Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79439.t1 | XP_013459094.1 | 92.9 | 268 | 19 | 0 | 1 | 268 | 1 | 268 | 2.20E-132 | 481.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79439.t1 | Q2V3H0 | 68.4 | 228 | 68 | 1 | 45 | 268 | 50 | 277 | 6.2e-83 | 308.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79439.t1 | A0A072UU22 | 92.9 | 268 | 19 | 0 | 1 | 268 | 1 | 268 | 1.6e-132 | 481.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049151 | MS.gene79439 | 0.808701 | 2.72E-50 | -1.69E-46 |
| MS.gene049297 | MS.gene79439 | 0.800239 | 1.58E-48 | -1.69E-46 |
| MS.gene049378 | MS.gene79439 | 0.806113 | 9.63E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene79439 | 0.847105 | 1.43E-59 | -1.69E-46 |
| MS.gene049910 | MS.gene79439 | 0.80104 | 1.09E-48 | -1.69E-46 |
| MS.gene050226 | MS.gene79439 | 0.819547 | 1.10E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene79439 | 0.834785 | 2.45E-56 | -1.69E-46 |
| MS.gene050228 | MS.gene79439 | 0.82657 | 2.52E-54 | -1.69E-46 |
| MS.gene050330 | MS.gene79439 | -0.832141 | 1.12E-55 | -1.69E-46 |
| MS.gene050438 | MS.gene79439 | 0.8231 | 1.66E-53 | -1.69E-46 |
| MS.gene050558 | MS.gene79439 | 0.850891 | 1.27E-60 | -1.69E-46 |
| MS.gene050623 | MS.gene79439 | -0.811631 | 6.36E-51 | -1.69E-46 |
| MS.gene050642 | MS.gene79439 | 0.80105 | 1.08E-48 | -1.69E-46 |
| MS.gene050719 | MS.gene79439 | 0.822681 | 2.08E-53 | -1.69E-46 |
| MS.gene050721 | MS.gene79439 | 0.823719 | 1.19E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene79439 | 0.832722 | 8.04E-56 | -1.69E-46 |
| MS.gene050820 | MS.gene79439 | 0.816355 | 5.77E-52 | -1.69E-46 |
| MS.gene050824 | MS.gene79439 | 0.818101 | 2.34E-52 | -1.69E-46 |
| MS.gene05119 | MS.gene79439 | -0.801548 | 8.55E-49 | -1.69E-46 |
| MS.gene051663 | MS.gene79439 | 0.805981 | 1.03E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene79439 | 0.821162 | 4.67E-53 | -1.69E-46 |
| MS.gene052302 | MS.gene79439 | 0.808671 | 2.76E-50 | -1.69E-46 |
| MS.gene052376 | MS.gene79439 | 0.817457 | 3.26E-52 | -1.69E-46 |
| MS.gene052858 | MS.gene79439 | 0.801454 | 8.94E-49 | -1.69E-46 |
| MS.gene052860 | MS.gene79439 | 0.801998 | 6.91E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene79439 | 0.852786 | 3.67E-61 | -1.69E-46 |
| MS.gene054473 | MS.gene79439 | 0.817136 | 3.86E-52 | -1.69E-46 |
| MS.gene054667 | MS.gene79439 | 0.808343 | 3.24E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene79439 | 0.81321 | 2.87E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene79439 | 0.818587 | 1.81E-52 | -1.69E-46 |
| MS.gene054983 | MS.gene79439 | 0.803218 | 3.87E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene79439 | 0.801983 | 6.96E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene79439 | -0.815748 | 7.88E-52 | -1.69E-46 |
| MS.gene056875 | MS.gene79439 | 0.813734 | 2.20E-51 | -1.69E-46 |
| MS.gene057121 | MS.gene79439 | 0.844567 | 6.98E-59 | -1.69E-46 |
| MS.gene057260 | MS.gene79439 | 0.811313 | 7.45E-51 | -1.69E-46 |
| MS.gene057469 | MS.gene79439 | 0.801969 | 7.01E-49 | -1.69E-46 |
| MS.gene057967 | MS.gene79439 | 0.805999 | 1.02E-49 | -1.69E-46 |
| MS.gene058168 | MS.gene79439 | 0.807044 | 6.13E-50 | -1.69E-46 |
| MS.gene058182 | MS.gene79439 | 0.801975 | 6.99E-49 | -1.69E-46 |
| MS.gene059124 | MS.gene79439 | 0.803135 | 4.03E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene79439 | 0.824171 | 9.33E-54 | -1.69E-46 |
| MS.gene060476 | MS.gene79439 | 0.810077 | 1.38E-50 | -1.69E-46 |
| MS.gene060480 | MS.gene79439 | 0.800816 | 1.21E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79439.t1 | MTR_3g024400 | 92.910 | 268 | 19 | 0 | 1 | 268 | 1 | 268 | 7.05e-174 | 482 |
| MS.gene79439.t1 | MTR_3g024400 | 76.119 | 268 | 16 | 1 | 1 | 268 | 1 | 220 | 8.17e-129 | 366 |
| MS.gene79439.t1 | MTR_6g053090 | 46.117 | 206 | 108 | 2 | 76 | 281 | 92 | 294 | 1.11e-52 | 176 |
| MS.gene79439.t1 | MTR_5g012120 | 43.871 | 155 | 86 | 1 | 101 | 254 | 5 | 159 | 1.95e-38 | 134 |
| MS.gene79439.t1 | MTR_5g012120 | 42.771 | 166 | 93 | 2 | 90 | 254 | 72 | 236 | 3.29e-38 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79439.t1 | AT4G18975 | 62.308 | 260 | 87 | 3 | 20 | 268 | 18 | 277 | 2.05e-112 | 327 |
| MS.gene79439.t1 | AT4G18975 | 62.308 | 260 | 87 | 3 | 20 | 268 | 18 | 277 | 2.05e-112 | 327 |
| MS.gene79439.t1 | AT4G18975 | 62.308 | 260 | 87 | 3 | 20 | 268 | 18 | 277 | 2.05e-112 | 327 |
| MS.gene79439.t1 | AT4G18975 | 73.762 | 202 | 53 | 0 | 67 | 268 | 49 | 250 | 1.17e-111 | 324 |
| MS.gene79439.t1 | AT4G21190 | 42.925 | 212 | 113 | 2 | 76 | 286 | 45 | 249 | 1.68e-52 | 174 |
| MS.gene79439.t1 | AT1G04590 | 35.681 | 213 | 135 | 2 | 44 | 254 | 100 | 312 | 6.48e-36 | 133 |
| MS.gene79439.t1 | AT1G04590 | 35.648 | 216 | 134 | 3 | 44 | 254 | 100 | 315 | 2.10e-34 | 129 |
Find 72 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGAATATACTTCCATTTA+AGG | 0.114121 | 3.1:+15730750 | None:intergenic |
| ACTTCTTCTGGCATTTGATA+TGG | 0.235335 | 3.1:-15731377 | MS.gene79439:CDS |
| AATGAGAAAGAGGCTGTTTA+TGG | 0.250949 | 3.1:-15732237 | MS.gene79439:CDS |
| TAAACAGCCTCTTTCTCATT+AGG | 0.256749 | 3.1:+15732240 | None:intergenic |
| ATGTCCTTCGTAGGAGTATT+GGG | 0.290776 | 3.1:+15734990 | None:intergenic |
| TCAAACGATATGGCCTTAAA+TGG | 0.299839 | 3.1:-15730763 | MS.gene79439:CDS |
| GCAGATGACAATAATTTATT+CGG | 0.316056 | 3.1:+15734859 | None:intergenic |
| CCAAGAAGAGAAAAGGAAAT+TGG | 0.335972 | 3.1:-15730789 | MS.gene79439:CDS |
| TTTCGATCGGACAACTTTGC+AGG | 0.343686 | 3.1:+15734712 | None:intergenic |
| AAACAGCCTCTTTCTCATTA+GGG | 0.352186 | 3.1:+15732241 | None:intergenic |
| TGACAAGAGTGAGTGCCTTT+TGG | 0.368397 | 3.1:+15734493 | None:intergenic |
| TTCCTGACTGTATCTTCATC+AGG | 0.368904 | 3.1:+15730839 | None:intergenic |
| TGCAGACATGGAAGAGTTGC+GGG | 0.371697 | 3.1:-15730867 | MS.gene79439:CDS |
| AACATACGACACACTTCTTC+TGG | 0.373920 | 3.1:-15731389 | MS.gene79439:CDS |
| CATGTCCTTCGTAGGAGTAT+TGG | 0.390457 | 3.1:+15734989 | None:intergenic |
| GCCTTAGCTACTGCAATCAA+TGG | 0.402188 | 3.1:+15732177 | None:intergenic |
| AAATTGGTAATCAAACGATA+TGG | 0.420660 | 3.1:-15730773 | MS.gene79439:CDS |
| TTTATGGAGCGTTAGACAAA+TGG | 0.429545 | 3.1:-15732221 | MS.gene79439:CDS |
| CGTTAGACAAATGGACGGCC+TGG | 0.441130 | 3.1:-15732212 | MS.gene79439:CDS |
| TTCGTTAAAGTTGAGTCGAT+TGG | 0.448565 | 3.1:-15730551 | MS.gene79439:CDS |
| TCGTTAAAGTTGAGTCGATT+GGG | 0.457325 | 3.1:-15730550 | MS.gene79439:CDS |
| CCCATTGATTGCAGTAGCTA+AGG | 0.457671 | 3.1:-15732178 | MS.gene79439:CDS |
| TGGAAGTATATTCACTTCAA+TGG | 0.460351 | 3.1:-15730743 | MS.gene79439:CDS |
| AACTAGGCCAAGAAGAGAAA+AGG | 0.461313 | 3.1:-15730796 | MS.gene79439:CDS |
| TTCTGCCGTTGTTGAATCAA+AGG | 0.474900 | 3.1:-15730599 | MS.gene79439:CDS |
| TATTCACTTCAATGGTGAAC+GGG | 0.477233 | 3.1:-15730735 | MS.gene79439:intron |
| TTCAGCTCAGTCTGGCCAAA+AGG | 0.482032 | 3.1:-15734508 | MS.gene79439:CDS |
| AAAGGACAAGGAGCAACAAT+GGG | 0.484217 | 3.1:-15731412 | MS.gene79439:CDS |
| GGTTCTCGGGAAACGAAGTC+GGG | 0.487552 | 3.1:+15730523 | None:intergenic |
| TCCTTTGCTCAACATCCACT+TGG | 0.488600 | 3.1:+15731429 | None:intergenic |
| AGAAGATATTCAGCTCAGTC+TGG | 0.491796 | 3.1:-15734516 | MS.gene79439:CDS |
| ACAGAACCACCAACAACATT+CGG | 0.497678 | 3.1:+15734683 | None:intergenic |
| ACTCCTACGAAGGACATGTT+TGG | 0.501980 | 3.1:-15734984 | MS.gene79439:intron |
| TGGTTCTCGGGAAACGAAGT+CGG | 0.507284 | 3.1:+15730522 | None:intergenic |
| GTTAGACAAATGGACGGCCT+GGG | 0.515804 | 3.1:-15732211 | MS.gene79439:CDS |
| GCAAGGGCCTTTAGAAAACT+AGG | 0.517052 | 3.1:-15730812 | MS.gene79439:CDS |
| TGAACTCCCTAATGAGAAAG+AGG | 0.519498 | 3.1:-15732247 | MS.gene79439:CDS |
| CTTAAGGAAAAGGGCTCAGT+GGG | 0.521402 | 3.1:-15732145 | MS.gene79439:CDS |
| AATATCTTCTTTGCCACAAG+TGG | 0.521445 | 3.1:+15734529 | None:intergenic |
| CAAAGGACAAGGAGCAACAA+TGG | 0.533105 | 3.1:-15731413 | MS.gene79439:CDS |
| CCTTAGCTACTGCAATCAAT+GGG | 0.533642 | 3.1:+15732178 | None:intergenic |
| TGTTGGTGGTTCTGTTGAGA+AGG | 0.534069 | 3.1:-15734675 | MS.gene79439:CDS |
| AAATTGAGTCCGAATGTTGT+TGG | 0.537190 | 3.1:-15734692 | MS.gene79439:CDS |
| TCTGCCGTTGTTGAATCAAA+GGG | 0.543247 | 3.1:-15730598 | MS.gene79439:CDS |
| TCTGCCAGATAAAATTATAG+AGG | 0.547684 | 3.1:-15731242 | MS.gene79439:intron |
| AGTTTAGGTATTTGCAGACA+TGG | 0.549972 | 3.1:-15730879 | MS.gene79439:intron |
| TCTTAGACACAGAGCGCATG+TGG | 0.553949 | 3.1:+15731305 | None:intergenic |
| AACCTGATGAAGATACAGTC+AGG | 0.560887 | 3.1:-15730841 | MS.gene79439:CDS |
| TGCAATAAGTATCACTCCAA+AGG | 0.563200 | 3.1:-15734839 | MS.gene79439:intron |
| CAATGGGAACTCTATTTCCC+AGG | 0.564369 | 3.1:+15732194 | None:intergenic |
| TTGCAGACATGGAAGAGTTG+CGG | 0.564389 | 3.1:-15730868 | MS.gene79439:CDS |
| TTGAGTCCGAATGTTGTTGG+TGG | 0.569060 | 3.1:-15734689 | MS.gene79439:CDS |
| TACAGTCAGGAAAGTGGCAA+GGG | 0.586980 | 3.1:-15730828 | MS.gene79439:CDS |
| TTTCCCCAATACTCCTACGA+AGG | 0.587315 | 3.1:-15734994 | MS.gene79439:CDS |
| AATCAAAGGGTCGAGTGCAA+AGG | 0.592567 | 3.1:-15730585 | MS.gene79439:CDS |
| TGAAGATACAGTCAGGAAAG+TGG | 0.595011 | 3.1:-15730834 | MS.gene79439:CDS |
| ATATTCACTTCAATGGTGAA+CGG | 0.595717 | 3.1:-15730736 | MS.gene79439:CDS |
| TATGGAACAGAGAGTAGATG+AGG | 0.602182 | 3.1:-15731359 | MS.gene79439:CDS |
| CATTCGGACTCAATTTCGAT+CGG | 0.609071 | 3.1:+15734699 | None:intergenic |
| ATACAGTCAGGAAAGTGGCA+AGG | 0.618340 | 3.1:-15730829 | MS.gene79439:CDS |
| TATACTTTCAGTTAGCCAAG+TGG | 0.620511 | 3.1:-15731444 | MS.gene79439:intron |
| TAGATGAGGCAGAATCCTTG+TGG | 0.623540 | 3.1:-15731345 | MS.gene79439:CDS |
| TCTTAAGGAAAAGGGCTCAG+TGG | 0.626223 | 3.1:-15732146 | MS.gene79439:CDS |
| GCCAAGTGGATGTTGAGCAA+AGG | 0.633935 | 3.1:-15731430 | MS.gene79439:CDS |
| TGGATGTTGAGCAAAGGACA+AGG | 0.634699 | 3.1:-15731424 | MS.gene79439:CDS |
| GTAAGATAGAACACCACTTG+TGG | 0.639683 | 3.1:-15734542 | MS.gene79439:CDS |
| TTACCAAACATGTCCTTCGT+AGG | 0.651049 | 3.1:+15734981 | None:intergenic |
| TGTCCTTCGTAGGAGTATTG+GGG | 0.658780 | 3.1:+15734991 | None:intergenic |
| ATGTATAATCATATTCCACA+AGG | 0.667188 | 3.1:+15731330 | None:intergenic |
| TGGAGCGTTAGACAAATGGA+CGG | 0.671710 | 3.1:-15732217 | MS.gene79439:CDS |
| TCGACCCTTTGATTCAACAA+CGG | 0.680404 | 3.1:+15730594 | None:intergenic |
| CTTAGACACAGAGCGCATGT+GGG | 0.683166 | 3.1:+15731306 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTAAATCTGATAAAAATT+TGG | - | chr3.1:15734457-15734476 | MS.gene79439:intron | 10.0% |
| !! | TTTAAAAATCTTAAGGAAAA+GGG | - | chr3.1:15733381-15733400 | MS.gene79439:intron | 15.0% |
| !!! | TGCTTTATTTATAACATATA+TGG | - | chr3.1:15733666-15733685 | MS.gene79439:intron | 15.0% |
| !! | AAATCAAATAAAGTCATGTA+TGG | + | chr3.1:15731305-15731324 | None:intergenic | 20.0% |
| !! | AGATTTATTTAATACAAGGA+TGG | - | chr3.1:15732757-15732776 | MS.gene79439:intron | 20.0% |
| !! | ATATGAAATTCATGAATTCA+TGG | - | chr3.1:15733987-15734006 | MS.gene79439:intron | 20.0% |
| !! | ATTATGAATGACATTGAAAT+CGG | - | chr3.1:15734854-15734873 | MS.gene79439:CDS | 20.0% |
| !! | GATTAAAAAGTTTCTGATTT+GGG | - | chr3.1:15731927-15731946 | MS.gene79439:intron | 20.0% |
| !! | GCTAAGATTTATTTAATACA+AGG | - | chr3.1:15732753-15732772 | MS.gene79439:intron | 20.0% |
| !! | TAAGATTAAACAGTAAAAGA+AGG | + | chr3.1:15731876-15731895 | None:intergenic | 20.0% |
| !! | TATAAAGAAAGCTAATTTAC+TGG | + | chr3.1:15733088-15733107 | None:intergenic | 20.0% |
| !! | TCATATAACTGTTTATGTTA+TGG | - | chr3.1:15731325-15731344 | MS.gene79439:CDS | 20.0% |
| !! | TGATTAAAAAGTTTCTGATT+TGG | - | chr3.1:15731926-15731945 | MS.gene79439:intron | 20.0% |
| !! | TTTATAACATATATGGTTTG+AGG | - | chr3.1:15733673-15733692 | MS.gene79439:intron | 20.0% |
| !!! | AAATGTTGTTTCAACTTTTA+TGG | - | chr3.1:15733731-15733750 | MS.gene79439:intron | 20.0% |
| !!! | AAATTAGCTTTCTTTATATC+TGG | - | chr3.1:15733090-15733109 | MS.gene79439:intron | 20.0% |
| !!! | AACAGATTTAGGATTATATA+TGG | - | chr3.1:15731717-15731736 | MS.gene79439:intron | 20.0% |
| !!! | CTTTAAAAATCTTAAGGAAA+AGG | - | chr3.1:15733380-15733399 | MS.gene79439:intron | 20.0% |
| !!! | TATTTTCTGTAATTTGTGTA+TGG | - | chr3.1:15731155-15731174 | MS.gene79439:intron | 20.0% |
| ! | AAATAACAGTATAGGATATG+TGG | - | chr3.1:15731465-15731484 | MS.gene79439:intron | 25.0% |
| ! | AACACTATAATATGTAGCTT+AGG | + | chr3.1:15731126-15731145 | None:intergenic | 25.0% |
| ! | AACTATACCAGAATTTGATA+TGG | - | chr3.1:15731491-15731510 | MS.gene79439:intron | 25.0% |
| ! | AAGCTACATATTATAGTGTT+AGG | - | chr3.1:15731126-15731145 | MS.gene79439:intron | 25.0% |
| ! | AGCAAAGTAATCTGTATTAA+CGG | - | chr3.1:15733623-15733642 | MS.gene79439:intron | 25.0% |
| ! | AGTGAATATACTTCCATTTA+AGG | + | chr3.1:15734788-15734807 | None:intergenic | 25.0% |
| ! | ATAAGTACTTAAATCCAAAC+TGG | + | chr3.1:15733759-15733778 | None:intergenic | 25.0% |
| ! | ATGCTGTAATGTAAAAAAAG+AGG | - | chr3.1:15733050-15733069 | MS.gene79439:intron | 25.0% |
| ! | ATGTATAATCATATTCCACA+AGG | + | chr3.1:15734208-15734227 | None:intergenic | 25.0% |
| ! | ATTCAAGCATATATTGCAAA+AGG | + | chr3.1:15733032-15733051 | None:intergenic | 25.0% |
| ! | CATGTAGTAAATAACAGTAT+AGG | - | chr3.1:15731457-15731476 | MS.gene79439:intron | 25.0% |
| ! | GCAGATGACAATAATTTATT+CGG | + | chr3.1:15730679-15730698 | None:intergenic | 25.0% |
| ! | TAAAATGAATGATTGTTTGC+TGG | - | chr3.1:15733590-15733609 | MS.gene79439:intron | 25.0% |
| ! | TAAACACTAAAGGAGAATAT+TGG | + | chr3.1:15732673-15732692 | None:intergenic | 25.0% |
| ! | TCTATCACTAAAAATCTCAT+TGG | + | chr3.1:15732148-15732167 | None:intergenic | 25.0% |
| ! | TTTATCACACATCTTAGAAT+TGG | - | chr3.1:15733946-15733965 | MS.gene79439:intron | 25.0% |
| !! | AAATTGGTAATCAAACGATA+TGG | - | chr3.1:15734762-15734781 | MS.gene79439:intron | 25.0% |
| !! | AATTTTCTTGTATTTGAGTC+CGG | + | chr3.1:15733127-15733146 | None:intergenic | 25.0% |
| !! | ATTCGCTGTTAAACAAATTT+TGG | - | chr3.1:15732040-15732059 | MS.gene79439:intron | 25.0% |
| !! | CAATCATTCATTTTATGAGA+AGG | + | chr3.1:15733585-15733604 | None:intergenic | 25.0% |
| !! | GATACCTCTATAATTTTATC+TGG | + | chr3.1:15734300-15734319 | None:intergenic | 25.0% |
| !! | TAAATGTTTTGTCAAATGTC+AGG | + | chr3.1:15732073-15732092 | None:intergenic | 25.0% |
| !! | TAGTAGATATATTTTGTGCA+AGG | - | chr3.1:15731820-15731839 | MS.gene79439:intron | 25.0% |
| !! | TGTGAATAATCTGTTTTATG+TGG | - | chr3.1:15730940-15730959 | MS.gene79439:intron | 25.0% |
| !! | TTGCTATGTTGAGTTAATTT+TGG | - | chr3.1:15733231-15733250 | MS.gene79439:intron | 25.0% |
| !!! | ATTTTGGTGCTAAAAGATTA+AGG | - | chr3.1:15731434-15731453 | MS.gene79439:CDS | 25.0% |
| !!! | CTAAGGCTTTAAAAATCTTA+AGG | - | chr3.1:15733374-15733393 | MS.gene79439:intron | 25.0% |
| !!! | GTTAAACAAATTTTGGTGAT+TGG | - | chr3.1:15732047-15732066 | MS.gene79439:intron | 25.0% |
| !!! | TAAATTTGCTAATGTGTGTT+TGG | - | chr3.1:15730914-15730933 | MS.gene79439:intron | 25.0% |
| !!! | TATAGAGGTATCTCTTTTAT+AGG | - | chr3.1:15734308-15734327 | MS.gene79439:intron | 25.0% |
| AAAAGGGAAGAAGAAAAAAG+GGG | - | chr3.1:15730970-15730989 | MS.gene79439:intron | 30.0% | |
| AAAGTGATAGGAACAGATTT+AGG | - | chr3.1:15731706-15731725 | MS.gene79439:intron | 30.0% | |
| AAATCTGTTCCTATCACTTT+AGG | + | chr3.1:15731706-15731725 | None:intergenic | 30.0% | |
| AATCTTAGCACCTAAAAGAA+TGG | + | chr3.1:15732742-15732761 | None:intergenic | 30.0% | |
| AATGTTAATCTTGCCTAGAT+TGG | - | chr3.1:15732291-15732310 | MS.gene79439:intron | 30.0% | |
| AATTGTGGTCAAGATTCATT+GGG | + | chr3.1:15732634-15732653 | None:intergenic | 30.0% | |
| ACTGTTTGATCAAGATCTAA+CGG | - | chr3.1:15734415-15734434 | MS.gene79439:intron | 30.0% | |
| AGAAAAGGGAAGAAGAAAAA+AGG | - | chr3.1:15730968-15730987 | MS.gene79439:intron | 30.0% | |
| AGTCTTCTGCATAATATTCT+CGG | + | chr3.1:15732801-15732820 | None:intergenic | 30.0% | |
| ATAATTACGCCTAAAGTGAT+AGG | - | chr3.1:15731694-15731713 | MS.gene79439:intron | 30.0% | |
| ATATTCACTTCAATGGTGAA+CGG | - | chr3.1:15734799-15734818 | MS.gene79439:intron | 30.0% | |
| CTAAACAATGTTCATGTTGA+TGG | + | chr3.1:15733849-15733868 | None:intergenic | 30.0% | |
| CTGATGGAATAATGAATGTT+AGG | - | chr3.1:15732477-15732496 | MS.gene79439:intron | 30.0% | |
| GAAAAGGGAAGAAGAAAAAA+GGG | - | chr3.1:15730969-15730988 | MS.gene79439:intron | 30.0% | |
| GCTATCTTGTATGTAAGTTT+AGG | - | chr3.1:15734641-15734660 | MS.gene79439:intron | 30.0% | |
| GGAAAAAAGATATCATGAGA+AGG | + | chr3.1:15733516-15733535 | None:intergenic | 30.0% | |
| GTCTATTGTGAATCTTGAAA+TGG | - | chr3.1:15733257-15733276 | MS.gene79439:intron | 30.0% | |
| TAATTGTGGTCAAGATTCAT+TGG | + | chr3.1:15732635-15732654 | None:intergenic | 30.0% | |
| TCTGCCAGATAAAATTATAG+AGG | - | chr3.1:15734293-15734312 | MS.gene79439:intron | 30.0% | |
| TGAAGCAATTGTTATACCTT+TGG | + | chr3.1:15730715-15730734 | None:intergenic | 30.0% | |
| TGGAAGATGTTAAACACTAA+AGG | + | chr3.1:15732683-15732702 | None:intergenic | 30.0% | |
| TTATGAAAGAGTTGTATACC+CGG | - | chr3.1:15731208-15731227 | MS.gene79439:intron | 30.0% | |
| TTTATGTGGAATGCAGAAAA+GGG | - | chr3.1:15730954-15730973 | MS.gene79439:intron | 30.0% | |
| ! | TCGTGCTATTGTTATTAACT+GGG | - | chr3.1:15732974-15732993 | MS.gene79439:intron | 30.0% |
| ! | TCTAAGATGTGTGATAAATC+TGG | + | chr3.1:15733944-15733963 | None:intergenic | 30.0% |
| ! | TCTCTTTTATAGGAATGTAG+AGG | - | chr3.1:15734318-15734337 | MS.gene79439:intron | 30.0% |
| ! | TGGAAGTATATTCACTTCAA+TGG | - | chr3.1:15734792-15734811 | MS.gene79439:intron | 30.0% |
| ! | TTAGCTTTCTTTATATCTGG+AGG | - | chr3.1:15733093-15733112 | MS.gene79439:intron | 30.0% |
| ! | TTTTATGTGGAATGCAGAAA+AGG | - | chr3.1:15730953-15730972 | MS.gene79439:intron | 30.0% |
| !! | ACACAAGTTCTAGAAAATAG+TGG | + | chr3.1:15733439-15733458 | None:intergenic | 30.0% |
| !! | ATCACTAAGAGAGTTAGTTT+TGG | - | chr3.1:15732896-15732915 | MS.gene79439:intron | 30.0% |
| !! | GAAAGGATGAATGGATTTTT+CGG | - | chr3.1:15731518-15731537 | MS.gene79439:intron | 30.0% |
| !!! | TAGGAATGTAGAGGTATTTT+TGG | - | chr3.1:15734327-15734346 | MS.gene79439:intron | 30.0% |
| !!! | TGCATGAGTTTTGACTTTTT+TGG | - | chr3.1:15733913-15733932 | MS.gene79439:intron | 30.0% |
| !!! | TGGCCACTCAATAATTTTTT+GGG | + | chr3.1:15732854-15732873 | None:intergenic | 30.0% |
| !!! | TTTTTTCCGTACATTACATG+TGG | - | chr3.1:15733528-15733547 | MS.gene79439:intron | 30.0% |
| AAAAATTATTGAGTGGCCAG+TGG | - | chr3.1:15732855-15732874 | MS.gene79439:intron | 35.0% | |
| AAAATTATTGAGTGGCCAGT+GGG | - | chr3.1:15732856-15732875 | MS.gene79439:intron | 35.0% | |
| AAACAGCCTCTTTCTCATTA+GGG | + | chr3.1:15733297-15733316 | None:intergenic | 35.0% | |
| AAAGGGAAGAAGAAAAAAGG+GGG | - | chr3.1:15730971-15730990 | MS.gene79439:intron | 35.0% | |
| AAATTGAGTCCGAATGTTGT+TGG | - | chr3.1:15730843-15730862 | MS.gene79439:CDS | 35.0% | |
| AACAGCGAATCAGATCAATA+TGG | + | chr3.1:15732030-15732049 | None:intergenic | 35.0% | |
| AAGGCTCTTCAAACATATTG+TGG | + | chr3.1:15731857-15731876 | None:intergenic | 35.0% | |
| AATATCTTCTTTGCCACAAG+TGG | + | chr3.1:15731009-15731028 | None:intergenic | 35.0% | |
| AATGAGAAAGAGGCTGTTTA+TGG | - | chr3.1:15733298-15733317 | MS.gene79439:intron | 35.0% | |
| ACCGAAAAATCAAGATCGAA+TGG | + | chr3.1:15734490-15734509 | None:intergenic | 35.0% | |
| ACTTCTTCTGGCATTTGATA+TGG | - | chr3.1:15734158-15734177 | MS.gene79439:intron | 35.0% | |
| AGGAATGGTTAGAATCTCAT+TGG | - | chr3.1:15734055-15734074 | MS.gene79439:intron | 35.0% | |
| AGGCTCTTCAAACATATTGT+GGG | + | chr3.1:15731856-15731875 | None:intergenic | 35.0% | |
| AGTTTAGGTATTTGCAGACA+TGG | - | chr3.1:15734656-15734675 | MS.gene79439:intron | 35.0% | |
| ATCTAGATTCCATGCAATCA+GGG | + | chr3.1:15734545-15734564 | None:intergenic | 35.0% | |
| ATGAAGACAATTAGTGTGTG+TGG | - | chr3.1:15731950-15731969 | MS.gene79439:intron | 35.0% | |
| ATGAATAGAATAATCTGCCG+TGG | - | chr3.1:15731572-15731591 | MS.gene79439:intron | 35.0% | |
| ATTAATGTTGCTGCTGATGT+TGG | - | chr3.1:15732547-15732566 | MS.gene79439:intron | 35.0% | |
| CATAATATTCTCGGACTCAA+AGG | + | chr3.1:15732792-15732811 | None:intergenic | 35.0% | |
| CCAAGAAGAGAAAAGGAAAT+TGG | - | chr3.1:15734746-15734765 | MS.gene79439:intron | 35.0% | |
| GAATTTGATATGGTCTGGAA+AGG | - | chr3.1:15731501-15731520 | MS.gene79439:intron | 35.0% | |
| GACCCCAAAAAATTATTGAG+TGG | - | chr3.1:15732848-15732867 | MS.gene79439:intron | 35.0% | |
| TAAACAGCCTCTTTCTCATT+AGG | + | chr3.1:15733298-15733317 | None:intergenic | 35.0% | |
| TACCAGAATTTGATATGGTC+TGG | - | chr3.1:15731496-15731515 | MS.gene79439:intron | 35.0% | |
| TACTCTAGACTTGATTGAGA+GGG | - | chr3.1:15731629-15731648 | MS.gene79439:intron | 35.0% | |
| TAGATCTTGATCAAACAGTC+TGG | + | chr3.1:15734414-15734433 | None:intergenic | 35.0% | |
| TATACTTTCAGTTAGCCAAG+TGG | - | chr3.1:15734091-15734110 | MS.gene79439:intron | 35.0% | |
| TATTCACTTCAATGGTGAAC+GGG | - | chr3.1:15734800-15734819 | MS.gene79439:intron | 35.0% | |
| TCAGAGATATGATCATACGA+GGG | - | chr3.1:15731181-15731200 | MS.gene79439:intron | 35.0% | |
| TCGTTAAAGTTGAGTCGATT+GGG | - | chr3.1:15734985-15735004 | MS.gene79439:CDS | 35.0% | |
| TCTGCGAGAAAAGAAGATAA+GGG | + | chr3.1:15730651-15730670 | None:intergenic | 35.0% | |
| TGCAAATTGTAACCACTCAA+TGG | + | chr3.1:15732267-15732286 | None:intergenic | 35.0% | |
| TGCAATAAGTATCACTCCAA+AGG | - | chr3.1:15730696-15730715 | MS.gene79439:intron | 35.0% | |
| TTATTCCATCCTTGTCAACT+TGG | + | chr3.1:15731678-15731697 | None:intergenic | 35.0% | |
| TTCAGAGATATGATCATACG+AGG | - | chr3.1:15731180-15731199 | MS.gene79439:intron | 35.0% | |
| TTCCAGACCATATCAAATTC+TGG | + | chr3.1:15731501-15731520 | None:intergenic | 35.0% | |
| TTCGTTAAAGTTGAGTCGAT+TGG | - | chr3.1:15734984-15735003 | MS.gene79439:intron | 35.0% | |
| TTCTGTTGAGAAGGATAAGT+AGG | - | chr3.1:15730869-15730888 | MS.gene79439:CDS | 35.0% | |
| TTGTAACCACTCAATGGTTA+AGG | + | chr3.1:15732261-15732280 | None:intergenic | 35.0% | |
| ! | ACAATGTTCATGTTGATGGA+TGG | + | chr3.1:15733845-15733864 | None:intergenic | 35.0% |
| ! | AGAAGGTAATTTTATAGCCC+TGG | + | chr3.1:15733499-15733518 | None:intergenic | 35.0% |
| ! | CCAATTTCCTTTTCTCTTCT+TGG | + | chr3.1:15734749-15734768 | None:intergenic | 35.0% |
| ! | GAAGGTAATTTTATAGCCCT+GGG | + | chr3.1:15733498-15733517 | None:intergenic | 35.0% |
| ! | GATTATATATGGACTGCTGT+TGG | - | chr3.1:15731728-15731747 | MS.gene79439:intron | 35.0% |
| ! | GCCATTCGATCTTGATTTTT+CGG | - | chr3.1:15734486-15734505 | MS.gene79439:intron | 35.0% |
| ! | GTCGTGCTATTGTTATTAAC+TGG | - | chr3.1:15732973-15732992 | MS.gene79439:intron | 35.0% |
| ! | GTGAAATCATAGCTGCATTT+TGG | - | chr3.1:15731418-15731437 | MS.gene79439:CDS | 35.0% |
| ! | TCAAACGATATGGCCTTAAA+TGG | - | chr3.1:15734772-15734791 | MS.gene79439:intron | 35.0% |
| ! | TGTCTAAGAGACTGTTTTCT+AGG | - | chr3.1:15734244-15734263 | MS.gene79439:intron | 35.0% |
| ! | TTCGAGTGAACCATTCTTTT+AGG | - | chr3.1:15732729-15732748 | MS.gene79439:intron | 35.0% |
| ! | TTTATGGAGCGTTAGACAAA+TGG | - | chr3.1:15733314-15733333 | MS.gene79439:intron | 35.0% |
| !! | GAATAGCTGTATTCTAAAGC+AGG | - | chr3.1:15732513-15732532 | MS.gene79439:intron | 35.0% |
| !! | GATTTTTCGGAAGGAGTTAT+AGG | - | chr3.1:15731531-15731550 | MS.gene79439:intron | 35.0% |
| !! | TGTTGGTTTCTAGCAGAATA+AGG | - | chr3.1:15731745-15731764 | MS.gene79439:intron | 35.0% |
| !! | TTCTTGGCCTAGTTTTCTAA+AGG | + | chr3.1:15734733-15734752 | None:intergenic | 35.0% |
| !!! | AGTTTTGGTTGCAGGATTTT+AGG | - | chr3.1:15732911-15732930 | MS.gene79439:intron | 35.0% |
| !!! | ATATCTGGAGGTTACTTTTC+CGG | - | chr3.1:15733105-15733124 | MS.gene79439:intron | 35.0% |
| !!! | CTGGCCACTCAATAATTTTT+TGG | + | chr3.1:15732855-15732874 | None:intergenic | 35.0% |
| !!! | GGCCACTCAATAATTTTTTG+GGG | + | chr3.1:15732853-15732872 | None:intergenic | 35.0% |
| AAAGGACAAGGAGCAACAAT+GGG | - | chr3.1:15734123-15734142 | MS.gene79439:intron | 40.0% | |
| AAAGTAACATGTATCCCCAC+AGG | - | chr3.1:15731987-15732006 | MS.gene79439:intron | 40.0% | |
| AAATTATTGAGTGGCCAGTG+GGG | - | chr3.1:15732857-15732876 | MS.gene79439:intron | 40.0% | |
| AACAACACGTTCTCCTGATA+AGG | + | chr3.1:15733175-15733194 | None:intergenic | 40.0% | |
| AACATACGACACACTTCTTC+TGG | - | chr3.1:15734146-15734165 | MS.gene79439:intron | 40.0% | |
| AACCTGATGAAGATACAGTC+AGG | - | chr3.1:15734694-15734713 | MS.gene79439:CDS | 40.0% | |
| AACTAGGCCAAGAAGAGAAA+AGG | - | chr3.1:15734739-15734758 | MS.gene79439:intron | 40.0% | |
| AATATTGGTACCCACTTCTC+TGG | + | chr3.1:15732658-15732677 | None:intergenic | 40.0% | |
| ACAACACGTTCTCCTGATAA+GGG | + | chr3.1:15733174-15733193 | None:intergenic | 40.0% | |
| ACAGAACCACCAACAACATT+CGG | + | chr3.1:15730855-15730874 | None:intergenic | 40.0% | |
| ACCACAATTACCAGAGAAGT+GGG | - | chr3.1:15732645-15732664 | MS.gene79439:intron | 40.0% | |
| AGAAGATATTCAGCTCAGTC+TGG | - | chr3.1:15731019-15731038 | MS.gene79439:intron | 40.0% | |
| AGAATGGAAAGAGGACAGTA+AGG | - | chr3.1:15732206-15732225 | MS.gene79439:CDS | 40.0% | |
| AGATCAATATGGACTCTTCC+TGG | + | chr3.1:15732019-15732038 | None:intergenic | 40.0% | |
| CATTCGGACTCAATTTCGAT+CGG | + | chr3.1:15730839-15730858 | None:intergenic | 40.0% | |
| CCATCAGAATCAGCAAAGAT+TGG | + | chr3.1:15732464-15732483 | None:intergenic | 40.0% | |
| CCTTAGCTACTGCAATCAAT+GGG | + | chr3.1:15733360-15733379 | None:intergenic | 40.0% | |
| CTAATGCTCACTTCTCTCTT+TGG | + | chr3.1:15732188-15732207 | None:intergenic | 40.0% | |
| CTACTCTAGACTTGATTGAG+AGG | - | chr3.1:15731628-15731647 | MS.gene79439:intron | 40.0% | |
| CTGCAAACAATAGATGTGAG+TGG | - | chr3.1:15732231-15732250 | MS.gene79439:CDS | 40.0% | |
| GACAAAGCCAATGAGTTAGA+TGG | - | chr3.1:15731594-15731613 | MS.gene79439:intron | 40.0% | |
| GAGAGAAGTGAGCATTAGAA+TGG | - | chr3.1:15732190-15732209 | MS.gene79439:CDS | 40.0% | |
| GAGAGTTAGAACACATGCAT+GGG | - | chr3.1:15734824-15734843 | MS.gene79439:intron | 40.0% | |
| GATCTAGATTCCATGCAATC+AGG | + | chr3.1:15734546-15734565 | None:intergenic | 40.0% | |
| GCTCAAGAGTCATCATATCA+GGG | - | chr3.1:15732358-15732377 | MS.gene79439:intron | 40.0% | |
| GGGTTCGTGTAATTCAAGTA+CGG | - | chr3.1:15733410-15733429 | MS.gene79439:intron | 40.0% | |
| GTAAGATAGAACACCACTTG+TGG | - | chr3.1:15730993-15731012 | MS.gene79439:intron | 40.0% | |
| GTCTGCGAGAAAAGAAGATA+AGG | + | chr3.1:15730652-15730671 | None:intergenic | 40.0% | |
| GTGAGCATTAGAATGGAAAG+AGG | - | chr3.1:15732197-15732216 | MS.gene79439:CDS | 40.0% | |
| GTGATGAATAGACCAGTGAA+AGG | - | chr3.1:15731382-15731401 | MS.gene79439:CDS | 40.0% | |
| GTTAATCTTGCCTAGATTGG+TGG | - | chr3.1:15732294-15732313 | MS.gene79439:intron | 40.0% | |
| GTTGTATACCCGGAAAAAAC+TGG | - | chr3.1:15731218-15731237 | MS.gene79439:intron | 40.0% | |
| TAACCAAGGTTACAAAGCAG+AGG | + | chr3.1:15734029-15734048 | None:intergenic | 40.0% | |
| TATGCAGAAGACTCAGAAAG+CGG | - | chr3.1:15732808-15732827 | MS.gene79439:intron | 40.0% | |
| TATGGAACAGAGAGTAGATG+AGG | - | chr3.1:15734176-15734195 | MS.gene79439:intron | 40.0% | |
| TATGGTCTGGAAAGGATGAA+TGG | - | chr3.1:15731509-15731528 | MS.gene79439:intron | 40.0% | |
| TCGACCCTTTGATTCAACAA+CGG | + | chr3.1:15734944-15734963 | None:intergenic | 40.0% | |
| TCTAGATTCCATGCAATCAG+GGG | + | chr3.1:15734544-15734563 | None:intergenic | 40.0% | |
| TCTGCCGTTGTTGAATCAAA+GGG | - | chr3.1:15734937-15734956 | MS.gene79439:intron | 40.0% | |
| TCTTCAGCCATCTAACTCAT+TGG | + | chr3.1:15731604-15731623 | None:intergenic | 40.0% | |
| TGAACTCCCTAATGAGAAAG+AGG | - | chr3.1:15733288-15733307 | MS.gene79439:intron | 40.0% | |
| TGAAGATACAGTCAGGAAAG+TGG | - | chr3.1:15734701-15734720 | MS.gene79439:CDS | 40.0% | |
| TGAGAGTTAGAACACATGCA+TGG | - | chr3.1:15734823-15734842 | MS.gene79439:intron | 40.0% | |
| TGAGCAAGTCATCGTGTTAT+AGG | + | chr3.1:15732343-15732362 | None:intergenic | 40.0% | |
| TGCTCAAGAGTCATCATATC+AGG | - | chr3.1:15732357-15732376 | MS.gene79439:intron | 40.0% | |
| TGTAACCTTGGTTAACTGTG+AGG | - | chr3.1:15734035-15734054 | MS.gene79439:intron | 40.0% | |
| TTACCAAACATGTCCTTCGT+AGG | + | chr3.1:15730557-15730576 | None:intergenic | 40.0% | |
| TTCCTGACTGTATCTTCATC+AGG | + | chr3.1:15734699-15734718 | None:intergenic | 40.0% | |
| TTCTGCCGTTGTTGAATCAA+AGG | - | chr3.1:15734936-15734955 | MS.gene79439:intron | 40.0% | |
| TTTCCGTACATTACATGTGG+TGG | - | chr3.1:15733531-15733550 | MS.gene79439:intron | 40.0% | |
| ! | CAACTTTTATGGCTCCAGTT+TGG | - | chr3.1:15733742-15733761 | MS.gene79439:intron | 40.0% |
| ! | CACTGGTCTATTCATCACAT+AGG | + | chr3.1:15731380-15731399 | None:intergenic | 40.0% |
| ! | CTTGACTGCGAATTTTCACT+CGG | + | chr3.1:15734387-15734406 | None:intergenic | 40.0% |
| ! | TTGACTGCGAATTTTCACTC+GGG | + | chr3.1:15734386-15734405 | None:intergenic | 40.0% |
| ! | TTTTCGGAAGGAGTTATAGG+TGG | - | chr3.1:15731534-15731553 | MS.gene79439:intron | 40.0% |
| !! | ATGTCCTTCGTAGGAGTATT+GGG | + | chr3.1:15730548-15730567 | None:intergenic | 40.0% |
| !! | CCAATCTTTGCTGATTCTGA+TGG | - | chr3.1:15732461-15732480 | MS.gene79439:intron | 40.0% |
| !! | GGATGAATGGATTTTTCGGA+AGG | - | chr3.1:15731522-15731541 | MS.gene79439:intron | 40.0% |
| !! | TAACTCATTGGCTTTGTCCA+CGG | + | chr3.1:15731592-15731611 | None:intergenic | 40.0% |
| !!! | ACTTGAGTCCAGTTTTTTCC+GGG | + | chr3.1:15731229-15731248 | None:intergenic | 40.0% |
| !!! | AGAGAGTTAGTTTTGGTTGC+AGG | - | chr3.1:15732903-15732922 | MS.gene79439:intron | 40.0% |
| !!! | CACTTGAGTCCAGTTTTTTC+CGG | + | chr3.1:15731230-15731249 | None:intergenic | 40.0% |
| AATCAAAGGGTCGAGTGCAA+AGG | - | chr3.1:15734950-15734969 | MS.gene79439:intron | 45.0% | |
| ACCCACTTCTCTGGTAATTG+TGG | + | chr3.1:15732649-15732668 | None:intergenic | 45.0% | |
| ACGTTCTCCTGATAAGGGTT+TGG | + | chr3.1:15733169-15733188 | None:intergenic | 45.0% | |
| ACTCCTACGAAGGACATGTT+TGG | - | chr3.1:15730551-15730570 | MS.gene79439:CDS | 45.0% | |
| ATACAGTCAGGAAAGTGGCA+AGG | - | chr3.1:15734706-15734725 | MS.gene79439:CDS | 45.0% | |
| ATAGACCAGTGAAAGGCGAA+AGG | - | chr3.1:15731389-15731408 | MS.gene79439:CDS | 45.0% | |
| ATGCAGAAGACTCAGAAAGC+GGG | - | chr3.1:15732809-15732828 | MS.gene79439:intron | 45.0% | |
| ATGGTTCACTCGAACAGTAC+AGG | + | chr3.1:15732723-15732742 | None:intergenic | 45.0% | |
| CAAAGGACAAGGAGCAACAA+TGG | - | chr3.1:15734122-15734141 | MS.gene79439:intron | 45.0% | |
| CAATGGGAACTCTATTTCCC+AGG | + | chr3.1:15733344-15733363 | None:intergenic | 45.0% | |
| CAGTGCAGCACATAACATCA+TGG | + | chr3.1:15732954-15732973 | None:intergenic | 45.0% | |
| CCATTCCTCACAGTTAACCA+AGG | + | chr3.1:15734043-15734062 | None:intergenic | 45.0% | |
| CCTCGATAGCATTCTTGAGA+AGG | + | chr3.1:15733873-15733892 | None:intergenic | 45.0% | |
| CCTTCTCAAGAATGCTATCG+AGG | - | chr3.1:15733870-15733889 | MS.gene79439:intron | 45.0% | |
| CCTTGGTTAACTGTGAGGAA+TGG | - | chr3.1:15734040-15734059 | MS.gene79439:intron | 45.0% | |
| CTAGATTCCATGCAATCAGG+GGG | + | chr3.1:15734543-15734562 | None:intergenic | 45.0% | |
| CTATTCCTTTCGCCTTTCAC+TGG | + | chr3.1:15731397-15731416 | None:intergenic | 45.0% | |
| CTCAAGTGCGAGTAAAGCTT+TGG | - | chr3.1:15731242-15731261 | MS.gene79439:intron | 45.0% | |
| CTTAAGGAAAAGGGCTCAGT+GGG | - | chr3.1:15733390-15733409 | MS.gene79439:intron | 45.0% | |
| GAAGGAGTTATAGGTGGTGA+AGG | - | chr3.1:15731540-15731559 | MS.gene79439:intron | 45.0% | |
| GACCACAATTACCAGAGAAG+TGG | - | chr3.1:15732644-15732663 | MS.gene79439:intron | 45.0% | |
| GATTCATTGGGCATAGTCAC+AGG | + | chr3.1:15732622-15732641 | None:intergenic | 45.0% | |
| GCCTTAGCTACTGCAATCAA+TGG | + | chr3.1:15733361-15733380 | None:intergenic | 45.0% | |
| GCTCCACCACATGTAATGTA+CGG | + | chr3.1:15733537-15733556 | None:intergenic | 45.0% | |
| GGTGAACCTTAACCATTGAG+TGG | - | chr3.1:15732252-15732271 | MS.gene79439:CDS | 45.0% | |
| GTACCTCTGCTTTGTAACCT+TGG | - | chr3.1:15734023-15734042 | MS.gene79439:intron | 45.0% | |
| GTGCAATCCAAACCCTTATC+AGG | - | chr3.1:15733159-15733178 | MS.gene79439:intron | 45.0% | |
| TACAGTCAGGAAAGTGGCAA+GGG | - | chr3.1:15734707-15734726 | MS.gene79439:CDS | 45.0% | |
| TAGATGAGGCAGAATCCTTG+TGG | - | chr3.1:15734190-15734209 | MS.gene79439:intron | 45.0% | |
| TCATCATATCAGGGTCGAGT+TGG | - | chr3.1:15732367-15732386 | MS.gene79439:intron | 45.0% | |
| TCCTTTGCTCAACATCCACT+TGG | + | chr3.1:15734109-15734128 | None:intergenic | 45.0% | |
| TCTTAAGGAAAAGGGCTCAG+TGG | - | chr3.1:15733389-15733408 | MS.gene79439:intron | 45.0% | |
| TCTTCCTGGTACAATCCTGT+GGG | + | chr3.1:15732005-15732024 | None:intergenic | 45.0% | |
| TGGATGTTGAGCAAAGGACA+AGG | - | chr3.1:15734111-15734130 | MS.gene79439:intron | 45.0% | |
| TGGGCATAGTCACAGGTATA+GGG | + | chr3.1:15732615-15732634 | None:intergenic | 45.0% | |
| TTGAGTCCGAATGTTGTTGG+TGG | - | chr3.1:15730846-15730865 | MS.gene79439:CDS | 45.0% | |
| TTGCAGACATGGAAGAGTTG+CGG | - | chr3.1:15734667-15734686 | MS.gene79439:intron | 45.0% | |
| TTGGGCATAGTCACAGGTAT+AGG | + | chr3.1:15732616-15732635 | None:intergenic | 45.0% | |
| TTTCCCCAATACTCCTACGA+AGG | - | chr3.1:15730541-15730560 | MS.gene79439:CDS | 45.0% | |
| TTTCGATCGGACAACTTTGC+AGG | + | chr3.1:15730826-15730845 | None:intergenic | 45.0% | |
| ! | CAAAGATTGGTTCCTTGCCA+AGG | + | chr3.1:15732451-15732470 | None:intergenic | 45.0% |
| ! | CATGTCCTTCGTAGGAGTAT+TGG | + | chr3.1:15730549-15730568 | None:intergenic | 45.0% |
| ! | CCCATTGATTGCAGTAGCTA+AGG | - | chr3.1:15733357-15733376 | MS.gene79439:intron | 45.0% |
| ! | GCAAGGGCCTTTAGAAAACT+AGG | - | chr3.1:15734723-15734742 | MS.gene79439:CDS | 45.0% |
| ! | TGACAAGAGTGAGTGCCTTT+TGG | + | chr3.1:15731045-15731064 | None:intergenic | 45.0% |
| ! | TGACTGCGAATTTTCACTCG+GGG | + | chr3.1:15734385-15734404 | None:intergenic | 45.0% |
| ! | TGCCATTTGAGATGACTGGT+GGG | - | chr3.1:15732414-15732433 | MS.gene79439:intron | 45.0% |
| ! | TGGAGCGTTAGACAAATGGA+CGG | - | chr3.1:15733318-15733337 | MS.gene79439:intron | 45.0% |
| ! | TTTGGCCAAGTTGACAAGGA+TGG | - | chr3.1:15731670-15731689 | MS.gene79439:intron | 45.0% |
| !! | AGGTGGCTTTAGGTATCAGA+TGG | + | chr3.1:15732703-15732722 | None:intergenic | 45.0% |
| !! | AGTCATGTATGGCCTTGTAG+AGG | + | chr3.1:15731294-15731313 | None:intergenic | 45.0% |
| !! | CATGTGCCATTTGAGATGAC+TGG | - | chr3.1:15732410-15732429 | MS.gene79439:intron | 45.0% |
| !! | GCTGCTGATGTTGGTAATCA+GGG | - | chr3.1:15732556-15732575 | MS.gene79439:intron | 45.0% |
| !! | TGCTGCTGATGTTGGTAATC+AGG | - | chr3.1:15732555-15732574 | MS.gene79439:intron | 45.0% |
| !! | TGTCCTTCGTAGGAGTATTG+GGG | + | chr3.1:15730547-15730566 | None:intergenic | 45.0% |
| !! | TGTTGGTGGTTCTGTTGAGA+AGG | - | chr3.1:15730860-15730879 | MS.gene79439:CDS | 45.0% |
| ACTTGAGAGACCAGCTGGTT+TGG | - | chr3.1:15731652-15731671 | MS.gene79439:intron | 50.0% | |
| AGATCTAACGGCTCATGCTC+TGG | - | chr3.1:15734427-15734446 | MS.gene79439:intron | 50.0% | |
| AGCCCTGGGCATTTACAAGT+CGG | + | chr3.1:15733484-15733503 | None:intergenic | 50.0% | |
| CAAGCTGTGGAACCTCTACA+AGG | - | chr3.1:15731279-15731298 | MS.gene79439:CDS | 50.0% | |
| CGAACAGTACAGGTGGCTTT+AGG | + | chr3.1:15732713-15732732 | None:intergenic | 50.0% | |
| CTCTTCCTGGTACAATCCTG+TGG | + | chr3.1:15732006-15732025 | None:intergenic | 50.0% | |
| CTTAGACACAGAGCGCATGT+GGG | + | chr3.1:15734232-15734251 | None:intergenic | 50.0% | |
| CTTCCTGGTACAATCCTGTG+GGG | + | chr3.1:15732004-15732023 | None:intergenic | 50.0% | |
| CTTGTAGAGGTTCCACAGCT+TGG | + | chr3.1:15731281-15731300 | None:intergenic | 50.0% | |
| GCATAGTCACAGGTATAGGG+TGG | + | chr3.1:15732612-15732631 | None:intergenic | 50.0% | |
| GCCAAGTGGATGTTGAGCAA+AGG | - | chr3.1:15734105-15734124 | MS.gene79439:intron | 50.0% | |
| GCGTCTTTCATTCCAAGCTG+TGG | - | chr3.1:15731266-15731285 | MS.gene79439:CDS | 50.0% | |
| GGAGTTATAGGTGGTGAAGG+AGG | - | chr3.1:15731543-15731562 | MS.gene79439:intron | 50.0% | |
| GTTAGACAAATGGACGGCCT+GGG | - | chr3.1:15733324-15733343 | MS.gene79439:intron | 50.0% | |
| GTTCACTCGAACAGTACAGG+TGG | + | chr3.1:15732720-15732739 | None:intergenic | 50.0% | |
| TATCCCCACAGGATTGTACC+AGG | - | chr3.1:15731998-15732017 | MS.gene79439:intron | 50.0% | |
| TCTTAGACACAGAGCGCATG+TGG | + | chr3.1:15734233-15734252 | None:intergenic | 50.0% | |
| TGCAGACATGGAAGAGTTGC+GGG | - | chr3.1:15734668-15734687 | MS.gene79439:intron | 50.0% | |
| TGGCATCCATGGGATGTTGT+GGG | - | chr3.1:15732314-15732333 | MS.gene79439:intron | 50.0% | |
| TGGTGGAGCTTAAATGCCCA+GGG | - | chr3.1:15733548-15733567 | MS.gene79439:intron | 50.0% | |
| TGGTTCTCGGGAAACGAAGT+CGG | + | chr3.1:15735016-15735035 | None:intergenic | 50.0% | |
| TTCAGCTCAGTCTGGCCAAA+AGG | - | chr3.1:15731027-15731046 | MS.gene79439:intron | 50.0% | |
| ! | AGAAAGCGGGCTTGCTTTGA+AGG | - | chr3.1:15732822-15732841 | MS.gene79439:intron | 50.0% |
| ! | CCTAGATTGGTGGCATCCAT+GGG | - | chr3.1:15732304-15732323 | MS.gene79439:intron | 50.0% |
| ! | GCCATTTGAGATGACTGGTG+GGG | - | chr3.1:15732415-15732434 | MS.gene79439:intron | 50.0% |
| !! | CACCGACTTGTAAATGCCCA+GGG | - | chr3.1:15733479-15733498 | MS.gene79439:intron | 50.0% |
| !! | CTGGTTTGGCCAAGTTGACA+AGG | - | chr3.1:15731666-15731685 | MS.gene79439:intron | 50.0% |
| !! | GTGCCATTTGAGATGACTGG+TGG | - | chr3.1:15732413-15732432 | MS.gene79439:intron | 50.0% |
| !! | TCACCGACTTGTAAATGCCC+AGG | - | chr3.1:15733478-15733497 | MS.gene79439:intron | 50.0% |
| AGGTGACCCACAACATCCCA+TGG | + | chr3.1:15732323-15732342 | None:intergenic | 55.0% | |
| ATAAACTCCTCCCACCCCAC+TGG | + | chr3.1:15732874-15732893 | None:intergenic | 55.0% | |
| CCCATGGATGCCACCAATCT+AGG | + | chr3.1:15732307-15732326 | None:intergenic | 55.0% | |
| CGTTAGACAAATGGACGGCC+TGG | - | chr3.1:15733323-15733342 | MS.gene79439:intron | 55.0% | |
| GCCCCACCAGTCATCTCAAA+TGG | + | chr3.1:15732419-15732438 | None:intergenic | 55.0% | |
| GGCTGATGTGATCCTTGGCA+AGG | - | chr3.1:15732436-15732455 | MS.gene79439:intron | 55.0% | |
| GGTTCTCGGGAAACGAAGTC+GGG | + | chr3.1:15735015-15735034 | None:intergenic | 55.0% | |
| GTCAACTTGGCCAAACCAGC+TGG | + | chr3.1:15731665-15731684 | None:intergenic | 55.0% | |
| GTGGCATCCATGGGATGTTG+TGG | - | chr3.1:15732313-15732332 | MS.gene79439:intron | 55.0% | |
| TAACGGCTCATGCTCTGGCT+TGG | - | chr3.1:15734432-15734451 | MS.gene79439:intron | 55.0% | |
| TATTGAGTGGCCAGTGGGGT+GGG | - | chr3.1:15732861-15732880 | MS.gene79439:intron | 55.0% | |
| TGCATGACCCCCTGATTGCA+TGG | - | chr3.1:15734533-15734552 | MS.gene79439:CDS | 55.0% | |
| TTATTGAGTGGCCAGTGGGG+TGG | - | chr3.1:15732860-15732879 | MS.gene79439:intron | 55.0% | |
| ! | GCCTAGATTGGTGGCATCCA+TGG | - | chr3.1:15732303-15732322 | MS.gene79439:intron | 55.0% |
| ! | GTGGTGGAGCTTAAATGCCC+AGG | - | chr3.1:15733547-15733566 | MS.gene79439:intron | 55.0% |
| !! | GGGTCGAGTTGGTTGTGCAA+CGG | - | chr3.1:15732378-15732397 | MS.gene79439:intron | 55.0% |
| GAGGGACTTGAGAGACCAGC+TGG | - | chr3.1:15731647-15731666 | MS.gene79439:intron | 60.0% | |
| GGTGGGGCTGATGTGATCCT+TGG | - | chr3.1:15732431-15732450 | MS.gene79439:intron | 60.0% | |
| TGAGTGGCCAGTGGGGTGGG+AGG | - | chr3.1:15732864-15732883 | MS.gene79439:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 15730513 | 15735044 | 15730513 | ID=MS.gene79439 |
| chr3.1 | mRNA | 15730513 | 15735044 | 15730513 | ID=MS.gene79439.t1;Parent=MS.gene79439 |
| chr3.1 | exon | 15734985 | 15735044 | 15734985 | ID=MS.gene79439.t1.exon1;Parent=MS.gene79439.t1 |
| chr3.1 | CDS | 15734985 | 15735044 | 15734985 | ID=cds.MS.gene79439.t1;Parent=MS.gene79439.t1 |
| chr3.1 | exon | 15734840 | 15734887 | 15734840 | ID=MS.gene79439.t1.exon2;Parent=MS.gene79439.t1 |
| chr3.1 | CDS | 15734840 | 15734887 | 15734840 | ID=cds.MS.gene79439.t1;Parent=MS.gene79439.t1 |
| chr3.1 | exon | 15734671 | 15734747 | 15734671 | ID=MS.gene79439.t1.exon3;Parent=MS.gene79439.t1 |
| chr3.1 | CDS | 15734671 | 15734747 | 15734671 | ID=cds.MS.gene79439.t1;Parent=MS.gene79439.t1 |
| chr3.1 | exon | 15734488 | 15734587 | 15734488 | ID=MS.gene79439.t1.exon4;Parent=MS.gene79439.t1 |
| chr3.1 | CDS | 15734488 | 15734587 | 15734488 | ID=cds.MS.gene79439.t1;Parent=MS.gene79439.t1 |
| chr3.1 | exon | 15732131 | 15732274 | 15732131 | ID=MS.gene79439.t1.exon5;Parent=MS.gene79439.t1 |
| chr3.1 | CDS | 15732131 | 15732274 | 15732131 | ID=cds.MS.gene79439.t1;Parent=MS.gene79439.t1 |
| chr3.1 | exon | 15731243 | 15731455 | 15731243 | ID=MS.gene79439.t1.exon6;Parent=MS.gene79439.t1 |
| chr3.1 | CDS | 15731243 | 15731455 | 15731243 | ID=cds.MS.gene79439.t1;Parent=MS.gene79439.t1 |
| chr3.1 | exon | 15730736 | 15730894 | 15730736 | ID=MS.gene79439.t1.exon7;Parent=MS.gene79439.t1 |
| chr3.1 | CDS | 15730736 | 15730894 | 15730736 | ID=cds.MS.gene79439.t1;Parent=MS.gene79439.t1 |
| chr3.1 | exon | 15730513 | 15730626 | 15730513 | ID=MS.gene79439.t1.exon8;Parent=MS.gene79439.t1 |
| chr3.1 | CDS | 15730513 | 15730626 | 15730513 | ID=cds.MS.gene79439.t1;Parent=MS.gene79439.t1 |
| Gene Sequence |
| Protein sequence |
