Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72188.t1 | XP_013446997.1 | 98 | 350 | 7 | 0 | 1 | 350 | 1 | 350 | 5.80E-201 | 709.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72188.t1 | B0M3E8 | 91.7 | 350 | 29 | 0 | 1 | 350 | 1 | 350 | 2.5e-192 | 672.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72188.t1 | B7FK31 | 98.0 | 350 | 7 | 0 | 1 | 350 | 1 | 350 | 4.2e-201 | 709.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene22302 | MS.gene72188 | PPI |
| MS.gene61100 | MS.gene72188 | PPI |
| MS.gene21669 | MS.gene72188 | PPI |
| MS.gene55805 | MS.gene72188 | PPI |
| MS.gene069594 | MS.gene72188 | PPI |
| MS.gene22301 | MS.gene72188 | PPI |
| MS.gene048934 | MS.gene72188 | PPI |
| MS.gene72188 | MS.gene31166 | PPI |
| MS.gene72188 | MS.gene052130 | PPI |
| MS.gene45481 | MS.gene72188 | PPI |
| MS.gene21670 | MS.gene72188 | PPI |
| MS.gene72188 | MS.gene024691 | PPI |
| MS.gene021092 | MS.gene72188 | PPI |
| MS.gene024690 | MS.gene72188 | PPI |
| MS.gene72188 | MS.gene06078 | PPI |
| MS.gene72188 | MS.gene30948 | PPI |
| MS.gene72188 | MS.gene41197 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72188.t1 | MTR_8g096880 | 98.000 | 350 | 7 | 0 | 1 | 350 | 1 | 350 | 0.0 | 718 |
| MS.gene72188.t1 | MTR_8g096880 | 97.833 | 323 | 7 | 0 | 1 | 323 | 1 | 323 | 0.0 | 657 |
| MS.gene72188.t1 | MTR_4g134490 | 79.598 | 348 | 71 | 0 | 3 | 350 | 22 | 369 | 0.0 | 597 |
| MS.gene72188.t1 | MTR_8g096880 | 97.279 | 294 | 8 | 0 | 1 | 294 | 1 | 294 | 0.0 | 592 |
| MS.gene72188.t1 | MTR_4g134490 | 78.249 | 354 | 71 | 1 | 3 | 350 | 22 | 375 | 0.0 | 590 |
| MS.gene72188.t1 | MTR_5g009170 | 68.000 | 350 | 109 | 3 | 1 | 350 | 42 | 388 | 2.16e-176 | 495 |
| MS.gene72188.t1 | MTR_8g099535 | 67.930 | 343 | 108 | 2 | 4 | 346 | 2 | 342 | 1.20e-174 | 489 |
| MS.gene72188.t1 | MTR_5g009160 | 65.889 | 343 | 115 | 2 | 4 | 346 | 2 | 342 | 6.74e-169 | 474 |
| MS.gene72188.t1 | MTR_5g009160 | 69.145 | 269 | 82 | 1 | 78 | 346 | 12 | 279 | 3.68e-139 | 396 |
| MS.gene72188.t1 | MTR_5g009160 | 68.664 | 217 | 67 | 1 | 78 | 294 | 12 | 227 | 3.52e-107 | 313 |
| MS.gene72188.t1 | MTR_2g032100 | 40.571 | 350 | 184 | 8 | 8 | 346 | 73 | 409 | 9.65e-82 | 254 |
| MS.gene72188.t1 | MTR_8g089180 | 39.143 | 350 | 189 | 8 | 8 | 346 | 73 | 409 | 2.45e-78 | 246 |
| MS.gene72188.t1 | MTR_8g089180 | 39.143 | 350 | 189 | 8 | 8 | 346 | 73 | 409 | 2.45e-78 | 246 |
| MS.gene72188.t1 | MTR_2g032100 | 41.026 | 195 | 112 | 3 | 8 | 202 | 73 | 264 | 6.28e-45 | 156 |
| MS.gene72188.t1 | MTR_1g009600 | 27.350 | 351 | 214 | 13 | 6 | 345 | 5 | 325 | 2.59e-22 | 98.6 |
| MS.gene72188.t1 | MTR_4g024600 | 28.916 | 332 | 198 | 12 | 8 | 323 | 103 | 412 | 1.04e-21 | 95.9 |
| MS.gene72188.t1 | MTR_5g011940 | 28.280 | 343 | 216 | 11 | 8 | 338 | 92 | 416 | 2.21e-21 | 94.7 |
| MS.gene72188.t1 | MTR_2g073240 | 25.843 | 356 | 217 | 14 | 4 | 345 | 17 | 339 | 4.78e-21 | 94.7 |
| MS.gene72188.t1 | MTR_8g099285 | 74.545 | 55 | 13 | 1 | 238 | 292 | 3 | 56 | 1.61e-20 | 84.3 |
| MS.gene72188.t1 | MTR_4g102270 | 27.500 | 360 | 207 | 11 | 3 | 338 | 90 | 419 | 5.08e-20 | 90.9 |
| MS.gene72188.t1 | MTR_3g084090 | 28.080 | 349 | 209 | 14 | 8 | 338 | 101 | 425 | 1.58e-19 | 89.7 |
| MS.gene72188.t1 | MTR_0354s0040 | 26.912 | 353 | 214 | 13 | 8 | 341 | 84 | 411 | 1.23e-18 | 86.7 |
| MS.gene72188.t1 | MTR_0034s0060 | 24.719 | 356 | 221 | 14 | 4 | 345 | 135 | 457 | 3.74e-18 | 86.3 |
| MS.gene72188.t1 | MTR_4g129820 | 26.149 | 348 | 217 | 12 | 8 | 338 | 97 | 421 | 1.93e-17 | 83.2 |
| MS.gene72188.t1 | MTR_4g120030 | 26.126 | 333 | 194 | 15 | 6 | 330 | 111 | 399 | 2.34e-13 | 71.2 |
| MS.gene72188.t1 | MTR_4g063600 | 25.526 | 333 | 206 | 14 | 4 | 330 | 30 | 326 | 4.76e-13 | 69.7 |
| MS.gene72188.t1 | MTR_2g096660 | 24.924 | 329 | 205 | 13 | 3 | 325 | 35 | 327 | 8.59e-13 | 68.9 |
| MS.gene72188.t1 | MTR_1g088480 | 25.231 | 325 | 195 | 14 | 7 | 325 | 119 | 401 | 7.85e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72188.t1 | AT1G12780 | 86.167 | 347 | 48 | 0 | 3 | 349 | 4 | 350 | 0.0 | 635 |
| MS.gene72188.t1 | AT1G63180 | 83.621 | 348 | 57 | 0 | 3 | 350 | 4 | 351 | 0.0 | 622 |
| MS.gene72188.t1 | AT1G63180 | 84.138 | 290 | 46 | 0 | 3 | 292 | 4 | 293 | 0.0 | 517 |
| MS.gene72188.t1 | AT4G10960 | 67.836 | 342 | 108 | 2 | 5 | 346 | 3 | 342 | 9.44e-177 | 494 |
| MS.gene72188.t1 | AT1G64440 | 67.347 | 343 | 110 | 2 | 8 | 350 | 5 | 345 | 6.76e-175 | 489 |
| MS.gene72188.t1 | AT4G23920 | 66.962 | 339 | 110 | 2 | 5 | 343 | 2 | 338 | 3.87e-171 | 480 |
| MS.gene72188.t1 | AT5G44480 | 38.746 | 351 | 191 | 8 | 8 | 347 | 73 | 410 | 4.13e-79 | 248 |
| MS.gene72188.t1 | AT5G44480 | 38.746 | 351 | 191 | 8 | 8 | 347 | 73 | 410 | 4.13e-79 | 248 |
| MS.gene72188.t1 | AT5G44480 | 38.746 | 351 | 191 | 8 | 8 | 347 | 73 | 410 | 4.13e-79 | 248 |
| MS.gene72188.t1 | AT5G44480 | 38.746 | 351 | 191 | 8 | 8 | 347 | 97 | 434 | 9.65e-79 | 248 |
| MS.gene72188.t1 | AT4G20460 | 38.746 | 351 | 191 | 8 | 8 | 347 | 72 | 409 | 4.02e-78 | 245 |
| MS.gene72188.t1 | AT1G30620 | 38.571 | 350 | 191 | 8 | 8 | 346 | 72 | 408 | 4.87e-76 | 240 |
| MS.gene72188.t1 | AT1G30620 | 38.571 | 350 | 191 | 8 | 8 | 346 | 73 | 409 | 5.12e-76 | 240 |
| MS.gene72188.t1 | AT1G30620 | 38.571 | 350 | 191 | 8 | 8 | 346 | 73 | 409 | 5.12e-76 | 240 |
| MS.gene72188.t1 | AT1G30620 | 38.571 | 350 | 191 | 8 | 8 | 346 | 73 | 409 | 5.12e-76 | 240 |
| MS.gene72188.t1 | AT1G30620 | 38.571 | 350 | 191 | 8 | 8 | 346 | 73 | 409 | 5.12e-76 | 240 |
| MS.gene72188.t1 | AT2G34850 | 37.229 | 231 | 137 | 5 | 120 | 346 | 1 | 227 | 2.82e-43 | 150 |
| MS.gene72188.t1 | AT2G34850 | 37.229 | 231 | 137 | 5 | 120 | 346 | 1 | 227 | 2.82e-43 | 150 |
| MS.gene72188.t1 | AT2G34850 | 37.229 | 231 | 137 | 5 | 120 | 346 | 1 | 227 | 2.82e-43 | 150 |
| MS.gene72188.t1 | AT2G34850 | 37.229 | 231 | 137 | 5 | 120 | 346 | 1 | 227 | 2.82e-43 | 150 |
| MS.gene72188.t1 | AT1G30620 | 38.462 | 195 | 117 | 3 | 8 | 202 | 73 | 264 | 1.89e-41 | 147 |
| MS.gene72188.t1 | AT4G00110 | 27.168 | 346 | 216 | 12 | 8 | 338 | 93 | 417 | 2.46e-21 | 94.7 |
| MS.gene72188.t1 | AT3G23820 | 28.035 | 346 | 213 | 11 | 8 | 338 | 114 | 438 | 4.47e-21 | 94.4 |
| MS.gene72188.t1 | AT2G45310 | 27.586 | 348 | 212 | 13 | 8 | 338 | 99 | 423 | 4.52e-21 | 94.0 |
| MS.gene72188.t1 | AT1G02000 | 27.378 | 347 | 214 | 13 | 8 | 338 | 94 | 418 | 1.06e-20 | 93.2 |
| MS.gene72188.t1 | AT1G53500 | 26.271 | 354 | 214 | 14 | 6 | 345 | 9 | 329 | 2.48e-20 | 92.8 |
| MS.gene72188.t1 | AT4G12250 | 28.613 | 346 | 211 | 13 | 8 | 338 | 98 | 422 | 5.91e-19 | 87.8 |
| MS.gene72188.t1 | AT1G78570 | 25.352 | 355 | 220 | 13 | 4 | 345 | 5 | 327 | 1.99e-18 | 87.0 |
| MS.gene72188.t1 | AT4G30440 | 26.446 | 363 | 218 | 14 | 8 | 349 | 90 | 424 | 4.29e-17 | 82.4 |
| MS.gene72188.t1 | AT2G47650 | 25.680 | 331 | 201 | 14 | 7 | 330 | 122 | 414 | 2.40e-15 | 77.0 |
| MS.gene72188.t1 | AT3G53520 | 25.788 | 349 | 212 | 14 | 7 | 345 | 121 | 432 | 2.82e-15 | 77.0 |
| MS.gene72188.t1 | AT3G62830 | 25.680 | 331 | 201 | 14 | 7 | 330 | 120 | 412 | 2.96e-15 | 77.0 |
| MS.gene72188.t1 | AT3G62830 | 25.680 | 331 | 201 | 14 | 7 | 330 | 120 | 412 | 2.96e-15 | 77.0 |
| MS.gene72188.t1 | AT2G28760 | 24.925 | 333 | 208 | 14 | 4 | 330 | 29 | 325 | 7.69e-14 | 72.0 |
| MS.gene72188.t1 | AT2G28760 | 24.925 | 333 | 208 | 14 | 4 | 330 | 29 | 325 | 7.69e-14 | 72.0 |
| MS.gene72188.t1 | AT2G28760 | 24.925 | 333 | 208 | 14 | 4 | 330 | 29 | 325 | 7.69e-14 | 72.0 |
| MS.gene72188.t1 | AT2G28760 | 24.925 | 333 | 208 | 14 | 4 | 330 | 60 | 356 | 1.50e-13 | 71.6 |
| MS.gene72188.t1 | AT3G53520 | 25.788 | 349 | 210 | 15 | 7 | 345 | 121 | 430 | 2.05e-13 | 71.2 |
| MS.gene72188.t1 | AT2G47650 | 25.223 | 337 | 201 | 15 | 7 | 330 | 122 | 420 | 3.13e-13 | 70.9 |
| MS.gene72188.t1 | AT3G46440 | 24.324 | 333 | 210 | 14 | 4 | 330 | 27 | 323 | 1.10e-12 | 68.6 |
| MS.gene72188.t1 | AT3G46440 | 24.324 | 333 | 210 | 14 | 4 | 330 | 27 | 323 | 1.10e-12 | 68.6 |
| MS.gene72188.t1 | AT3G53520 | 26.124 | 356 | 191 | 18 | 7 | 330 | 121 | 436 | 1.47e-12 | 68.9 |
Find 102 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATCATCTGCTACTGTTTA+TGG | 0.137115 | 4.2:+6990846 | MS.gene72188:CDS |
| ATATAAGGCATGAGATTATT+TGG | 0.206042 | 4.2:-6991272 | None:intergenic |
| CACCGGTGACCAGGATCTTT+TGG | 0.235861 | 4.2:-6989709 | None:intergenic |
| GGCCAAATATAATTGTAAAA+AGG | 0.261914 | 4.2:+6990150 | MS.gene72188:CDS |
| CATCTCCTCTACACCATATT+TGG | 0.270436 | 4.2:-6992545 | None:intergenic |
| TCTCAGAATTAAAGATGATT+TGG | 0.312137 | 4.2:+6989895 | MS.gene72188:CDS |
| ATTATCGAAATTATCAATAA+TGG | 0.318002 | 4.2:-6989792 | None:intergenic |
| TCAGAATCTCGATTTCACTA+TGG | 0.322494 | 4.2:+6989868 | MS.gene72188:CDS |
| TCTGCATTTGAGAAAGCTTC+TGG | 0.322524 | 4.2:+6992079 | MS.gene72188:CDS |
| CACCGAGTTTACCACTTTCA+TGG | 0.335121 | 4.2:-6991232 | None:intergenic |
| ACAGCTACTTGCTGTATATA+AGG | 0.342436 | 4.2:-6991287 | None:intergenic |
| TATAAGGCATGAGATTATTT+GGG | 0.365430 | 4.2:-6991271 | None:intergenic |
| TAATTTCGATAATTCTGTTA+TGG | 0.375036 | 4.2:+6989802 | MS.gene72188:CDS |
| TATCTCTTGCAATTTCTTCA+AGG | 0.375499 | 4.2:-6991148 | None:intergenic |
| GGTCCGGCCATAGGGATTCA+TGG | 0.376978 | 4.2:-6990913 | None:intergenic |
| CCACTTTCATGGGCTCCAAC+TGG | 0.384370 | 4.2:-6991221 | None:intergenic |
| TGTGCAGGGATCAGTGGAAC+TGG | 0.404339 | 4.2:+6992566 | MS.gene72188:CDS |
| TTACCTGAGCTCAATGTATA+TGG | 0.409586 | 4.2:+6991317 | MS.gene72188:CDS |
| ACTGCTTACAACTTGGGAAC+TGG | 0.414239 | 4.2:+6992028 | MS.gene72188:CDS |
| ACGGTGCTTCAGCTTCTTCA+AGG | 0.422997 | 4.2:+6989755 | MS.gene72188:CDS |
| TATCAATCTCTATGAAGTTA+TGG | 0.427157 | 4.2:+6990129 | MS.gene72188:CDS |
| AGTAAAATGATCTTCCATTC+TGG | 0.431084 | 4.2:-6991185 | None:intergenic |
| CTTCTTGGACACAACTTCAA+TGG | 0.436103 | 4.2:-6992237 | None:intergenic |
| ACCGGTGGTGCTGGTTTCAT+CGG | 0.443173 | 4.2:+6989725 | MS.gene72188:CDS |
| ATCCTGGTCACCGGTGGTGC+TGG | 0.444164 | 4.2:+6989716 | MS.gene72188:CDS |
| GAACAACCCATGGGGTTACT+CGG | 0.453711 | 4.2:+6992594 | MS.gene72188:CDS |
| AGTTACCTTGGTCCGGCCAT+AGG | 0.453772 | 4.2:-6990922 | None:intergenic |
| CAGAATCTCGATTTCACTAT+GGG | 0.461544 | 4.2:+6989869 | MS.gene72188:CDS |
| GAGATTATTTGGGATGCCCC+TGG | 0.467920 | 4.2:-6991261 | None:intergenic |
| TTCAAATAGCTGAGCCAGAA+TGG | 0.470897 | 4.2:+6991171 | MS.gene72188:CDS |
| TACAACTTGGGAACTGGCCG+TGG | 0.472074 | 4.2:+6992034 | MS.gene72188:CDS |
| ACCGAGTTTACCACTTTCAT+GGG | 0.472646 | 4.2:-6991231 | None:intergenic |
| CTGAGATACTTCAATCCAGT+TGG | 0.475700 | 4.2:+6991206 | MS.gene72188:CDS |
| AAGCTCAGAAAGAACTTGGC+TGG | 0.476588 | 4.2:+6992298 | MS.gene72188:CDS |
| TCCACACAGGGTATTGTGTC+AGG | 0.481381 | 4.2:-6990873 | None:intergenic |
| AACAACCCATGGGGTTACTC+GGG | 0.481728 | 4.2:+6992595 | MS.gene72188:CDS |
| TGGTACATCTGTGCTTGAAA+TGG | 0.482706 | 4.2:+6992054 | MS.gene72188:CDS |
| ATGGTGTAGAGGAGATGTGC+AGG | 0.488200 | 4.2:+6992551 | MS.gene72188:CDS |
| GTAAACTCGGTGAAGATCCC+AGG | 0.496299 | 4.2:+6991243 | MS.gene72188:CDS |
| GGGTGATAGTTACCTTGGTC+CGG | 0.503389 | 4.2:-6990929 | None:intergenic |
| AGGTTGTACTGCTTACAACT+TGG | 0.505052 | 4.2:+6992021 | MS.gene72188:intron |
| GACCGTGTTCGTGAACTTGT+TGG | 0.506832 | 4.2:+6989833 | MS.gene72188:CDS |
| GTTACCTTGGTCCGGCCATA+GGG | 0.507256 | 4.2:-6990921 | None:intergenic |
| AACCAGCACCACCGGTGACC+AGG | 0.507265 | 4.2:-6989718 | None:intergenic |
| TTCATCTTCCCAAAAGATCC+TGG | 0.508087 | 4.2:+6989700 | MS.gene72188:CDS |
| AAGTTGTGTCCAAGAAGGCC+GGG | 0.512692 | 4.2:+6992243 | MS.gene72188:CDS |
| TATATACAGCAAGTAGCTGT+TGG | 0.514025 | 4.2:+6991290 | MS.gene72188:CDS |
| GCCGATGAAACCAGCACCAC+CGG | 0.515032 | 4.2:-6989726 | None:intergenic |
| GGTTGTACTGCTTACAACTT+GGG | 0.516507 | 4.2:+6992022 | MS.gene72188:intron |
| GAAGTTGTGTCCAAGAAGGC+CGG | 0.517669 | 4.2:+6992242 | MS.gene72188:CDS |
| AGATTATTTGGGATGCCCCT+GGG | 0.522440 | 4.2:-6991260 | None:intergenic |
| CATTGAAGTTGTGTCCAAGA+AGG | 0.530821 | 4.2:+6992238 | MS.gene72188:CDS |
| GATAAAGCTCAGAAAGAACT+TGG | 0.533116 | 4.2:+6992294 | MS.gene72188:CDS |
| ATTGTTATCAAAATAGCGAC+GGG | 0.541549 | 4.2:-6990095 | None:intergenic |
| TCCCAAAAGATCCTGGTCAC+CGG | 0.541923 | 4.2:+6989707 | MS.gene72188:CDS |
| ATTTGCAACACTTTCACCAA+CGG | 0.543081 | 4.2:-6990071 | None:intergenic |
| TTTGCTGGATTAAAAGCCGT+TGG | 0.547808 | 4.2:+6990055 | MS.gene72188:CDS |
| TGACCATATACATTGAGCTC+AGG | 0.550727 | 4.2:-6991320 | None:intergenic |
| GGCTTCCCCGAGTAACCCCA+TGG | 0.558191 | 4.2:-6992601 | None:intergenic |
| AGGAGATGTGCAGGGATCAG+TGG | 0.560724 | 4.2:+6992560 | MS.gene72188:CDS |
| ATGGTCATGATTATCCTACC+AGG | 0.562194 | 4.2:+6991336 | MS.gene72188:CDS |
| TGGTTTCATCGGCACTCACA+CGG | 0.567720 | 4.2:+6989736 | MS.gene72188:CDS |
| AAGCCATGAATCCCTATGGC+CGG | 0.576086 | 4.2:+6990910 | MS.gene72188:CDS |
| TTACAAGCCATGAATCCCTA+TGG | 0.577950 | 4.2:+6990906 | MS.gene72188:CDS |
| CCAGTTGGAGCCCATGAAAG+TGG | 0.581440 | 4.2:+6991221 | MS.gene72188:CDS |
| CATGATTATCCTACCAGGGA+TGG | 0.584552 | 4.2:+6991341 | MS.gene72188:CDS |
| CGTTGCGAAAAGCTTTCTCA+CGG | 0.596627 | 4.2:-6991799 | None:intergenic |
| TCGGGACTATATCCATGTGA+TGG | 0.600840 | 4.2:+6991752 | MS.gene72188:CDS |
| AGTTGTGTCCAAGAAGGCCG+GGG | 0.600896 | 4.2:+6992244 | MS.gene72188:CDS |
| TAATTCTGTTATGGAAGCTG+TGG | 0.603301 | 4.2:+6989811 | MS.gene72188:CDS |
| GCCCATGAAAGTGGTAAACT+CGG | 0.607833 | 4.2:+6991230 | MS.gene72188:CDS |
| CAGGGCCAAATATGGTGTAG+AGG | 0.615440 | 4.2:+6992540 | MS.gene72188:intron |
| AAGTACCGCAGAGCCATCCC+TGG | 0.615766 | 4.2:-6991354 | None:intergenic |
| TCGAGATTCTGAGAAAGTTG+AGG | 0.615843 | 4.2:-6989857 | None:intergenic |
| GATTGTTATCAAAATAGCGA+CGG | 0.616877 | 4.2:-6990096 | None:intergenic |
| TAAACCTCAGTAGCATCCCC+CGG | 0.617677 | 4.2:-6992261 | None:intergenic |
| GTGCAGGGATCAGTGGAACT+GGG | 0.619387 | 4.2:+6992567 | MS.gene72188:CDS |
| GTGCTTCAGCTTCTTCAAGG+TGG | 0.623980 | 4.2:+6989758 | MS.gene72188:CDS |
| ACTGGGCTAAGAACAACCCA+TGG | 0.628147 | 4.2:+6992584 | MS.gene72188:CDS |
| TAAACTCGGTGAAGATCCCA+GGG | 0.631953 | 4.2:+6991244 | MS.gene72188:CDS |
| CAAAAGATCCTGGTCACCGG+TGG | 0.634217 | 4.2:+6989710 | MS.gene72188:CDS |
| CATGTGATGGACTTAGCAGA+TGG | 0.636104 | 4.2:+6991765 | MS.gene72188:CDS |
| ACCTGACACAATACCCTGTG+TGG | 0.637616 | 4.2:+6990872 | MS.gene72188:CDS |
| CTGGGCTAAGAACAACCCAT+GGG | 0.638108 | 4.2:+6992585 | MS.gene72188:CDS |
| ATTTGAGAAAGCTTCTGGCA+AGG | 0.639603 | 4.2:+6992084 | MS.gene72188:CDS |
| TAACTTGAAATCCTCCACAC+AGG | 0.643478 | 4.2:-6990886 | None:intergenic |
| GAATCCCTATGGCCGGACCA+AGG | 0.648006 | 4.2:+6990917 | MS.gene72188:CDS |
| TGGTCATGATTATCCTACCA+GGG | 0.649761 | 4.2:+6991337 | MS.gene72188:CDS |
| AACTTGAAATCCTCCACACA+GGG | 0.650612 | 4.2:-6990885 | None:intergenic |
| GACCAACAAGTTCACGAACA+CGG | 0.652988 | 4.2:-6989835 | None:intergenic |
| TCCTACCAGGGATGGCTCTG+CGG | 0.654103 | 4.2:+6991349 | MS.gene72188:CDS |
| CATCTGCTAAGTCCATCACA+TGG | 0.655053 | 4.2:-6991764 | None:intergenic |
| TGGTGTAGAGGAGATGTGCA+GGG | 0.663717 | 4.2:+6992552 | MS.gene72188:CDS |
| ACCGCAGAGCCATCCCTGGT+AGG | 0.669597 | 4.2:-6991350 | None:intergenic |
| TGACACAATACCCTGTGTGG+AGG | 0.670305 | 4.2:+6990875 | MS.gene72188:CDS |
| ACAACCCATGGGGTTACTCG+GGG | 0.677702 | 4.2:+6992596 | MS.gene72188:CDS |
| GCTTCCCCGAGTAACCCCAT+GGG | 0.688095 | 4.2:-6992600 | None:intergenic |
| GTTGTGTCCAAGAAGGCCGG+GGG | 0.716927 | 4.2:+6992245 | MS.gene72188:CDS |
| TTTCAAGCACAGATGTACCA+CGG | 0.723008 | 4.2:-6992051 | None:intergenic |
| TTGTTATCAAAATAGCGACG+GGG | 0.756243 | 4.2:-6990094 | None:intergenic |
| TGGGCTAAGAACAACCCATG+GGG | 0.757527 | 4.2:+6992586 | MS.gene72188:CDS |
| AAACTCGGTGAAGATCCCAG+GGG | 0.837560 | 4.2:+6991245 | MS.gene72188:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTGGTTATAAAATTAA+AGG | + | chr4.2:6991474-6991493 | MS.gene72188:intron | 10.0% |
| !!! | AATTTAAGATTTATATTTCA+CGG | - | chr4.2:6991525-6991544 | None:intergenic | 10.0% |
| !!! | ATTTAACTTTATTTGATTTT+TGG | + | chr4.2:6990438-6990457 | MS.gene72188:intron | 10.0% |
| !! | ATTATCGAAATTATCAATAA+TGG | - | chr4.2:6989795-6989814 | None:intergenic | 15.0% |
| !! | TTCTTAAATAAAATAAGGTT+CGG | + | chr4.2:6991733-6991752 | MS.gene72188:intron | 15.0% |
| !! | TTGTTTAGTTATTAATATTC+TGG | + | chr4.2:6992507-6992526 | MS.gene72188:intron | 15.0% |
| !!! | AACCTTTTTACAATTATATT+TGG | - | chr4.2:6990155-6990174 | None:intergenic | 15.0% |
| !!! | CTGTTTTCTTAAATAAAATA+AGG | + | chr4.2:6991728-6991747 | MS.gene72188:intron | 15.0% |
| !! | AAGATATTATAAGCATAAAC+GGG | - | chr4.2:6990583-6990602 | None:intergenic | 20.0% |
| !! | AAGTTAATTTCTTAATCATC+TGG | + | chr4.2:6992365-6992384 | MS.gene72188:intron | 20.0% |
| !! | AATAACTAAACAAGAATTAC+AGG | - | chr4.2:6992500-6992519 | None:intergenic | 20.0% |
| !! | ATAACTAAACAAGAATTACA+GGG | - | chr4.2:6992499-6992518 | None:intergenic | 20.0% |
| !! | ATTAATTAGAACTCAAAAAC+AGG | - | chr4.2:6991088-6991107 | None:intergenic | 20.0% |
| !! | ATTTATGGCATTTCAAATAT+TGG | + | chr4.2:6991459-6991478 | MS.gene72188:intron | 20.0% |
| !! | CAAGATATTATAAGCATAAA+CGG | - | chr4.2:6990584-6990603 | None:intergenic | 20.0% |
| !! | GAATAAAGAGAAATCTTAAT+TGG | - | chr4.2:6992184-6992203 | None:intergenic | 20.0% |
| !! | GTTAAAATAGCTTATGAAAA+TGG | + | chr4.2:6990401-6990420 | MS.gene72188:intron | 20.0% |
| !! | TAAAAATTCATACTTAGAGA+AGG | + | chr4.2:6991433-6991452 | MS.gene72188:intron | 20.0% |
| !! | TAAAGTCAAAAGTGATAAAT+TGG | + | chr4.2:6991993-6992012 | MS.gene72188:intron | 20.0% |
| !! | TAAGATTTCTCTTTATTCAT+TGG | + | chr4.2:6992186-6992205 | MS.gene72188:intron | 20.0% |
| !! | TAATTTCGATAATTCTGTTA+TGG | + | chr4.2:6989802-6989821 | MS.gene72188:CDS | 20.0% |
| !! | TACTAAAAGTAATCAAAAAC+AGG | - | chr4.2:6991025-6991044 | None:intergenic | 20.0% |
| !! | TCTTAAATAAAATAAGGTTC+GGG | + | chr4.2:6991734-6991753 | MS.gene72188:intron | 20.0% |
| !! | TTATTTAAGAAAACAGAAAG+AGG | - | chr4.2:6991724-6991743 | None:intergenic | 20.0% |
| !!! | GATTTTTGATTATATTTGCA+TGG | + | chr4.2:6990711-6990730 | MS.gene72188:intron | 20.0% |
| !!! | TATTTTGATAACAATCTTGT+TGG | + | chr4.2:6990103-6990122 | MS.gene72188:CDS | 20.0% |
| ! | ACTTAGAGAAGGAAAATTTA+TGG | + | chr4.2:6991444-6991463 | MS.gene72188:intron | 25.0% |
| ! | ATATAAGGCATGAGATTATT+TGG | - | chr4.2:6991275-6991294 | None:intergenic | 25.0% |
| ! | CTTAAACAAAACCACATATA+TGG | + | chr4.2:6990472-6990491 | MS.gene72188:intron | 25.0% |
| ! | GGCCAAATATAATTGTAAAA+AGG | + | chr4.2:6990150-6990169 | MS.gene72188:CDS | 25.0% |
| ! | TATAAGGCATGAGATTATTT+GGG | - | chr4.2:6991274-6991293 | None:intergenic | 25.0% |
| ! | TATCAATCTCTATGAAGTTA+TGG | + | chr4.2:6990129-6990148 | MS.gene72188:CDS | 25.0% |
| ! | TCTCAGAATTAAAGATGATT+TGG | + | chr4.2:6989895-6989914 | MS.gene72188:CDS | 25.0% |
| ! | TGACACTATGACAAATTATT+GGG | + | chr4.2:6991639-6991658 | MS.gene72188:intron | 25.0% |
| ! | TTGTCAGTATCAATAAGTAA+GGG | - | chr4.2:6991854-6991873 | None:intergenic | 25.0% |
| ! | TTGTGATACTATAGAATGTT+TGG | + | chr4.2:6990657-6990676 | MS.gene72188:intron | 25.0% |
| ! | TTTATAGTACGTAACAATCA+TGG | + | chr4.2:6992340-6992359 | MS.gene72188:intron | 25.0% |
| ! | TTTGTCAGTATCAATAAGTA+AGG | - | chr4.2:6991855-6991874 | None:intergenic | 25.0% |
| !!! | AAAGTGATAAATTGGTTTTC+AGG | + | chr4.2:6992001-6992020 | MS.gene72188:intron | 25.0% |
| !!! | AGTGTCACAATTTTAAGAAA+TGG | - | chr4.2:6991626-6991645 | None:intergenic | 25.0% |
| !!! | ATTTATTTTTAGATTCGACG+CGG | + | chr4.2:6990024-6990043 | MS.gene72188:intron | 25.0% |
| !!! | CTCTACTTTTCATTATGATT+TGG | + | chr4.2:6990203-6990222 | MS.gene72188:intron | 25.0% |
| !!! | TTTCTTGTTTTTGCCATATA+CGG | - | chr4.2:6990524-6990543 | None:intergenic | 25.0% |
| AAATGCACTTACCATATATG+TGG | - | chr4.2:6990486-6990505 | None:intergenic | 30.0% | |
| ACGATAATTACAAAGCATGA+CGG | - | chr4.2:6990691-6990710 | None:intergenic | 30.0% | |
| AGTAAAATGATCTTCCATTC+TGG | - | chr4.2:6991188-6991207 | None:intergenic | 30.0% | |
| ATAAAAAATAGCGCAACTTG+TGG | - | chr4.2:6990555-6990574 | None:intergenic | 30.0% | |
| ATCAGTAAGATTATTACGTC+AGG | + | chr4.2:6991884-6991903 | MS.gene72188:intron | 30.0% | |
| ATTGTTATCAAAATAGCGAC+GGG | - | chr4.2:6990098-6990117 | None:intergenic | 30.0% | |
| GACTCTCAAAACAAAAAGAT+TGG | + | chr4.2:6992422-6992441 | MS.gene72188:intron | 30.0% | |
| GATAAAGCAAATAACAGCTT+AGG | + | chr4.2:6991663-6991682 | MS.gene72188:intron | 30.0% | |
| GATTGTTATCAAAATAGCGA+CGG | - | chr4.2:6990099-6990118 | None:intergenic | 30.0% | |
| GTGACACTATGACAAATTAT+TGG | + | chr4.2:6991638-6991657 | MS.gene72188:intron | 30.0% | |
| TATCTCTTGCAATTTCTTCA+AGG | - | chr4.2:6991151-6991170 | None:intergenic | 30.0% | |
| TGGAATTGAAACAAGATTGT+AGG | + | chr4.2:6991914-6991933 | MS.gene72188:intron | 30.0% | |
| TGTCAGTATCAATAAGTAAG+GGG | - | chr4.2:6991853-6991872 | None:intergenic | 30.0% | |
| TTAAGCTGTTTATCCGTATA+TGG | + | chr4.2:6990508-6990527 | MS.gene72188:intron | 30.0% | |
| ! | CTTCAATGGAATTTTCTGAA+AGG | - | chr4.2:6992226-6992245 | None:intergenic | 30.0% |
| ! | TAGATTGTTTTCCCATTTGA+TGG | + | chr4.2:6990964-6990983 | MS.gene72188:intron | 30.0% |
| ! | TATTTGCATGGAAGTTGATT+TGG | + | chr4.2:6990723-6990742 | MS.gene72188:intron | 30.0% |
| !! | TTTTGAGAGTCTTGATCTTT+TGG | - | chr4.2:6992413-6992432 | None:intergenic | 30.0% |
| ACTAGTATACTCTGTAGTGA+AGG | + | chr4.2:6991593-6991612 | MS.gene72188:intron | 35.0% | |
| ATAATTACAAAGCATGACGG+CGG | - | chr4.2:6990688-6990707 | None:intergenic | 35.0% | |
| ATTTGCAACACTTTCACCAA+CGG | - | chr4.2:6990074-6990093 | None:intergenic | 35.0% | |
| CAGAATCTCGATTTCACTAT+GGG | + | chr4.2:6989869-6989888 | MS.gene72188:CDS | 35.0% | |
| CTTTATCATACAGAGATGCA+AGG | - | chr4.2:6991978-6991997 | None:intergenic | 35.0% | |
| GATAAAGCTCAGAAAGAACT+TGG | + | chr4.2:6992294-6992313 | MS.gene72188:CDS | 35.0% | |
| TAATTCTGTTATGGAAGCTG+TGG | + | chr4.2:6989811-6989830 | MS.gene72188:CDS | 35.0% | |
| TATATACAGCAAGTAGCTGT+TGG | + | chr4.2:6991290-6991309 | MS.gene72188:CDS | 35.0% | |
| TCAGAATCTCGATTTCACTA+TGG | + | chr4.2:6989868-6989887 | MS.gene72188:CDS | 35.0% | |
| TCATCATCTGCTACTGTTTA+TGG | + | chr4.2:6990846-6990865 | MS.gene72188:CDS | 35.0% | |
| TTACCTGAGCTCAATGTATA+TGG | + | chr4.2:6991317-6991336 | MS.gene72188:CDS | 35.0% | |
| TTAGAACTCAAAAACAGGCA+TGG | - | chr4.2:6991083-6991102 | None:intergenic | 35.0% | |
| TTGTTATCAAAATAGCGACG+GGG | - | chr4.2:6990097-6990116 | None:intergenic | 35.0% | |
| ! | AACAATCTAGAACAAACCGA+TGG | - | chr4.2:6990953-6990972 | None:intergenic | 35.0% |
| ! | ACAATCTAGAACAAACCGAT+GGG | - | chr4.2:6990952-6990971 | None:intergenic | 35.0% |
| ! | ATATTCTGGACCTTTTCTTC+AGG | + | chr4.2:6992521-6992540 | MS.gene72188:intron | 35.0% |
| ! | TATTCTGGACCTTTTCTTCA+GGG | + | chr4.2:6992522-6992541 | MS.gene72188:intron | 35.0% |
| ! | TCTTTTGGTCAACAAAAGCT+TGG | - | chr4.2:6992398-6992417 | None:intergenic | 35.0% |
| !! | ACAGCTACTTGCTGTATATA+AGG | - | chr4.2:6991290-6991309 | None:intergenic | 35.0% |
| !!! | GATTGTTTTGAGAGAGCTTA+TGG | + | chr4.2:6990333-6990352 | MS.gene72188:intron | 35.0% |
| AACTTGAAATCCTCCACACA+GGG | - | chr4.2:6990888-6990907 | None:intergenic | 40.0% | |
| ACAAGCTCGAAACCATCAAA+TGG | - | chr4.2:6990979-6990998 | None:intergenic | 40.0% | |
| ACCGAGTTTACCACTTTCAT+GGG | - | chr4.2:6991234-6991253 | None:intergenic | 40.0% | |
| AGGTTGTACTGCTTACAACT+TGG | + | chr4.2:6992021-6992040 | MS.gene72188:intron | 40.0% | |
| ATGGTCATGATTATCCTACC+AGG | + | chr4.2:6991336-6991355 | MS.gene72188:CDS | 40.0% | |
| ATTTGAGAAAGCTTCTGGCA+AGG | + | chr4.2:6992084-6992103 | MS.gene72188:CDS | 40.0% | |
| CAAGCTCGAAACCATCAAAT+GGG | - | chr4.2:6990978-6990997 | None:intergenic | 40.0% | |
| CATATTTGGCCCTGAAGAAA+AGG | - | chr4.2:6992534-6992553 | None:intergenic | 40.0% | |
| CATCTCCTCTACACCATATT+TGG | - | chr4.2:6992548-6992567 | None:intergenic | 40.0% | |
| CATTGAAGTTGTGTCCAAGA+AGG | + | chr4.2:6992238-6992257 | MS.gene72188:CDS | 40.0% | |
| CTGAGATACTTCAATCCAGT+TGG | + | chr4.2:6991206-6991225 | MS.gene72188:CDS | 40.0% | |
| CTTCTTGGACACAACTTCAA+TGG | - | chr4.2:6992240-6992259 | None:intergenic | 40.0% | |
| GGTTGTACTGCTTACAACTT+GGG | + | chr4.2:6992022-6992041 | MS.gene72188:intron | 40.0% | |
| TAACTTGAAATCCTCCACAC+AGG | - | chr4.2:6990889-6990908 | None:intergenic | 40.0% | |
| TAATTACAAAGCATGACGGC+GGG | - | chr4.2:6990687-6990706 | None:intergenic | 40.0% | |
| TCTGCATTTGAGAAAGCTTC+TGG | + | chr4.2:6992079-6992098 | MS.gene72188:CDS | 40.0% | |
| TGACCATATACATTGAGCTC+AGG | - | chr4.2:6991323-6991342 | None:intergenic | 40.0% | |
| TGGTACATCTGTGCTTGAAA+TGG | + | chr4.2:6992054-6992073 | MS.gene72188:CDS | 40.0% | |
| TGGTCATGATTATCCTACCA+GGG | + | chr4.2:6991337-6991356 | MS.gene72188:CDS | 40.0% | |
| TTACAAGCCATGAATCCCTA+TGG | + | chr4.2:6990906-6990925 | MS.gene72188:CDS | 40.0% | |
| TTATTACGTCAGGCATGTAC+TGG | + | chr4.2:6991894-6991913 | MS.gene72188:intron | 40.0% | |
| TTCAAATAGCTGAGCCAGAA+TGG | + | chr4.2:6991171-6991190 | MS.gene72188:CDS | 40.0% | |
| TTCATCTTCCCAAAAGATCC+TGG | + | chr4.2:6989700-6989719 | MS.gene72188:CDS | 40.0% | |
| TTTCAAGCACAGATGTACCA+CGG | - | chr4.2:6992054-6992073 | None:intergenic | 40.0% | |
| TTTGCTGGATTAAAAGCCGT+TGG | + | chr4.2:6990055-6990074 | MS.gene72188:CDS | 40.0% | |
| ! | CTTTTCGCAACGGAAAACAT+AGG | + | chr4.2:6991810-6991829 | MS.gene72188:CDS | 40.0% |
| ! | CTTTTCTTCAGGGCCAAATA+TGG | + | chr4.2:6992532-6992551 | MS.gene72188:intron | 40.0% |
| ! | TCGAGATTCTGAGAAAGTTG+AGG | - | chr4.2:6989860-6989879 | None:intergenic | 40.0% |
| ! | TGCAGAAGCACAAACATGTT+AGG | - | chr4.2:6990814-6990833 | None:intergenic | 40.0% |
| AAGCTCAGAAAGAACTTGGC+TGG | + | chr4.2:6992298-6992317 | MS.gene72188:CDS | 45.0% | |
| AATCCAAACCAGAGAGCGAT+TGG | - | chr4.2:6990275-6990294 | None:intergenic | 45.0% | |
| AATTACAAAGCATGACGGCG+GGG | - | chr4.2:6990686-6990705 | None:intergenic | 45.0% | |
| ACTGCTTACAACTTGGGAAC+TGG | + | chr4.2:6992028-6992047 | MS.gene72188:CDS | 45.0% | |
| CACCGAGTTTACCACTTTCA+TGG | - | chr4.2:6991235-6991254 | None:intergenic | 45.0% | |
| CATCTGCTAAGTCCATCACA+TGG | - | chr4.2:6991767-6991786 | None:intergenic | 45.0% | |
| CATGATTATCCTACCAGGGA+TGG | + | chr4.2:6991341-6991360 | MS.gene72188:CDS | 45.0% | |
| CCAAGGTAACTATCACCCAT+CGG | + | chr4.2:6990934-6990953 | MS.gene72188:intron | 45.0% | |
| CGTTGCGAAAAGCTTTCTCA+CGG | - | chr4.2:6991802-6991821 | None:intergenic | 45.0% | |
| GACCAACAAGTTCACGAACA+CGG | - | chr4.2:6989838-6989857 | None:intergenic | 45.0% | |
| GCCCATGAAAGTGGTAAACT+CGG | + | chr4.2:6991230-6991249 | MS.gene72188:CDS | 45.0% | |
| TCGGGACTATATCCATGTGA+TGG | + | chr4.2:6991752-6991771 | MS.gene72188:CDS | 45.0% | |
| TGTTTGTGCTTCTGCACAGA+TGG | + | chr4.2:6990818-6990837 | MS.gene72188:intron | 45.0% | |
| ! | AGATTATTTGGGATGCCCCT+GGG | - | chr4.2:6991263-6991282 | None:intergenic | 45.0% |
| ! | CGTGAGAAAGCTTTTCGCAA+CGG | + | chr4.2:6991800-6991819 | MS.gene72188:CDS | 45.0% |
| ! | TAAACTCGGTGAAGATCCCA+GGG | + | chr4.2:6991244-6991263 | MS.gene72188:CDS | 45.0% |
| !! | CATGTGATGGACTTAGCAGA+TGG | + | chr4.2:6991765-6991784 | MS.gene72188:CDS | 45.0% |
| AACAACCCATGGGGTTACTC+GGG | + | chr4.2:6992595-6992614 | MS.gene72188:CDS | 50.0% | |
| AAGCCATGAATCCCTATGGC+CGG | + | chr4.2:6990910-6990929 | MS.gene72188:CDS | 50.0% | |
| AAGTTGTGTCCAAGAAGGCC+GGG | + | chr4.2:6992243-6992262 | MS.gene72188:CDS | 50.0% | |
| ACCTGACACAATACCCTGTG+TGG | + | chr4.2:6990872-6990891 | MS.gene72188:CDS | 50.0% | |
| ACGGTGCTTCAGCTTCTTCA+AGG | + | chr4.2:6989755-6989774 | MS.gene72188:CDS | 50.0% | |
| ACTGGGCTAAGAACAACCCA+TGG | + | chr4.2:6992584-6992603 | MS.gene72188:CDS | 50.0% | |
| ATGGTGTAGAGGAGATGTGC+AGG | + | chr4.2:6992551-6992570 | MS.gene72188:CDS | 50.0% | |
| CAGGGCCAAATATGGTGTAG+AGG | + | chr4.2:6992540-6992559 | MS.gene72188:intron | 50.0% | |
| CCGATGGGTGATAGTTACCT+TGG | - | chr4.2:6990937-6990956 | None:intergenic | 50.0% | |
| CTGGGCTAAGAACAACCCAT+GGG | + | chr4.2:6992585-6992604 | MS.gene72188:CDS | 50.0% | |
| GAACAACCCATGGGGTTACT+CGG | + | chr4.2:6992594-6992613 | MS.gene72188:CDS | 50.0% | |
| GAAGTTGTGTCCAAGAAGGC+CGG | + | chr4.2:6992242-6992261 | MS.gene72188:CDS | 50.0% | |
| GACCGTGTTCGTGAACTTGT+TGG | + | chr4.2:6989833-6989852 | MS.gene72188:CDS | 50.0% | |
| GGGTGATAGTTACCTTGGTC+CGG | - | chr4.2:6990932-6990951 | None:intergenic | 50.0% | |
| GTGCTTCAGCTTCTTCAAGG+TGG | + | chr4.2:6989758-6989777 | MS.gene72188:CDS | 50.0% | |
| GTGTTTGTCCAATCGCTCTC+TGG | + | chr4.2:6990264-6990283 | MS.gene72188:intron | 50.0% | |
| TAAACCTCAGTAGCATCCCC+CGG | - | chr4.2:6992264-6992283 | None:intergenic | 50.0% | |
| TCCCAAAAGATCCTGGTCAC+CGG | + | chr4.2:6989707-6989726 | MS.gene72188:CDS | 50.0% | |
| TGACACAATACCCTGTGTGG+AGG | + | chr4.2:6990875-6990894 | MS.gene72188:CDS | 50.0% | |
| TGGGCTAAGAACAACCCATG+GGG | + | chr4.2:6992586-6992605 | MS.gene72188:CDS | 50.0% | |
| TGGTGTAGAGGAGATGTGCA+GGG | + | chr4.2:6992552-6992571 | MS.gene72188:CDS | 50.0% | |
| TGGTTTCATCGGCACTCACA+CGG | + | chr4.2:6989736-6989755 | MS.gene72188:CDS | 50.0% | |
| TGTCCAATCGCTCTCTGGTT+TGG | + | chr4.2:6990269-6990288 | MS.gene72188:intron | 50.0% | |
| ! | AAACTCGGTGAAGATCCCAG+GGG | + | chr4.2:6991245-6991264 | MS.gene72188:CDS | 50.0% |
| ! | ACCGGTGACCAGGATCTTTT+GGG | - | chr4.2:6989711-6989730 | None:intergenic | 50.0% |
| ! | GACGCGGTGATTCATTTTGC+TGG | + | chr4.2:6990040-6990059 | MS.gene72188:CDS | 50.0% |
| ! | GAGATTATTTGGGATGCCCC+TGG | - | chr4.2:6991264-6991283 | None:intergenic | 50.0% |
| ! | GTAAACTCGGTGAAGATCCC+AGG | + | chr4.2:6991243-6991262 | MS.gene72188:CDS | 50.0% |
| !! | TCCACACAGGGTATTGTGTC+AGG | - | chr4.2:6990876-6990895 | None:intergenic | 50.0% |
| ACAACCCATGGGGTTACTCG+GGG | + | chr4.2:6992596-6992615 | MS.gene72188:CDS | 55.0% | |
| AGGAGATGTGCAGGGATCAG+TGG | + | chr4.2:6992560-6992579 | MS.gene72188:CDS | 55.0% | |
| AGTTACCTTGGTCCGGCCAT+AGG | - | chr4.2:6990925-6990944 | None:intergenic | 55.0% | |
| AGTTGTGTCCAAGAAGGCCG+GGG | + | chr4.2:6992244-6992263 | MS.gene72188:CDS | 55.0% | |
| CAAAAGATCCTGGTCACCGG+TGG | + | chr4.2:6989710-6989729 | MS.gene72188:CDS | 55.0% | |
| CCACTTTCATGGGCTCCAAC+TGG | - | chr4.2:6991224-6991243 | None:intergenic | 55.0% | |
| CCAGTTGGAGCCCATGAAAG+TGG | + | chr4.2:6991221-6991240 | MS.gene72188:CDS | 55.0% | |
| GTGCAGGGATCAGTGGAACT+GGG | + | chr4.2:6992567-6992586 | MS.gene72188:CDS | 55.0% | |
| GTTACCTTGGTCCGGCCATA+GGG | - | chr4.2:6990924-6990943 | None:intergenic | 55.0% | |
| TACAACTTGGGAACTGGCCG+TGG | + | chr4.2:6992034-6992053 | MS.gene72188:CDS | 55.0% | |
| TGTGCAGGGATCAGTGGAAC+TGG | + | chr4.2:6992566-6992585 | MS.gene72188:CDS | 55.0% | |
| ! | CACCGGTGACCAGGATCTTT+TGG | - | chr4.2:6989712-6989731 | None:intergenic | 55.0% |
| !! | ACCGGTGGTGCTGGTTTCAT+CGG | + | chr4.2:6989725-6989744 | MS.gene72188:CDS | 55.0% |
| GAATCCCTATGGCCGGACCA+AGG | + | chr4.2:6990917-6990936 | MS.gene72188:CDS | 60.0% | |
| GCCGATGAAACCAGCACCAC+CGG | - | chr4.2:6989729-6989748 | None:intergenic | 60.0% | |
| GCTTCCCCGAGTAACCCCAT+GGG | - | chr4.2:6992603-6992622 | None:intergenic | 60.0% | |
| GGTCCGGCCATAGGGATTCA+TGG | - | chr4.2:6990916-6990935 | None:intergenic | 60.0% | |
| GTTGTGTCCAAGAAGGCCGG+GGG | + | chr4.2:6992245-6992264 | MS.gene72188:CDS | 60.0% | |
| ! | AAGTACCGCAGAGCCATCCC+TGG | - | chr4.2:6991357-6991376 | None:intergenic | 60.0% |
| ! | TCCTACCAGGGATGGCTCTG+CGG | + | chr4.2:6991349-6991368 | MS.gene72188:CDS | 60.0% |
| AACCAGCACCACCGGTGACC+AGG | - | chr4.2:6989721-6989740 | None:intergenic | 65.0% | |
| AAGGCCGGGGGATGCTACTG+AGG | + | chr4.2:6992257-6992276 | MS.gene72188:CDS | 65.0% | |
| ACCGCAGAGCCATCCCTGGT+AGG | - | chr4.2:6991353-6991372 | None:intergenic | 65.0% | |
| ATCCTGGTCACCGGTGGTGC+TGG | + | chr4.2:6989716-6989735 | MS.gene72188:CDS | 65.0% | |
| GGCTTCCCCGAGTAACCCCA+TGG | - | chr4.2:6992604-6992623 | None:intergenic | 65.0% | |
| GTAGCATCCCCCGGCCTTCT+TGG | - | chr4.2:6992255-6992274 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 6989695 | 6992627 | 6989695 | ID=MS.gene72188 |
| chr4.2 | mRNA | 6989695 | 6992627 | 6989695 | ID=MS.gene72188.t1;Parent=MS.gene72188 |
| chr4.2 | exon | 6989695 | 6989939 | 6989695 | ID=MS.gene72188.t1.exon1;Parent=MS.gene72188.t1 |
| chr4.2 | CDS | 6989695 | 6989939 | 6989695 | ID=cds.MS.gene72188.t1;Parent=MS.gene72188.t1 |
| chr4.2 | exon | 6990036 | 6990171 | 6990036 | ID=MS.gene72188.t1.exon2;Parent=MS.gene72188.t1 |
| chr4.2 | CDS | 6990036 | 6990171 | 6990036 | ID=cds.MS.gene72188.t1;Parent=MS.gene72188.t1 |
| chr4.2 | exon | 6990837 | 6990938 | 6990837 | ID=MS.gene72188.t1.exon3;Parent=MS.gene72188.t1 |
| chr4.2 | CDS | 6990837 | 6990938 | 6990837 | ID=cds.MS.gene72188.t1;Parent=MS.gene72188.t1 |
| chr4.2 | exon | 6991143 | 6991370 | 6991143 | ID=MS.gene72188.t1.exon4;Parent=MS.gene72188.t1 |
| chr4.2 | CDS | 6991143 | 6991370 | 6991143 | ID=cds.MS.gene72188.t1;Parent=MS.gene72188.t1 |
| chr4.2 | exon | 6991750 | 6991831 | 6991750 | ID=MS.gene72188.t1.exon5;Parent=MS.gene72188.t1 |
| chr4.2 | CDS | 6991750 | 6991831 | 6991750 | ID=cds.MS.gene72188.t1;Parent=MS.gene72188.t1 |
| chr4.2 | exon | 6992023 | 6992105 | 6992023 | ID=MS.gene72188.t1.exon6;Parent=MS.gene72188.t1 |
| chr4.2 | CDS | 6992023 | 6992105 | 6992023 | ID=cds.MS.gene72188.t1;Parent=MS.gene72188.t1 |
| chr4.2 | exon | 6992231 | 6992322 | 6992231 | ID=MS.gene72188.t1.exon7;Parent=MS.gene72188.t1 |
| chr4.2 | CDS | 6992231 | 6992322 | 6992231 | ID=cds.MS.gene72188.t1;Parent=MS.gene72188.t1 |
| chr4.2 | exon | 6992543 | 6992627 | 6992543 | ID=MS.gene72188.t1.exon8;Parent=MS.gene72188.t1 |
| chr4.2 | CDS | 6992543 | 6992627 | 6992543 | ID=cds.MS.gene72188.t1;Parent=MS.gene72188.t1 |
| Gene Sequence |
| Protein sequence |