Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80842.t1 | XP_003620479.2 | 97.4 | 349 | 9 | 0 | 1 | 349 | 1 | 349 | 2.40E-194 | 688 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80842.t1 | Q9C942 | 35.0 | 297 | 178 | 5 | 52 | 341 | 34 | 322 | 1.0e-44 | 182.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80842.t1 | G7KN38 | 97.4 | 345 | 9 | 0 | 5 | 349 | 1 | 345 | 1.6e-192 | 681.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050020 | MS.gene80842 | 0.874873 | 4.81E-68 | -1.69E-46 |
| MS.gene050206 | MS.gene80842 | 0.806859 | 6.70E-50 | -1.69E-46 |
| MS.gene050298 | MS.gene80842 | 0.816678 | 4.89E-52 | -1.69E-46 |
| MS.gene050563 | MS.gene80842 | 0.854607 | 1.10E-61 | -1.69E-46 |
| MS.gene050584 | MS.gene80842 | 0.89574 | 7.19E-76 | -1.69E-46 |
| MS.gene050585 | MS.gene80842 | 0.871504 | 6.50E-67 | -1.69E-46 |
| MS.gene050586 | MS.gene80842 | 0.816857 | 4.45E-52 | -1.69E-46 |
| MS.gene050587 | MS.gene80842 | 0.890214 | 1.21E-73 | -1.69E-46 |
| MS.gene050711 | MS.gene80842 | 0.800318 | 1.52E-48 | -1.69E-46 |
| MS.gene050807 | MS.gene80842 | 0.821395 | 4.13E-53 | -1.69E-46 |
| MS.gene05143 | MS.gene80842 | 0.857055 | 2.12E-62 | -1.69E-46 |
| MS.gene051626 | MS.gene80842 | 0.816531 | 5.27E-52 | -1.69E-46 |
| MS.gene051789 | MS.gene80842 | 0.895129 | 1.29E-75 | -1.69E-46 |
| MS.gene052142 | MS.gene80842 | 0.878568 | 2.53E-69 | -1.69E-46 |
| MS.gene052698 | MS.gene80842 | 0.815978 | 7.01E-52 | -1.69E-46 |
| MS.gene052967 | MS.gene80842 | 0.807214 | 5.64E-50 | -1.69E-46 |
| MS.gene053074 | MS.gene80842 | 0.85031 | 1.84E-60 | -1.69E-46 |
| MS.gene053383 | MS.gene80842 | 0.875355 | 3.29E-68 | -1.69E-46 |
| MS.gene053563 | MS.gene80842 | 0.832783 | 7.76E-56 | -1.69E-46 |
| MS.gene05456 | MS.gene80842 | 0.957601 | 1.83E-115 | -1.69E-46 |
| MS.gene054596 | MS.gene80842 | 0.818146 | 2.28E-52 | -1.69E-46 |
| MS.gene055359 | MS.gene80842 | 0.887016 | 2.07E-72 | -1.69E-46 |
| MS.gene057022 | MS.gene80842 | 0.807717 | 4.41E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene80842 | 0.811949 | 5.42E-51 | -1.69E-46 |
| MS.gene059006 | MS.gene80842 | 0.895237 | 1.16E-75 | -1.69E-46 |
| MS.gene059768 | MS.gene80842 | 0.837669 | 4.53E-57 | -1.69E-46 |
| MS.gene060513 | MS.gene80842 | 0.802824 | 4.67E-49 | -1.69E-46 |
| MS.gene060691 | MS.gene80842 | 0.846969 | 1.56E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80842.t1 | MTR_6g084420 | 97.391 | 345 | 9 | 0 | 5 | 349 | 1 | 345 | 0.0 | 697 |
| MS.gene80842.t1 | MTR_7g007260 | 66.265 | 332 | 111 | 1 | 10 | 341 | 7 | 337 | 2.32e-166 | 468 |
| MS.gene80842.t1 | MTR_6g018490 | 63.127 | 339 | 124 | 1 | 5 | 343 | 1 | 338 | 5.39e-162 | 457 |
| MS.gene80842.t1 | MTR_7g007260 | 63.855 | 332 | 106 | 2 | 10 | 341 | 7 | 324 | 1.48e-154 | 437 |
| MS.gene80842.t1 | MTR_7g007260 | 63.664 | 333 | 106 | 3 | 10 | 341 | 7 | 325 | 1.13e-152 | 432 |
| MS.gene80842.t1 | MTR_5g056550 | 54.118 | 340 | 154 | 2 | 8 | 346 | 57 | 395 | 3.37e-140 | 403 |
| MS.gene80842.t1 | MTR_6g025610 | 64.014 | 289 | 103 | 1 | 55 | 343 | 41 | 328 | 1.29e-138 | 397 |
| MS.gene80842.t1 | MTR_1g110670 | 53.205 | 312 | 144 | 2 | 34 | 344 | 49 | 359 | 4.11e-123 | 358 |
| MS.gene80842.t1 | MTR_5g056550 | 48.824 | 340 | 139 | 3 | 8 | 346 | 57 | 362 | 1.04e-117 | 345 |
| MS.gene80842.t1 | MTR_1g088470 | 45.205 | 292 | 159 | 1 | 58 | 349 | 8 | 298 | 5.98e-89 | 270 |
| MS.gene80842.t1 | MTR_7g108770 | 44.444 | 288 | 158 | 2 | 58 | 345 | 8 | 293 | 6.10e-86 | 263 |
| MS.gene80842.t1 | MTR_1g115535 | 41.554 | 296 | 172 | 1 | 47 | 342 | 3 | 297 | 9.40e-81 | 249 |
| MS.gene80842.t1 | MTR_1g115535 | 42.361 | 288 | 165 | 1 | 55 | 342 | 7 | 293 | 1.51e-80 | 248 |
| MS.gene80842.t1 | MTR_5g056550 | 55.497 | 191 | 84 | 1 | 8 | 197 | 57 | 247 | 1.55e-80 | 247 |
| MS.gene80842.t1 | MTR_5g056550 | 56.383 | 188 | 81 | 1 | 8 | 194 | 57 | 244 | 2.01e-80 | 246 |
| MS.gene80842.t1 | MTR_4g089170 | 39.855 | 276 | 164 | 2 | 66 | 340 | 47 | 321 | 1.67e-72 | 228 |
| MS.gene80842.t1 | MTR_4g127220 | 36.735 | 294 | 177 | 5 | 52 | 341 | 25 | 313 | 7.92e-57 | 187 |
| MS.gene80842.t1 | MTR_1g095110 | 36.207 | 290 | 179 | 5 | 61 | 347 | 34 | 320 | 9.24e-57 | 187 |
| MS.gene80842.t1 | MTR_6g071475 | 31.408 | 277 | 178 | 7 | 66 | 340 | 122 | 388 | 1.91e-30 | 119 |
| MS.gene80842.t1 | MTR_3g109870 | 29.021 | 286 | 160 | 9 | 66 | 342 | 103 | 354 | 3.99e-20 | 90.5 |
| MS.gene80842.t1 | MTR_1g110680 | 36.697 | 109 | 65 | 1 | 236 | 344 | 2 | 106 | 3.93e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80842.t1 | AT5G16120 | 61.747 | 332 | 126 | 1 | 12 | 343 | 10 | 340 | 1.86e-163 | 461 |
| MS.gene80842.t1 | AT5G16120 | 61.747 | 332 | 126 | 1 | 12 | 343 | 10 | 340 | 1.86e-163 | 461 |
| MS.gene80842.t1 | AT5G16120 | 61.747 | 332 | 126 | 1 | 12 | 343 | 28 | 358 | 2.80e-163 | 461 |
| MS.gene80842.t1 | AT5G16120 | 61.747 | 332 | 126 | 1 | 12 | 343 | 42 | 372 | 6.22e-163 | 461 |
| MS.gene80842.t1 | AT1G77420 | 51.765 | 340 | 162 | 2 | 8 | 346 | 44 | 382 | 2.88e-133 | 385 |
| MS.gene80842.t1 | AT3G62860 | 44.755 | 286 | 156 | 2 | 58 | 343 | 9 | 292 | 2.05e-86 | 265 |
| MS.gene80842.t1 | AT2G39420 | 44.828 | 290 | 159 | 1 | 52 | 341 | 5 | 293 | 7.27e-86 | 262 |
| MS.gene80842.t1 | AT2G47630 | 45.936 | 283 | 151 | 2 | 59 | 340 | 10 | 291 | 3.80e-84 | 259 |
| MS.gene80842.t1 | AT2G39410 | 42.857 | 294 | 167 | 1 | 50 | 343 | 3 | 295 | 1.86e-80 | 248 |
| MS.gene80842.t1 | AT1G11090 | 41.000 | 300 | 172 | 3 | 54 | 349 | 26 | 324 | 5.60e-80 | 247 |
| MS.gene80842.t1 | AT2G39400 | 43.103 | 290 | 164 | 1 | 55 | 344 | 2 | 290 | 8.87e-78 | 241 |
| MS.gene80842.t1 | AT3G55180 | 42.034 | 295 | 169 | 2 | 55 | 348 | 2 | 295 | 1.15e-76 | 238 |
| MS.gene80842.t1 | AT3G62860 | 44.980 | 249 | 136 | 1 | 96 | 344 | 3 | 250 | 3.59e-75 | 234 |
| MS.gene80842.t1 | AT2G47630 | 45.714 | 245 | 132 | 1 | 96 | 340 | 3 | 246 | 2.08e-72 | 227 |
| MS.gene80842.t1 | AT2G47630 | 46.444 | 239 | 127 | 1 | 106 | 344 | 33 | 270 | 5.90e-72 | 227 |
| MS.gene80842.t1 | AT3G55190 | 39.322 | 295 | 178 | 1 | 52 | 345 | 4 | 298 | 1.13e-70 | 223 |
| MS.gene80842.t1 | AT5G14980 | 31.741 | 293 | 199 | 1 | 55 | 347 | 29 | 320 | 1.34e-58 | 192 |
| MS.gene80842.t1 | AT5G19290 | 32.095 | 296 | 197 | 3 | 55 | 348 | 29 | 322 | 1.48e-56 | 187 |
| MS.gene80842.t1 | AT1G52760 | 35.374 | 294 | 181 | 5 | 52 | 341 | 34 | 322 | 4.35e-56 | 186 |
| MS.gene80842.t1 | AT2G39400 | 42.534 | 221 | 126 | 1 | 55 | 275 | 2 | 221 | 2.36e-55 | 181 |
| MS.gene80842.t1 | AT1G73480 | 32.248 | 307 | 193 | 9 | 40 | 342 | 167 | 462 | 4.89e-36 | 136 |
| MS.gene80842.t1 | AT5G11650 | 32.209 | 326 | 194 | 13 | 26 | 339 | 65 | 375 | 1.45e-33 | 128 |
| MS.gene80842.t1 | AT1G18360 | 30.744 | 309 | 196 | 11 | 40 | 342 | 85 | 381 | 1.45e-31 | 122 |
| MS.gene80842.t1 | AT2G39410 | 37.736 | 106 | 66 | 0 | 50 | 155 | 3 | 108 | 3.15e-23 | 93.6 |
| MS.gene80842.t1 | AT5G11650 | 34.416 | 154 | 91 | 4 | 26 | 173 | 65 | 214 | 3.09e-19 | 87.0 |
Find 65 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGATCATTGCTTATTTC+AGG | 0.168837 | 6.2:-82860970 | MS.gene80842:intron |
| GGCCTTTCTGATGGTCTTCA+TGG | 0.251668 | 6.2:-82859634 | MS.gene80842:CDS |
| TTGTGGAACTAACTTAGTTT+TGG | 0.267252 | 6.2:+82857360 | None:intergenic |
| GAGAGCAATGTTGATAGAAA+TGG | 0.296628 | 6.2:-82861102 | None:intergenic |
| TTAGGTTTCTCTGCCATTAT+TGG | 0.301593 | 6.2:-82856311 | MS.gene80842:intron |
| GCATTGGATTATCCTGGATT+TGG | 0.311932 | 6.2:-82859655 | MS.gene80842:CDS |
| AATTTACCAAGCTTCTTGTT+AGG | 0.343853 | 6.2:-82858848 | MS.gene80842:CDS |
| CTTGTAAAATAACACATTAT+AGG | 0.353208 | 6.2:+82857055 | None:intergenic |
| TCTCCATGCATGACCAATAA+TGG | 0.365229 | 6.2:+82856298 | None:intergenic |
| TTGTAAAATAACACATTATA+GGG | 0.370829 | 6.2:+82857056 | None:intergenic |
| AAGTTAGCATCATCTGGATT+TGG | 0.386995 | 6.2:-82859685 | MS.gene80842:CDS |
| ACTTGCTCGTGAGGCTTTCA+AGG | 0.395133 | 6.2:-82861006 | MS.gene80842:CDS |
| TCACGAGCAAGTCTTCTTGC+AGG | 0.399430 | 6.2:+82861017 | None:intergenic |
| TGCTTGATGATATTATATCT+TGG | 0.399615 | 6.2:-82856138 | MS.gene80842:CDS |
| TAAAAGTATTCTCTAAAAGT+TGG | 0.404034 | 6.2:-82859927 | MS.gene80842:CDS |
| AGAGCAATGTTGATAGAAAT+GGG | 0.405253 | 6.2:-82861101 | None:intergenic |
| TCCAAAGCTGTTCCTAGTCT+TGG | 0.412220 | 6.2:+82857026 | None:intergenic |
| GTATTTGCATTGGATTATCC+TGG | 0.418401 | 6.2:-82859661 | MS.gene80842:CDS |
| CCTGGATTTGGCCTTTCTGA+TGG | 0.419264 | 6.2:-82859643 | MS.gene80842:CDS |
| TAACAAACAATGGCCTTCAT+AGG | 0.423794 | 6.2:+82859889 | None:intergenic |
| GCAAGGAAGTTAGCATCATC+TGG | 0.425906 | 6.2:-82859691 | MS.gene80842:CDS |
| ACCAAGACTAGGAACAGCTT+TGG | 0.447184 | 6.2:-82857027 | MS.gene80842:CDS |
| ACAAGAGCTAGAACAAAGAT+TGG | 0.453331 | 6.2:-82856988 | MS.gene80842:CDS |
| CTTCTTGTTAGGTGAGTCAA+TGG | 0.454001 | 6.2:-82858837 | MS.gene80842:CDS |
| TTGGTGAAGCAAATACTAAT+TGG | 0.467466 | 6.2:-82857400 | MS.gene80842:CDS |
| TTCATCTTCACTCCATCAGC+TGG | 0.472455 | 6.2:+82860247 | None:intergenic |
| GCCATTGTTTGTTATTGTCA+TGG | 0.480168 | 6.2:-82859880 | MS.gene80842:CDS |
| CTGAAATAAGCAATGATCAA+TGG | 0.484684 | 6.2:+82860971 | None:intergenic |
| ATAGAAATGGGAGAAATAGA+AGG | 0.489695 | 6.2:-82861089 | MS.gene80842:CDS |
| TGCAGGTGCCTCATCCATGT+TGG | 0.500494 | 6.2:+82861034 | None:intergenic |
| AACTAAGTTAGTTCCACAAA+AGG | 0.503876 | 6.2:-82857356 | MS.gene80842:CDS |
| GACTCACCTAACAAGAAGCT+TGG | 0.508716 | 6.2:+82858842 | None:intergenic |
| GTTCACCCTCTAGAAGTGTA+TGG | 0.511259 | 6.2:+82856182 | None:intergenic |
| TGGATTTGGAGTATTTGCAT+TGG | 0.516167 | 6.2:-82859671 | MS.gene80842:CDS |
| GGATATGATTCCACATTGGT+TGG | 0.516523 | 6.2:-82857419 | MS.gene80842:CDS |
| TCTTATTGCACCTTTGTGCA+AGG | 0.518796 | 6.2:-82858756 | MS.gene80842:intron |
| CCATCAGAAAGGCCAAATCC+AGG | 0.524054 | 6.2:+82859643 | None:intergenic |
| TTATTTGTCCAACATGGATG+AGG | 0.527852 | 6.2:-82861042 | MS.gene80842:CDS |
| CTGCCATTATTGGTCATGCA+TGG | 0.530213 | 6.2:-82856301 | MS.gene80842:CDS |
| AATACTAATTGGTGTAGCTA+AGG | 0.532434 | 6.2:-82857389 | MS.gene80842:CDS |
| TACAATGCCTTGCTAGCTGA+TGG | 0.536619 | 6.2:+82856256 | None:intergenic |
| AGAAATAGAAGGAATGAGTG+AGG | 0.538123 | 6.2:-82861078 | MS.gene80842:CDS |
| TTTCAAACAACCTACTGCAT+GGG | 0.547182 | 6.2:-82858789 | MS.gene80842:CDS |
| AACTGATCCATCAGCTAGCA+AGG | 0.547422 | 6.2:-82856263 | MS.gene80842:CDS |
| ATTTCAAACAACCTACTGCA+TGG | 0.552822 | 6.2:-82858790 | MS.gene80842:CDS |
| TGCAAGAAGACTTGCTCGTG+AGG | 0.575045 | 6.2:-82861015 | MS.gene80842:CDS |
| AACCATGAAGACCATCAGAA+AGG | 0.582051 | 6.2:+82859632 | None:intergenic |
| ACCATGACAATAACAAACAA+TGG | 0.586205 | 6.2:+82859879 | None:intergenic |
| AGTTTGAATGACAGAACAAG+TGG | 0.590912 | 6.2:-82858879 | MS.gene80842:intron |
| AAGCATTTATTTGTCCAACA+TGG | 0.591273 | 6.2:-82861048 | MS.gene80842:CDS |
| TGCCTTCCATACACTTCTAG+AGG | 0.592359 | 6.2:-82856188 | MS.gene80842:CDS |
| CAGAGGATATGATTCCACAT+TGG | 0.593878 | 6.2:-82857423 | MS.gene80842:CDS |
| TTCTTGTTAGGTGAGTCAAT+GGG | 0.597181 | 6.2:-82858836 | MS.gene80842:CDS |
| ACCCTCTAGAAGTGTATGGA+AGG | 0.598219 | 6.2:+82856186 | None:intergenic |
| GTTTATGAAGTGAACTCAAG+AGG | 0.605140 | 6.2:-82859952 | MS.gene80842:CDS |
| TGATGGAGTGAAGATGAAAG+AGG | 0.607893 | 6.2:-82860242 | MS.gene80842:intron |
| GAATGAGATACCTTGCACAA+AGG | 0.610625 | 6.2:+82858746 | None:intergenic |
| GCAGCACCATCCCATGCAGT+AGG | 0.619128 | 6.2:+82858779 | None:intergenic |
| TACAAGGATAAACCAAGACT+AGG | 0.619655 | 6.2:-82857038 | MS.gene80842:CDS |
| AAACAACCTACTGCATGGGA+TGG | 0.621228 | 6.2:-82858785 | MS.gene80842:CDS |
| CTGTATTGAACAGTTTGCAG+AGG | 0.640949 | 6.2:-82857440 | MS.gene80842:intron |
| TTGTTAGGTGAGTCAATGGG+AGG | 0.643294 | 6.2:-82858833 | MS.gene80842:CDS |
| ATTTGCTTCACCAACCAATG+TGG | 0.645634 | 6.2:+82857409 | None:intergenic |
| GCCTTCCATACACTTCTAGA+GGG | 0.655558 | 6.2:-82856187 | MS.gene80842:CDS |
| ATTATTGGTCATGCATGGAG+AGG | 0.688426 | 6.2:-82856296 | MS.gene80842:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAATACTTCAATAATA+TGG | - | chr6.2:82859506-82859525 | MS.gene80842:intron | 10.0% |
| !!! | AATTTATTTTTCTTAAATAG+TGG | - | chr6.2:82859022-82859041 | MS.gene80842:intron | 10.0% |
| !!! | CTAAAAAAATATTTTCATTA+AGG | + | chr6.2:82860358-82860377 | None:intergenic | 10.0% |
| !!! | TGAATAATTTCAAATATTTT+TGG | - | chr6.2:82857218-82857237 | MS.gene80842:intron | 10.0% |
| !!! | TTTGAAATTATAAAAATTAG+AGG | + | chr6.2:82859344-82859363 | None:intergenic | 10.0% |
| !! | AAAAATTTCATTTACTTTGA+TGG | + | chr6.2:82860388-82860407 | None:intergenic | 15.0% |
| !! | AAATAATGAAAATGAGAAAT+TGG | + | chr6.2:82858272-82858291 | None:intergenic | 15.0% |
| !! | AAATGCATATAAAAATTACA+TGG | - | chr6.2:82857804-82857823 | MS.gene80842:intron | 15.0% |
| !! | AATAATCTTTGTATACTTTA+AGG | - | chr6.2:82857776-82857795 | MS.gene80842:intron | 15.0% |
| !! | AGTGCATATTTAATTATTAA+GGG | - | chr6.2:82859102-82859121 | MS.gene80842:intron | 15.0% |
| !! | CTAAATTGAATAATGTTATT+TGG | + | chr6.2:82860333-82860352 | None:intergenic | 15.0% |
| !! | TAGTGCATATTTAATTATTA+AGG | - | chr6.2:82859101-82859120 | MS.gene80842:intron | 15.0% |
| !! | TCATTATTTAAAAAAGTTAC+TGG | - | chr6.2:82857938-82857957 | MS.gene80842:intron | 15.0% |
| !! | TTGTAAAATAACACATTATA+GGG | + | chr6.2:82860144-82860163 | None:intergenic | 15.0% |
| !!! | AAATTAGAGGATTATATTTT+TGG | + | chr6.2:82859331-82859350 | None:intergenic | 15.0% |
| !!! | AATTTAACCAATTTTAAGTT+TGG | + | chr6.2:82856739-82856758 | None:intergenic | 15.0% |
| !!! | TATATTTTTGGATTTAGAAA+TGG | + | chr6.2:82859319-82859338 | None:intergenic | 15.0% |
| !!! | TGTATATTTTAACATAAGAA+AGG | - | chr6.2:82859192-82859211 | MS.gene80842:intron | 15.0% |
| !!! | TGTATATTTTAACATAAGAT+AGG | + | chr6.2:82858562-82858581 | None:intergenic | 15.0% |
| !!! | TTTATCTTGTATTTTTTATC+AGG | - | chr6.2:82857479-82857498 | MS.gene80842:intron | 15.0% |
| !! | AAAATAAGCCTAAAATTTAG+AGG | + | chr6.2:82859377-82859396 | None:intergenic | 20.0% |
| !! | AAAATGAGAAATTGGTATAA+GGG | + | chr6.2:82858264-82858283 | None:intergenic | 20.0% |
| !! | AAATACATATTTGAACATCA+AGG | - | chr6.2:82856283-82856302 | MS.gene80842:CDS | 20.0% |
| !! | AATCATGAATAAGAAGAAAT+TGG | + | chr6.2:82859287-82859306 | None:intergenic | 20.0% |
| !! | CATATTTAATTATTAAGGGA+GGG | - | chr6.2:82859106-82859125 | MS.gene80842:intron | 20.0% |
| !! | CATCAAAACAATTAAAATTG+TGG | - | chr6.2:82860438-82860457 | MS.gene80842:intron | 20.0% |
| !! | CTTGTAAAATAACACATTAT+AGG | + | chr6.2:82860145-82860164 | None:intergenic | 20.0% |
| !! | GAACATTTCTCAAAAATAAA+AGG | - | chr6.2:82857626-82857645 | MS.gene80842:intron | 20.0% |
| !! | TATCTATCCAAACTTAAAAT+TGG | - | chr6.2:82856729-82856748 | MS.gene80842:intron | 20.0% |
| !! | TTTAAAAATGAGACTGAAAT+CGG | + | chr6.2:82858172-82858191 | None:intergenic | 20.0% |
| !! | TTTAGAAAAAATAGTATTGC+AGG | - | chr6.2:82858751-82858770 | MS.gene80842:intron | 20.0% |
| !! | TTTATCATCCAAATCATTTA+TGG | + | chr6.2:82857997-82858016 | None:intergenic | 20.0% |
| !!! | AATGTAGATTTTAACATAAG+AGG | + | chr6.2:82858667-82858686 | None:intergenic | 20.0% |
| !!! | AATTTCAAATATTTTTGGAC+AGG | - | chr6.2:82857223-82857242 | MS.gene80842:intron | 20.0% |
| !!! | ACAAATATTTCTGGAATTTT+AGG | - | chr6.2:82859691-82859710 | MS.gene80842:CDS | 20.0% |
| !!! | ACATACAAAGTATTAAGATA+AGG | + | chr6.2:82860818-82860837 | None:intergenic | 20.0% |
| !!! | AGTATAAATCTTACTTTTCA+AGG | - | chr6.2:82859161-82859180 | MS.gene80842:intron | 20.0% |
| !!! | ATATTTTAACATAAGATAGG+AGG | + | chr6.2:82858559-82858578 | None:intergenic | 20.0% |
| !!! | ATGTAATTCAATTTTCTCTT+AGG | + | chr6.2:82858636-82858655 | None:intergenic | 20.0% |
| !!! | ATGTAGATTTTAACATAAGA+GGG | + | chr6.2:82858666-82858685 | None:intergenic | 20.0% |
| !!! | ATTGAAAATTTTTCATTGCT+TGG | - | chr6.2:82856812-82856831 | MS.gene80842:intron | 20.0% |
| !!! | CAAATTTTAGAACTTGATTA+GGG | + | chr6.2:82860683-82860702 | None:intergenic | 20.0% |
| !!! | CTAATATGTTTTGAATAAGA+GGG | + | chr6.2:82858593-82858612 | None:intergenic | 20.0% |
| !!! | CTAATTTTGATTTTTGTTCT+AGG | - | chr6.2:82860116-82860135 | MS.gene80842:intron | 20.0% |
| !!! | CTATAATGTGTTATTTTACA+AGG | - | chr6.2:82860143-82860162 | MS.gene80842:intron | 20.0% |
| !!! | GATACATAAGTTTTTTCTTT+AGG | - | chr6.2:82856672-82856691 | MS.gene80842:intron | 20.0% |
| !!! | GTATAAATCTTACTTTTCAA+GGG | - | chr6.2:82859162-82859181 | MS.gene80842:intron | 20.0% |
| !!! | GTATTTGTTAAGAGAAAAAA+AGG | + | chr6.2:82856269-82856288 | None:intergenic | 20.0% |
| !!! | TAAAAGTATTCTCTAAAAGT+TGG | - | chr6.2:82857270-82857289 | MS.gene80842:intron | 20.0% |
| !!! | TAATATGTTTTGAATAAGAG+GGG | + | chr6.2:82858592-82858611 | None:intergenic | 20.0% |
| !!! | TATTGTATGATTTGAAACAA+AGG | + | chr6.2:82857665-82857684 | None:intergenic | 20.0% |
| !!! | TCAAATTTTAGAACTTGATT+AGG | + | chr6.2:82860684-82860703 | None:intergenic | 20.0% |
| !!! | TCTAATATGTTTTGAATAAG+AGG | + | chr6.2:82858594-82858613 | None:intergenic | 20.0% |
| !!! | TGTAATTCAATTTTCTCTTA+GGG | + | chr6.2:82858635-82858654 | None:intergenic | 20.0% |
| !!! | TTTCTTCTTATTCATGATTT+TGG | - | chr6.2:82859288-82859307 | MS.gene80842:intron | 20.0% |
| !!! | TTTTGAAGGAAAAAATTACA+TGG | - | chr6.2:82857835-82857854 | MS.gene80842:intron | 20.0% |
| ! | AAGTAATGACCTTAAGATAA+AGG | + | chr6.2:82860634-82860653 | None:intergenic | 25.0% |
| ! | AAGTCACAAATTCAATTGTA+GGG | - | chr6.2:82859612-82859631 | MS.gene80842:CDS | 25.0% |
| ! | AATAGAGGAACAAATATTTC+TGG | - | chr6.2:82859682-82859701 | MS.gene80842:CDS | 25.0% |
| ! | AATCCGATTATACCTTAATT+TGG | + | chr6.2:82858114-82858133 | None:intergenic | 25.0% |
| ! | AATCTGATTCAACCAAATTA+AGG | - | chr6.2:82858099-82858118 | MS.gene80842:intron | 25.0% |
| ! | AATGTTTGACCAATTTGTAT+AGG | - | chr6.2:82857895-82857914 | MS.gene80842:intron | 25.0% |
| ! | ACATGAAAAATAGTTTCATC+AGG | + | chr6.2:82861040-82861059 | None:intergenic | 25.0% |
| ! | ATAAACCAAGACAATATTTC+TGG | - | chr6.2:82859652-82859671 | MS.gene80842:CDS | 25.0% |
| ! | CAACCAAATTAAGGTATAAT+CGG | - | chr6.2:82858108-82858127 | MS.gene80842:intron | 25.0% |
| ! | CAATATAAGAAATAGGAATC+TGG | - | chr6.2:82857054-82857073 | MS.gene80842:CDS | 25.0% |
| ! | CAATATACGAAAAAAGAATG+TGG | + | chr6.2:82857146-82857165 | None:intergenic | 25.0% |
| ! | CGATTTAACCATAAATGATT+TGG | - | chr6.2:82857986-82858005 | MS.gene80842:intron | 25.0% |
| ! | GAAAAAATGACTAAATTGAC+CGG | - | chr6.2:82860471-82860490 | MS.gene80842:intron | 25.0% |
| ! | GAAAATGAGAAATTGGTATA+AGG | + | chr6.2:82858265-82858284 | None:intergenic | 25.0% |
| ! | GAAATATTTCAACATGTTCT+TGG | - | chr6.2:82860702-82860721 | MS.gene80842:intron | 25.0% |
| ! | GCATATTTAATTATTAAGGG+AGG | - | chr6.2:82859105-82859124 | MS.gene80842:intron | 25.0% |
| ! | GTAATTCAAACATCTTTGAA+AGG | + | chr6.2:82858531-82858550 | None:intergenic | 25.0% |
| ! | GTGACTATAAATGAATTGTT+AGG | - | chr6.2:82860868-82860887 | MS.gene80842:intron | 25.0% |
| ! | TAAATCCAGAAATATTGTCT+TGG | + | chr6.2:82859660-82859679 | None:intergenic | 25.0% |
| ! | TAAGTCACAAATTCAATTGT+AGG | - | chr6.2:82859611-82859630 | MS.gene80842:CDS | 25.0% |
| ! | TAATCAGTTAATGGCTAAAT+CGG | - | chr6.2:82858146-82858165 | MS.gene80842:intron | 25.0% |
| ! | TAATTTGGTTGAATCAGATT+GGG | + | chr6.2:82858099-82858118 | None:intergenic | 25.0% |
| ! | TACATACTTGTATGATACTA+GGG | + | chr6.2:82857011-82857030 | None:intergenic | 25.0% |
| ! | TACTAACACTTACAATTTCA+AGG | - | chr6.2:82860549-82860568 | MS.gene80842:intron | 25.0% |
| ! | TGAAAAGAAAGTAACTAAGA+TGG | + | chr6.2:82860250-82860269 | None:intergenic | 25.0% |
| ! | TGTAATTCAAGCATCATATA+GGG | - | chr6.2:82859132-82859151 | MS.gene80842:intron | 25.0% |
| ! | TTACATACTTGTATGATACT+AGG | + | chr6.2:82857012-82857031 | None:intergenic | 25.0% |
| ! | TTACCAAAGACAATAAAACA+TGG | - | chr6.2:82858904-82858923 | MS.gene80842:intron | 25.0% |
| ! | TTATAGAATGATACACAAGT+TGG | - | chr6.2:82856497-82856516 | MS.gene80842:intron | 25.0% |
| ! | TTCCTTTATCTCATTCTTTA+TGG | - | chr6.2:82857703-82857722 | MS.gene80842:intron | 25.0% |
| ! | TTGTAATTCAAGCATCATAT+AGG | - | chr6.2:82859131-82859150 | MS.gene80842:intron | 25.0% |
| !! | AAAAAAGAATGTGGACTATA+AGG | + | chr6.2:82857137-82857156 | None:intergenic | 25.0% |
| !! | ATTGTGTTTATTTCCCTTTT+TGG | - | chr6.2:82856614-82856633 | MS.gene80842:intron | 25.0% |
| !! | ATTTCTGGATTTAGAAATAG+AGG | - | chr6.2:82859667-82859686 | MS.gene80842:CDS | 25.0% |
| !! | CTTAGTCAAATTTTACACTA+AGG | + | chr6.2:82856403-82856422 | None:intergenic | 25.0% |
| !! | GCTTTTTGTTGAAATGTTTT+GGG | - | chr6.2:82857740-82857759 | MS.gene80842:intron | 25.0% |
| !! | GTAATTCAATTTTCTCTTAG+GGG | + | chr6.2:82858634-82858653 | None:intergenic | 25.0% |
| !! | GTTTCAATGCATATTTCTTT+TGG | - | chr6.2:82859434-82859453 | MS.gene80842:intron | 25.0% |
| !! | TAGTCACTTCAATATTTTCA+AGG | + | chr6.2:82860855-82860874 | None:intergenic | 25.0% |
| !! | TGAAGTTGATCTTCATATTA+AGG | + | chr6.2:82860299-82860318 | None:intergenic | 25.0% |
| !! | TGCTTGATGATATTATATCT+TGG | - | chr6.2:82861059-82861078 | MS.gene80842:CDS | 25.0% |
| !! | TGGTCTTCTCTTATTTATAA+GGG | + | chr6.2:82857081-82857100 | None:intergenic | 25.0% |
| !! | TTAATTTGGTTGAATCAGAT+TGG | + | chr6.2:82858100-82858119 | None:intergenic | 25.0% |
| !! | TTGGTCTTCTCTTATTTATA+AGG | + | chr6.2:82857082-82857101 | None:intergenic | 25.0% |
| !!! | ACATGGACTTTTTTTTTTGA+AGG | - | chr6.2:82857821-82857840 | MS.gene80842:intron | 25.0% |
| !!! | AGTCACATTTTTTGAAAAAG+AGG | - | chr6.2:82856357-82856376 | MS.gene80842:intron | 25.0% |
| !!! | ATTTTAACATAAGAAAGGAG+AGG | - | chr6.2:82859197-82859216 | MS.gene80842:intron | 25.0% |
| !!! | TAACCATGTTTTATTGTCTT+TGG | + | chr6.2:82858910-82858929 | None:intergenic | 25.0% |
| !!! | TGCTTTTTGTTGAAATGTTT+TGG | - | chr6.2:82857739-82857758 | MS.gene80842:intron | 25.0% |
| !!! | TGTAGATTTTAACATAAGAG+GGG | + | chr6.2:82858665-82858684 | None:intergenic | 25.0% |
| AAAATTTCCACATGCCAAAA+AGG | + | chr6.2:82856631-82856650 | None:intergenic | 30.0% | |
| AAATTTCCACATGCCAAAAA+GGG | + | chr6.2:82856630-82856649 | None:intergenic | 30.0% | |
| AACTAAGTTAGTTCCACAAA+AGG | - | chr6.2:82859841-82859860 | MS.gene80842:intron | 30.0% | |
| AAGCATTTATTTGTCCAACA+TGG | - | chr6.2:82856149-82856168 | MS.gene80842:CDS | 30.0% | |
| AATAAAATGTCCAAACAGAG+AGG | - | chr6.2:82856873-82856892 | MS.gene80842:intron | 30.0% | |
| AATACTAATTGGTGTAGCTA+AGG | - | chr6.2:82859808-82859827 | MS.gene80842:intron | 30.0% | |
| AATTTACCAAGCTTCTTGTT+AGG | - | chr6.2:82858349-82858368 | MS.gene80842:intron | 30.0% | |
| ACCAACTAGTAATCAGTTAA+TGG | - | chr6.2:82858137-82858156 | MS.gene80842:intron | 30.0% | |
| ACCATGACAATAACAAACAA+TGG | + | chr6.2:82857321-82857340 | None:intergenic | 30.0% | |
| ATAGAAATGGGAGAAATAGA+AGG | - | chr6.2:82856108-82856127 | MS.gene80842:CDS | 30.0% | |
| ATCTATAATTCAAGCATGCA+TGG | + | chr6.2:82860058-82860077 | None:intergenic | 30.0% | |
| ATGACCTTAAGATAAAGGTT+CGG | + | chr6.2:82860629-82860648 | None:intergenic | 30.0% | |
| ATTGAGTCAAAGAGATGAAA+GGG | + | chr6.2:82857170-82857189 | None:intergenic | 30.0% | |
| CACCATAAAGAATGAGATAA+AGG | + | chr6.2:82857708-82857727 | None:intergenic | 30.0% | |
| CATTGATCATTGCTTATTTC+AGG | - | chr6.2:82856227-82856246 | MS.gene80842:CDS | 30.0% | |
| CTGAAATAAGCAATGATCAA+TGG | + | chr6.2:82856229-82856248 | None:intergenic | 30.0% | |
| GAAAGTCAAACATATTCCTT+TGG | + | chr6.2:82857115-82857134 | None:intergenic | 30.0% | |
| GTAATTCAAGCATCATATAG+GGG | - | chr6.2:82859133-82859152 | MS.gene80842:intron | 30.0% | |
| GTATGATACTAGGGATTAAA+TGG | + | chr6.2:82857002-82857021 | None:intergenic | 30.0% | |
| TAATTCAAGCATCATATAGG+GGG | - | chr6.2:82859134-82859153 | MS.gene80842:intron | 30.0% | |
| TATGTAATTAGTCAAAGAGC+TGG | - | chr6.2:82857025-82857044 | MS.gene80842:CDS | 30.0% | |
| TATTGAGTCAAAGAGATGAA+AGG | + | chr6.2:82857171-82857190 | None:intergenic | 30.0% | |
| TCAATTGTAGGGAAAATTTC+AGG | - | chr6.2:82859623-82859642 | MS.gene80842:CDS | 30.0% | |
| TCCATTAAATTGAACAATGC+CGG | + | chr6.2:82860493-82860512 | None:intergenic | 30.0% | |
| TCTATAATTCAAGCATGCAT+GGG | + | chr6.2:82860057-82860076 | None:intergenic | 30.0% | |
| TTCAGATTATAGAATCCGAA+CGG | + | chr6.2:82860750-82860769 | None:intergenic | 30.0% | |
| TTGGTGAAGCAAATACTAAT+TGG | - | chr6.2:82859797-82859816 | MS.gene80842:intron | 30.0% | |
| ! | ACACTTCACCTCTAAATTTT+AGG | - | chr6.2:82859366-82859385 | MS.gene80842:intron | 30.0% |
| ! | ATTCAAACATCTTTGAAAGG+AGG | + | chr6.2:82858528-82858547 | None:intergenic | 30.0% |
| ! | GTTTTCACTCCTATACAAAT+TGG | + | chr6.2:82857907-82857926 | None:intergenic | 30.0% |
| ! | TTCAAACATCTTTGAAAGGA+GGG | + | chr6.2:82858527-82858546 | None:intergenic | 30.0% |
| ! | TTGACTAGATTTTCAAAGCT+AGG | + | chr6.2:82857596-82857615 | None:intergenic | 30.0% |
| ! | TTGTGGAACTAACTTAGTTT+TGG | + | chr6.2:82859840-82859859 | None:intergenic | 30.0% |
| !! | AAATCTTACTTTTCAAGGGA+GGG | - | chr6.2:82859166-82859185 | MS.gene80842:intron | 30.0% |
| !! | GCATGTGGAAATTTTTCAAA+GGG | - | chr6.2:82856636-82856655 | MS.gene80842:intron | 30.0% |
| !! | GGAAATTTTTCAAAGGGAAA+AGG | - | chr6.2:82856642-82856661 | MS.gene80842:intron | 30.0% |
| !! | TAAATCTTACTTTTCAAGGG+AGG | - | chr6.2:82859165-82859184 | MS.gene80842:intron | 30.0% |
| !! | TGGTTAGTTTAGTGACATTT+AGG | + | chr6.2:82859737-82859756 | None:intergenic | 30.0% |
| !! | TGTGGAACTAACTTAGTTTT+GGG | + | chr6.2:82859839-82859858 | None:intergenic | 30.0% |
| !!! | ATTTTTTATCAGGAGTTGCA+AGG | - | chr6.2:82857489-82857508 | MS.gene80842:intron | 30.0% |
| !!! | TGTCTTTGACTTTAGCTTTT+TGG | + | chr6.2:82860967-82860986 | None:intergenic | 30.0% |
| !!! | TTCCTTTGGCTTTATTTTCT+TGG | + | chr6.2:82857101-82857120 | None:intergenic | 30.0% |
| AACTCCGAACCTTTATCTTA+AGG | - | chr6.2:82860622-82860641 | MS.gene80842:intron | 35.0% | |
| AAGTTAGCATCATCTGGATT+TGG | - | chr6.2:82857512-82857531 | MS.gene80842:intron | 35.0% | |
| AATTAGTCAAAGAGCTGGAA+GGG | - | chr6.2:82857030-82857049 | MS.gene80842:CDS | 35.0% | |
| ACAAGAGCTAGAACAAAGAT+TGG | - | chr6.2:82860209-82860228 | MS.gene80842:intron | 35.0% | |
| ACCAGAAAAATCTCCTATGA+AGG | - | chr6.2:82857295-82857314 | MS.gene80842:intron | 35.0% | |
| ACCGGCATTGTTCAATTTAA+TGG | - | chr6.2:82860489-82860508 | MS.gene80842:intron | 35.0% | |
| AGAAATAGAAGGAATGAGTG+AGG | - | chr6.2:82856119-82856138 | MS.gene80842:CDS | 35.0% | |
| AGTGTAATTCAAGCTTCTCT+TGG | - | chr6.2:82859220-82859239 | MS.gene80842:intron | 35.0% | |
| AGTTTGAATGACAGAACAAG+TGG | - | chr6.2:82858318-82858337 | MS.gene80842:intron | 35.0% | |
| ATTTCAAACAACCTACTGCA+TGG | - | chr6.2:82858407-82858426 | MS.gene80842:intron | 35.0% | |
| GAAGGGGCAATATAAGAAAT+AGG | - | chr6.2:82857047-82857066 | MS.gene80842:CDS | 35.0% | |
| GACCAAGAAAATAAAGCCAA+AGG | - | chr6.2:82857096-82857115 | MS.gene80842:intron | 35.0% | |
| GCCATTAACTGATTACTAGT+TGG | + | chr6.2:82858141-82858160 | None:intergenic | 35.0% | |
| GTATTTGCATTGGATTATCC+TGG | - | chr6.2:82857536-82857555 | MS.gene80842:intron | 35.0% | |
| GTGTAATTCAAGCTTCTCTT+GGG | - | chr6.2:82859221-82859240 | MS.gene80842:intron | 35.0% | |
| GTTTATGAAGTGAACTCAAG+AGG | - | chr6.2:82857245-82857264 | MS.gene80842:intron | 35.0% | |
| TAACAAACAATGGCCTTCAT+AGG | + | chr6.2:82857311-82857330 | None:intergenic | 35.0% | |
| TAATGAGCCAACAAATCACA+TGG | + | chr6.2:82859567-82859586 | None:intergenic | 35.0% | |
| TAATTAGTCAAAGAGCTGGA+AGG | - | chr6.2:82857029-82857048 | MS.gene80842:CDS | 35.0% | |
| TACAAGGATAAACCAAGACT+AGG | - | chr6.2:82860159-82860178 | MS.gene80842:intron | 35.0% | |
| TACTTGCGTGTGGAATTTAT+TGG | - | chr6.2:82860587-82860606 | MS.gene80842:intron | 35.0% | |
| TATATCTCAGATCGTTCAAC+TGG | + | chr6.2:82858060-82858079 | None:intergenic | 35.0% | |
| TCTTCAATGATGTGTTGTCA+CGG | - | chr6.2:82859983-82860002 | MS.gene80842:intron | 35.0% | |
| TGATCAAGTGGAAATCTCTT+TGG | - | chr6.2:82856454-82856473 | MS.gene80842:intron | 35.0% | |
| TGCAATTAATCCTCTCTGTT+TGG | + | chr6.2:82856886-82856905 | None:intergenic | 35.0% | |
| TGTAATTCAAGCTTCTCTTG+GGG | - | chr6.2:82859222-82859241 | MS.gene80842:intron | 35.0% | |
| TTAGGTTTCTCTGCCATTAT+TGG | - | chr6.2:82860886-82860905 | MS.gene80842:intron | 35.0% | |
| TTATGAGCTAACAAGTCACT+AGG | - | chr6.2:82859407-82859426 | MS.gene80842:intron | 35.0% | |
| TTATTTGTCCAACATGGATG+AGG | - | chr6.2:82856155-82856174 | MS.gene80842:CDS | 35.0% | |
| TTCTTGTTAGGTGAGTCAAT+GGG | - | chr6.2:82858361-82858380 | MS.gene80842:intron | 35.0% | |
| TTTCAAACAACCTACTGCAT+GGG | - | chr6.2:82858408-82858427 | MS.gene80842:intron | 35.0% | |
| ! | ACTTGCACGTTTTACTTTGA+AGG | - | chr6.2:82857350-82857369 | MS.gene80842:CDS | 35.0% |
| ! | ATTCAATTTTCTCTTAGGGG+AGG | + | chr6.2:82858631-82858650 | None:intergenic | 35.0% |
| ! | TATAGAGTGTTTATGCCGTT+CGG | - | chr6.2:82860732-82860751 | MS.gene80842:intron | 35.0% |
| ! | TCAAACATCTTTGAAAGGAG+GGG | + | chr6.2:82858526-82858545 | None:intergenic | 35.0% |
| ! | TCTTTCACTTCTTCCTTTTG+TGG | + | chr6.2:82859857-82859876 | None:intergenic | 35.0% |
| ! | TGAACGATCTGAGATATAAC+TGG | - | chr6.2:82858062-82858081 | MS.gene80842:intron | 35.0% |
| ! | TGGATTTGGAGTATTTGCAT+TGG | - | chr6.2:82857526-82857545 | MS.gene80842:intron | 35.0% |
| ! | TTCAATTTTCTCTTAGGGGA+GGG | + | chr6.2:82858630-82858649 | None:intergenic | 35.0% |
| !! | AATCTTACTTTTCAAGGGAG+GGG | - | chr6.2:82859167-82859186 | MS.gene80842:intron | 35.0% |
| !! | AATGTTGATTTACTTGCGTG+TGG | - | chr6.2:82860577-82860596 | MS.gene80842:intron | 35.0% |
| !! | AGATTTTAACATAAGAGGGG+AGG | + | chr6.2:82858662-82858681 | None:intergenic | 35.0% |
| !! | CACGTTTTACTTTGAAGGTA+TGG | - | chr6.2:82857355-82857374 | MS.gene80842:CDS | 35.0% |
| !! | GATTTTAACATAAGAGGGGA+GGG | + | chr6.2:82858661-82858680 | None:intergenic | 35.0% |
| !! | GCCATTGTTTGTTATTGTCA+TGG | - | chr6.2:82857317-82857336 | MS.gene80842:CDS | 35.0% |
| !! | GGCATGTGGAAATTTTTCAA+AGG | - | chr6.2:82856635-82856654 | MS.gene80842:intron | 35.0% |
| !! | GTTCAACTGGTTCATACTTT+TGG | + | chr6.2:82858047-82858066 | None:intergenic | 35.0% |
| !! | TTATTTCCCTTTTTGGCATG+TGG | - | chr6.2:82856621-82856640 | MS.gene80842:intron | 35.0% |
| AACCATGAAGACCATCAGAA+AGG | + | chr6.2:82857568-82857587 | None:intergenic | 40.0% | |
| ATTAGTCAAAGAGCTGGAAG+GGG | - | chr6.2:82857031-82857050 | MS.gene80842:CDS | 40.0% | |
| ATTATTGGTCATGCATGGAG+AGG | - | chr6.2:82860901-82860920 | MS.gene80842:intron | 40.0% | |
| ATTTGCTTCACCAACCAATG+TGG | + | chr6.2:82859791-82859810 | None:intergenic | 40.0% | |
| CAAGTGGAAATCTCTTTGGA+GGG | - | chr6.2:82856458-82856477 | MS.gene80842:intron | 40.0% | |
| CAATGTGAGAGATGATCAAG+TGG | - | chr6.2:82856442-82856461 | MS.gene80842:intron | 40.0% | |
| CAGAGGATATGATTCCACAT+TGG | - | chr6.2:82859774-82859793 | MS.gene80842:intron | 40.0% | |
| CTGCAAACTGTTCAATACAG+TGG | + | chr6.2:82859757-82859776 | None:intergenic | 40.0% | |
| CTGTATTGAACAGTTTGCAG+AGG | - | chr6.2:82859757-82859776 | MS.gene80842:intron | 40.0% | |
| CTTCTTGTTAGGTGAGTCAA+TGG | - | chr6.2:82858360-82858379 | MS.gene80842:intron | 40.0% | |
| GAATGAGATACCTTGCACAA+AGG | + | chr6.2:82858454-82858473 | None:intergenic | 40.0% | |
| GCATTGGATTATCCTGGATT+TGG | - | chr6.2:82857542-82857561 | MS.gene80842:intron | 40.0% | |
| GGATATGATTCCACATTGGT+TGG | - | chr6.2:82859778-82859797 | MS.gene80842:intron | 40.0% | |
| GTAATTCAAGCTTCTCTTGG+GGG | - | chr6.2:82859223-82859242 | MS.gene80842:intron | 40.0% | |
| GTTGAATCAGATTGGGCAAA+GGG | + | chr6.2:82858092-82858111 | None:intergenic | 40.0% | |
| TCAAGTGGAAATCTCTTTGG+AGG | - | chr6.2:82856457-82856476 | MS.gene80842:intron | 40.0% | |
| TCTCCATGCATGACCAATAA+TGG | + | chr6.2:82860902-82860921 | None:intergenic | 40.0% | |
| TCTTATTGCACCTTTGTGCA+AGG | - | chr6.2:82858441-82858460 | MS.gene80842:intron | 40.0% | |
| TGAGAAATTGGTATAAGGGC+TGG | + | chr6.2:82858260-82858279 | None:intergenic | 40.0% | |
| TGATGGAGTGAAGATGAAAG+AGG | - | chr6.2:82856955-82856974 | MS.gene80842:intron | 40.0% | |
| TGTGGAATTTATTGGCGGTA+GGG | - | chr6.2:82860595-82860614 | MS.gene80842:intron | 40.0% | |
| TTGCGTGTGGAATTTATTGG+CGG | - | chr6.2:82860590-82860609 | MS.gene80842:intron | 40.0% | |
| ! | GCCTTCATAGGAGATTTTTC+TGG | + | chr6.2:82857299-82857318 | None:intergenic | 40.0% |
| ! | TCAATTTTCTCTTAGGGGAG+GGG | + | chr6.2:82858629-82858648 | None:intergenic | 40.0% |
| ! | TTTTTGCAGTTACCAGCTGA+TGG | - | chr6.2:82856938-82856957 | MS.gene80842:intron | 40.0% |
| !! | TGTTTTGAATAAGAGGGGAG+AGG | + | chr6.2:82858587-82858606 | None:intergenic | 40.0% |
| AAACAACCTACTGCATGGGA+TGG | - | chr6.2:82858412-82858431 | MS.gene80842:intron | 45.0% | |
| AACTGATCCATCAGCTAGCA+AGG | - | chr6.2:82860934-82860953 | MS.gene80842:intron | 45.0% | |
| ACCAAGACTAGGAACAGCTT+TGG | - | chr6.2:82860170-82860189 | MS.gene80842:intron | 45.0% | |
| CTGCCATTATTGGTCATGCA+TGG | - | chr6.2:82860896-82860915 | MS.gene80842:intron | 45.0% | |
| GACTCACCTAACAAGAAGCT+TGG | + | chr6.2:82858358-82858377 | None:intergenic | 45.0% | |
| GCAAGGAAGTTAGCATCATC+TGG | - | chr6.2:82857506-82857525 | MS.gene80842:intron | 45.0% | |
| GCCTTCCATACACTTCTAGA+GGG | - | chr6.2:82861010-82861029 | MS.gene80842:CDS | 45.0% | |
| GGTTGAATCAGATTGGGCAA+AGG | + | chr6.2:82858093-82858112 | None:intergenic | 45.0% | |
| GTGTGGAATTTATTGGCGGT+AGG | - | chr6.2:82860594-82860613 | MS.gene80842:intron | 45.0% | |
| TACAATGCCTTGCTAGCTGA+TGG | + | chr6.2:82860944-82860963 | None:intergenic | 45.0% | |
| TCCAAAGCTGTTCCTAGTCT+TGG | + | chr6.2:82860174-82860193 | None:intergenic | 45.0% | |
| TGCCTTCCATACACTTCTAG+AGG | - | chr6.2:82861009-82861028 | MS.gene80842:CDS | 45.0% | |
| TTCAAGCATCATATAGGGGG+TGG | - | chr6.2:82859137-82859156 | MS.gene80842:intron | 45.0% | |
| TTCATCTTCACTCCATCAGC+TGG | + | chr6.2:82856953-82856972 | None:intergenic | 45.0% | |
| TTGTTAGGTGAGTCAATGGG+AGG | - | chr6.2:82858364-82858383 | MS.gene80842:intron | 45.0% | |
| ! | ACCCTCTAGAAGTGTATGGA+AGG | + | chr6.2:82861014-82861033 | None:intergenic | 45.0% |
| ! | CGCATCACCATGTGATTTGT+TGG | - | chr6.2:82859557-82859576 | MS.gene80842:intron | 45.0% |
| ! | GTTCACCCTCTAGAAGTGTA+TGG | + | chr6.2:82861018-82861037 | None:intergenic | 45.0% |
| !! | ATAAATAAAAAAATTATTGA+GGG | + | chr6.2:82858695-82858714 | None:intergenic | 5.0% |
| !! | TATAAATAAAAAAATTATTG+AGG | + | chr6.2:82858696-82858715 | None:intergenic | 5.0% |
| !!! | ACATATTTTAATTTTATTTT+TGG | + | chr6.2:82858878-82858897 | None:intergenic | 5.0% |
| !!! | TAAAAAAATATTTTCATTAA+GGG | + | chr6.2:82860357-82860376 | None:intergenic | 5.0% |
| ACTTGCTCGTGAGGCTTTCA+AGG | - | chr6.2:82856191-82856210 | MS.gene80842:CDS | 50.0% | |
| ATTCAAGCTTCTCTTGGGGG+AGG | - | chr6.2:82859226-82859245 | MS.gene80842:intron | 50.0% | |
| CCATCAGAAAGGCCAAATCC+AGG | + | chr6.2:82857557-82857576 | None:intergenic | 50.0% | |
| GGCCTTTCTGATGGTCTTCA+TGG | - | chr6.2:82857563-82857582 | MS.gene80842:intron | 50.0% | |
| TCACGAGCAAGTCTTCTTGC+AGG | + | chr6.2:82856183-82856202 | None:intergenic | 50.0% | |
| TTCAAGCTTCTCTTGGGGGA+GGG | - | chr6.2:82859227-82859246 | MS.gene80842:intron | 50.0% | |
| ! | CCTGGATTTGGCCTTTCTGA+TGG | - | chr6.2:82857554-82857573 | MS.gene80842:intron | 50.0% |
| ! | TGCAAGAAGACTTGCTCGTG+AGG | - | chr6.2:82856182-82856201 | MS.gene80842:CDS | 50.0% |
| TCAAGCTTCTCTTGGGGGAG+GGG | - | chr6.2:82859228-82859247 | MS.gene80842:intron | 55.0% | |
| TGCAGGTGCCTCATCCATGT+TGG | + | chr6.2:82856166-82856185 | None:intergenic | 55.0% | |
| GCAGCACCATCCCATGCAGT+AGG | + | chr6.2:82858421-82858440 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 82856102 | 82861117 | 82856102 | ID=MS.gene80842 |
| chr6.2 | mRNA | 82856102 | 82861117 | 82856102 | ID=MS.gene80842.t1;Parent=MS.gene80842 |
| chr6.2 | exon | 82860971 | 82861117 | 82860971 | ID=MS.gene80842.t1.exon1;Parent=MS.gene80842.t1 |
| chr6.2 | CDS | 82860971 | 82861117 | 82860971 | ID=cds.MS.gene80842.t1;Parent=MS.gene80842.t1 |
| chr6.2 | exon | 82860243 | 82860272 | 82860243 | ID=MS.gene80842.t1.exon2;Parent=MS.gene80842.t1 |
| chr6.2 | CDS | 82860243 | 82860272 | 82860243 | ID=cds.MS.gene80842.t1;Parent=MS.gene80842.t1 |
| chr6.2 | exon | 82859848 | 82859974 | 82859848 | ID=MS.gene80842.t1.exon3;Parent=MS.gene80842.t1 |
| chr6.2 | CDS | 82859848 | 82859974 | 82859848 | ID=cds.MS.gene80842.t1;Parent=MS.gene80842.t1 |
| chr6.2 | exon | 82859572 | 82859718 | 82859572 | ID=MS.gene80842.t1.exon4;Parent=MS.gene80842.t1 |
| chr6.2 | CDS | 82859572 | 82859718 | 82859572 | ID=cds.MS.gene80842.t1;Parent=MS.gene80842.t1 |
| chr6.2 | exon | 82858757 | 82858887 | 82858757 | ID=MS.gene80842.t1.exon5;Parent=MS.gene80842.t1 |
| chr6.2 | CDS | 82858757 | 82858887 | 82858757 | ID=cds.MS.gene80842.t1;Parent=MS.gene80842.t1 |
| chr6.2 | exon | 82857309 | 82857449 | 82857309 | ID=MS.gene80842.t1.exon6;Parent=MS.gene80842.t1 |
| chr6.2 | CDS | 82857309 | 82857449 | 82857309 | ID=cds.MS.gene80842.t1;Parent=MS.gene80842.t1 |
| chr6.2 | exon | 82856983 | 82857081 | 82856983 | ID=MS.gene80842.t1.exon7;Parent=MS.gene80842.t1 |
| chr6.2 | CDS | 82856983 | 82857081 | 82856983 | ID=cds.MS.gene80842.t1;Parent=MS.gene80842.t1 |
| chr6.2 | exon | 82856102 | 82856329 | 82856102 | ID=MS.gene80842.t1.exon8;Parent=MS.gene80842.t1 |
| chr6.2 | CDS | 82856102 | 82856329 | 82856102 | ID=cds.MS.gene80842.t1;Parent=MS.gene80842.t1 |
| Gene Sequence |
| Protein sequence |
