70487:intron |
| CCGTGCATATGCGAGCAACA+TGG | 0.631421 | 3.1:-66858480 | MS.gene70487:CDS |
| TTTATCCATTGACCAAGAAG+CGG | 0.635327 | 3.1:-66858637 | MS.gene70487:CDS |
| TCTCGATGACGAGAGAGCAA+AGG | 0.636235 | 3.1:-66857902 | MS.gene70487:CDS |
| CTCCAATCTACACCCAACCT+CGG | 0.638794 | 3.1:-66857406 | MS.gene70487:CDS |
| ACTGACAGTGTTATTGGTGA+AGG | 0.639826 | 3.1:-66857347 | MS.gene70487:CDS |
| CTTTAGATGACAGTTCCACT+CGG | 0.643445 | 3.1:+66856527 | None:intergenic |
| TAGAATTGGAGACGATGTGA+AGG | 0.652530 | 3.1:-66856858 | MS.gene70487:intron |
| GCCTTGGGAGAAACAATGAA+GGG | 0.652631 | 3.1:+66859646 | None:intergenic |
| ATTACAGGGAACTGCAGATG+CGG | 0.654738 | 3.1:-66858284 | MS.gene70487:intron |
| TGAGGACACATTGTTAATGG+GGG | 0.655322 | 3.1:-66857098 | MS.gene70487:CDS |
| CTTCATTAGACCGAATGCAG+TGG | 0.656858 | 3.1:+66858099 | None:intergenic |
| TTCACTTCATCACAGCTCTG+TGG | 0.657603 | 3.1:-66859721 | MS.gene70487:CDS |
| GCATCAAGCATCTTAGATGG+AGG | 0.658896 | 3.1:+66857377 | None:intergenic |
| GAAGCTGCAAGGGAAACTGA+AGG | 0.667346 | 3.1:-66856599 | MS.gene70487:CDS |
| TAATGAAGATTGATGAAGAG+GGG | 0.674324 | 3.1:-66858084 | MS.gene70487:CDS |
| AGGGAACTGCAGATGCGGTG+AGG | 0.678286 | 3.1:-66858279 | MS.gene70487:CDS |
| TTGCACCAGGAAACTTGTCG+CGG | 0.680161 | 3.1:+66857815 | None:intergenic |
| GATGGATACTGGGAAGACAT+CGG | 0.689450 | 3.1:-66857613 | MS.gene70487:CDS |
| GCATATGCGAGCAACATGGG+TGG | 0.694220 | 3.1:-66858476 | MS.gene70487:CDS |
| AAGGATGCATTGATTCCGAG+TGG | 0.694244 | 3.1:-66856542 | MS.gene70487:CDS |
| GCTGTGATGAAGTGAATGAG+AGG | 0.715121 | 3.1:+66859728 | None:intergenic |
| ATGCTGAATTGAATTGTGTG+AGG | 0.733174 | 3.1:+66858522 | None:intergenic |
| TTAGATGGAGGCAAATACCG+AGG | 0.735785 | 3.1:+66857389 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTAATCAAAGTTTAAA+TGG | - | chr3.1:66859655-66859674 | MS.gene70487:CDS | 10.0% |
| !! | CAAAAAAAGAACATATTATA+TGG | + | chr3.1:66858345-66858364 | None:intergenic | 15.0% |
| !!! | TGATTTTCTCAAATTATTAT+CGG | + | chr3.1:66857265-66857284 | None:intergenic | 15.0% |
| !! | AACAACAGAAAACATATATA+AGG | + | chr3.1:66857974-66857993 | None:intergenic | 20.0% |
| !! | AACTATATTTGAATTTGGTA+GGG | - | chr3.1:66857598-66857617 | MS.gene70487:CDS | 20.0% |
| !! | ACAAATTTGTACATATTTCT+TGG | - | chr3.1:66859087-66859106 | MS.gene70487:intron | 20.0% |
| !! | ACTATCACACTAATTTAAAA+TGG | - | chr3.1:66857190-66857209 | MS.gene70487:intron | 20.0% |
| !! | TTAGGAACTATATTTGAATT+TGG | - | chr3.1:66857593-66857612 | MS.gene70487:CDS | 20.0% |
| !!! | AAGGTTATTTCATAAAAAGT+GGG | - | chr3.1:66859763-66859782 | MS.gene70487:CDS | 20.0% |
| !!! | AATTTGAGTTTGTTGATAAT+GGG | - | chr3.1:66856921-66856940 | MS.gene70487:CDS | 20.0% |
| !!! | AGGGAAAAATATGAATTTTT+TGG | + | chr3.1:66859045-66859064 | None:intergenic | 20.0% |
| !!! | AGTTATGACTTTTTTGTATT+AGG | - | chr3.1:66858399-66858418 | MS.gene70487:intron | 20.0% |
| !!! | GATGAATTTTTGACATAAAA+TGG | - | chr3.1:66857002-66857021 | MS.gene70487:intron | 20.0% |
| !!! | GTAATGTAATGATTTTATGA+TGG | - | chr3.1:66857633-66857652 | MS.gene70487:CDS | 20.0% |
| !!! | TAATTTGAGTTTGTTGATAA+TGG | - | chr3.1:66856920-66856939 | MS.gene70487:CDS | 20.0% |
| !!! | TGATATTGTAGTTTGTTTTT+GGG | - | chr3.1:66856950-66856969 | MS.gene70487:CDS | 20.0% |
| !!! | TTGATATTGTAGTTTGTTTT+TGG | - | chr3.1:66856949-66856968 | MS.gene70487:CDS | 20.0% |
| !!! | TTTATTTGAGTTTTTGTATG+TGG | - | chr3.1:66857071-66857090 | MS.gene70487:intron | 20.0% |
| ! | AACAAACATTAAACATAAGC+TGG | + | chr3.1:66858884-66858903 | None:intergenic | 25.0% |
| ! | ACATTAAGTTACCTAAAATC+TGG | + | chr3.1:66858808-66858827 | None:intergenic | 25.0% |
| ! | ACTATATTTGAATTTGGTAG+GGG | - | chr3.1:66857599-66857618 | MS.gene70487:CDS | 25.0% |
| ! | AGCTTATGTTTAATGTTTGT+TGG | - | chr3.1:66858883-66858902 | MS.gene70487:intron | 25.0% |
| ! | ATTCACACAATATTATCATG+TGG | - | chr3.1:66857467-66857486 | MS.gene70487:intron | 25.0% |
| ! | CAAGAATTCTCATATCAAAA+GGG | - | chr3.1:66859443-66859462 | MS.gene70487:intron | 25.0% |
| ! | CAGTAGGATGAATAAATAAA+AGG | + | chr3.1:66858834-66858853 | None:intergenic | 25.0% |
| ! | GAACTATATTTGAATTTGGT+AGG | - | chr3.1:66857597-66857616 | MS.gene70487:CDS | 25.0% |
| ! | GCTTATGTTTAATGTTTGTT+GGG | - | chr3.1:66858884-66858903 | MS.gene70487:intron | 25.0% |
| ! | GGAACAAAATATTGAAAACA+AGG | + | chr3.1:66859159-66859178 | None:intergenic | 25.0% |
| ! | GTTAAAATAAAACAGACAGT+AGG | + | chr3.1:66858850-66858869 | None:intergenic | 25.0% |
| ! | TAATAGTTCTTGCTTTGTAT+TGG | + | chr3.1:66857529-66857548 | None:intergenic | 25.0% |
| ! | TCTTTGATATGTTACTGTTT+AGG | + | chr3.1:66857794-66857813 | None:intergenic | 25.0% |
| ! | TTATTTATACGATGGATACT+GGG | - | chr3.1:66858720-66858739 | MS.gene70487:intron | 25.0% |
| ! | TTCACACAATATTATCATGT+GGG | - | chr3.1:66857468-66857487 | MS.gene70487:intron | 25.0% |
| ! | TTGACATTATCAATCATATG+AGG | + | chr3.1:66857148-66857167 | None:intergenic | 25.0% |
| !! | ATGTTACGTGTTTTATGTAT+TGG | - | chr3.1:66857043-66857062 | MS.gene70487:intron | 25.0% |
| !! | GAAGGTTATTTCATAAAAAG+TGG | - | chr3.1:66859762-66859781 | MS.gene70487:CDS | 25.0% |
| !! | TGTTACGTGTTTTATGTATT+GGG | - | chr3.1:66857044-66857063 | MS.gene70487:intron | 25.0% |
| !!! | AATTCATCATTTTTCCAATC+TGG | + | chr3.1:66856990-66857009 | None:intergenic | 25.0% |
| !!! | GATTTTAGGTAACTTAATGT+TGG | - | chr3.1:66858808-66858827 | MS.gene70487:intron | 25.0% |
| !!! | TAGGTTGATACTACTATTTT+GGG | - | chr3.1:66858418-66858437 | MS.gene70487:CDS | 25.0% |
| !!! | TTAGGTTGATACTACTATTT+TGG | - | chr3.1:66858417-66858436 | MS.gene70487:CDS | 25.0% |
| !!! | TTCAATATTGGTTTTCTGAT+TGG | - | chr3.1:66859354-66859373 | MS.gene70487:intron | 25.0% |
| !!! | TTCTCAATGTTTTAGCAATT+GGG | - | chr3.1:66856891-66856910 | MS.gene70487:CDS | 25.0% |
| !!! | TTTCTCAATGTTTTAGCAAT+TGG | - | chr3.1:66856890-66856909 | MS.gene70487:CDS | 25.0% |
| AAAATTCATCATTCTGTCGT+TGG | - | chr3.1:66859189-66859208 | MS.gene70487:intron | 30.0% | |
| AATAACACTGTCAGTGATAT+CGG | + | chr3.1:66858991-66859010 | None:intergenic | 30.0% | |
| AATGCCTTATATTGCTAGTA+TGG | - | chr3.1:66858465-66858484 | MS.gene70487:CDS | 30.0% | |
| AGAGATTTATACAAGCACAT+AGG | - | chr3.1:66858169-66858188 | MS.gene70487:CDS | 30.0% | |
| AGTGCAAATAATGTCATGAT+TGG | + | chr3.1:66857173-66857192 | None:intergenic | 30.0% | |
| ATACCCATACTAGCAATATA+AGG | + | chr3.1:66858472-66858491 | None:intergenic | 30.0% | |
| ATATAAGGTTGCTTATTACC+TGG | + | chr3.1:66857959-66857978 | None:intergenic | 30.0% | |
| ATGCCTTATATTGCTAGTAT+GGG | - | chr3.1:66858466-66858485 | MS.gene70487:CDS | 30.0% | |
| ATTGACAAGAATGCTAGAAT+TGG | - | chr3.1:66859471-66859490 | MS.gene70487:intron | 30.0% | |
| ATTGAGGACACATTGTTAAT+GGG | - | chr3.1:66859243-66859262 | MS.gene70487:intron | 30.0% | |
| CATAATCCATTCGATACAAA+TGG | + | chr3.1:66858149-66858168 | None:intergenic | 30.0% | |
| CTAATGAAGATTGATGAAGA+GGG | - | chr3.1:66858258-66858277 | MS.gene70487:CDS | 30.0% | |
| CTTATTTATACGATGGATAC+TGG | - | chr3.1:66858719-66858738 | MS.gene70487:intron | 30.0% | |
| CTTTGTATTGAACAGATAGA+AGG | + | chr3.1:66858613-66858632 | None:intergenic | 30.0% | |
| GAGATTTATACAAGCACATA+GGG | - | chr3.1:66858170-66858189 | MS.gene70487:CDS | 30.0% | |
| GCAAGAATTCTCATATCAAA+AGG | - | chr3.1:66859442-66859461 | MS.gene70487:intron | 30.0% | |
| GCTTTCTATAATGCAAATCT+GGG | - | chr3.1:66858763-66858782 | MS.gene70487:intron | 30.0% | |
| TAATGAAGATTGATGAAGAG+GGG | - | chr3.1:66858259-66858278 | MS.gene70487:CDS | 30.0% | |
| TAGTGAGAGATAGAGAAAAT+GGG | - | chr3.1:66856829-66856848 | MS.gene70487:intron | 30.0% | |
| TATTGAGGACACATTGTTAA+TGG | - | chr3.1:66859242-66859261 | MS.gene70487:intron | 30.0% | |
| TCTAATGAAGATTGATGAAG+AGG | - | chr3.1:66858257-66858276 | MS.gene70487:CDS | 30.0% | |
| TCTCAAATTATTATCGGTGT+CGG | + | chr3.1:66857259-66857278 | None:intergenic | 30.0% | |
| TGAATGCTTTCACTATTACA+GGG | - | chr3.1:66858045-66858064 | MS.gene70487:CDS | 30.0% | |
| TGTCATATTGTGACGTTAAT+AGG | - | chr3.1:66859300-66859319 | MS.gene70487:intron | 30.0% | |
| TTGAATGCTTTCACTATTAC+AGG | - | chr3.1:66858044-66858063 | MS.gene70487:CDS | 30.0% | |
| TTTAGATGATGAAGAAGATG+AGG | + | chr3.1:66856581-66856600 | None:intergenic | 30.0% | |
| TTTATTGCTATGATCACTTG+TGG | - | chr3.1:66857998-66858017 | MS.gene70487:intron | 30.0% | |
| ! | TGCATTTTGAATATGAAGCA+AGG | + | chr3.1:66857380-66857399 | None:intergenic | 30.0% |
| ! | TTAGAATACTTAGTTCTTGC+TGG | - | chr3.1:66858120-66858139 | MS.gene70487:CDS | 30.0% |
| ! | TTTAATGTTTGTTGGGACAT+TGG | - | chr3.1:66858891-66858910 | MS.gene70487:intron | 30.0% |
| !! | GGAAGTACTAACTTCAATAT+TGG | - | chr3.1:66859342-66859361 | MS.gene70487:intron | 30.0% |
| !! | TTTGAGTTTTTGTATGTGGT+TGG | - | chr3.1:66857075-66857094 | MS.gene70487:intron | 30.0% |
| !!! | GTTTGTTTTTGGGTTTCTTA+AGG | - | chr3.1:66856960-66856979 | MS.gene70487:intron | 30.0% |
| ACATAAGCTGGCTGTTATTA+TGG | + | chr3.1:66858872-66858891 | None:intergenic | 35.0% | |
| ACTCAATTGCACAAACAATG+AGG | + | chr3.1:66857416-66857435 | None:intergenic | 35.0% | |
| AGTGAGAGATAGAGAAAATG+GGG | - | chr3.1:66856830-66856849 | MS.gene70487:intron | 35.0% | |
| AGTGTGCTTGGTATTATACT+TGG | - | chr3.1:66857663-66857682 | MS.gene70487:intron | 35.0% | |
| AGTTACCTAAAATCTGGTAC+TGG | + | chr3.1:66858802-66858821 | None:intergenic | 35.0% | |
| AGTTGAAAGCTATGAAAGTG+AGG | - | chr3.1:66858319-66858338 | MS.gene70487:intron | 35.0% | |
| ATACTAGTAACGATGGAGTA+GGG | + | chr3.1:66859064-66859083 | None:intergenic | 35.0% | |
| ATGCCTAACACAAAAAATGC+AGG | + | chr3.1:66857568-66857587 | None:intergenic | 35.0% | |
| ATGCTGAATTGAATTGTGTG+AGG | + | chr3.1:66857824-66857843 | None:intergenic | 35.0% | |
| ATGGGTGGTTACAAAAATGA+AGG | - | chr3.1:66857882-66857901 | MS.gene70487:CDS | 35.0% | |
| CAAAAATGAAGGTTTCGTTG+AGG | - | chr3.1:66857893-66857912 | MS.gene70487:CDS | 35.0% | |
| CATATATGTCAATGTCGTGA+AGG | - | chr3.1:66857301-66857320 | MS.gene70487:intron | 35.0% | |
| GAATTCTTGCCAATACCAAT+CGG | + | chr3.1:66859432-66859451 | None:intergenic | 35.0% | |
| GATATCACTGACAGTGTTAT+TGG | - | chr3.1:66858990-66859009 | MS.gene70487:intron | 35.0% | |
| GCAAGAAGAAGAGAAAACTA+TGG | - | chr3.1:66856667-66856686 | MS.gene70487:intron | 35.0% | |
| GGCTTTCTATAATGCAAATC+TGG | - | chr3.1:66858762-66858781 | MS.gene70487:intron | 35.0% | |
| GTAGTGAGAGATAGAGAAAA+TGG | - | chr3.1:66856828-66856847 | MS.gene70487:intron | 35.0% | |
| GTGCAAGCTTATTTATACGA+TGG | - | chr3.1:66858712-66858731 | MS.gene70487:intron | 35.0% | |
| TGCCTAACACAAAAAATGCA+GGG | + | chr3.1:66857567-66857586 | None:intergenic | 35.0% | |
| TGCTTGGTATTATACTTGGA+GGG | - | chr3.1:66857667-66857686 | MS.gene70487:intron | 35.0% | |
| TGGTCAAAATCTATGAAGCA+CGG | - | chr3.1:66857210-66857229 | MS.gene70487:intron | 35.0% | |
| TGGTGAAGGATGTGTAATTA+AGG | - | chr3.1:66859010-66859029 | MS.gene70487:intron | 35.0% | |
| TTGAGGACACATTGTTAATG+GGG | - | chr3.1:66859244-66859263 | MS.gene70487:intron | 35.0% | |
| TTGTGTTAGGCATGTTTGTT+AGG | - | chr3.1:66857575-66857594 | MS.gene70487:CDS | 35.0% | |
| TTTATCCATTGACCAAGAAG+CGG | - | chr3.1:66857706-66857725 | MS.gene70487:intron | 35.0% | |
| TTTCTTAAGGTAGACCAGAT+TGG | - | chr3.1:66856973-66856992 | MS.gene70487:intron | 35.0% | |
| ! | AAAAGCCAGTACCAGATTTT+AGG | - | chr3.1:66858794-66858813 | MS.gene70487:intron | 35.0% |
| ! | AAGACAAGTCTGTGAGTTTT+TGG | + | chr3.1:66856734-66856753 | None:intergenic | 35.0% |
| ! | ATCAGAAGGTGCAATTATTG+AGG | - | chr3.1:66859227-66859246 | MS.gene70487:intron | 35.0% |
| ! | GCAATATTTATGGCTTTTCG+AGG | - | chr3.1:66858086-66858105 | MS.gene70487:CDS | 35.0% |
| ! | TGATGAATTTTGCAGTTCTG+TGG | + | chr3.1:66859180-66859199 | None:intergenic | 35.0% |
| !! | GGAATTGACTTTAGTTTGAC+TGG | - | chr3.1:66859321-66859340 | MS.gene70487:intron | 35.0% |
| !!! | AAAATCTGGTACTGGCTTTT+TGG | + | chr3.1:66858794-66858813 | None:intergenic | 35.0% |
| !!! | AACCCTGCATTTTTTGTGTT+AGG | - | chr3.1:66857562-66857581 | MS.gene70487:CDS | 35.0% |
| AATGGGGGCAGATTATTATG+AGG | - | chr3.1:66859260-66859279 | MS.gene70487:intron | 40.0% | |
| ACGTATTTGCGAATCTGCTT+AGG | - | chr3.1:66858690-66858709 | MS.gene70487:intron | 40.0% | |
| AGAGAACAATGCACTTAGAC+AGG | + | chr3.1:66859561-66859580 | None:intergenic | 40.0% | |
| ATGCGGTGAGGCAATATTTA+TGG | - | chr3.1:66858076-66858095 | MS.gene70487:CDS | 40.0% | |
| CATACTAGTAACGATGGAGT+AGG | + | chr3.1:66859065-66859084 | None:intergenic | 40.0% | |
| CATGAATGTGGAGCAAGATA+TGG | + | chr3.1:66859591-66859610 | None:intergenic | 40.0% | |
| CTACTCCATCGTTACTAGTA+TGG | - | chr3.1:66859063-66859082 | MS.gene70487:intron | 40.0% | |
| CTTATTACCTGGAACCAGTT+TGG | + | chr3.1:66857948-66857967 | None:intergenic | 40.0% | |
| CTTGGTATTATACTTGGAGG+GGG | - | chr3.1:66857669-66857688 | MS.gene70487:intron | 40.0% | |
| GAAGATGAGGAAGAAGAAGA+AGG | + | chr3.1:66856568-66856587 | None:intergenic | 40.0% | |
| GCTTGGTATTATACTTGGAG+GGG | - | chr3.1:66857668-66857687 | MS.gene70487:intron | 40.0% | |
| GTGCTTGGTATTATACTTGG+AGG | - | chr3.1:66857666-66857685 | MS.gene70487:intron | 40.0% | |
| TAGAATTGGAGACGATGTGA+AGG | - | chr3.1:66859485-66859504 | MS.gene70487:intron | 40.0% | |
| TATGAAGCAAGGACATTCCT+TGG | + | chr3.1:66857369-66857388 | None:intergenic | 40.0% | |
| TCAATTCAGCATCCTTGAAC+AGG | - | chr3.1:66857832-66857851 | MS.gene70487:CDS | 40.0% | |
| TCTTACTCTCATCCCAAGTT+CGG | + | chr3.1:66858587-66858606 | None:intergenic | 40.0% | |
| TCTTCTTCTTGCTGAAACTG+TGG | + | chr3.1:66856659-66856678 | None:intergenic | 40.0% | |
| TGAGGACACATTGTTAATGG+GGG | - | chr3.1:66859245-66859264 | MS.gene70487:intron | 40.0% | |
| TGGGATTGTCACAGTAATCA+AGG | - | chr3.1:66859782-66859801 | MS.gene70487:CDS | 40.0% | |
| TGGTGACCATTTGTATCGAA+TGG | - | chr3.1:66858140-66858159 | MS.gene70487:CDS | 40.0% | |
| TGTTTAGGCAGTTGCTAACA+GGG | + | chr3.1:66857779-66857798 | None:intergenic | 40.0% | |
| TTATCCATTGACCAAGAAGC+GGG | - | chr3.1:66857707-66857726 | MS.gene70487:intron | 40.0% | |
| TTCCTCTTGGAGCAAACTAT+AGG | - | chr3.1:66857742-66857761 | MS.gene70487:intron | 40.0% | |
| TTGGAATCAGAAACAGCCTT+GGG | + | chr3.1:66856715-66856734 | None:intergenic | 40.0% | |
| TTGTGCCATACTAGTAACGA+TGG | + | chr3.1:66859071-66859090 | None:intergenic | 40.0% | |
| ! | ACTGACAGTGTTATTGGTGA+AGG | - | chr3.1:66858996-66859015 | MS.gene70487:intron | 40.0% |
| ! | AGATGCTGATAGGAGGTTTT+TGG | - | chr3.1:66859389-66859408 | MS.gene70487:intron | 40.0% |
| ! | CAATATTATCATGTGGGCTG+TGG | - | chr3.1:66857474-66857493 | MS.gene70487:intron | 40.0% |
| ! | GCTTTCAACTGTTCTCCTTT+TGG | + | chr3.1:66858309-66858328 | None:intergenic | 40.0% |
| ! | TTTGGAATCAGAAACAGCCT+TGG | + | chr3.1:66856716-66856735 | None:intergenic | 40.0% |
| ACAATGTGCAAGAAGCTGCA+AGG | - | chr3.1:66859733-66859752 | MS.gene70487:CDS | 45.0% | |
| ACATTCATGCTGGAAGAGTG+AGG | - | chr3.1:66859602-66859621 | MS.gene70487:CDS | 45.0% | |
| AGAGTCCTGAGAATCCAAAC+TGG | - | chr3.1:66857931-66857950 | MS.gene70487:intron | 45.0% | |
| AGCCTTGGGAGAAACAATGA+AGG | + | chr3.1:66856701-66856720 | None:intergenic | 45.0% | |
| ATCCATTGGCAATGCAGCAA+CGG | + | chr3.1:66858214-66858233 | None:intergenic | 45.0% | |
| ATCTTGCTCCACATTCATGC+TGG | - | chr3.1:66859592-66859611 | MS.gene70487:intron | 45.0% | |
| ATGGCTTCAATGGCTTCGAT+CGG | - | chr3.1:66856529-66856548 | MS.gene70487:CDS | 45.0% | |
| ATTACAGGGAACTGCAGATG+CGG | - | chr3.1:66858059-66858078 | MS.gene70487:CDS | 45.0% | |
| CAACTAACTCTGCTAGCATC+TGG | + | chr3.1:66856760-66856779 | None:intergenic | 45.0% | |
| CAATGTGCAAGAAGCTGCAA+GGG | - | chr3.1:66859734-66859753 | MS.gene70487:CDS | 45.0% | |
| CATTCATGCTGGAAGAGTGA+GGG | - | chr3.1:66859603-66859622 | MS.gene70487:CDS | 45.0% | |
| CTGCGATCTTGCATATCAGA+AGG | - | chr3.1:66859213-66859232 | MS.gene70487:intron | 45.0% | |
| CTGTTTAGGCAGTTGCTAAC+AGG | + | chr3.1:66857780-66857799 | None:intergenic | 45.0% | |
| CTTCATTAGACCGAATGCAG+TGG | + | chr3.1:66858247-66858266 | None:intergenic | 45.0% | |
| GAATTTGCCGAGAAGCCAAA+AGG | - | chr3.1:66858291-66858310 | MS.gene70487:intron | 45.0% | |
| GATGGATACTGGGAAGACAT+CGG | - | chr3.1:66858730-66858749 | MS.gene70487:intron | 45.0% | |
| GCAAGGACATTCCTTGGATT+AGG | + | chr3.1:66857363-66857382 | None:intergenic | 45.0% | |
| GCATCAAGCATCTTAGATGG+AGG | + | chr3.1:66858969-66858988 | None:intergenic | 45.0% | |
| GCCTTGGGAGAAACAATGAA+GGG | + | chr3.1:66856700-66856719 | None:intergenic | 45.0% | |
| GCTGTGATGAAGTGAATGAG+AGG | + | chr3.1:66856618-66856637 | None:intergenic | 45.0% | |
| GGAAGACATCGGTACAATTG+AGG | - | chr3.1:66858741-66858760 | MS.gene70487:intron | 45.0% | |
| TCACTCTTCCAGCATGAATG+TGG | + | chr3.1:66859603-66859622 | None:intergenic | 45.0% | |
| TCGGCATCAAGCATCTTAGA+TGG | + | chr3.1:66858972-66858991 | None:intergenic | 45.0% | |
| TGGAACCAGTTTGGATTCTC+AGG | + | chr3.1:66857939-66857958 | None:intergenic | 45.0% | |
| TTAGATGGAGGCAAATACCG+AGG | + | chr3.1:66858957-66858976 | None:intergenic | 45.0% | |
| TTCACTTCATCACAGCTCTG+TGG | - | chr3.1:66856622-66856641 | MS.gene70487:CDS | 45.0% | |
| TTCGGGAGTGAAGTTATTCC+TGG | - | chr3.1:66858556-66858575 | MS.gene70487:CDS | 45.0% | |
| TTTCCTGGTGCAAACGACTT+CGG | - | chr3.1:66858538-66858557 | MS.gene70487:CDS | 45.0% | |
| ! | GATGGTTTTCAGAGTGTGCT+TGG | - | chr3.1:66857651-66857670 | MS.gene70487:intron | 45.0% |
| ! | TGAGAATCCAAACTGGTTCC+AGG | - | chr3.1:66857938-66857957 | MS.gene70487:intron | 45.0% |
| ! | TGTCAATGTCGTGAAGGTGT+CGG | - | chr3.1:66857307-66857326 | MS.gene70487:intron | 45.0% |
| !! | AAGGATGCATTGATTCCGAG+TGG | - | chr3.1:66859801-66859820 | MS.gene70487:CDS | 45.0% |
| !! | AGCCTATAGTTTGCTCCAAG+AGG | + | chr3.1:66857747-66857766 | None:intergenic | 45.0% |
| !!! | AGGAGGTTTTTGGCTGCTAA+AGG | - | chr3.1:66859399-66859418 | MS.gene70487:intron | 45.0% |
| !!! | CTGTTCTCCTTTTGGCTTCT+CGG | + | chr3.1:66858301-66858320 | None:intergenic | 45.0% |
| ACAGGGACACACCTAATCCA+AGG | - | chr3.1:66857349-66857368 | MS.gene70487:CDS | 50.0% | |
| ATGGAGGCAAATACCGAGGT+TGG | + | chr3.1:66858953-66858972 | None:intergenic | 50.0% | |
| ATTCCTGGTGCAACCGAACT+TGG | - | chr3.1:66858571-66858590 | MS.gene70487:CDS | 50.0% | |
| CAATGGATAAAGACGCGTCC+CGG | + | chr3.1:66857697-66857716 | None:intergenic | 50.0% | |
| CATGTTGCTCGCATATGCAC+GGG | + | chr3.1:66857865-66857884 | None:intergenic | 50.0% | |
| CCATGTTGCTCGCATATGCA+CGG | + | chr3.1:66857866-66857885 | None:intergenic | 50.0% | |
| CGTGCATATGCGAGCAACAT+GGG | - | chr3.1:66857864-66857883 | MS.gene70487:CDS | 50.0% | |
| CTCCAATCTACACCCAACCT+CGG | - | chr3.1:66858937-66858956 | MS.gene70487:intron | 50.0% | |
| CTGGAAGAGTGAGGGAAATG+GGG | - | chr3.1:66859611-66859630 | MS.gene70487:CDS | 50.0% | |
| GAAGCTGCAAGGGAAACTGA+AGG | - | chr3.1:66859744-66859763 | MS.gene70487:CDS | 50.0% | |
| GAATGAGAGGTTGCGTGCAA+TGG | + | chr3.1:66856605-66856624 | None:intergenic | 50.0% | |
| GATTAGGTGTGTCCCTGTGT+CGG | + | chr3.1:66857347-66857366 | None:intergenic | 50.0% | |
| GCAAAACCAGCTGTTCCTCT+TGG | - | chr3.1:66857729-66857748 | MS.gene70487:intron | 50.0% | |
| GCTAAAGGCAGTGTTCCGAT+TGG | - | chr3.1:66859414-66859433 | MS.gene70487:intron | 50.0% | |
| GCTGGAAGAGTGAGGGAAAT+GGG | - | chr3.1:66859610-66859629 | MS.gene70487:CDS | 50.0% | |
| GGCAGTGTTCCGATTGGTAT+TGG | - | chr3.1:66859420-66859439 | MS.gene70487:intron | 50.0% | |
| TACCGAGGTTGGGTGTAGAT+TGG | + | chr3.1:66858942-66858961 | None:intergenic | 50.0% | |
| TCTCGATGACGAGAGAGCAA+AGG | - | chr3.1:66858441-66858460 | MS.gene70487:CDS | 50.0% | |
| TGCAGACAGATGCTGATAGG+AGG | - | chr3.1:66859382-66859401 | MS.gene70487:intron | 50.0% | |
| TGCTGCAGACAGATGCTGAT+AGG | - | chr3.1:66859379-66859398 | MS.gene70487:intron | 50.0% | |
| TGCTGGAAGAGTGAGGGAAA+TGG | - | chr3.1:66859609-66859628 | MS.gene70487:CDS | 50.0% | |
| TGGAAGAGTGAGGGAAATGG+GGG | - | chr3.1:66859612-66859631 | MS.gene70487:CDS | 50.0% | |
| TGGAGGCAAATACCGAGGTT+GGG | + | chr3.1:66858952-66858971 | None:intergenic | 50.0% | |
| TTCCTGGTGCAAACGACTTC+GGG | - | chr3.1:66858539-66858558 | MS.gene70487:CDS | 50.0% | |
| TTCCTGGTGCAACCGAACTT+GGG | - | chr3.1:66858572-66858591 | MS.gene70487:CDS | 50.0% | |
| TTGCACCAGGAAACTTGTCG+CGG | + | chr3.1:66858531-66858550 | None:intergenic | 50.0% | |
| TTTGCCCGCTTCTTGGTCAA+TGG | + | chr3.1:66857714-66857733 | None:intergenic | 50.0% | |
| TTTGCTCCAAGAGGAACAGC+TGG | + | chr3.1:66857738-66857757 | None:intergenic | 50.0% | |
| ! | ATTATACTTGGAGGGGGTGC+CGG | - | chr3.1:66857675-66857694 | MS.gene70487:intron | 50.0% |
| ! | GCCCTTCATTGTTTCTCCCA+AGG | - | chr3.1:66856696-66856715 | MS.gene70487:intron | 50.0% |
| ACGGGACAAGTGCCTGTTCA+AGG | + | chr3.1:66857847-66857866 | None:intergenic | 55.0% | |
| ATCCCAAGTTCGGTTGCACC+AGG | + | chr3.1:66858577-66858596 | None:intergenic | 55.0% | |
| CACCGTTGCTGCATTGCCAA+TGG | - | chr3.1:66858209-66858228 | MS.gene70487:CDS | 55.0% | |
| CCGTGCATATGCGAGCAACA+TGG | - | chr3.1:66857863-66857882 | MS.gene70487:CDS | 55.0% | |
| GCATATGCGAGCAACATGGG+TGG | - | chr3.1:66857867-66857886 | MS.gene70487:CDS | 55.0% | |
| GTGGCACGTGCTTCATCCAT+TGG | + | chr3.1:66858228-66858247 | None:intergenic | 55.0% | |
| ! | GAAGCACGTGCCACTGCATT+CGG | - | chr3.1:66858234-66858253 | MS.gene70487:CDS | 55.0% |
| ! | GTGGGCTGTGGCTGTTAGAT+TGG | - | chr3.1:66857486-66857505 | MS.gene70487:intron | 55.0% |
| !! | TTATACTTGGAGGGGGTGCC+GGG | - | chr3.1:66857676-66857695 | MS.gene70487:intron | 55.0% |
| !!! | AGCTGGTTTTGCCCGCTTCT+TGG | + | chr3.1:66857721-66857740 | None:intergenic | 55.0% |
| ACTGACGCGTGTCCGACACA+GGG | - | chr3.1:66857332-66857351 | MS.gene70487:intron | 60.0% | |
| AGGGAACTGCAGATGCGGTG+AGG | - | chr3.1:66858064-66858083 | MS.gene70487:CDS | 60.0% | |
| CTCCCGAAGTCGTTTGCACC+AGG | + | chr3.1:66858544-66858563 | None:intergenic | 60.0% | |
| CTGCTCCGCGACAAGTTTCC+TGG | - | chr3.1:66858523-66858542 | MS.gene70487:CDS | 60.0% | |
| CACTGACGCGTGTCCGACAC+AGG | - | chr3.1:66857331-66857350 | MS.gene70487:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 66856529 | 66859836 | 66856529 | ID=MS.gene70487 |
| chr3.1 | mRNA | 66856529 | 66859836 | 66856529 | ID=MS.gene70487.t1;Parent=MS.gene70487 |
| chr3.1 | exon | 66859594 | 66859836 | 66859594 | ID=MS.gene70487.t1.exon1;Parent=MS.gene70487.t1 |
| chr3.1 | CDS | 66859594 | 66859836 | 66859594 | ID=cds.MS.gene70487.t1;Parent=MS.gene70487.t1 |
| chr3.1 | exon | 66858406 | 66858702 | 66858406 | ID=MS.gene70487.t1.exon2;Parent=MS.gene70487.t1 |
| chr3.1 | CDS | 66858406 | 66858702 | 66858406 | ID=cds.MS.gene70487.t1;Parent=MS.gene70487.t1 |
| chr3.1 | exon | 66858030 | 66858299 | 66858030 | ID=MS.gene70487.t1.exon3;Parent=MS.gene70487.t1 |
| chr3.1 | CDS | 66858030 | 66858299 | 66858030 | ID=cds.MS.gene70487.t1;Parent=MS.gene70487.t1 |
| chr3.1 | exon | 66857765 | 66857944 | 66857765 | ID=MS.gene70487.t1.exon4;Parent=MS.gene70487.t1 |
| chr3.1 | CDS | 66857765 | 66857944 | 66857765 | ID=cds.MS.gene70487.t1;Parent=MS.gene70487.t1 |
| chr3.1 | exon | 66857550 | 66857653 | 66857550 | ID=MS.gene70487.t1.exon5;Parent=MS.gene70487.t1 |
| chr3.1 | CDS | 66857550 | 66857653 | 66857550 | ID=cds.MS.gene70487.t1;Parent=MS.gene70487.t1 |
| chr3.1 | exon | 66857334 | 66857445 | 66857334 | ID=MS.gene70487.t1.exon6;Parent=MS.gene70487.t1 |
| chr3.1 | CDS | 66857334 | 66857445 | 66857334 | ID=cds.MS.gene70487.t1;Parent=MS.gene70487.t1 |
| chr3.1 | exon | 66857084 | 66857182 | 66857084 | ID=MS.gene70487.t1.exon7;Parent=MS.gene70487.t1 |
| chr3.1 | CDS | 66857084 | 66857182 | 66857084 | ID=cds.MS.gene70487.t1;Parent=MS.gene70487.t1 |
| chr3.1 | exon | 66856859 | 66856978 | 66856859 | ID=MS.gene70487.t1.exon8;Parent=MS.gene70487.t1 |
| chr3.1 | CDS | 66856859 | 66856978 | 66856859 | ID=cds.MS.gene70487.t1;Parent=MS.gene70487.t1 |
| chr3.1 | exon | 66856529 | 66856645 | 66856529 | ID=MS.gene70487.t1.exon9;Parent=MS.gene70487.t1 |
| chr3.1 | CDS | 66856529 | 66856645 | 66856529 | ID=cds.MS.gene70487.t1;Parent=MS.gene70487.t1 |
| Gene Sequence |
| Protein sequence |
