Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71691.t1 | XP_013470074.1 | 97.6 | 579 | 9 | 1 | 1 | 574 | 1 | 579 | 7.10E-306 | 1059.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71691.t1 | Q9LT68 | 76.7 | 587 | 113 | 5 | 1 | 574 | 1 | 576 | 3.4e-240 | 832.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71691.t1 | A0A072VQN5 | 97.6 | 579 | 9 | 1 | 1 | 574 | 1 | 579 | 5.1e-306 | 1059.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene71691 | 0.809711 | 1.65E-50 | -1.69E-46 |
| MS.gene049356 | MS.gene71691 | 0.813937 | 1.99E-51 | -1.69E-46 |
| MS.gene050122 | MS.gene71691 | 0.820028 | 8.52E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene71691 | 0.819526 | 1.11E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene71691 | 0.823922 | 1.07E-53 | -1.69E-46 |
| MS.gene050812 | MS.gene71691 | 0.819328 | 1.23E-52 | -1.69E-46 |
| MS.gene051360 | MS.gene71691 | 0.803222 | 3.86E-49 | -1.69E-46 |
| MS.gene052011 | MS.gene71691 | -0.802926 | 4.45E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene71691 | 0.838699 | 2.46E-57 | -1.69E-46 |
| MS.gene052253 | MS.gene71691 | 0.802338 | 5.88E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene71691 | 0.829195 | 5.90E-55 | -1.69E-46 |
| MS.gene053169 | MS.gene71691 | 0.808798 | 2.59E-50 | -1.69E-46 |
| MS.gene053554 | MS.gene71691 | 0.842581 | 2.37E-58 | -1.69E-46 |
| MS.gene053555 | MS.gene71691 | 0.824883 | 6.34E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene71691 | 0.804269 | 2.34E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene71691 | 0.821065 | 4.92E-53 | -1.69E-46 |
| MS.gene054556 | MS.gene71691 | 0.824643 | 7.22E-54 | -1.69E-46 |
| MS.gene054719 | MS.gene71691 | 0.800618 | 1.32E-48 | -1.69E-46 |
| MS.gene054920 | MS.gene71691 | 0.812639 | 3.83E-51 | -1.69E-46 |
| MS.gene055369 | MS.gene71691 | 0.822709 | 2.05E-53 | -1.69E-46 |
| MS.gene055539 | MS.gene71691 | 0.820218 | 7.71E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene71691 | 0.816939 | 4.27E-52 | -1.69E-46 |
| MS.gene055741 | MS.gene71691 | 0.801357 | 9.35E-49 | -1.69E-46 |
| MS.gene055744 | MS.gene71691 | 0.805158 | 1.53E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene71691 | 0.813949 | 1.98E-51 | -1.69E-46 |
| MS.gene056659 | MS.gene71691 | 0.84724 | 1.31E-59 | -1.69E-46 |
| MS.gene056723 | MS.gene71691 | 0.865424 | 5.96E-65 | -1.69E-46 |
| MS.gene056902 | MS.gene71691 | 0.830608 | 2.67E-55 | -1.69E-46 |
| MS.gene057124 | MS.gene71691 | 0.814036 | 1.89E-51 | -1.69E-46 |
| MS.gene057396 | MS.gene71691 | 0.842326 | 2.77E-58 | -1.69E-46 |
| MS.gene057448 | MS.gene71691 | 0.817837 | 2.68E-52 | -1.69E-46 |
| MS.gene057449 | MS.gene71691 | 0.806735 | 7.12E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene71691 | 0.815877 | 7.38E-52 | -1.69E-46 |
| MS.gene057469 | MS.gene71691 | 0.801425 | 9.06E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene71691 | 0.807327 | 5.34E-50 | -1.69E-46 |
| MS.gene058090 | MS.gene71691 | 0.824306 | 8.67E-54 | -1.69E-46 |
| MS.gene058120 | MS.gene71691 | 0.817827 | 2.69E-52 | -1.69E-46 |
| MS.gene058142 | MS.gene71691 | 0.8039 | 2.80E-49 | -1.69E-46 |
| MS.gene058365 | MS.gene71691 | 0.824868 | 6.39E-54 | -1.69E-46 |
| MS.gene058700 | MS.gene71691 | 0.823015 | 1.74E-53 | -1.69E-46 |
| MS.gene058948 | MS.gene71691 | 0.851496 | 8.54E-61 | -1.69E-46 |
| MS.gene058949 | MS.gene71691 | 0.820449 | 6.82E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene71691 | 0.869158 | 3.82E-66 | -1.69E-46 |
| MS.gene059462 | MS.gene71691 | 0.80953 | 1.81E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene71691 | 0.80508 | 1.59E-49 | -1.69E-46 |
| MS.gene06090 | MS.gene71691 | 0.81302 | 3.16E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene71691 | 0.82471 | 6.97E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71691.t1 | MTR_1g107485 | 97.582 | 579 | 9 | 1 | 1 | 574 | 1 | 579 | 0.0 | 1135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71691.t1 | AT3G19490 | 77.853 | 587 | 106 | 5 | 1 | 574 | 1 | 576 | 0.0 | 844 |
| MS.gene71691.t1 | AT1G49810 | 76.850 | 419 | 93 | 3 | 140 | 556 | 1 | 417 | 0.0 | 657 |
Find 164 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAATCAGTTCACTATTT+TGG | 0.123960 | 1.1:+77186269 | None:intergenic |
| AAGGAGAAGGCGCGGGTTTC+GGG | 0.169550 | 1.1:+77188065 | None:intergenic |
| GTATTTGCGGCGGCTGCAAC+TGG | 0.213016 | 1.1:-77190237 | MS.gene71691:CDS |
| GGCGGATCCATGTTGGTTAT+TGG | 0.232127 | 1.1:-77186115 | MS.gene71691:CDS |
| AGCTGCTGGAGTTGCATTTA+TGG | 0.234796 | 1.1:-77186089 | MS.gene71691:CDS |
| GAAACCCGCGCCTTCTCCTT+TGG | 0.243497 | 1.1:-77188062 | MS.gene71691:CDS |
| AAAGGAGAAGGCGCGGGTTT+CGG | 0.264587 | 1.1:+77188064 | None:intergenic |
| ATGGCATTGCTATTTGTAAT+AGG | 0.267151 | 1.1:-77190045 | MS.gene71691:CDS |
| CTACGGAGTAACTTGGGATT+TGG | 0.274751 | 1.1:+77190749 | None:intergenic |
| GCAGGATTCTTCCGATGTTT+TGG | 0.281108 | 1.1:-77186793 | MS.gene71691:CDS |
| TGGAAAAGGTGGACTTCTTT+TGG | 0.286827 | 1.1:-77186063 | MS.gene71691:CDS |
| ATGGGGATGTTGCTTGGACT+TGG | 0.286994 | 1.1:-77186666 | MS.gene71691:CDS |
| CTTACTGATGCTATCCATTA+TGG | 0.287457 | 1.1:-77186630 | MS.gene71691:CDS |
| TATTGATGGCTGTAAGCTTA+TGG | 0.290928 | 1.1:-77189966 | MS.gene71691:CDS |
| TTGTTTGCACCGTAGTTATT+TGG | 0.299055 | 1.1:+77187238 | None:intergenic |
| TGCTTGGACTTGGGGTGCTT+TGG | 0.299729 | 1.1:-77186656 | MS.gene71691:CDS |
| GAAGAACCTGGAACTGTTGC+TGG | 0.303270 | 1.1:+77190672 | None:intergenic |
| TCCCTCAAGATTCTGAGTTC+TGG | 0.305561 | 1.1:-77186165 | MS.gene71691:CDS |
| TATGCAAATACTTCATTTGC+TGG | 0.307818 | 1.1:+77185474 | None:intergenic |
| TGGGGATGTTGCTTGGACTT+GGG | 0.313054 | 1.1:-77186665 | MS.gene71691:CDS |
| CAGTGGCAATTAACCATTCT+TGG | 0.318792 | 1.1:-77190212 | MS.gene71691:CDS |
| CGACATGACATGAGGATTAT+AGG | 0.323553 | 1.1:+77185550 | None:intergenic |
| AAACCCGCGCCTTCTCCTTT+GGG | 0.325238 | 1.1:-77188061 | MS.gene71691:CDS |
| TATGGGTGATACGGAGTATT+GGG | 0.330175 | 1.1:-77189948 | MS.gene71691:CDS |
| TTCTTGGGTTGCCGCAAATC+AGG | 0.342151 | 1.1:-77190196 | MS.gene71691:intron |
| GAAACAGCTATTTCAGTTGA+TGG | 0.343478 | 1.1:+77188210 | None:intergenic |
| GGAACCTCAGCTAGAGTTGT+AGG | 0.345612 | 1.1:+77185857 | None:intergenic |
| GCTGCTGGAGTTGCATTTAT+GGG | 0.350491 | 1.1:-77186088 | MS.gene71691:CDS |
| GCTTTGAGCAAATCAGTCTT+AGG | 0.354350 | 1.1:+77190267 | None:intergenic |
| AACTTCCCAGCAACAGTTCC+AGG | 0.359708 | 1.1:-77190678 | MS.gene71691:intron |
| TTGGTTATTGGCTCAGCTGC+TGG | 0.361717 | 1.1:-77186103 | MS.gene71691:CDS |
| TTAAGATTAATTCCTCTCAT+TGG | 0.362885 | 1.1:-77185592 | MS.gene71691:CDS |
| AGCATATCAGCTATGGGTTT+GGG | 0.370699 | 1.1:-77185664 | MS.gene71691:CDS |
| AGATTCTGAGTTCTGGCAAT+TGG | 0.375577 | 1.1:-77186158 | MS.gene71691:CDS |
| CCTGTGACGGCCTTGAACAC+TGG | 0.375804 | 1.1:+77186702 | None:intergenic |
| TGGAGGCAGCAGGTATTCTT+CGG | 0.383794 | 1.1:-77186321 | MS.gene71691:CDS |
| GATTCTGTTGACAGGATACT+TGG | 0.385727 | 1.1:-77187345 | MS.gene71691:intron |
| AAAAGATGAAGAAGCAAAGA+AGG | 0.386089 | 1.1:+77190799 | None:intergenic |
| AGGATTATAGGAACAATATC+CGG | 0.396020 | 1.1:+77185562 | None:intergenic |
| CCATGCATTGTAAGATTGAA+TGG | 0.402714 | 1.1:-77185615 | MS.gene71691:CDS |
| CACAGGTTTGCCTCCATACA+TGG | 0.404270 | 1.1:-77186685 | MS.gene71691:CDS |
| CATGTTGCAAATAATATCTC+AGG | 0.408121 | 1.1:+77185521 | None:intergenic |
| AGTTTGTGAGTTAGAATCTC+TGG | 0.411120 | 1.1:+77190697 | None:intergenic |
| CCATACATGGGGATGTTGCT+TGG | 0.413958 | 1.1:-77186672 | MS.gene71691:CDS |
| GAGCATATCAGCTATGGGTT+TGG | 0.414334 | 1.1:-77185665 | MS.gene71691:CDS |
| CTGTGACGGCCTTGAACACT+GGG | 0.422911 | 1.1:+77186703 | None:intergenic |
| ATTGATGGCTGTAAGCTTAT+GGG | 0.423937 | 1.1:-77189965 | MS.gene71691:CDS |
| TCCATTGGTTGCTGCAACAA+TGG | 0.429659 | 1.1:-77186209 | MS.gene71691:CDS |
| GGGGATGTTGCTTGGACTTG+GGG | 0.431405 | 1.1:-77186664 | MS.gene71691:CDS |
| GGAGGCAGCAGGTATTCTTC+GGG | 0.433449 | 1.1:-77186320 | MS.gene71691:CDS |
| CCAAGCAACATCCCCATGTA+TGG | 0.441256 | 1.1:+77186672 | None:intergenic |
| TACATTACTACGGAGTAACT+TGG | 0.441848 | 1.1:+77190742 | None:intergenic |
| GAACTGATTGCAAGTGCTAT+TGG | 0.447025 | 1.1:-77186259 | MS.gene71691:CDS |
| CTTCTGTTCAGTGAAGCTAA+TGG | 0.451539 | 1.1:-77186822 | MS.gene71691:intron |
| TGCATTTATGGGGATGGAAA+AGG | 0.452403 | 1.1:-77186077 | MS.gene71691:CDS |
| ACTTCTTGTAGAACTAGATT+CGG | 0.453085 | 1.1:-77190776 | MS.gene71691:CDS |
| AGTGGCAATTAACCATTCTT+GGG | 0.454731 | 1.1:-77190211 | MS.gene71691:CDS |
| CCATGACTATGGTGGATGTA+AGG | 0.459641 | 1.1:+77187634 | None:intergenic |
| GTTTAGAATTTCGTGAATGT+TGG | 0.461757 | 1.1:+77190849 | None:intergenic |
| CAGGATTTGACATCAGAATC+TGG | 0.464997 | 1.1:-77190354 | MS.gene71691:CDS |
| AAGTGGAGTAGGACTATTGA+TGG | 0.468184 | 1.1:-77189980 | MS.gene71691:CDS |
| ATTCCCTTTGTGCAGGTTAG+CGG | 0.473308 | 1.1:-77185950 | MS.gene71691:intron |
| CCATTCAATCTTACAATGCA+TGG | 0.475668 | 1.1:+77185615 | None:intergenic |
| GGTGGTGCATGGACTCCTAT+AGG | 0.479977 | 1.1:-77187294 | MS.gene71691:CDS |
| GTTACTCCGTAGTAATGTAT+TGG | 0.484163 | 1.1:-77190738 | MS.gene71691:CDS |
| AATTATAGACAATGTTCCAT+TGG | 0.484938 | 1.1:-77186224 | MS.gene71691:CDS |
| TATAGGGAGCATATCAGCTA+TGG | 0.485062 | 1.1:-77185671 | MS.gene71691:intron |
| GAATTCTATTATCTGTTAGC+AGG | 0.485936 | 1.1:-77186527 | MS.gene71691:intron |
| ACAACTATGCTGTGGATACA+TGG | 0.487424 | 1.1:-77187261 | MS.gene71691:CDS |
| CAAAGCGGTTGCGGTATTTG+CGG | 0.489171 | 1.1:-77190250 | MS.gene71691:CDS |
| TCGTTAGCATTCAACAAAAG+TGG | 0.497271 | 1.1:-77189997 | MS.gene71691:CDS |
| TAACAGATAATAGAATTCCT+AGG | 0.497522 | 1.1:+77186532 | None:intergenic |
| GCCAGAACTCAGAATCTTGA+GGG | 0.499442 | 1.1:+77186164 | None:intergenic |
| GAAATAGTGTTCTTCTTGCT+CGG | 0.499864 | 1.1:-77188156 | MS.gene71691:CDS |
| CAACAGAGAAACCATGACTA+TGG | 0.501393 | 1.1:+77187623 | None:intergenic |
| CCCATTGTTGCAGCAACCAA+TGG | 0.502260 | 1.1:+77186208 | None:intergenic |
| CCAGTGTTCAAGGCCGTCAC+AGG | 0.507480 | 1.1:-77186702 | MS.gene71691:CDS |
| GATTTGCGGCAACCCAAGAA+TGG | 0.509643 | 1.1:+77190199 | None:intergenic |
| TCCTCTCATTGGATTCGTCC+CGG | 0.512118 | 1.1:-77185581 | MS.gene71691:CDS |
| TGAAGCTAATGGCAAGGGGC+AGG | 0.514246 | 1.1:-77186811 | MS.gene71691:CDS |
| AAGTGCCACAAGCTCTATCA+AGG | 0.514255 | 1.1:-77186581 | MS.gene71691:CDS |
| TTTCAAGAACCAGAAAGAAA+AGG | 0.516576 | 1.1:+77185836 | None:intergenic |
| TGATTTGCTCAAAGCGGTTG+CGG | 0.516767 | 1.1:-77190259 | MS.gene71691:CDS |
| ATGCAAATACTTCATTTGCT+GGG | 0.517968 | 1.1:+77185475 | None:intergenic |
| TATTTGCGGCGGCTGCAACT+GGG | 0.518794 | 1.1:-77190236 | MS.gene71691:CDS |
| CCATTGGTTGCTGCAACAAT+GGG | 0.519864 | 1.1:-77186208 | MS.gene71691:CDS |
| CTATTTGTAATAGGATATGC+AGG | 0.520556 | 1.1:-77190036 | MS.gene71691:CDS |
| GTATTAACGGACCTGATTTG+CGG | 0.522410 | 1.1:+77190185 | None:intergenic |
| CAGCAAATGCGGGTGGTGCA+TGG | 0.522415 | 1.1:-77187305 | MS.gene71691:CDS |
| CTGTAAGCTTATGGGTGATA+CGG | 0.522786 | 1.1:-77189957 | MS.gene71691:CDS |
| GAACACTATTTCACTGACTT+CGG | 0.522901 | 1.1:+77188167 | None:intergenic |
| GAGTGGAACAGCTAGAGAAA+TGG | 0.525573 | 1.1:+77186967 | None:intergenic |
| GAGATAGTTGATGCTCATCA+AGG | 0.525860 | 1.1:-77188117 | MS.gene71691:CDS |
| CTCGCTGCAGGATCTTGCTA+TGG | 0.527644 | 1.1:-77190064 | MS.gene71691:intron |
| TTGTAGGGAGGGAAATGTTG+AGG | 0.528310 | 1.1:+77185873 | None:intergenic |
| CATAATGGATAGCATCAGTA+AGG | 0.532025 | 1.1:+77186631 | None:intergenic |
| TTATGGGTGATACGGAGTAT+TGG | 0.533464 | 1.1:-77189949 | MS.gene71691:CDS |
| AAAGATGAAGAAGCAAAGAA+GGG | 0.538832 | 1.1:+77190800 | None:intergenic |
| TTCAGTGAAGCTAATGGCAA+GGG | 0.538901 | 1.1:-77186816 | MS.gene71691:intron |
| TAGTCATGGTTTCTCTGTTG+CGG | 0.540142 | 1.1:-77187620 | MS.gene71691:CDS |
| AACTACGGTGCAAACAATGA+AGG | 0.541788 | 1.1:-77187232 | MS.gene71691:intron |
| ACATACTTTCGATACTCTGA+TGG | 0.546158 | 1.1:+77187585 | None:intergenic |
| GGCGGCTGCAACTGGGACAG+TGG | 0.550300 | 1.1:-77190229 | MS.gene71691:CDS |
| AAGAACCTGGAACTGTTGCT+GGG | 0.550421 | 1.1:+77190673 | None:intergenic |
| CCACCCAAAGGAGAAGGCGC+GGG | 0.562805 | 1.1:+77188058 | None:intergenic |
| CACTTACCACCCAAAGGAGA+AGG | 0.565161 | 1.1:+77188052 | None:intergenic |
| ATTATGGTGAATCTGAAAAG+AGG | 0.565293 | 1.1:-77186614 | MS.gene71691:CDS |
| TCAATCTTACAATGCATGGA+TGG | 0.566386 | 1.1:+77185619 | None:intergenic |
| GGATTATAGGAACAATATCC+GGG | 0.567554 | 1.1:+77185563 | None:intergenic |
| GAACCTCAGCTAGAGTTGTA+GGG | 0.569832 | 1.1:+77185858 | None:intergenic |
| GAGATATTATTTGCAACATG+AGG | 0.571301 | 1.1:-77185518 | MS.gene71691:CDS |
| GCATTCAACAAAAGTGGAGT+AGG | 0.573037 | 1.1:-77189991 | MS.gene71691:CDS |
| CCTCCCTACAACTCTAGCTG+AGG | 0.573285 | 1.1:-77185861 | MS.gene71691:CDS |
| AGCGGTTGCGGTATTTGCGG+CGG | 0.574217 | 1.1:-77190247 | MS.gene71691:CDS |
| ACATTACTACGGAGTAACTT+GGG | 0.575571 | 1.1:+77190743 | None:intergenic |
| GTTGTGGTAACATCGCCTAT+AGG | 0.578404 | 1.1:+77187279 | None:intergenic |
| GTCAAGGACATTAGAGCGAG+TGG | 0.578934 | 1.1:+77186950 | None:intergenic |
| CCCGCGCCTTCTCCTTTGGG+TGG | 0.580277 | 1.1:-77188058 | MS.gene71691:intron |
| CTGCTGGAGTTGCATTTATG+GGG | 0.582573 | 1.1:-77186087 | MS.gene71691:CDS |
| GAGAAAACAAGCTTTCCTCT+AGG | 0.582597 | 1.1:+77186753 | None:intergenic |
| GAGGTGAGATAAGCTCATCT+TGG | 0.584871 | 1.1:-77185642 | MS.gene71691:CDS |
| ACAGGTTTGCCTCCATACAT+GGG | 0.585649 | 1.1:-77186684 | MS.gene71691:CDS |
| TCTATCCTTGATAGAGCTTG+TGG | 0.586748 | 1.1:+77186576 | None:intergenic |
| GTTCAGTGAAGCTAATGGCA+AGG | 0.587779 | 1.1:-77186817 | MS.gene71691:intron |
| GTTTCATCAACTGAACATAG+AGG | 0.590290 | 1.1:+77190321 | None:intergenic |
| CCTTACATCCACCATAGTCA+TGG | 0.591496 | 1.1:-77187634 | MS.gene71691:CDS |
| TGCCAGAACTCAGAATCTTG+AGG | 0.596801 | 1.1:+77186163 | None:intergenic |
| TGGAGTTGCATTTATGGGGA+TGG | 0.598744 | 1.1:-77186083 | MS.gene71691:CDS |
| ACCACCCAAAGGAGAAGGCG+CGG | 0.609500 | 1.1:+77188057 | None:intergenic |
| CTCAGCTAGAGTTGTAGGGA+GGG | 0.610550 | 1.1:+77185862 | None:intergenic |
| GTATGGAGGCAAACCTGTGA+CGG | 0.612161 | 1.1:+77186689 | None:intergenic |
| ATAGGGAGCATATCAGCTAT+GGG | 0.614388 | 1.1:-77185670 | MS.gene71691:intron |
| ATGTATCCACAGCATAGTTG+TGG | 0.621110 | 1.1:+77187263 | None:intergenic |
| GATACATGGCCAAATAACTA+CGG | 0.625569 | 1.1:-77187247 | MS.gene71691:CDS |
| AGCAACATCCCCATGTATGG+AGG | 0.630580 | 1.1:+77186675 | None:intergenic |
| ATGTTGCAAATAATATCTCA+GGG | 0.632986 | 1.1:+77185522 | None:intergenic |
| TACTTTCGATACTCTGATGG+AGG | 0.633786 | 1.1:+77187588 | None:intergenic |
| CAGAGAAACCATGACTATGG+TGG | 0.633858 | 1.1:+77187626 | None:intergenic |
| CTATAATCCTCATGTCATGT+CGG | 0.634720 | 1.1:-77185549 | MS.gene71691:CDS |
| ATGTTACCACAACTATGCTG+TGG | 0.636567 | 1.1:-77187269 | MS.gene71691:CDS |
| GTTGTAATAGCAGCAAATGC+GGG | 0.638113 | 1.1:-77187315 | MS.gene71691:CDS |
| TCGCTCTAATGTCCTTGACT+AGG | 0.639693 | 1.1:-77186946 | MS.gene71691:intron |
| AGCATCAACTATCTCAACAA+TGG | 0.643212 | 1.1:+77188125 | None:intergenic |
| CTATCAAGGATAGACACTCA+AGG | 0.646522 | 1.1:-77186567 | MS.gene71691:CDS |
| ACAGCTAGAGAAATGGCTGA+AGG | 0.649150 | 1.1:+77186974 | None:intergenic |
| CCTCAGCTAGAGTTGTAGGG+AGG | 0.650975 | 1.1:+77185861 | None:intergenic |
| ATGGGTGATACGGAGTATTG+GGG | 0.651221 | 1.1:-77189947 | MS.gene71691:intron |
| ATTTATGGGGATGGAAAAGG+TGG | 0.651654 | 1.1:-77186074 | MS.gene71691:CDS |
| ATATCAGCTATGGGTTTGGG+AGG | 0.651782 | 1.1:-77185661 | MS.gene71691:CDS |
| CTGTTCAGATGCCAAAACAT+CGG | 0.656837 | 1.1:+77186782 | None:intergenic |
| GGGCATTCCGACATGACATG+AGG | 0.658867 | 1.1:+77185542 | None:intergenic |
| TCCGGGACGAATCCAATGAG+AGG | 0.661372 | 1.1:+77185580 | None:intergenic |
| CGCGTGCCAATACATTACTA+CGG | 0.664194 | 1.1:+77190732 | None:intergenic |
| TGAAAACACTTACCACCCAA+AGG | 0.665136 | 1.1:+77188046 | None:intergenic |
| AATACAATAGTACCTAGTCA+AGG | 0.667823 | 1.1:+77186934 | None:intergenic |
| TAAGACTGATTTGCTCAAAG+CGG | 0.669591 | 1.1:-77190265 | MS.gene71691:CDS |
| CAGGTTTGCCTCCATACATG+GGG | 0.671735 | 1.1:-77186683 | MS.gene71691:CDS |
| TGTTGTAATAGCAGCAAATG+CGG | 0.673128 | 1.1:-77187316 | MS.gene71691:CDS |
| TGGTACTGGCGGATCCATGT+TGG | 0.678869 | 1.1:-77186122 | MS.gene71691:CDS |
| AGCTGAGCCAATAACCAACA+TGG | 0.679374 | 1.1:+77186108 | None:intergenic |
| TCAGTGAAGCTAATGGCAAG+GGG | 0.693086 | 1.1:-77186815 | MS.gene71691:intron |
| TCTGAACAGATGGCTCCTAG+AGG | 0.698445 | 1.1:-77186768 | MS.gene71691:CDS |
| GTAATAGCAGCAAATGCGGG+TGG | 0.748761 | 1.1:-77187312 | MS.gene71691:CDS |
| GTTATGAACAGCTAAATACG+CGG | 0.773358 | 1.1:+77185895 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATAATTAACATTAATA+AGG | - | chr1.1:77186968-77186987 | MS.gene71691:CDS | 10.0% |
| !! | TGAGAAATAATAAATAAAAT+TGG | + | chr1.1:77188642-77188661 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTGTTTCAAAAAT+TGG | - | chr1.1:77187854-77187873 | MS.gene71691:intron | 10.0% |
| !!! | TATTTATTATTTCTCAATAA+CGG | - | chr1.1:77188646-77188665 | MS.gene71691:intron | 10.0% |
| !!! | TTAATTAAAGTTAGTTTATT+TGG | - | chr1.1:77187776-77187795 | MS.gene71691:intron | 10.0% |
| !! | AAACAAAAAAAATTAAATCG+CGG | + | chr1.1:77187847-77187866 | None:intergenic | 15.0% |
| !! | AAATAAAGAAAATGCAATTA+TGG | + | chr1.1:77189363-77189382 | None:intergenic | 15.0% |
| !! | ACATAACTTAATATATTGTA+AGG | - | chr1.1:77187205-77187224 | MS.gene71691:intron | 15.0% |
| !! | ATTACAATAGTAATCAAATT+TGG | - | chr1.1:77188430-77188449 | MS.gene71691:intron | 15.0% |
| !! | TTAGTTACTAATAATTAACA+GGG | - | chr1.1:77188034-77188053 | MS.gene71691:intron | 15.0% |
| !!! | AGTTTTTCTATTATAAAAGT+AGG | - | chr1.1:77187273-77187292 | MS.gene71691:CDS | 15.0% |
| !!! | CAATATATTAAGTTATGTTT+TGG | + | chr1.1:77187203-77187222 | None:intergenic | 15.0% |
| !!! | CATAATTTTGTAAATTATGA+AGG | + | chr1.1:77189522-77189541 | None:intergenic | 15.0% |
| !!! | TTAAAAACACAAAATTTTCA+AGG | + | chr1.1:77187823-77187842 | None:intergenic | 15.0% |
| !!! | TTTATATTTTAACTCTTGAT+TGG | - | chr1.1:77186463-77186482 | MS.gene71691:intron | 15.0% |
| !! | AATTATATCTAGTGAAAAGT+AGG | + | chr1.1:77190354-77190373 | None:intergenic | 20.0% |
| !! | AGCTATTATCATTTATTAAG+TGG | + | chr1.1:77188000-77188019 | None:intergenic | 20.0% |
| !! | ATGAAGGAAAAAAAATCTTT+AGG | + | chr1.1:77187336-77187355 | None:intergenic | 20.0% |
| !! | CATAATTTACAAAATTATGC+TGG | - | chr1.1:77189523-77189542 | MS.gene71691:intron | 20.0% |
| !! | CATTAATAAGGATTAGAATA+AGG | - | chr1.1:77186980-77186999 | MS.gene71691:CDS | 20.0% |
| !! | GATTGTATACAAAATATAAG+GGG | - | chr1.1:77188475-77188494 | MS.gene71691:intron | 20.0% |
| !! | GGATTGTATACAAAATATAA+GGG | - | chr1.1:77188474-77188493 | MS.gene71691:intron | 20.0% |
| !! | GTTAGTTACTAATAATTAAC+AGG | - | chr1.1:77188033-77188052 | MS.gene71691:intron | 20.0% |
| !! | TGGATTGTATACAAAATATA+AGG | - | chr1.1:77188473-77188492 | MS.gene71691:intron | 20.0% |
| !! | TTACATAATACAATGAGTAT+AGG | - | chr1.1:77187229-77187248 | MS.gene71691:intron | 20.0% |
| !!! | ATACTTTGATAACCATAAAA+AGG | + | chr1.1:77187668-77187687 | None:intergenic | 20.0% |
| !!! | ATATGATTTATTCTGAAAGT+TGG | - | chr1.1:77186270-77186289 | MS.gene71691:CDS | 20.0% |
| !!! | ATTGCATTTTCTTTATTTTC+AGG | - | chr1.1:77189365-77189384 | MS.gene71691:intron | 20.0% |
| !!! | CTTTGCATATTGAATTTTTT+TGG | - | chr1.1:77188401-77188420 | MS.gene71691:intron | 20.0% |
| !!! | GTAGAAAAAATGGTATATTT+TGG | - | chr1.1:77186632-77186651 | MS.gene71691:CDS | 20.0% |
| !!! | TATAAAATACCACAATGTTT+TGG | - | chr1.1:77187911-77187930 | MS.gene71691:intron | 20.0% |
| !!! | TTGAAATTTATGGTAATGTT+TGG | - | chr1.1:77186520-77186539 | MS.gene71691:intron | 20.0% |
| !!! | TTGCATTTTCTTTATTTTCA+GGG | - | chr1.1:77189366-77189385 | MS.gene71691:intron | 20.0% |
| !!! | TTGTGCTATTTTAGAAAATA+TGG | + | chr1.1:77188874-77188893 | None:intergenic | 20.0% |
| ! | AAAGAAGCAGAAGAATTAAA+AGG | + | chr1.1:77185757-77185776 | None:intergenic | 25.0% |
| ! | AACTACTCAGTAATTTATAG+TGG | - | chr1.1:77189228-77189247 | MS.gene71691:intron | 25.0% |
| ! | AAGAAGCAGAAGAATTAAAA+GGG | + | chr1.1:77185756-77185775 | None:intergenic | 25.0% |
| ! | AATTATAGACAATGTTCCAT+TGG | - | chr1.1:77190149-77190168 | MS.gene71691:intron | 25.0% |
| ! | ACATTGCATACAAATTGAAA+AGG | - | chr1.1:77187169-77187188 | MS.gene71691:intron | 25.0% |
| ! | ACTATATCAAGAGAATATTC+CGG | + | chr1.1:77189289-77189308 | None:intergenic | 25.0% |
| ! | ATAAATTACTGAGTAGTTTC+AGG | + | chr1.1:77189226-77189245 | None:intergenic | 25.0% |
| ! | ATGACAAAAATCATAACCTA+TGG | + | chr1.1:77190651-77190670 | None:intergenic | 25.0% |
| ! | ATGTTGCAAATAATATCTCA+GGG | + | chr1.1:77190854-77190873 | None:intergenic | 25.0% |
| ! | ATTTATTAAGTGGTGTGTTA+TGG | + | chr1.1:77187990-77188009 | None:intergenic | 25.0% |
| ! | CAAATTAAAATTGCATATGC+AGG | - | chr1.1:77188676-77188695 | MS.gene71691:intron | 25.0% |
| ! | CATTGCATACAAATTGAAAA+GGG | - | chr1.1:77187170-77187189 | MS.gene71691:intron | 25.0% |
| ! | CTAAAATAGCACAATAATGA+TGG | - | chr1.1:77188880-77188899 | MS.gene71691:intron | 25.0% |
| ! | CTATTACATAAAGTGGAATT+CGG | + | chr1.1:77187120-77187139 | None:intergenic | 25.0% |
| ! | CTATTAGTGCTTATAATTAG+TGG | - | chr1.1:77188994-77189013 | MS.gene71691:intron | 25.0% |
| ! | TAACAGATAATAGAATTCCT+AGG | + | chr1.1:77189844-77189863 | None:intergenic | 25.0% |
| ! | TAATTATAAGCACTAATAGC+AGG | + | chr1.1:77188993-77189012 | None:intergenic | 25.0% |
| ! | TACTGTCAAAATAAAGTCTA+TGG | - | chr1.1:77186876-77186895 | MS.gene71691:intron | 25.0% |
| ! | TAGAAGATATCCCATTATTT+GGG | - | chr1.1:77186811-77186830 | MS.gene71691:CDS | 25.0% |
| ! | TTAAGATTAATTCCTCTCAT+TGG | - | chr1.1:77190781-77190800 | MS.gene71691:CDS | 25.0% |
| ! | TTATAAAAGTAGGTCATGTT+TGG | - | chr1.1:77187283-77187302 | MS.gene71691:CDS | 25.0% |
| ! | TTTATTAAGTGGTGTGTTAT+GGG | + | chr1.1:77187989-77188008 | None:intergenic | 25.0% |
| !! | CAATAAAGAAGACCTTTTTA+TGG | - | chr1.1:77187653-77187672 | MS.gene71691:CDS | 25.0% |
| !! | CTTTTTGTCTAAAAATGCAT+AGG | - | chr1.1:77186740-77186759 | MS.gene71691:CDS | 25.0% |
| !! | GAAGTGAAATAAGGTATTAA+CGG | + | chr1.1:77186204-77186223 | None:intergenic | 25.0% |
| !! | GTATATTTTTCTGTTCTCTT+TGG | + | chr1.1:77186677-77186696 | None:intergenic | 25.0% |
| !! | TATGGTAATGTTTGGAAAAT+GGG | - | chr1.1:77186528-77186547 | MS.gene71691:CDS | 25.0% |
| !! | TTAATACCTTATTTCACTTC+TGG | - | chr1.1:77186204-77186223 | MS.gene71691:CDS | 25.0% |
| !! | TTATGGTAATGTTTGGAAAA+TGG | - | chr1.1:77186527-77186546 | MS.gene71691:intron | 25.0% |
| !! | TTCTCTTTTTCTTTTTGTTG+AGG | - | chr1.1:77186921-77186940 | MS.gene71691:intron | 25.0% |
| !!! | AATTGTTTTTGCAATCGAAA+CGG | - | chr1.1:77190013-77190032 | MS.gene71691:CDS | 25.0% |
| !!! | CTTCTTTTGGTACTTTAAAA+AGG | - | chr1.1:77190323-77190342 | MS.gene71691:CDS | 25.0% |
| !!! | CTTGATTGCTTTGAAATTTA+TGG | - | chr1.1:77186510-77186529 | MS.gene71691:intron | 25.0% |
| !!! | TACATTTTTCATTTTGACCA+AGG | + | chr1.1:77189339-77189358 | None:intergenic | 25.0% |
| !!! | TTGTTTTTTTTTATGCTGCT+TGG | - | chr1.1:77185788-77185807 | MS.gene71691:intron | 25.0% |
| AAAACTACATGTTCTGTTAC+TGG | + | chr1.1:77187553-77187572 | None:intergenic | 30.0% | |
| AAAAGATGAAGAAGCAAAGA+AGG | + | chr1.1:77185577-77185596 | None:intergenic | 30.0% | |
| AAACAACCAGAAGTGAAATA+AGG | + | chr1.1:77186213-77186232 | None:intergenic | 30.0% | |
| AAACAATGAAGGTTATCTCT+TGG | - | chr1.1:77189152-77189171 | MS.gene71691:intron | 30.0% | |
| AAAGATGAAGAAGCAAAGAA+GGG | + | chr1.1:77185576-77185595 | None:intergenic | 30.0% | |
| AAGAATCGAATCCCAAATAA+TGG | + | chr1.1:77186825-77186844 | None:intergenic | 30.0% | |
| AATAATTAACAGGGATTGCT+TGG | - | chr1.1:77188043-77188062 | MS.gene71691:intron | 30.0% | |
| AATACAATAGTACCTAGTCA+AGG | + | chr1.1:77189442-77189461 | None:intergenic | 30.0% | |
| ACATAAGTTTACGATTTCCT+TGG | - | chr1.1:77189319-77189338 | MS.gene71691:intron | 30.0% | |
| ACTATTCAAATCAGCATTCT+TGG | + | chr1.1:77189476-77189495 | None:intergenic | 30.0% | |
| ACTTATCTTCCAAAACATTG+TGG | + | chr1.1:77187923-77187942 | None:intergenic | 30.0% | |
| ACTTCTTGTAGAACTAGATT+CGG | - | chr1.1:77185597-77185616 | MS.gene71691:CDS | 30.0% | |
| AGAATCGAATCCCAAATAAT+GGG | + | chr1.1:77186824-77186843 | None:intergenic | 30.0% | |
| AGGATTATAGGAACAATATC+CGG | + | chr1.1:77190814-77190833 | None:intergenic | 30.0% | |
| ATAATTAGTGGAAGTTGCTT+TGG | - | chr1.1:77189006-77189025 | MS.gene71691:intron | 30.0% | |
| ATGCATAGTAGAGTAAAACA+GGG | - | chr1.1:77186602-77186621 | MS.gene71691:CDS | 30.0% | |
| ATGTACTGTACGTATGTATA+GGG | - | chr1.1:77190686-77190705 | MS.gene71691:CDS | 30.0% | |
| ATTATGGTGAATCTGAAAAG+AGG | - | chr1.1:77189759-77189778 | MS.gene71691:intron | 30.0% | |
| CATGTTGCAAATAATATCTC+AGG | + | chr1.1:77190855-77190874 | None:intergenic | 30.0% | |
| CTAGTAAGAATACAAGATCA+AGG | - | chr1.1:77185896-77185915 | MS.gene71691:CDS | 30.0% | |
| CTATATCAAGAGAATATTCC+GGG | + | chr1.1:77189288-77189307 | None:intergenic | 30.0% | |
| CTATTTGTAATAGGATATGC+AGG | - | chr1.1:77186337-77186356 | MS.gene71691:intron | 30.0% | |
| CTTTAGTACTGCTATTACAA+AGG | - | chr1.1:77185953-77185972 | MS.gene71691:intron | 30.0% | |
| GAATAAAATTAGTCAGGCTA+AGG | + | chr1.1:77188971-77188990 | None:intergenic | 30.0% | |
| GAATTCTATTATCTGTTAGC+AGG | - | chr1.1:77189846-77189865 | MS.gene71691:intron | 30.0% | |
| GAGATATTATTTGCAACATG+AGG | - | chr1.1:77190855-77190874 | MS.gene71691:CDS | 30.0% | |
| GTAGAAGATATCCCATTATT+TGG | - | chr1.1:77186810-77186829 | MS.gene71691:CDS | 30.0% | |
| TAACAACATATTATGCGCAT+TGG | + | chr1.1:77187893-77187912 | None:intergenic | 30.0% | |
| TAGCAGGAATAAAATTAGTC+AGG | + | chr1.1:77188977-77188996 | None:intergenic | 30.0% | |
| TATATCAAGAGAATATTCCG+GGG | + | chr1.1:77189287-77189306 | None:intergenic | 30.0% | |
| TATGCATAGTAGAGTAAAAC+AGG | - | chr1.1:77186601-77186620 | MS.gene71691:CDS | 30.0% | |
| TATGTACTGTACGTATGTAT+AGG | - | chr1.1:77190685-77190704 | MS.gene71691:CDS | 30.0% | |
| TGAATCAGTGTTATGAATAG+TGG | - | chr1.1:77187074-77187093 | MS.gene71691:intron | 30.0% | |
| TTAAAATTGCATATGCAGGT+TGG | - | chr1.1:77188680-77188699 | MS.gene71691:intron | 30.0% | |
| TTAGTAACTAACAGATCAGT+TGG | + | chr1.1:77188025-77188044 | None:intergenic | 30.0% | |
| TTATCTGTTAGCAGGTAATA+AGG | - | chr1.1:77189854-77189873 | MS.gene71691:intron | 30.0% | |
| TTATTGTCGCAAACAAAAGA+TGG | + | chr1.1:77187639-77187658 | None:intergenic | 30.0% | |
| TTTCAAGAACCAGAAAGAAA+AGG | + | chr1.1:77190540-77190559 | None:intergenic | 30.0% | |
| ! | AAAAAGAAAAAGAGAAGTGC+TGG | + | chr1.1:77186917-77186936 | None:intergenic | 30.0% |
| ! | AAATGCTAAGGGGTTAATTT+TGG | - | chr1.1:77185993-77186012 | MS.gene71691:intron | 30.0% |
| ! | AACAAGTTCACAAGATTTTG+AGG | - | chr1.1:77186072-77186091 | MS.gene71691:CDS | 30.0% |
| ! | AGGTAAACTGTTGTTTAGTT+TGG | + | chr1.1:77187803-77187822 | None:intergenic | 30.0% |
| ! | ATGATTTTTGTCATGACAAG+AGG | - | chr1.1:77190657-77190676 | MS.gene71691:intron | 30.0% |
| ! | ATTTGCTACTGAAATGCTAA+GGG | - | chr1.1:77185982-77186001 | MS.gene71691:intron | 30.0% |
| ! | CTAACCACTATCAAGTTTTA+AGG | - | chr1.1:77185727-77185746 | MS.gene71691:intron | 30.0% |
| ! | GTTTAGAATTTCGTGAATGT+TGG | + | chr1.1:77185527-77185546 | None:intergenic | 30.0% |
| ! | TCTTTTCAGATTCACCATAA+TGG | + | chr1.1:77189760-77189779 | None:intergenic | 30.0% |
| ! | TTGCAATCAGTTCACTATTT+TGG | + | chr1.1:77190107-77190126 | None:intergenic | 30.0% |
| !! | AATTTGCTACTGAAATGCTA+AGG | - | chr1.1:77185981-77186000 | MS.gene71691:intron | 30.0% |
| !! | AGCACAATAATGATGGATAT+GGG | - | chr1.1:77188887-77188906 | MS.gene71691:intron | 30.0% |
| !! | ATGGCATTGCTATTTGTAAT+AGG | - | chr1.1:77186328-77186347 | MS.gene71691:intron | 30.0% |
| !! | TAGCACAATAATGATGGATA+TGG | - | chr1.1:77188886-77188905 | MS.gene71691:intron | 30.0% |
| !!! | ATTTTTTCTCAGTTCAGTTC+TGG | - | chr1.1:77188712-77188731 | MS.gene71691:intron | 30.0% |
| !!! | GGTATCATTTTTCTGAGATT+GGG | - | chr1.1:77187509-77187528 | MS.gene71691:intron | 30.0% |
| !!! | GTATCATTTTTCTGAGATTG+GGG | - | chr1.1:77187510-77187529 | MS.gene71691:intron | 30.0% |
| ACAAAGGGAATAAACGACAT+CGG | + | chr1.1:77190414-77190433 | None:intergenic | 35.0% | |
| ACATACTTTCGATACTCTGA+TGG | + | chr1.1:77188791-77188810 | None:intergenic | 35.0% | |
| ACATTACTACGGAGTAACTT+GGG | + | chr1.1:77185633-77185652 | None:intergenic | 35.0% | |
| ACCATACTAAGAATGCTTCT+TGG | - | chr1.1:77188372-77188391 | MS.gene71691:intron | 35.0% | |
| AGCATCAACTATCTCAACAA+TGG | + | chr1.1:77188251-77188270 | None:intergenic | 35.0% | |
| AGCCTACATACAAATGATTG+AGG | + | chr1.1:77188143-77188162 | None:intergenic | 35.0% | |
| AGTGGCAATTAACCATTCTT+GGG | - | chr1.1:77186162-77186181 | MS.gene71691:CDS | 35.0% | |
| AGTTTGTGAGTTAGAATCTC+TGG | + | chr1.1:77185679-77185698 | None:intergenic | 35.0% | |
| ATACAAAATATAAGGGGCTC+AGG | - | chr1.1:77188481-77188500 | MS.gene71691:intron | 35.0% | |
| ATCACAATTTCATGCGTGAA+CGG | - | chr1.1:77187472-77187491 | MS.gene71691:intron | 35.0% | |
| ATCAGAATAGATGAATCAGG+TGG | + | chr1.1:77186783-77186802 | None:intergenic | 35.0% | |
| ATTTATGCTAGCTGATGTAG+CGG | + | chr1.1:77187361-77187380 | None:intergenic | 35.0% | |
| CACATCAGAATAGATGAATC+AGG | + | chr1.1:77186786-77186805 | None:intergenic | 35.0% | |
| CATACAAATTGAAAAGGGAG+TGG | - | chr1.1:77187175-77187194 | MS.gene71691:intron | 35.0% | |
| CATGGAATTATGTCATGTCA+GGG | + | chr1.1:77189977-77189996 | None:intergenic | 35.0% | |
| CCATGCATTGTAAGATTGAA+TGG | - | chr1.1:77190758-77190777 | MS.gene71691:CDS | 35.0% | |
| CCATTCAATCTTACAATGCA+TGG | + | chr1.1:77190761-77190780 | None:intergenic | 35.0% | |
| CTACATCAGCTAGCATAAAT+TGG | - | chr1.1:77187361-77187380 | MS.gene71691:intron | 35.0% | |
| CTATAATCCTCATGTCATGT+CGG | - | chr1.1:77190824-77190843 | MS.gene71691:CDS | 35.0% | |
| CTTACTGATGCTATCCATTA+TGG | - | chr1.1:77189743-77189762 | MS.gene71691:intron | 35.0% | |
| GAAATAGTGTTCTTCTTGCT+CGG | - | chr1.1:77188217-77188236 | MS.gene71691:intron | 35.0% | |
| GAGACAATAAATGCAAGATC+AGG | + | chr1.1:77187950-77187969 | None:intergenic | 35.0% | |
| GATACATGGCCAAATAACTA+CGG | - | chr1.1:77189126-77189145 | MS.gene71691:intron | 35.0% | |
| GCAACCTTAAAACTTGATAG+TGG | + | chr1.1:77185734-77185753 | None:intergenic | 35.0% | |
| GCCTACATACAAATGATTGA+GGG | + | chr1.1:77188142-77188161 | None:intergenic | 35.0% | |
| GCTTGCACTATTACATAAAG+TGG | + | chr1.1:77187127-77187146 | None:intergenic | 35.0% | |
| GGATTATAGGAACAATATCC+GGG | + | chr1.1:77190813-77190832 | None:intergenic | 35.0% | |
| GGGGTAAAAGGTAGAAAAAA+TGG | - | chr1.1:77186622-77186641 | MS.gene71691:CDS | 35.0% | |
| GTGAACGGACATTAACTATA+CGG | - | chr1.1:77187487-77187506 | MS.gene71691:intron | 35.0% | |
| GTTACTCCGTAGTAATGTAT+TGG | - | chr1.1:77185635-77185654 | MS.gene71691:CDS | 35.0% | |
| GTTATGAACAGCTAAATACG+CGG | + | chr1.1:77190481-77190500 | None:intergenic | 35.0% | |
| GTTATGGGATACCAATACTA+GGG | + | chr1.1:77187974-77187993 | None:intergenic | 35.0% | |
| GTTTCATCAACTGAACATAG+AGG | + | chr1.1:77186055-77186074 | None:intergenic | 35.0% | |
| TAATGAGAGAAGATACAACG+AGG | + | chr1.1:77188081-77188100 | None:intergenic | 35.0% | |
| TACATTACTACGGAGTAACT+TGG | + | chr1.1:77185634-77185653 | None:intergenic | 35.0% | |
| TAGAGTAAAACAGGGGTAAA+AGG | - | chr1.1:77186610-77186629 | MS.gene71691:CDS | 35.0% | |
| TCAATCTTACAATGCATGGA+TGG | + | chr1.1:77190757-77190776 | None:intergenic | 35.0% | |
| TCCAAATAGACGTATCACAA+TGG | + | chr1.1:77189187-77189206 | None:intergenic | 35.0% | |
| TCCATTGTGATACGTCTATT+TGG | - | chr1.1:77189183-77189202 | MS.gene71691:intron | 35.0% | |
| TCCCTCAATCATTTGTATGT+AGG | - | chr1.1:77188138-77188157 | MS.gene71691:CDS | 35.0% | |
| TCGAATGTACACATGCAATT+GGG | + | chr1.1:77188106-77188125 | None:intergenic | 35.0% | |
| TCGTTAGCATTCAACAAAAG+TGG | - | chr1.1:77186376-77186395 | MS.gene71691:intron | 35.0% | |
| TGAAACAGCTCAACTTTCTT+TGG | - | chr1.1:77187701-77187720 | MS.gene71691:intron | 35.0% | |
| TGAACGGACATTAACTATAC+GGG | - | chr1.1:77187488-77187507 | MS.gene71691:intron | 35.0% | |
| TGCATAGTAGAGTAAAACAG+GGG | - | chr1.1:77186603-77186622 | MS.gene71691:CDS | 35.0% | |
| TGTTATGGGATACCAATACT+AGG | + | chr1.1:77187975-77187994 | None:intergenic | 35.0% | |
| TGTTGTAATAGCAGCAAATG+CGG | - | chr1.1:77189057-77189076 | MS.gene71691:intron | 35.0% | |
| TTATTGTCTCTCCCTAGTAT+TGG | - | chr1.1:77187960-77187979 | MS.gene71691:intron | 35.0% | |
| TTCGAATGTACACATGCAAT+TGG | + | chr1.1:77188107-77188126 | None:intergenic | 35.0% | |
| TTGGCATGTTATGGCTTAAA+GGG | - | chr1.1:77185807-77185826 | MS.gene71691:intron | 35.0% | |
| TTGTTTGCACCGTAGTTATT+TGG | + | chr1.1:77189138-77189157 | None:intergenic | 35.0% | |
| TTTGCTACTGAAATGCTAAG+GGG | - | chr1.1:77185983-77186002 | MS.gene71691:intron | 35.0% | |
| ! | AACATATTATGCGCATTGGT+AGG | + | chr1.1:77187889-77187908 | None:intergenic | 35.0% |
| ! | AGTCAACATTTTGAATGCAG+TGG | + | chr1.1:77187026-77187045 | None:intergenic | 35.0% |
| ! | ATTGATGGCTGTAAGCTTAT+GGG | - | chr1.1:77186408-77186427 | MS.gene71691:intron | 35.0% |
| ! | CATTTTGAATGCAGTGGTAT+CGG | + | chr1.1:77187020-77187039 | None:intergenic | 35.0% |
| ! | CTTGATTGGTTAGAGCTATA+TGG | - | chr1.1:77186477-77186496 | MS.gene71691:intron | 35.0% |
| ! | GAAACAGCTATTTCAGTTGA+TGG | + | chr1.1:77188166-77188185 | None:intergenic | 35.0% |
| ! | TATTGATGGCTGTAAGCTTA+TGG | - | chr1.1:77186407-77186426 | MS.gene71691:intron | 35.0% |
| ! | TGTCTCGTGTTACTAACTTT+CGG | - | chr1.1:77188810-77188829 | MS.gene71691:intron | 35.0% |
| ! | TTTTCCATCGCAGTGATTTT+AGG | - | chr1.1:77189891-77189910 | MS.gene71691:intron | 35.0% |
| !! | AAGGGGTTAATTTTGGTAAC+AGG | - | chr1.1:77186000-77186019 | MS.gene71691:intron | 35.0% |
| !! | ATAGTGGATTGTGGAAATAG+CGG | - | chr1.1:77187090-77187109 | MS.gene71691:intron | 35.0% |
| !! | CATAATGGATAGCATCAGTA+AGG | + | chr1.1:77189745-77189764 | None:intergenic | 35.0% |
| !! | CTGAGACTTTAAAACACATG+TGG | + | chr1.1:77189924-77189943 | None:intergenic | 35.0% |
| !! | GAACACTATTTCACTGACTT+CGG | + | chr1.1:77188209-77188228 | None:intergenic | 35.0% |
| !! | GTGGTGTTATCAAGCTATAA+AGG | + | chr1.1:77188947-77188966 | None:intergenic | 35.0% |
| !! | GTGTTATGAATAGTGGATTG+TGG | - | chr1.1:77187081-77187100 | MS.gene71691:intron | 35.0% |
| !! | GTTGTCAAGTAGAAGCATTA+GGG | + | chr1.1:77187443-77187462 | None:intergenic | 35.0% |
| !! | TAAGACTGATTTGCTCAAAG+CGG | - | chr1.1:77186108-77186127 | MS.gene71691:CDS | 35.0% |
| !! | TGTTGTCAAGTAGAAGCATT+AGG | + | chr1.1:77187444-77187463 | None:intergenic | 35.0% |
| !!! | CAAGGAGCATTATTTTTCCT+AGG | - | chr1.1:77189824-77189843 | MS.gene71691:intron | 35.0% |
| !!! | GGGTATCATTTTTCTGAGAT+TGG | - | chr1.1:77187508-77187527 | MS.gene71691:intron | 35.0% |
| !!! | GTTTCGGGTTTTGATATTGT+CGG | + | chr1.1:77188296-77188315 | None:intergenic | 35.0% |
| AAATTAGTCAGGCTAAGGAG+TGG | + | chr1.1:77188966-77188985 | None:intergenic | 40.0% | |
| AACTACGGTGCAAACAATGA+AGG | - | chr1.1:77189141-77189160 | MS.gene71691:intron | 40.0% | |
| AAGAGCTCCTTCTTACAACA+AGG | - | chr1.1:77188507-77188526 | MS.gene71691:intron | 40.0% | |
| AAGTGGAGTAGGACTATTGA+TGG | - | chr1.1:77186393-77186412 | MS.gene71691:intron | 40.0% | |
| ACAACAAGGTGTAACCACTT+TGG | - | chr1.1:77188521-77188540 | MS.gene71691:intron | 40.0% | |
| ACAACTATGCTGTGGATACA+TGG | - | chr1.1:77189112-77189131 | MS.gene71691:intron | 40.0% | |
| AGCATATCAGCTATGGGTTT+GGG | - | chr1.1:77190709-77190728 | MS.gene71691:CDS | 40.0% | |
| AGTGGTTAGAAAGAAGAACC+TGG | + | chr1.1:77185716-77185735 | None:intergenic | 40.0% | |
| ATGTATCCACAGCATAGTTG+TGG | + | chr1.1:77189113-77189132 | None:intergenic | 40.0% | |
| ATGTTACCACAACTATGCTG+TGG | - | chr1.1:77189104-77189123 | MS.gene71691:intron | 40.0% | |
| ATTCAAACTGAATGCTGCCA+GGG | + | chr1.1:77187059-77187078 | None:intergenic | 40.0% | |
| ATTTATGGGGATGGAAAAGG+TGG | - | chr1.1:77190299-77190318 | MS.gene71691:CDS | 40.0% | |
| CAAACAAAAGATGGAGGCAA+AGG | + | chr1.1:77187630-77187649 | None:intergenic | 40.0% | |
| CAACAGAGAAACCATGACTA+TGG | + | chr1.1:77188753-77188772 | None:intergenic | 40.0% | |
| CAATCCTAGTTTCGCTACTA+CGG | + | chr1.1:77187404-77187423 | None:intergenic | 40.0% | |
| CAGGATTTGACATCAGAATC+TGG | - | chr1.1:77186019-77186038 | MS.gene71691:intron | 40.0% | |
| CAGTGGCAATTAACCATTCT+TGG | - | chr1.1:77186161-77186180 | MS.gene71691:CDS | 40.0% | |
| CCATGGAATTATGTCATGTC+AGG | + | chr1.1:77189978-77189997 | None:intergenic | 40.0% | |
| CCTGACATGACATAATTCCA+TGG | - | chr1.1:77189975-77189994 | MS.gene71691:CDS | 40.0% | |
| CGACATGACATGAGGATTAT+AGG | + | chr1.1:77190826-77190845 | None:intergenic | 40.0% | |
| CTATCAAGGATAGACACTCA+AGG | - | chr1.1:77189806-77189825 | MS.gene71691:intron | 40.0% | |
| CTGTAAGCTTATGGGTGATA+CGG | - | chr1.1:77186416-77186435 | MS.gene71691:intron | 40.0% | |
| CTGTTCAGATGCCAAAACAT+CGG | + | chr1.1:77189594-77189613 | None:intergenic | 40.0% | |
| CTTCTGTTCAGTGAAGCTAA+TGG | - | chr1.1:77189551-77189570 | MS.gene71691:intron | 40.0% | |
| CTTGGCATGTTATGGCTTAA+AGG | - | chr1.1:77185806-77185825 | MS.gene71691:intron | 40.0% | |
| GAACTGATTGCAAGTGCTAT+TGG | - | chr1.1:77190114-77190133 | MS.gene71691:intron | 40.0% | |
| GAATTATGTCATGTCAGGGA+AGG | + | chr1.1:77189973-77189992 | None:intergenic | 40.0% | |
| GAGAAAACAAGCTTTCCTCT+AGG | + | chr1.1:77189623-77189642 | None:intergenic | 40.0% | |
| GATTCTGTTGACAGGATACT+TGG | - | chr1.1:77189028-77189047 | MS.gene71691:intron | 40.0% | |
| GCATTCAACAAAAGTGGAGT+AGG | - | chr1.1:77186382-77186401 | MS.gene71691:intron | 40.0% | |
| GGGAATTCATGCATCACATA+CGG | - | chr1.1:77188907-77188926 | MS.gene71691:intron | 40.0% | |
| GTTGTAATAGCAGCAAATGC+GGG | - | chr1.1:77189058-77189077 | MS.gene71691:intron | 40.0% | |
| TAATAGTGCAAGCAGCATAG+CGG | - | chr1.1:77187134-77187153 | MS.gene71691:intron | 40.0% | |
| TACTTTCGATACTCTGATGG+AGG | + | chr1.1:77188788-77188807 | None:intergenic | 40.0% | |
| TAGTCATGGTTTCTCTGTTG+CGG | - | chr1.1:77188753-77188772 | MS.gene71691:intron | 40.0% | |
| TCACATACGGTTTCAGTCAT+TGG | - | chr1.1:77188920-77188939 | MS.gene71691:intron | 40.0% | |
| TCATTTATGCACAGCCAAAG+TGG | + | chr1.1:77188538-77188557 | None:intergenic | 40.0% | |
| TCTATCCTTGATAGAGCTTG+TGG | + | chr1.1:77189800-77189819 | None:intergenic | 40.0% | |
| TGAAAACACTTACCACCCAA+AGG | + | chr1.1:77188330-77188349 | None:intergenic | 40.0% | |
| TGCATTTATGGGGATGGAAA+AGG | - | chr1.1:77190296-77190315 | MS.gene71691:CDS | 40.0% | |
| TTAGTCAACATGAGTAGCCA+TGG | + | chr1.1:77189995-77190014 | None:intergenic | 40.0% | |
| TTATGGGTGATACGGAGTAT+TGG | - | chr1.1:77186424-77186443 | MS.gene71691:intron | 40.0% | |
| TTCAGACTTCATTTGAGTCG+TGG | - | chr1.1:77190567-77190586 | MS.gene71691:intron | 40.0% | |
| TTCAGTGAAGCTAATGGCAA+GGG | - | chr1.1:77189557-77189576 | MS.gene71691:intron | 40.0% | |
| TTGTCCTAAAATCACTGCGA+TGG | + | chr1.1:77189898-77189917 | None:intergenic | 40.0% | |
| TTGTCGCAAACAAAAGATGG+AGG | + | chr1.1:77187636-77187655 | None:intergenic | 40.0% | |
| ! | AAAAGCATGACAATGAGCAC+TGG | + | chr1.1:77186702-77186721 | None:intergenic | 40.0% |
| ! | AGATTCTGAGTTCTGGCAAT+TGG | - | chr1.1:77190215-77190234 | MS.gene71691:CDS | 40.0% |
| ! | ATAGGGAGCATATCAGCTAT+GGG | - | chr1.1:77190703-77190722 | MS.gene71691:CDS | 40.0% |
| ! | ATATTATGCGCATTGGTAGG+CGG | + | chr1.1:77187886-77187905 | None:intergenic | 40.0% |
| ! | CAATTGGTTGCATTTTGTGC+TGG | - | chr1.1:77190231-77190250 | MS.gene71691:CDS | 40.0% |
| ! | GAGATAGTTGATGCTCATCA+AGG | - | chr1.1:77188256-77188275 | MS.gene71691:intron | 40.0% |
| ! | GATTTTTGTCCCAGTGTTCA+AGG | - | chr1.1:77189661-77189680 | MS.gene71691:intron | 40.0% |
| ! | GCTTTGAGCAAATCAGTCTT+AGG | + | chr1.1:77186109-77186128 | None:intergenic | 40.0% |
| ! | GGTTACACCTTGTTGTAAGA+AGG | + | chr1.1:77188517-77188536 | None:intergenic | 40.0% |
| ! | GTATTAACGGACCTGATTTG+CGG | + | chr1.1:77186191-77186210 | None:intergenic | 40.0% |
| ! | TATAGGGAGCATATCAGCTA+TGG | - | chr1.1:77190702-77190721 | MS.gene71691:CDS | 40.0% |
| ! | TATGGGTGATACGGAGTATT+GGG | - | chr1.1:77186425-77186444 | MS.gene71691:intron | 40.0% |
| ! | TTATGCTGCTTGGCATGTTA+TGG | - | chr1.1:77185798-77185817 | MS.gene71691:intron | 40.0% |
| ! | TTGCTTTGGATTCTGTTGAC+AGG | - | chr1.1:77189020-77189039 | MS.gene71691:intron | 40.0% |
| !! | AGGAAAGCTTGTTTTCTCAG+TGG | - | chr1.1:77189625-77189644 | MS.gene71691:intron | 40.0% |
| !! | CTTGTTTTCTCAGTGGGTTT+AGG | - | chr1.1:77189632-77189651 | MS.gene71691:intron | 40.0% |
| !! | GCCAAGAAGCATTCTTAGTA+TGG | + | chr1.1:77188376-77188395 | None:intergenic | 40.0% |
| !! | GGAAAGCTTGTTTTCTCAGT+GGG | - | chr1.1:77189626-77189645 | MS.gene71691:intron | 40.0% |
| !! | TATTTTGGACATGCGCATCA+AGG | + | chr1.1:77190092-77190111 | None:intergenic | 40.0% |
| !! | TGGAAAAGGTGGACTTCTTT+TGG | - | chr1.1:77190310-77190329 | MS.gene71691:CDS | 40.0% |
| !!! | TGTTTTGGCATCTGAACAGA+TGG | - | chr1.1:77189595-77189614 | MS.gene71691:intron | 40.0% |
| !!! | TTTTGAGACAACCCTGCTTT+TGG | + | chr1.1:77190595-77190614 | None:intergenic | 40.0% |
| !!! | TTTTGGTTTGCCGAAAAGTG+TGG | - | chr1.1:77186649-77186668 | MS.gene71691:CDS | 40.0% |
| AAATGCATAGGACACTGCAC+AGG | - | chr1.1:77186752-77186771 | MS.gene71691:CDS | 45.0% | |
| AAGAACCTGGAACTGTTGCT+GGG | + | chr1.1:77185703-77185722 | None:intergenic | 45.0% | |
| AAGTGCCACAAGCTCTATCA+AGG | - | chr1.1:77189792-77189811 | MS.gene71691:intron | 45.0% | |
| AATGCATAGGACACTGCACA+GGG | - | chr1.1:77186753-77186772 | MS.gene71691:CDS | 45.0% | |
| ACAGCTAGAGAAATGGCTGA+AGG | + | chr1.1:77189402-77189421 | None:intergenic | 45.0% | |
| ACAGGTTTGCCTCCATACAT+GGG | - | chr1.1:77189689-77189708 | MS.gene71691:intron | 45.0% | |
| AGCTGAGCCAATAACCAACA+TGG | + | chr1.1:77190268-77190287 | None:intergenic | 45.0% | |
| AGCTGCTGGAGTTGCATTTA+TGG | - | chr1.1:77190284-77190303 | MS.gene71691:CDS | 45.0% | |
| ATATCAGCTATGGGTTTGGG+AGG | - | chr1.1:77190712-77190731 | MS.gene71691:CDS | 45.0% | |
| ATTCCCTTTGTGCAGGTTAG+CGG | - | chr1.1:77190423-77190442 | MS.gene71691:intron | 45.0% | |
| CAGAGAAACCATGACTATGG+TGG | + | chr1.1:77188750-77188769 | None:intergenic | 45.0% | |
| CCTTACATCCACCATAGTCA+TGG | - | chr1.1:77188739-77188758 | MS.gene71691:intron | 45.0% | |
| CGCGTGCCAATACATTACTA+CGG | + | chr1.1:77185644-77185663 | None:intergenic | 45.0% | |
| CTACGGAGTAACTTGGGATT+TGG | + | chr1.1:77185627-77185646 | None:intergenic | 45.0% | |
| CTGCTGGAGTTGCATTTATG+GGG | - | chr1.1:77190286-77190305 | MS.gene71691:CDS | 45.0% | |
| GAACCTCAGCTAGAGTTGTA+GGG | + | chr1.1:77190518-77190537 | None:intergenic | 45.0% | |
| GAGCATATCAGCTATGGGTT+TGG | - | chr1.1:77190708-77190727 | MS.gene71691:CDS | 45.0% | |
| GAGGTGAGATAAGCTCATCT+TGG | - | chr1.1:77190731-77190750 | MS.gene71691:CDS | 45.0% | |
| GAGTGGAACAGCTAGAGAAA+TGG | + | chr1.1:77189409-77189428 | None:intergenic | 45.0% | |
| GATTCAAACTGAATGCTGCC+AGG | + | chr1.1:77187060-77187079 | None:intergenic | 45.0% | |
| GCAGCATAGCGGTTGAAAAA+AGG | - | chr1.1:77187145-77187164 | MS.gene71691:intron | 45.0% | |
| GCCAGAACTCAGAATCTTGA+GGG | + | chr1.1:77190212-77190231 | None:intergenic | 45.0% | |
| GCTGCTGGAGTTGCATTTAT+GGG | - | chr1.1:77190285-77190304 | MS.gene71691:CDS | 45.0% | |
| GTCGTTTATTCCCTTTGTGC+AGG | - | chr1.1:77190416-77190435 | MS.gene71691:intron | 45.0% | |
| GTTCAGTGAAGCTAATGGCA+AGG | - | chr1.1:77189556-77189575 | MS.gene71691:intron | 45.0% | |
| GTTGTGGTAACATCGCCTAT+AGG | + | chr1.1:77189097-77189116 | None:intergenic | 45.0% | |
| TAGGTCATGTTTGGCACACA+TGG | - | chr1.1:77187292-77187311 | MS.gene71691:CDS | 45.0% | |
| TCAGTGAAGCTAATGGCAAG+GGG | - | chr1.1:77189558-77189577 | MS.gene71691:intron | 45.0% | |
| TCCCTCAAGATTCTGAGTTC+TGG | - | chr1.1:77190208-77190227 | MS.gene71691:CDS | 45.0% | |
| TCGCTCTAATGTCCTTGACT+AGG | - | chr1.1:77189427-77189446 | MS.gene71691:intron | 45.0% | |
| TGCCAGAACTCAGAATCTTG+AGG | + | chr1.1:77190213-77190232 | None:intergenic | 45.0% | |
| TGGAGTTGCATTTATGGGGA+TGG | - | chr1.1:77190290-77190309 | MS.gene71691:CDS | 45.0% | |
| TGTGAGACGAGTAATCTTGC+TGG | + | chr1.1:77186856-77186875 | None:intergenic | 45.0% | |
| TTCAAACTGAATGCTGCCAG+GGG | + | chr1.1:77187058-77187077 | None:intergenic | 45.0% | |
| TTCGTAGTGCAAGTTGCCAT+AGG | - | chr1.1:77190632-77190651 | MS.gene71691:intron | 45.0% | |
| TTGTAGGGAGGGAAATGTTG+AGG | + | chr1.1:77190503-77190522 | None:intergenic | 45.0% | |
| ! | ACGGTGATGTTTTTCCAGCT+TGG | - | chr1.1:77190032-77190051 | MS.gene71691:CDS | 45.0% |
| ! | CCATTGGTTGCTGCAACAAT+GGG | - | chr1.1:77190165-77190184 | MS.gene71691:intron | 45.0% |
| ! | GCAGGATTCTTCCGATGTTT+TGG | - | chr1.1:77189580-77189599 | MS.gene71691:intron | 45.0% |
| ! | GCTGAGGTTCCTTTTCTTTC+TGG | - | chr1.1:77190528-77190547 | MS.gene71691:intron | 45.0% |
| ! | GTGATGTTTTTCCAGCTTGG+AGG | - | chr1.1:77190035-77190054 | MS.gene71691:CDS | 45.0% |
| ! | TCCATTGGTTGCTGCAACAA+TGG | - | chr1.1:77190164-77190183 | MS.gene71691:intron | 45.0% |
| !! | ATGGGTGATACGGAGTATTG+GGG | - | chr1.1:77186426-77186445 | MS.gene71691:intron | 45.0% |
| !! | CCATGACTATGGTGGATGTA+AGG | + | chr1.1:77188742-77188761 | None:intergenic | 45.0% |
| !! | CTCTTTGGCTCCACACTTTT+CGG | + | chr1.1:77186662-77186681 | None:intergenic | 45.0% |
| !! | GTTGCATTTTGTGCTGGTAC+TGG | - | chr1.1:77190237-77190256 | MS.gene71691:CDS | 45.0% |
| !! | TGATTTGCTCAAAGCGGTTG+CGG | - | chr1.1:77186114-77186133 | MS.gene71691:CDS | 45.0% |
| AAAGCCGCTAACCTGCACAA+AGG | + | chr1.1:77190430-77190449 | None:intergenic | 50.0% | |
| AACTTCCCAGCAACAGTTCC+AGG | - | chr1.1:77185695-77185714 | MS.gene71691:intron | 50.0% | |
| AAGCCGCTAACCTGCACAAA+GGG | + | chr1.1:77190429-77190448 | None:intergenic | 50.0% | |
| ACTGCCGTAGTAGCGAAACT+AGG | - | chr1.1:77187397-77187416 | MS.gene71691:intron | 50.0% | |
| AGCAACATCCCCATGTATGG+AGG | + | chr1.1:77189701-77189720 | None:intergenic | 50.0% | |
| AGCTGATGTAGCGGCAATGA+AGG | + | chr1.1:77187352-77187371 | None:intergenic | 50.0% | |
| CAAAGCGGTTGCGGTATTTG+CGG | - | chr1.1:77186123-77186142 | MS.gene71691:CDS | 50.0% | |
| CACAGGTTTGCCTCCATACA+TGG | - | chr1.1:77189688-77189707 | MS.gene71691:intron | 50.0% | |
| CACTTACCACCCAAAGGAGA+AGG | + | chr1.1:77188324-77188343 | None:intergenic | 50.0% | |
| CAGGTTTGCCTCCATACATG+GGG | - | chr1.1:77189690-77189709 | MS.gene71691:intron | 50.0% | |
| CCAAGCAACATCCCCATGTA+TGG | + | chr1.1:77189704-77189723 | None:intergenic | 50.0% | |
| CCATACATGGGGATGTTGCT+TGG | - | chr1.1:77189701-77189720 | MS.gene71691:intron | 50.0% | |
| CCCATTGTTGCAGCAACCAA+TGG | + | chr1.1:77190168-77190187 | None:intergenic | 50.0% | |
| CTCAGCTAGAGTTGTAGGGA+GGG | + | chr1.1:77190514-77190533 | None:intergenic | 50.0% | |
| GAAGAACCTGGAACTGTTGC+TGG | + | chr1.1:77185704-77185723 | None:intergenic | 50.0% | |
| GATTTGCGGCAACCCAAGAA+TGG | + | chr1.1:77186177-77186196 | None:intergenic | 50.0% | |
| GGAACCTCAGCTAGAGTTGT+AGG | + | chr1.1:77190519-77190538 | None:intergenic | 50.0% | |
| GTAATAGCAGCAAATGCGGG+TGG | - | chr1.1:77189061-77189080 | MS.gene71691:intron | 50.0% | |
| GTATGGAGGCAAACCTGTGA+CGG | + | chr1.1:77189687-77189706 | None:intergenic | 50.0% | |
| GTCAAGGACATTAGAGCGAG+TGG | + | chr1.1:77189426-77189445 | None:intergenic | 50.0% | |
| TCAAACTGAATGCTGCCAGG+GGG | + | chr1.1:77187057-77187076 | None:intergenic | 50.0% | |
| TCCTCTCATTGGATTCGTCC+CGG | - | chr1.1:77190792-77190811 | MS.gene71691:CDS | 50.0% | |
| TCTGAACAGATGGCTCCTAG+AGG | - | chr1.1:77189605-77189624 | MS.gene71691:intron | 50.0% | |
| TCTGTTTGATGTCTCGCTGC+AGG | - | chr1.1:77186297-77186316 | MS.gene71691:CDS | 50.0% | |
| TGGAGGCAGCAGGTATTCTT+CGG | - | chr1.1:77190052-77190071 | MS.gene71691:CDS | 50.0% | |
| TTTCGCTACTACGGCAGTCA+TGG | + | chr1.1:77187395-77187414 | None:intergenic | 50.0% | |
| ! | ATGGGGATGTTGCTTGGACT+TGG | - | chr1.1:77189707-77189726 | MS.gene71691:intron | 50.0% |
| ! | GCTTTTGCAGGTTATGCTGC+AGG | - | chr1.1:77190450-77190469 | MS.gene71691:intron | 50.0% |
| ! | GGCGGATCCATGTTGGTTAT+TGG | - | chr1.1:77190258-77190277 | MS.gene71691:CDS | 50.0% |
| ! | TGGGGATGTTGCTTGGACTT+GGG | - | chr1.1:77189708-77189727 | MS.gene71691:intron | 50.0% |
| ! | TTCTTGGGTTGCCGCAAATC+AGG | - | chr1.1:77186177-77186196 | MS.gene71691:CDS | 50.0% |
| !! | GCATTTTGTGCTGGTACTGG+CGG | - | chr1.1:77190240-77190259 | MS.gene71691:CDS | 50.0% |
| !! | GTTAGCGGCTTTGCTTTTGC+AGG | - | chr1.1:77190438-77190457 | MS.gene71691:intron | 50.0% |
| !! | GTTGACTTTTCCATACCCCC+TGG | - | chr1.1:77187039-77187058 | MS.gene71691:intron | 50.0% |
| !! | TTGGTTATTGGCTCAGCTGC+TGG | - | chr1.1:77190270-77190289 | MS.gene71691:CDS | 50.0% |
| AAACCCGCGCCTTCTCCTTT+GGG | - | chr1.1:77188312-77188331 | MS.gene71691:intron | 55.0% | |
| AATACCTGCTGCCTCCAAGC+TGG | + | chr1.1:77190049-77190068 | None:intergenic | 55.0% | |
| ATTCAGCACTAGCGACACCC+CGG | - | chr1.1:77189267-77189286 | MS.gene71691:intron | 55.0% | |
| CCTCAGCTAGAGTTGTAGGG+AGG | + | chr1.1:77190515-77190534 | None:intergenic | 55.0% | |
| CCTCCCTACAACTCTAGCTG+AGG | - | chr1.1:77190512-77190531 | MS.gene71691:intron | 55.0% | |
| CTCGCTGCAGGATCTTGCTA+TGG | - | chr1.1:77186309-77186328 | MS.gene71691:CDS | 55.0% | |
| CTGTGACGGCCTTGAACACT+GGG | + | chr1.1:77189673-77189692 | None:intergenic | 55.0% | |
| GAGTCGTGGCACCAAAAGCA+GGG | - | chr1.1:77190581-77190600 | MS.gene71691:intron | 55.0% | |
| GGAGGCAGCAGGTATTCTTC+GGG | - | chr1.1:77190053-77190072 | MS.gene71691:CDS | 55.0% | |
| GGGCATTCCGACATGACATG+AGG | + | chr1.1:77190834-77190853 | None:intergenic | 55.0% | |
| GGTGGTGCATGGACTCCTAT+AGG | - | chr1.1:77189079-77189098 | MS.gene71691:intron | 55.0% | |
| TATTTGCGGCGGCTGCAACT+GGG | - | chr1.1:77186137-77186156 | MS.gene71691:CDS | 55.0% | |
| TCCGGGACGAATCCAATGAG+AGG | + | chr1.1:77190796-77190815 | None:intergenic | 55.0% | |
| TGAAGCTAATGGCAAGGGGC+AGG | - | chr1.1:77189562-77189581 | MS.gene71691:intron | 55.0% | |
| TGAGTCGTGGCACCAAAAGC+AGG | - | chr1.1:77190580-77190599 | MS.gene71691:intron | 55.0% | |
| ! | AAAGGAGAAGGCGCGGGTTT+CGG | + | chr1.1:77188312-77188331 | None:intergenic | 55.0% |
| ! | GGGGATGTTGCTTGGACTTG+GGG | - | chr1.1:77189709-77189728 | MS.gene71691:intron | 55.0% |
| ! | TGCTTGGACTTGGGGTGCTT+TGG | - | chr1.1:77189717-77189736 | MS.gene71691:intron | 55.0% |
| ! | TTTTCCAGCTTGGAGGCAGC+AGG | - | chr1.1:77190042-77190061 | MS.gene71691:CDS | 55.0% |
| !! | TGGTACTGGCGGATCCATGT+TGG | - | chr1.1:77190251-77190270 | MS.gene71691:CDS | 55.0% |
| ACCACCCAAAGGAGAAGGCG+CGG | + | chr1.1:77188319-77188338 | None:intergenic | 60.0% | |
| AGCGGTTGCGGTATTTGCGG+CGG | - | chr1.1:77186126-77186145 | MS.gene71691:CDS | 60.0% | |
| CAGCAAATGCGGGTGGTGCA+TGG | - | chr1.1:77189068-77189087 | MS.gene71691:intron | 60.0% | |
| CCAGTGTTCAAGGCCGTCAC+AGG | - | chr1.1:77189671-77189690 | MS.gene71691:intron | 60.0% | |
| CCTGTGACGGCCTTGAACAC+TGG | + | chr1.1:77189674-77189693 | None:intergenic | 60.0% | |
| CTGAATGCTGCCAGGGGGTA+TGG | + | chr1.1:77187052-77187071 | None:intergenic | 60.0% | |
| GAAACCCGCGCCTTCTCCTT+TGG | - | chr1.1:77188311-77188330 | MS.gene71691:intron | 60.0% | |
| GTATTTGCGGCGGCTGCAAC+TGG | - | chr1.1:77186136-77186155 | MS.gene71691:CDS | 60.0% | |
| ! | AAGGAGAAGGCGCGGGTTTC+GGG | + | chr1.1:77188311-77188330 | None:intergenic | 60.0% |
| ! | CCACCCAAAGGAGAAGGCGC+GGG | + | chr1.1:77188318-77188337 | None:intergenic | 65.0% |
| CCCGCGCCTTCTCCTTTGGG+TGG | - | chr1.1:77188315-77188334 | MS.gene71691:intron | 70.0% | |
| GGCGGCTGCAACTGGGACAG+TGG | - | chr1.1:77186144-77186163 | MS.gene71691:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 77185486 | 77190909 | 77185486 | ID=MS.gene71691 |
| chr1.1 | mRNA | 77185486 | 77190909 | 77185486 | ID=MS.gene71691.t1;Parent=MS.gene71691 |
| chr1.1 | exon | 77190679 | 77190909 | 77190679 | ID=MS.gene71691.t1.exon1;Parent=MS.gene71691.t1 |
| chr1.1 | CDS | 77190679 | 77190909 | 77190679 | ID=cds.MS.gene71691.t1;Parent=MS.gene71691.t1 |
| chr1.1 | exon | 77190197 | 77190373 | 77190197 | ID=MS.gene71691.t1.exon2;Parent=MS.gene71691.t1 |
| chr1.1 | CDS | 77190197 | 77190373 | 77190197 | ID=cds.MS.gene71691.t1;Parent=MS.gene71691.t1 |
| chr1.1 | exon | 77189948 | 77190076 | 77189948 | ID=MS.gene71691.t1.exon3;Parent=MS.gene71691.t1 |
| chr1.1 | CDS | 77189948 | 77190076 | 77189948 | ID=cds.MS.gene71691.t1;Parent=MS.gene71691.t1 |
| chr1.1 | exon | 77188059 | 77188235 | 77188059 | ID=MS.gene71691.t1.exon4;Parent=MS.gene71691.t1 |
| chr1.1 | CDS | 77188059 | 77188235 | 77188059 | ID=cds.MS.gene71691.t1;Parent=MS.gene71691.t1 |
| chr1.1 | exon | 77187591 | 77187697 | 77187591 | ID=MS.gene71691.t1.exon5;Parent=MS.gene71691.t1 |
| chr1.1 | CDS | 77187591 | 77187697 | 77187591 | ID=cds.MS.gene71691.t1;Parent=MS.gene71691.t1 |
| chr1.1 | exon | 77187233 | 77187353 | 77187233 | ID=MS.gene71691.t1.exon6;Parent=MS.gene71691.t1 |
| chr1.1 | CDS | 77187233 | 77187353 | 77187233 | ID=cds.MS.gene71691.t1;Parent=MS.gene71691.t1 |
| chr1.1 | exon | 77186947 | 77187008 | 77186947 | ID=MS.gene71691.t1.exon7;Parent=MS.gene71691.t1 |
| chr1.1 | CDS | 77186947 | 77187008 | 77186947 | ID=cds.MS.gene71691.t1;Parent=MS.gene71691.t1 |
| chr1.1 | exon | 77186528 | 77186833 | 77186528 | ID=MS.gene71691.t1.exon8;Parent=MS.gene71691.t1 |
| chr1.1 | CDS | 77186528 | 77186833 | 77186528 | ID=cds.MS.gene71691.t1;Parent=MS.gene71691.t1 |
| chr1.1 | exon | 77186051 | 77186345 | 77186051 | ID=MS.gene71691.t1.exon9;Parent=MS.gene71691.t1 |
| chr1.1 | CDS | 77186051 | 77186345 | 77186051 | ID=cds.MS.gene71691.t1;Parent=MS.gene71691.t1 |
| chr1.1 | exon | 77185846 | 77185957 | 77185846 | ID=MS.gene71691.t1.exon10;Parent=MS.gene71691.t1 |
| chr1.1 | CDS | 77185846 | 77185957 | 77185846 | ID=cds.MS.gene71691.t1;Parent=MS.gene71691.t1 |
| chr1.1 | exon | 77185486 | 77185688 | 77185486 | ID=MS.gene71691.t1.exon11;Parent=MS.gene71691.t1 |
| chr1.1 | CDS | 77185486 | 77185688 | 77185486 | ID=cds.MS.gene71691.t1;Parent=MS.gene71691.t1 |
| Gene Sequence |
| Protein sequence |
