Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78530.t1 | XP_003616291.1 | 88.2 | 987 | 75 | 2 | 1 | 947 | 1 | 986 | 0.00E+00 | 1527.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78530.t1 | Q0WNW4 | 43.5 | 441 | 196 | 10 | 489 | 925 | 272 | 663 | 8.5e-46 | 187.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78530.t1 | G7K1Q1 | 88.2 | 987 | 75 | 2 | 1 | 947 | 1 | 986 | 0.0e+00 | 1527.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene78530 | 0.828361 | 9.38E-55 | -1.69E-46 |
| MS.gene049350 | MS.gene78530 | 0.822087 | 2.86E-53 | -1.69E-46 |
| MS.gene050657 | MS.gene78530 | 0.804255 | 2.36E-49 | -1.69E-46 |
| MS.gene051018 | MS.gene78530 | 0.810055 | 1.39E-50 | -1.69E-46 |
| MS.gene051021 | MS.gene78530 | 0.811068 | 8.42E-51 | -1.69E-46 |
| MS.gene051247 | MS.gene78530 | 0.802031 | 6.80E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene78530 | 0.820344 | 7.21E-53 | -1.69E-46 |
| MS.gene051388 | MS.gene78530 | 0.817369 | 3.42E-52 | -1.69E-46 |
| MS.gene05157 | MS.gene78530 | 0.807043 | 6.13E-50 | -1.69E-46 |
| MS.gene051664 | MS.gene78530 | 0.810405 | 1.17E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene78530 | 0.844586 | 6.90E-59 | -1.69E-46 |
| MS.gene051720 | MS.gene78530 | 0.848428 | 6.17E-60 | -1.69E-46 |
| MS.gene052516 | MS.gene78530 | 0.815902 | 7.29E-52 | -1.69E-46 |
| MS.gene052732 | MS.gene78530 | 0.815334 | 9.75E-52 | -1.69E-46 |
| MS.gene053079 | MS.gene78530 | 0.808043 | 3.76E-50 | -1.69E-46 |
| MS.gene053122 | MS.gene78530 | 0.809873 | 1.53E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene78530 | 0.84651 | 2.08E-59 | -1.69E-46 |
| MS.gene053226 | MS.gene78530 | 0.816015 | 6.88E-52 | -1.69E-46 |
| MS.gene053536 | MS.gene78530 | 0.811639 | 6.33E-51 | -1.69E-46 |
| MS.gene053538 | MS.gene78530 | 0.809549 | 1.79E-50 | -1.69E-46 |
| MS.gene053581 | MS.gene78530 | 0.813652 | 2.30E-51 | -1.69E-46 |
| MS.gene054584 | MS.gene78530 | 0.850378 | 1.77E-60 | -1.69E-46 |
| MS.gene055465 | MS.gene78530 | 0.847076 | 1.45E-59 | -1.69E-46 |
| MS.gene055466 | MS.gene78530 | 0.850165 | 2.03E-60 | -1.69E-46 |
| MS.gene055468 | MS.gene78530 | 0.845804 | 3.23E-59 | -1.69E-46 |
| MS.gene055469 | MS.gene78530 | 0.843433 | 1.41E-58 | -1.69E-46 |
| MS.gene055513 | MS.gene78530 | 0.814997 | 1.16E-51 | -1.69E-46 |
| MS.gene055537 | MS.gene78530 | 0.849657 | 2.81E-60 | -1.69E-46 |
| MS.gene055580 | MS.gene78530 | -0.852586 | 4.19E-61 | -1.69E-46 |
| MS.gene056005 | MS.gene78530 | 0.806133 | 9.54E-50 | -1.69E-46 |
| MS.gene056043 | MS.gene78530 | -0.836119 | 1.13E-56 | -1.69E-46 |
| MS.gene056308 | MS.gene78530 | 0.84284 | 2.02E-58 | -1.69E-46 |
| MS.gene057082 | MS.gene78530 | 0.803666 | 3.13E-49 | -1.69E-46 |
| MS.gene057294 | MS.gene78530 | 0.824508 | 7.77E-54 | -1.69E-46 |
| MS.gene057915 | MS.gene78530 | 0.801842 | 7.44E-49 | -1.69E-46 |
| MS.gene058668 | MS.gene78530 | 0.849345 | 3.43E-60 | -1.69E-46 |
| MS.gene059426 | MS.gene78530 | 0.848957 | 4.40E-60 | -1.69E-46 |
| MS.gene060519 | MS.gene78530 | 0.808252 | 3.39E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene78530 | 0.816794 | 4.60E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78530.t1 | MTR_5g078300 | 92.604 | 987 | 32 | 2 | 1 | 947 | 1 | 986 | 0.0 | 1835 |
| MS.gene78530.t1 | MTR_1g070350 | 35.516 | 397 | 220 | 12 | 539 | 926 | 495 | 864 | 1.77e-39 | 158 |
| MS.gene78530.t1 | MTR_7g115350 | 34.336 | 399 | 215 | 14 | 539 | 926 | 504 | 866 | 1.90e-34 | 142 |
| MS.gene78530.t1 | MTR_0168s0060 | 61.616 | 99 | 38 | 0 | 578 | 676 | 331 | 429 | 6.94e-23 | 104 |
| MS.gene78530.t1 | MTR_4g011540 | 49.485 | 97 | 49 | 0 | 578 | 674 | 286 | 382 | 3.30e-16 | 82.8 |
| MS.gene78530.t1 | MTR_4g107310 | 48.611 | 144 | 68 | 3 | 533 | 676 | 290 | 427 | 4.21e-16 | 82.8 |
| MS.gene78530.t1 | MTR_4g011550 | 48.352 | 91 | 47 | 0 | 585 | 675 | 281 | 371 | 5.95e-16 | 82.8 |
| MS.gene78530.t1 | MTR_4g093150 | 37.037 | 108 | 68 | 0 | 573 | 680 | 68 | 175 | 2.19e-14 | 73.6 |
| MS.gene78530.t1 | MTR_1g054835 | 28.191 | 376 | 201 | 13 | 581 | 917 | 65 | 410 | 3.45e-14 | 76.6 |
| MS.gene78530.t1 | MTR_7g107000 | 40.385 | 104 | 62 | 0 | 581 | 684 | 70 | 173 | 3.60e-14 | 76.6 |
| MS.gene78530.t1 | MTR_4g130400 | 40.952 | 105 | 62 | 0 | 578 | 682 | 6 | 110 | 1.97e-12 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78530.t1 | AT5G16720 | 46.212 | 396 | 170 | 7 | 531 | 925 | 310 | 663 | 2.83e-87 | 294 |
| MS.gene78530.t1 | AT5G16720 | 29.927 | 274 | 106 | 11 | 1 | 217 | 1 | 245 | 3.68e-19 | 93.2 |
| MS.gene78530.t1 | AT1G70750 | 47.453 | 373 | 155 | 11 | 560 | 925 | 400 | 738 | 1.86e-72 | 254 |
| MS.gene78530.t1 | AT1G08800 | 45.763 | 177 | 86 | 5 | 540 | 714 | 858 | 1026 | 4.88e-30 | 129 |
| MS.gene78530.t1 | AT1G08800 | 45.763 | 177 | 86 | 5 | 540 | 714 | 858 | 1026 | 4.88e-30 | 129 |
| MS.gene78530.t1 | AT1G08800 | 45.763 | 177 | 86 | 5 | 540 | 714 | 858 | 1026 | 4.88e-30 | 129 |
| MS.gene78530.t1 | AT1G08800 | 45.763 | 177 | 86 | 5 | 540 | 714 | 858 | 1026 | 4.88e-30 | 129 |
| MS.gene78530.t1 | AT1G74830 | 40.000 | 210 | 118 | 2 | 578 | 787 | 302 | 503 | 4.63e-26 | 114 |
| MS.gene78530.t1 | AT1G18990 | 58.559 | 111 | 44 | 1 | 564 | 674 | 289 | 397 | 1.40e-21 | 100 |
| MS.gene78530.t1 | AT4G13630 | 41.135 | 141 | 69 | 3 | 545 | 681 | 195 | 325 | 1.17e-17 | 88.2 |
| MS.gene78530.t1 | AT4G13630 | 41.135 | 141 | 69 | 3 | 545 | 681 | 195 | 325 | 1.17e-17 | 88.2 |
| MS.gene78530.t1 | AT5G06560 | 40.000 | 100 | 60 | 0 | 581 | 680 | 74 | 173 | 6.30e-16 | 82.4 |
| MS.gene78530.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 584 | 684 | 77 | 177 | 2.18e-15 | 80.1 |
| MS.gene78530.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 584 | 684 | 77 | 177 | 2.18e-15 | 80.1 |
| MS.gene78530.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 584 | 684 | 77 | 177 | 2.18e-15 | 80.1 |
| MS.gene78530.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 584 | 684 | 77 | 177 | 2.18e-15 | 80.1 |
| MS.gene78530.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 584 | 684 | 29 | 129 | 3.03e-15 | 79.3 |
| MS.gene78530.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 584 | 684 | 29 | 129 | 3.03e-15 | 79.3 |
| MS.gene78530.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 584 | 684 | 29 | 129 | 3.03e-15 | 79.3 |
| MS.gene78530.t1 | AT3G54740 | 39.604 | 101 | 61 | 0 | 584 | 684 | 29 | 129 | 3.03e-15 | 79.3 |
| MS.gene78530.t1 | AT1G04890 | 42.969 | 128 | 70 | 2 | 550 | 675 | 82 | 208 | 2.89e-14 | 76.6 |
| MS.gene78530.t1 | AT4G13160 | 47.872 | 94 | 49 | 0 | 581 | 674 | 117 | 210 | 1.55e-13 | 72.8 |
Find 127 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATCTGTTGAAGCCTTCT+TGG | 0.160198 | 5.1:+60613451 | MS.gene78530:CDS |
| GTGAAAATTGCTTGGCTTCT+AGG | 0.206836 | 5.1:+60613277 | MS.gene78530:CDS |
| AAGCAACCAATTGTTCTTCT+TGG | 0.220911 | 5.1:-60616173 | None:intergenic |
| CTTGCTCTTCCATCATTCTT+TGG | 0.232858 | 5.1:-60615641 | None:intergenic |
| ACAGATAAGGAGGGTAAATT+TGG | 0.246430 | 5.1:-60613437 | None:intergenic |
| TGTTTACCTTGTGCATTATC+TGG | 0.252484 | 5.1:-60614179 | None:intergenic |
| ATCCGACAATGACAGAAATT+TGG | 0.280174 | 5.1:+60614465 | MS.gene78530:CDS |
| CAGAAATTTGGAAGCAGATA+TGG | 0.283479 | 5.1:+60614477 | MS.gene78530:CDS |
| TTCTCTGCTTCATCTAAATA+TGG | 0.289720 | 5.1:-60616212 | None:intergenic |
| CAATGTGAAACCTGCATAAT+AGG | 0.290320 | 5.1:-60613774 | None:intergenic |
| CATGAGAAACATGATGAAAA+TGG | 0.306053 | 5.1:+60613369 | MS.gene78530:CDS |
| ATCTGCTGACCTAGGAGTTT+CGG | 0.308210 | 5.1:-60615331 | None:intergenic |
| TCTGCTGACCTAGGAGTTTC+GGG | 0.311430 | 5.1:-60615330 | None:intergenic |
| GATGGAGCTTGAAGAAAGTT+TGG | 0.320863 | 5.1:+60614058 | MS.gene78530:CDS |
| AGAATTTCTCCAACATTGTA+TGG | 0.334868 | 5.1:+60616406 | MS.gene78530:CDS |
| ATAGAATCTATTAACTTAAC+AGG | 0.364312 | 5.1:-60613873 | None:intergenic |
| AGAGGAAGTATTGATCAAAA+TGG | 0.367658 | 5.1:+60614010 | MS.gene78530:CDS |
| AGAAGGAATTGGAAGAGTAT+AGG | 0.372537 | 5.1:+60615739 | MS.gene78530:CDS |
| TGATGATACCGTTTCTAACT+TGG | 0.372874 | 5.1:+60615932 | MS.gene78530:CDS |
| CTATCCATTTCACTTATCAT+AGG | 0.373876 | 5.1:-60616314 | None:intergenic |
| GAAGGAATTGGAAGAGTATA+GGG | 0.377022 | 5.1:+60615740 | MS.gene78530:CDS |
| AGAGGAAAAGATAATTTCAT+TGG | 0.377885 | 5.1:+60616058 | MS.gene78530:CDS |
| TGAATTACGCCTTAAGAACT+TGG | 0.379118 | 5.1:+60616508 | MS.gene78530:CDS |
| GCAAGAACTTGAGAAGGAAT+TGG | 0.385367 | 5.1:+60615728 | MS.gene78530:CDS |
| CACAAAGAAGACTATTCTAA+TGG | 0.388166 | 5.1:+60616128 | MS.gene78530:CDS |
| AAAATGGAGAGAGTTTAAAT+AGG | 0.391672 | 5.1:+60613385 | MS.gene78530:CDS |
| GTAGTTCAAATTTCTGTGAA+TGG | 0.392563 | 5.1:+60614125 | MS.gene78530:CDS |
| CATGAAACTGAAAACTCATT+TGG | 0.392989 | 5.1:+60613309 | MS.gene78530:CDS |
| AGATCAACTCAAAGCATTAG+AGG | 0.392996 | 5.1:+60616040 | MS.gene78530:CDS |
| ACGCTTGACTGCGGTTCAAC+TGG | 0.394086 | 5.1:-60613981 | None:intergenic |
| GATCATTGTCCAAGTTCTTA+AGG | 0.394095 | 5.1:-60616517 | None:intergenic |
| TTGTAATCATTGCCATTGTT+TGG | 0.398108 | 5.1:-60615572 | None:intergenic |
| TTCCAAATTTCTGTCATTGT+CGG | 0.401114 | 5.1:-60614467 | None:intergenic |
| TGTATGGGATCCATACAAAA+TGG | 0.406925 | 5.1:+60616422 | MS.gene78530:CDS |
| TTCTGATGCTCCTATTATGC+AGG | 0.413743 | 5.1:+60613764 | MS.gene78530:CDS |
| CTCTTTGAGAAAACAGAATC+AGG | 0.416556 | 5.1:+60615384 | MS.gene78530:CDS |
| TCTATAACTTTAGAAGTTGA+AGG | 0.420826 | 5.1:+60614086 | MS.gene78530:CDS |
| AGTTCCTATGATAAGTGAAA+TGG | 0.425926 | 5.1:+60616310 | MS.gene78530:CDS |
| AAGAAGAACAATTGGTTGCT+TGG | 0.429766 | 5.1:+60616175 | MS.gene78530:CDS |
| ATTTGCATTTGATAGAGAAT+TGG | 0.437319 | 5.1:+60616253 | MS.gene78530:CDS |
| GTTAGAAACGGTATCATCAT+TGG | 0.443026 | 5.1:-60615928 | None:intergenic |
| TGCACACAAGAAGATGAATC+TGG | 0.444733 | 5.1:+60614358 | MS.gene78530:CDS |
| TAGTACTTTAGAAGAATTTG+AGG | 0.444834 | 5.1:+60615998 | MS.gene78530:CDS |
| CAGTGTAAATGATAATGAAA+TGG | 0.445770 | 5.1:+60615212 | MS.gene78530:CDS |
| AAACTTGAACTCTGATGAAA+GGG | 0.449606 | 5.1:+60613680 | MS.gene78530:CDS |
| AGCCGGTCGATTGTTAAAAC+CGG | 0.449648 | 5.1:-60615459 | None:intergenic |
| TTGAAGCCTTCTTGGTATGA+TGG | 0.459164 | 5.1:+60613459 | MS.gene78530:CDS |
| TTCACCAAGCAATGACTTGT+AGG | 0.460179 | 5.1:+60616562 | MS.gene78530:CDS |
| CAATCTCCAAGAAGAACAAT+TGG | 0.464940 | 5.1:+60616167 | MS.gene78530:CDS |
| AAGATAATTTCATTGGAAGA+TGG | 0.470072 | 5.1:+60616065 | MS.gene78530:CDS |
| AGCACTGAGAGCTCTTTGTT+CGG | 0.478445 | 5.1:-60615499 | None:intergenic |
| CAAACTTGAACTCTGATGAA+AGG | 0.482556 | 5.1:+60613679 | MS.gene78530:CDS |
| GATGAGAGCTCATCAAGATA+TGG | 0.488131 | 5.1:+60616101 | MS.gene78530:CDS |
| AACTGAACTCGATCGATCCT+CGG | 0.488164 | 5.1:-60613655 | None:intergenic |
| CAAGAAGGCTTCAACAGATA+AGG | 0.490047 | 5.1:-60613450 | None:intergenic |
| ACTCATTTGGTATGAGACAT+AGG | 0.495233 | 5.1:+60613322 | MS.gene78530:CDS |
| TACAAGGCTGCAGGAAGAAA+AGG | 0.495890 | 5.1:+60615590 | MS.gene78530:CDS |
| TGAATGCAACTTAACTATAG+TGG | 0.498253 | 5.1:-60616543 | None:intergenic |
| ATAAACTTCCCGAAACTCCT+AGG | 0.503672 | 5.1:+60615322 | MS.gene78530:CDS |
| TGAATCATGCAAATCGAATG+AGG | 0.507100 | 5.1:+60613911 | MS.gene78530:CDS |
| GAGTAGGTTGGTTCTTCAGA+TGG | 0.507610 | 5.1:-60614940 | None:intergenic |
| TATGCCTACAAGTCATTGCT+TGG | 0.507724 | 5.1:-60616566 | None:intergenic |
| ATGTTGAGAAGAATGAAAGA+TGG | 0.509499 | 5.1:+60615801 | MS.gene78530:CDS |
| TCTTGTTCTTGTTGCAACAC+CGG | 0.514596 | 5.1:+60615846 | MS.gene78530:CDS |
| GGCAATGATTACAAGGCTGC+AGG | 0.518083 | 5.1:+60615581 | MS.gene78530:CDS |
| AGGTTGATCGCGTTTATGAC+AGG | 0.518142 | 5.1:+60616360 | MS.gene78530:CDS |
| TGATACCGTTTCTAACTTGG+AGG | 0.518834 | 5.1:+60615935 | MS.gene78530:CDS |
| ATACAAAATGGTGGTGATGA+AGG | 0.519176 | 5.1:+60616434 | MS.gene78530:CDS |
| TGCATTATCTGGTTCTTCTG+TGG | 0.527662 | 5.1:-60614168 | None:intergenic |
| TGACAGTTCATCGGTGTAGC+CGG | 0.531224 | 5.1:-60615865 | None:intergenic |
| AGAAAAGGCGGCAATGCAGA+TGG | 0.535335 | 5.1:+60615605 | MS.gene78530:CDS |
| CTATAACTTTAGAAGTTGAA+GGG | 0.536715 | 5.1:+60614087 | MS.gene78530:CDS |
| TGAGGATCTAGAGGAGGGGA+AGG | 0.539564 | 5.1:+60613929 | MS.gene78530:CDS |
| CATTTCATTATCATTTACAC+TGG | 0.540128 | 5.1:-60615211 | None:intergenic |
| CCATCAATCATCAAAATGCT+CGG | 0.540613 | 5.1:+60615278 | MS.gene78530:CDS |
| GTATGGATCCCATACAATGT+TGG | 0.545411 | 5.1:-60616415 | None:intergenic |
| TGAGGTAGAATACAGTGATC+CGG | 0.546229 | 5.1:+60615440 | MS.gene78530:CDS |
| TGTAGAGAAAACAAACATGA+TGG | 0.547953 | 5.1:+60614040 | MS.gene78530:CDS |
| AGAGAAGCAAGAACTTGAGA+AGG | 0.550787 | 5.1:+60615722 | MS.gene78530:CDS |
| GAAAGTGTGTATTGAAGAAG+AGG | 0.550976 | 5.1:+60616340 | MS.gene78530:CDS |
| TCAATAGAAGATGACAAAGA+AGG | 0.551727 | 5.1:+60613516 | MS.gene78530:CDS |
| AAATGGTGGTGATGAAGGAA+AGG | 0.555471 | 5.1:+60616439 | MS.gene78530:CDS |
| GGATGGTAGCGTTGCAAGTG+AGG | 0.560662 | 5.1:+60615422 | MS.gene78530:CDS |
| ATTGAATTTGAGATAAACAA+TGG | 0.561453 | 5.1:+60613549 | MS.gene78530:CDS |
| ATTACAATACCAAAGAATGA+TGG | 0.564697 | 5.1:+60615632 | MS.gene78530:CDS |
| AGATCATGATCATGATGAAG+AGG | 0.566217 | 5.1:+60613575 | MS.gene78530:CDS |
| GAATTTCTCCAACATTGTAT+GGG | 0.568122 | 5.1:+60616407 | MS.gene78530:CDS |
| TTTGGTATGAGACATAGGAT+TGG | 0.570047 | 5.1:+60613327 | MS.gene78530:CDS |
| TATCTCCTCCAAGTTAGAAA+CGG | 0.572085 | 5.1:-60615940 | None:intergenic |
| TATCCTCAGAGAGGTGGCCG+AGG | 0.572603 | 5.1:+60613638 | MS.gene78530:CDS |
| TAGTTTCCATCATACCAAGA+AGG | 0.574251 | 5.1:-60613465 | None:intergenic |
| TGCAACTTAACTATAGTGGA+TGG | 0.575938 | 5.1:-60616539 | None:intergenic |
| AGAAGAAGAGAGAAGTGCCT+CGG | 0.576136 | 5.1:+60615536 | MS.gene78530:CDS |
| ATAAAATCATCAACAGCACT+TGG | 0.577726 | 5.1:-60613732 | None:intergenic |
| GCAGTCAAGCGTCTTAGAAG+AGG | 0.578658 | 5.1:+60613992 | MS.gene78530:CDS |
| TAGCATGTGTGAAAATTGCT+TGG | 0.580838 | 5.1:+60613269 | MS.gene78530:CDS |
| TGACATGCATTGACTTGAGT+AGG | 0.583561 | 5.1:-60614956 | None:intergenic |
| GCAGCTGAGATTTCAAACCT+TGG | 0.585082 | 5.1:+60613210 | MS.gene78530:CDS |
| GAAGGCTTCAACAGATAAGG+AGG | 0.588495 | 5.1:-60613447 | None:intergenic |
| AAACAATGGCAATGATTACA+AGG | 0.589570 | 5.1:+60615574 | MS.gene78530:CDS |
| TCGAATGAGGATCTAGAGGA+GGG | 0.592079 | 5.1:+60613924 | MS.gene78530:CDS |
| ACTTGCAACGCTACCATCCA+CGG | 0.593320 | 5.1:-60615418 | None:intergenic |
| ATGCATTGACTTGAGTAGGT+TGG | 0.596080 | 5.1:-60614952 | None:intergenic |
| GTTGGTGTTTCTATGTAACA+TGG | 0.600046 | 5.1:-60612980 | None:intergenic |
| GATGATTTGAGCAGTAGCCA+AGG | 0.600442 | 5.1:-60613227 | None:intergenic |
| AAGATCAACTGACAGTTCAT+CGG | 0.602771 | 5.1:-60615874 | None:intergenic |
| AAGCTTGTGACGATGATGAT+CGG | 0.602945 | 5.1:+60613844 | MS.gene78530:CDS |
| TAGGTTGGTTCTTCAGATGG+AGG | 0.608490 | 5.1:-60614937 | None:intergenic |
| ATCGAATGAGGATCTAGAGG+AGG | 0.610877 | 5.1:+60613923 | MS.gene78530:CDS |
| TGCATTGCATCTGCTGACCT+AGG | 0.622751 | 5.1:-60615339 | None:intergenic |
| TGTTTCTCATGACTTAACCA+TGG | 0.628154 | 5.1:-60613357 | None:intergenic |
| GGAGCAGAAGAATCCGTGGA+TGG | 0.629443 | 5.1:+60615405 | MS.gene78530:CDS |
| CGAATGAGGATCTAGAGGAG+GGG | 0.631511 | 5.1:+60613925 | MS.gene78530:CDS |
| ATGCAATGCACTACATGCAG+AGG | 0.632820 | 5.1:+60615352 | MS.gene78530:CDS |
| ATCAGGAGCAGAAGAATCCG+TGG | 0.633581 | 5.1:+60615401 | MS.gene78530:CDS |
| CAAATCGAATGAGGATCTAG+AGG | 0.636941 | 5.1:+60613920 | MS.gene78530:CDS |
| ATCTTCTTCAAGTGACAGTG+AGG | 0.656914 | 5.1:+60614987 | MS.gene78530:CDS |
| TGGATCAAGTGATGATGATG+AGG | 0.658998 | 5.1:+60614378 | MS.gene78530:CDS |
| AATAGCTACTAACCAAACAA+TGG | 0.661079 | 5.1:+60615560 | MS.gene78530:CDS |
| TCTTCTAAGACGCTTGACTG+CGG | 0.662747 | 5.1:-60613990 | None:intergenic |
| GAACAAGAAAATGCTCCACC+AGG | 0.665638 | 5.1:+60614502 | MS.gene78530:CDS |
| TTGGTTAGTAGCTATTGCCG+AGG | 0.667131 | 5.1:-60615553 | None:intergenic |
| AAGGCTTCAACAGATAAGGA+GGG | 0.667591 | 5.1:-60613446 | None:intergenic |
| GATCCTCGGCCACCTCTCTG+AGG | 0.673263 | 5.1:-60613641 | None:intergenic |
| AAGGCTGCAGGAAGAAAAGG+CGG | 0.674245 | 5.1:+60615593 | MS.gene78530:CDS |
| GAAGAACCAGATAATGCACA+AGG | 0.705101 | 5.1:+60614173 | MS.gene78530:CDS |
| ATGGGATCCATACAAAATGG+TGG | 0.735054 | 5.1:+60616425 | MS.gene78530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTTATATAGATTGAAAAA+AGG | - | chr5.1:60615157-60615176 | None:intergenic | 15.0% |
| !! | TTATTAAATTAGCAAATTCT+TGG | + | chr5.1:60614284-60614303 | MS.gene78530:intron | 15.0% |
| !! | ATAGAATCTATTAACTTAAC+AGG | - | chr5.1:60613876-60613895 | None:intergenic | 20.0% |
| !!! | ATTGAATTTGAGATAAACAA+TGG | + | chr5.1:60613549-60613568 | MS.gene78530:CDS | 20.0% |
| !!! | TAGAATTACAACTATTTTGT+TGG | - | chr5.1:60613001-60613020 | None:intergenic | 20.0% |
| ! | AAAATGGAGAGAGTTTAAAT+AGG | + | chr5.1:60613385-60613404 | MS.gene78530:CDS | 25.0% |
| ! | AAGATAATTTCATTGGAAGA+TGG | + | chr5.1:60616065-60616084 | MS.gene78530:CDS | 25.0% |
| ! | AATAAACTGAAAACAGTCTA+TGG | - | chr5.1:60614708-60614727 | None:intergenic | 25.0% |
| ! | AATATCAGCTGAAAAAATTG+AGG | + | chr5.1:60615245-60615264 | MS.gene78530:CDS | 25.0% |
| ! | AATTAATGAACTAGCATAAC+AGG | - | chr5.1:60614565-60614584 | None:intergenic | 25.0% |
| ! | AGAGGAAAAGATAATTTCAT+TGG | + | chr5.1:60616058-60616077 | MS.gene78530:CDS | 25.0% |
| ! | ATTACAATACCAAAGAATGA+TGG | + | chr5.1:60615632-60615651 | MS.gene78530:CDS | 25.0% |
| ! | ATTTGCATTTGATAGAGAAT+TGG | + | chr5.1:60616253-60616272 | MS.gene78530:CDS | 25.0% |
| ! | CATGAATTATTAATACCGTT+TGG | - | chr5.1:60614887-60614906 | None:intergenic | 25.0% |
| ! | CATTTCATTATCATTTACAC+TGG | - | chr5.1:60615214-60615233 | None:intergenic | 25.0% |
| ! | CTTAATTTATCACACATGTT+TGG | + | chr5.1:60614610-60614629 | MS.gene78530:intron | 25.0% |
| ! | GTACTAGATATAAAAACTCA+CGG | - | chr5.1:60615065-60615084 | None:intergenic | 25.0% |
| !! | ACAAAATTTGCCAAATGTTT+TGG | + | chr5.1:60613090-60613109 | MS.gene78530:intron | 25.0% |
| !! | CAGTGTAAATGATAATGAAA+TGG | + | chr5.1:60615212-60615231 | MS.gene78530:CDS | 25.0% |
| !! | CTATAACTTTAGAAGTTGAA+GGG | + | chr5.1:60614087-60614106 | MS.gene78530:CDS | 25.0% |
| !! | GAATGATGATGTTAGATATA+TGG | + | chr5.1:60614258-60614277 | MS.gene78530:intron | 25.0% |
| !! | TAGTACTTTAGAAGAATTTG+AGG | + | chr5.1:60615998-60616017 | MS.gene78530:CDS | 25.0% |
| !! | TCTATAACTTTAGAAGTTGA+AGG | + | chr5.1:60614086-60614105 | MS.gene78530:CDS | 25.0% |
| !! | TTTTCAGTTTCATGATGATT+TGG | - | chr5.1:60613303-60613322 | None:intergenic | 25.0% |
| !!! | ATCATTTACACTGGTTTTAT+CGG | - | chr5.1:60615205-60615224 | None:intergenic | 25.0% |
| !!! | CTGAGAAATGAATTTTTCAA+AGG | - | chr5.1:60614419-60614438 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCATAAACTATTC+TGG | - | chr5.1:60614743-60614762 | None:intergenic | 25.0% |
| AAACAATGGCAATGATTACA+AGG | + | chr5.1:60615574-60615593 | MS.gene78530:CDS | 30.0% | |
| AAACTTGAACTCTGATGAAA+GGG | + | chr5.1:60613680-60613699 | MS.gene78530:CDS | 30.0% | |
| AATAGCTACTAACCAAACAA+TGG | + | chr5.1:60615560-60615579 | MS.gene78530:CDS | 30.0% | |
| AATTCAGATGTTCATCCAAA+CGG | + | chr5.1:60614869-60614888 | MS.gene78530:intron | 30.0% | |
| AGAATTTCTCCAACATTGTA+TGG | + | chr5.1:60616406-60616425 | MS.gene78530:CDS | 30.0% | |
| AGAGTATAGGGAAAAAGTTA+TGG | + | chr5.1:60615752-60615771 | MS.gene78530:CDS | 30.0% | |
| AGTTCCTATGATAAGTGAAA+TGG | + | chr5.1:60616310-60616329 | MS.gene78530:CDS | 30.0% | |
| ATAAAATCATCAACAGCACT+TGG | - | chr5.1:60613735-60613754 | None:intergenic | 30.0% | |
| ATGTTGAGAAGAATGAAAGA+TGG | + | chr5.1:60615801-60615820 | MS.gene78530:CDS | 30.0% | |
| CACAAAGAAGACTATTCTAA+TGG | + | chr5.1:60616128-60616147 | MS.gene78530:CDS | 30.0% | |
| CATGAAACTGAAAACTCATT+TGG | + | chr5.1:60613309-60613328 | MS.gene78530:CDS | 30.0% | |
| CATGAGAAACATGATGAAAA+TGG | + | chr5.1:60613369-60613388 | MS.gene78530:CDS | 30.0% | |
| CTATCCATTTCACTTATCAT+AGG | - | chr5.1:60616317-60616336 | None:intergenic | 30.0% | |
| GAATTTCTCCAACATTGTAT+GGG | + | chr5.1:60616407-60616426 | MS.gene78530:CDS | 30.0% | |
| GTAGTTCAAATTTCTGTGAA+TGG | + | chr5.1:60614125-60614144 | MS.gene78530:CDS | 30.0% | |
| TAGTGTATGCATTTCTTGAA+TGG | + | chr5.1:60613019-60613038 | MS.gene78530:intron | 30.0% | |
| TCAATAGAAGATGACAAAGA+AGG | + | chr5.1:60613516-60613535 | MS.gene78530:CDS | 30.0% | |
| TGAATGCAACTTAACTATAG+TGG | - | chr5.1:60616546-60616565 | None:intergenic | 30.0% | |
| TGTAGAGAAAACAAACATGA+TGG | + | chr5.1:60614040-60614059 | MS.gene78530:CDS | 30.0% | |
| TTCCAAATTTCTGTCATTGT+CGG | - | chr5.1:60614470-60614489 | None:intergenic | 30.0% | |
| TTCTCTGCTTCATCTAAATA+TGG | - | chr5.1:60616215-60616234 | None:intergenic | 30.0% | |
| TTGTAATCATTGCCATTGTT+TGG | - | chr5.1:60615575-60615594 | None:intergenic | 30.0% | |
| TTTATCACACATGTTTGGAT+CGG | + | chr5.1:60614615-60614634 | MS.gene78530:intron | 30.0% | |
| ! | GAGAAGATTCAAACTTTTGT+CGG | + | chr5.1:60613951-60613970 | MS.gene78530:CDS | 30.0% |
| ! | TGCTTGATGTATAGAGTTTT+TGG | + | chr5.1:60614207-60614226 | MS.gene78530:intron | 30.0% |
| ! | TGGTTTAAGACCAAAACATT+TGG | - | chr5.1:60613103-60613122 | None:intergenic | 30.0% |
| ! | TTCAGCTGATATTGTTTTCT+CGG | - | chr5.1:60615238-60615257 | None:intergenic | 30.0% |
| !! | AGAGGAAGTATTGATCAAAA+TGG | + | chr5.1:60614010-60614029 | MS.gene78530:CDS | 30.0% |
| !!! | ATAGGATTGGTTTTATTCCA+TGG | + | chr5.1:60613340-60613359 | MS.gene78530:CDS | 30.0% |
| AAGAAGAACAATTGGTTGCT+TGG | + | chr5.1:60616175-60616194 | MS.gene78530:CDS | 35.0% | |
| AAGATCAACTGACAGTTCAT+CGG | - | chr5.1:60615877-60615896 | None:intergenic | 35.0% | |
| AAGCAACCAATTGTTCTTCT+TGG | - | chr5.1:60616176-60616195 | None:intergenic | 35.0% | |
| ACAGATAAGGAGGGTAAATT+TGG | - | chr5.1:60613440-60613459 | None:intergenic | 35.0% | |
| ACTCATTTGGTATGAGACAT+AGG | + | chr5.1:60613322-60613341 | MS.gene78530:CDS | 35.0% | |
| AGAATTGAGTGCTTCACAAT+TGG | - | chr5.1:60615115-60615134 | None:intergenic | 35.0% | |
| AGATCATGATCATGATGAAG+AGG | + | chr5.1:60613575-60613594 | MS.gene78530:CDS | 35.0% | |
| ATCAGCTGAAAAAATTGAGG+AGG | + | chr5.1:60615248-60615267 | MS.gene78530:CDS | 35.0% | |
| ATCCGACAATGACAGAAATT+TGG | + | chr5.1:60614465-60614484 | MS.gene78530:CDS | 35.0% | |
| CAAACTTGAACTCTGATGAA+AGG | + | chr5.1:60613679-60613698 | MS.gene78530:CDS | 35.0% | |
| CAATCTCCAAGAAGAACAAT+TGG | + | chr5.1:60616167-60616186 | MS.gene78530:CDS | 35.0% | |
| CAATGTGAAACCTGCATAAT+AGG | - | chr5.1:60613777-60613796 | None:intergenic | 35.0% | |
| CAGAAATTTGGAAGCAGATA+TGG | + | chr5.1:60614477-60614496 | MS.gene78530:CDS | 35.0% | |
| CCATCAATCATCAAAATGCT+CGG | + | chr5.1:60615278-60615297 | MS.gene78530:CDS | 35.0% | |
| GATCATTGTCCAAGTTCTTA+AGG | - | chr5.1:60616520-60616539 | None:intergenic | 35.0% | |
| GTTAGAAACGGTATCATCAT+TGG | - | chr5.1:60615931-60615950 | None:intergenic | 35.0% | |
| TAGCATGTGTGAAAATTGCT+TGG | + | chr5.1:60613269-60613288 | MS.gene78530:CDS | 35.0% | |
| TAGTTTCCATCATACCAAGA+AGG | - | chr5.1:60613468-60613487 | None:intergenic | 35.0% | |
| TATCTCCTCCAAGTTAGAAA+CGG | - | chr5.1:60615943-60615962 | None:intergenic | 35.0% | |
| TGAATCATGCAAATCGAATG+AGG | + | chr5.1:60613911-60613930 | MS.gene78530:CDS | 35.0% | |
| TGAATTACGCCTTAAGAACT+TGG | + | chr5.1:60616508-60616527 | MS.gene78530:CDS | 35.0% | |
| TGATGATACCGTTTCTAACT+TGG | + | chr5.1:60615932-60615951 | MS.gene78530:CDS | 35.0% | |
| TGTATGGGATCCATACAAAA+TGG | + | chr5.1:60616422-60616441 | MS.gene78530:CDS | 35.0% | |
| TGTTTACCTTGTGCATTATC+TGG | - | chr5.1:60614182-60614201 | None:intergenic | 35.0% | |
| TGTTTCTCATGACTTAACCA+TGG | - | chr5.1:60613360-60613379 | None:intergenic | 35.0% | |
| TTTGGTATGAGACATAGGAT+TGG | + | chr5.1:60613327-60613346 | MS.gene78530:CDS | 35.0% | |
| ! | AGAAGGAATTGGAAGAGTAT+AGG | + | chr5.1:60615739-60615758 | MS.gene78530:CDS | 35.0% |
| ! | AGATCAACTCAAAGCATTAG+AGG | + | chr5.1:60616040-60616059 | MS.gene78530:CDS | 35.0% |
| ! | ATACAAAATGGTGGTGATGA+AGG | + | chr5.1:60616434-60616453 | MS.gene78530:CDS | 35.0% |
| ! | CTCTTTGAGAAAACAGAATC+AGG | + | chr5.1:60615384-60615403 | MS.gene78530:CDS | 35.0% |
| ! | GAAAGTGTGTATTGAAGAAG+AGG | + | chr5.1:60616340-60616359 | MS.gene78530:CDS | 35.0% |
| ! | GAAGGAATTGGAAGAGTATA+GGG | + | chr5.1:60615740-60615759 | MS.gene78530:CDS | 35.0% |
| ! | GTTGGTGTTTCTATGTAACA+TGG | - | chr5.1:60612983-60613002 | None:intergenic | 35.0% |
| ! | TGCAACTTAACTATAGTGGA+TGG | - | chr5.1:60616542-60616561 | None:intergenic | 35.0% |
| ! | TTCATCACCACCATTTTGTA+TGG | - | chr5.1:60616435-60616454 | None:intergenic | 35.0% |
| !! | TGAAAGTTTTATCCTCAGAG+AGG | + | chr5.1:60613629-60613648 | MS.gene78530:CDS | 35.0% |
| AAGCTTGTGACGATGATGAT+CGG | + | chr5.1:60613844-60613863 | MS.gene78530:CDS | 40.0% | |
| AAGGCTTCAACAGATAAGGA+GGG | - | chr5.1:60613449-60613468 | None:intergenic | 40.0% | |
| AGAGAAGCAAGAACTTGAGA+AGG | + | chr5.1:60615722-60615741 | MS.gene78530:CDS | 40.0% | |
| AGCCTTGAACAGAAAAGACA+AGG | - | chr5.1:60613126-60613145 | None:intergenic | 40.0% | |
| ATAAACTTCCCGAAACTCCT+AGG | + | chr5.1:60615322-60615341 | MS.gene78530:CDS | 40.0% | |
| ATCTTCTTCAAGTGACAGTG+AGG | + | chr5.1:60614987-60615006 | MS.gene78530:CDS | 40.0% | |
| ATGGGATCCATACAAAATGG+TGG | + | chr5.1:60616425-60616444 | MS.gene78530:CDS | 40.0% | |
| CAAATCGAATGAGGATCTAG+AGG | + | chr5.1:60613920-60613939 | MS.gene78530:CDS | 40.0% | |
| CAAGAAGGCTTCAACAGATA+AGG | - | chr5.1:60613453-60613472 | None:intergenic | 40.0% | |
| CTTATCTGTTGAAGCCTTCT+TGG | + | chr5.1:60613451-60613470 | MS.gene78530:CDS | 40.0% | |
| CTTGAACAGAAAAGACAAGG+TGG | - | chr5.1:60613123-60613142 | None:intergenic | 40.0% | |
| CTTGCTCTTCCATCATTCTT+TGG | - | chr5.1:60615644-60615663 | None:intergenic | 40.0% | |
| GAAGAACCAGATAATGCACA+AGG | + | chr5.1:60614173-60614192 | MS.gene78530:CDS | 40.0% | |
| GAGTGCTTCACAATTGGATA+TGG | - | chr5.1:60615109-60615128 | None:intergenic | 40.0% | |
| GATGAGAGCTCATCAAGATA+TGG | + | chr5.1:60616101-60616120 | MS.gene78530:CDS | 40.0% | |
| GATGGAGCTTGAAGAAAGTT+TGG | + | chr5.1:60614058-60614077 | MS.gene78530:CDS | 40.0% | |
| GCAAGAACTTGAGAAGGAAT+TGG | + | chr5.1:60615728-60615747 | MS.gene78530:CDS | 40.0% | |
| GGATGCAGAAAAAGATGAGA+AGG | + | chr5.1:60613701-60613720 | MS.gene78530:CDS | 40.0% | |
| GTATGGATCCCATACAATGT+TGG | - | chr5.1:60616418-60616437 | None:intergenic | 40.0% | |
| GTGAAAATTGCTTGGCTTCT+AGG | + | chr5.1:60613277-60613296 | MS.gene78530:CDS | 40.0% | |
| TCTTGTTCTTGTTGCAACAC+CGG | + | chr5.1:60615846-60615865 | MS.gene78530:CDS | 40.0% | |
| TGAGGTAGAATACAGTGATC+CGG | + | chr5.1:60615440-60615459 | MS.gene78530:CDS | 40.0% | |
| TGATACCGTTTCTAACTTGG+AGG | + | chr5.1:60615935-60615954 | MS.gene78530:CDS | 40.0% | |
| TGCACACAAGAAGATGAATC+TGG | + | chr5.1:60614358-60614377 | MS.gene78530:CDS | 40.0% | |
| TTCTGATGCTCCTATTATGC+AGG | + | chr5.1:60613764-60613783 | MS.gene78530:CDS | 40.0% | |
| TTGAAGCCTTCTTGGTATGA+TGG | + | chr5.1:60613459-60613478 | MS.gene78530:CDS | 40.0% | |
| ! | AAATGGTGGTGATGAAGGAA+AGG | + | chr5.1:60616439-60616458 | MS.gene78530:CDS | 40.0% |
| ! | AGCTCTTTGTTCGGCTTTTA+GGG | - | chr5.1:60615493-60615512 | None:intergenic | 40.0% |
| ! | CACCTTGTCTTTTCTGTTCA+AGG | + | chr5.1:60613121-60613140 | MS.gene78530:intron | 40.0% |
| ! | TGGATCAAGTGATGATGATG+AGG | + | chr5.1:60614378-60614397 | MS.gene78530:CDS | 40.0% |
| !! | AAGTTTTATCCTCAGAGAGG+TGG | + | chr5.1:60613632-60613651 | MS.gene78530:CDS | 40.0% |
| !! | ATCCGGTTTTAACAATCGAC+CGG | + | chr5.1:60615457-60615476 | MS.gene78530:CDS | 40.0% |
| !! | ATGCATTGACTTGAGTAGGT+TGG | - | chr5.1:60614955-60614974 | None:intergenic | 40.0% |
| !! | CCGAGCATTTTGATGATTGA+TGG | - | chr5.1:60615281-60615300 | None:intergenic | 40.0% |
| !! | CTTTTAGGGATGCTTTTAGC+CGG | - | chr5.1:60615479-60615498 | None:intergenic | 40.0% |
| !! | TGACATGCATTGACTTGAGT+AGG | - | chr5.1:60614959-60614978 | None:intergenic | 40.0% |
| !! | TGCATTATCTGGTTCTTCTG+TGG | - | chr5.1:60614171-60614190 | None:intergenic | 40.0% |
| AACTGAACTCGATCGATCCT+CGG | - | chr5.1:60613658-60613677 | None:intergenic | 45.0% | |
| AGCCGGTCGATTGTTAAAAC+CGG | - | chr5.1:60615462-60615481 | None:intergenic | 45.0% | |
| ATCGAATGAGGATCTAGAGG+AGG | + | chr5.1:60613923-60613942 | MS.gene78530:CDS | 45.0% | |
| ATCTGCTGACCTAGGAGTTT+CGG | - | chr5.1:60615334-60615353 | None:intergenic | 45.0% | |
| ATGCAATGCACTACATGCAG+AGG | + | chr5.1:60615352-60615371 | MS.gene78530:CDS | 45.0% | |
| GAACAAGAAAATGCTCCACC+AGG | + | chr5.1:60614502-60614521 | MS.gene78530:CDS | 45.0% | |
| GAAGGCTTCAACAGATAAGG+AGG | - | chr5.1:60613450-60613469 | None:intergenic | 45.0% | |
| GATGATTTGAGCAGTAGCCA+AGG | - | chr5.1:60613230-60613249 | None:intergenic | 45.0% | |
| GCAGCTGAGATTTCAAACCT+TGG | + | chr5.1:60613210-60613229 | MS.gene78530:CDS | 45.0% | |
| TACAAGGCTGCAGGAAGAAA+AGG | + | chr5.1:60615590-60615609 | MS.gene78530:CDS | 45.0% | |
| TCGAATGAGGATCTAGAGGA+GGG | + | chr5.1:60613924-60613943 | MS.gene78530:CDS | 45.0% | |
| TTGGTTAGTAGCTATTGCCG+AGG | - | chr5.1:60615556-60615575 | None:intergenic | 45.0% | |
| ! | AGCACTGAGAGCTCTTTGTT+CGG | - | chr5.1:60615502-60615521 | None:intergenic | 45.0% |
| ! | AGGTTGATCGCGTTTATGAC+AGG | + | chr5.1:60616360-60616379 | MS.gene78530:CDS | 45.0% |
| ! | GAGCTCTTTGTTCGGCTTTT+AGG | - | chr5.1:60615494-60615513 | None:intergenic | 45.0% |
| !! | AGAAGAAGAGAGAAGTGCCT+CGG | + | chr5.1:60615536-60615555 | MS.gene78530:CDS | 45.0% |
| !! | GAGTAGGTTGGTTCTTCAGA+TGG | - | chr5.1:60614943-60614962 | None:intergenic | 45.0% |
| !! | TAGGTTGGTTCTTCAGATGG+AGG | - | chr5.1:60614940-60614959 | None:intergenic | 45.0% |
| !! | TCTTCTAAGACGCTTGACTG+CGG | - | chr5.1:60613993-60614012 | None:intergenic | 45.0% |
| AAGGCTGCAGGAAGAAAAGG+CGG | + | chr5.1:60615593-60615612 | MS.gene78530:CDS | 50.0% | |
| ACTTGCAACGCTACCATCCA+CGG | - | chr5.1:60615421-60615440 | None:intergenic | 50.0% | |
| AGAAAAGGCGGCAATGCAGA+TGG | + | chr5.1:60615605-60615624 | MS.gene78530:CDS | 50.0% | |
| ATCAGGAGCAGAAGAATCCG+TGG | + | chr5.1:60615401-60615420 | MS.gene78530:CDS | 50.0% | |
| CCAGGTACAAAGACAGTGCA+TGG | + | chr5.1:60614520-60614539 | MS.gene78530:intron | 50.0% | |
| CCATGCACTGTCTTTGTACC+TGG | - | chr5.1:60614523-60614542 | None:intergenic | 50.0% | |
| CGAATGAGGATCTAGAGGAG+GGG | + | chr5.1:60613925-60613944 | MS.gene78530:CDS | 50.0% | |
| GCAGTCAAGCGTCTTAGAAG+AGG | + | chr5.1:60613992-60614011 | MS.gene78530:CDS | 50.0% | |
| GGCAATGATTACAAGGCTGC+AGG | + | chr5.1:60615581-60615600 | MS.gene78530:CDS | 50.0% | |
| TCTGCTGACCTAGGAGTTTC+GGG | - | chr5.1:60615333-60615352 | None:intergenic | 50.0% | |
| TGACAGTTCATCGGTGTAGC+CGG | - | chr5.1:60615868-60615887 | None:intergenic | 50.0% | |
| TGCACTGTCTTTGTACCTGG+TGG | - | chr5.1:60614520-60614539 | None:intergenic | 50.0% | |
| TGCATTGCATCTGCTGACCT+AGG | - | chr5.1:60615342-60615361 | None:intergenic | 50.0% | |
| ACGCTTGACTGCGGTTCAAC+TGG | - | chr5.1:60613984-60614003 | None:intergenic | 55.0% | |
| GGAGCAGAAGAATCCGTGGA+TGG | + | chr5.1:60615405-60615424 | MS.gene78530:CDS | 55.0% | |
| TGAGGATCTAGAGGAGGGGA+AGG | + | chr5.1:60613929-60613948 | MS.gene78530:CDS | 55.0% | |
| ! | GGATGGTAGCGTTGCAAGTG+AGG | + | chr5.1:60615422-60615441 | MS.gene78530:CDS | 55.0% |
| TATCCTCAGAGAGGTGGCCG+AGG | + | chr5.1:60613638-60613657 | MS.gene78530:CDS | 60.0% | |
| GATCCTCGGCCACCTCTCTG+AGG | - | chr5.1:60613644-60613663 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 60612958 | 60616583 | 60612958 | ID=MS.gene78530 |
| chr5.1 | mRNA | 60612958 | 60616583 | 60612958 | ID=MS.gene78530.t1;Parent=MS.gene78530 |
| chr5.1 | exon | 60612958 | 60613022 | 60612958 | ID=MS.gene78530.t1.exon1;Parent=MS.gene78530.t1 |
| chr5.1 | CDS | 60612958 | 60613022 | 60612958 | ID=cds.MS.gene78530.t1;Parent=MS.gene78530.t1 |
| chr5.1 | exon | 60613143 | 60614194 | 60613143 | ID=MS.gene78530.t1.exon2;Parent=MS.gene78530.t1 |
| chr5.1 | CDS | 60613143 | 60614194 | 60613143 | ID=cds.MS.gene78530.t1;Parent=MS.gene78530.t1 |
| chr5.1 | exon | 60614317 | 60614523 | 60614317 | ID=MS.gene78530.t1.exon3;Parent=MS.gene78530.t1 |
| chr5.1 | CDS | 60614317 | 60614523 | 60614317 | ID=cds.MS.gene78530.t1;Parent=MS.gene78530.t1 |
| chr5.1 | exon | 60614929 | 60615063 | 60614929 | ID=MS.gene78530.t1.exon4;Parent=MS.gene78530.t1 |
| chr5.1 | CDS | 60614929 | 60615063 | 60614929 | ID=cds.MS.gene78530.t1;Parent=MS.gene78530.t1 |
| chr5.1 | exon | 60615199 | 60616583 | 60615199 | ID=MS.gene78530.t1.exon5;Parent=MS.gene78530.t1 |
| chr5.1 | CDS | 60615199 | 60616583 | 60615199 | ID=cds.MS.gene78530.t1;Parent=MS.gene78530.t1 |
| Gene Sequence |
| Protein sequence |
