Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85111.t1 | XP_003597752.1 | 95.2 | 209 | 0 | 1 | 1 | 199 | 1 | 209 | 8.60E-109 | 402.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85111.t1 | O24461 | 88.3 | 205 | 14 | 1 | 5 | 199 | 3 | 207 | 2.3e-102 | 372.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85111.t1 | G7II22 | 95.2 | 209 | 0 | 1 | 1 | 199 | 1 | 209 | 6.2e-109 | 402.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049424 | MS.gene85111 | 0.809969 | 1.45E-50 | -1.69E-46 |
| MS.gene049951 | MS.gene85111 | 0.800923 | 1.15E-48 | -1.69E-46 |
| MS.gene051003 | MS.gene85111 | 0.817196 | 3.74E-52 | -1.69E-46 |
| MS.gene051452 | MS.gene85111 | 0.812149 | 4.90E-51 | -1.69E-46 |
| MS.gene052954 | MS.gene85111 | 0.807344 | 5.29E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene85111 | 0.81454 | 1.46E-51 | -1.69E-46 |
| MS.gene05344 | MS.gene85111 | -0.812609 | 3.89E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene85111 | 0.816876 | 4.41E-52 | -1.69E-46 |
| MS.gene056071 | MS.gene85111 | 0.821824 | 3.29E-53 | -1.69E-46 |
| MS.gene056787 | MS.gene85111 | 0.807327 | 5.34E-50 | -1.69E-46 |
| MS.gene056849 | MS.gene85111 | 0.805807 | 1.12E-49 | -1.69E-46 |
| MS.gene057108 | MS.gene85111 | 0.801065 | 1.07E-48 | -1.69E-46 |
| MS.gene057109 | MS.gene85111 | 0.804624 | 1.98E-49 | -1.69E-46 |
| MS.gene057110 | MS.gene85111 | 0.801591 | 8.37E-49 | -1.69E-46 |
| MS.gene057392 | MS.gene85111 | 0.83781 | 4.17E-57 | -1.69E-46 |
| MS.gene057999 | MS.gene85111 | 0.819327 | 1.23E-52 | -1.69E-46 |
| MS.gene058008 | MS.gene85111 | 0.80988 | 1.52E-50 | -1.69E-46 |
| MS.gene058054 | MS.gene85111 | 0.823332 | 1.47E-53 | -1.69E-46 |
| MS.gene058055 | MS.gene85111 | 0.806759 | 7.04E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene85111 | 0.813988 | 1.94E-51 | -1.69E-46 |
| MS.gene059290 | MS.gene85111 | 0.805476 | 1.31E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85111.t1 | MTR_2g101890 | 95.215 | 209 | 0 | 1 | 1 | 199 | 1 | 209 | 1.15e-147 | 409 |
| MS.gene85111.t1 | MTR_4g012940 | 91.220 | 205 | 8 | 1 | 5 | 199 | 3 | 207 | 1.16e-139 | 388 |
| MS.gene85111.t1 | MTR_4g069850 | 81.463 | 205 | 27 | 2 | 5 | 199 | 3 | 206 | 1.28e-121 | 342 |
| MS.gene85111.t1 | MTR_1g097420 | 70.647 | 201 | 42 | 2 | 6 | 189 | 4 | 204 | 8.20e-102 | 292 |
| MS.gene85111.t1 | MTR_1g097420 | 62.281 | 228 | 42 | 3 | 6 | 189 | 4 | 231 | 1.07e-95 | 278 |
| MS.gene85111.t1 | MTR_8g092020 | 61.353 | 207 | 70 | 1 | 1 | 197 | 3 | 209 | 1.99e-92 | 269 |
| MS.gene85111.t1 | MTR_6g039490 | 59.606 | 203 | 70 | 3 | 7 | 199 | 5 | 205 | 2.72e-80 | 239 |
| MS.gene85111.t1 | MTR_1452s0010 | 81.579 | 76 | 13 | 1 | 28 | 102 | 8 | 83 | 2.43e-40 | 133 |
| MS.gene85111.t1 | MTR_2g005510 | 36.036 | 222 | 108 | 7 | 5 | 199 | 3 | 217 | 1.18e-36 | 127 |
| MS.gene85111.t1 | MTR_2g005500 | 36.816 | 201 | 107 | 5 | 10 | 197 | 9 | 202 | 8.11e-36 | 125 |
| MS.gene85111.t1 | MTR_8g006970 | 37.313 | 201 | 106 | 5 | 10 | 197 | 22 | 215 | 1.99e-35 | 124 |
| MS.gene85111.t1 | MTR_7g081700 | 37.811 | 201 | 104 | 6 | 10 | 197 | 8 | 200 | 7.35e-35 | 122 |
| MS.gene85111.t1 | MTR_4g064897 | 38.788 | 165 | 84 | 4 | 10 | 164 | 12 | 169 | 2.04e-34 | 121 |
| MS.gene85111.t1 | MTR_1g068740 | 36.098 | 205 | 110 | 6 | 10 | 199 | 15 | 213 | 5.87e-34 | 120 |
| MS.gene85111.t1 | MTR_2g014990 | 37.563 | 197 | 95 | 7 | 10 | 186 | 13 | 201 | 6.29e-34 | 120 |
| MS.gene85111.t1 | MTR_5g013900 | 35.784 | 204 | 108 | 4 | 12 | 199 | 11 | 207 | 6.56e-34 | 120 |
| MS.gene85111.t1 | MTR_3g069510 | 38.788 | 165 | 84 | 4 | 10 | 164 | 12 | 169 | 1.02e-33 | 119 |
| MS.gene85111.t1 | MTR_1663s0010 | 70.667 | 75 | 22 | 0 | 102 | 176 | 1 | 75 | 1.21e-33 | 115 |
| MS.gene85111.t1 | MTR_1g068730 | 35.610 | 205 | 111 | 6 | 10 | 199 | 15 | 213 | 1.51e-33 | 119 |
| MS.gene85111.t1 | MTR_4g088090 | 36.548 | 197 | 97 | 7 | 10 | 186 | 13 | 201 | 2.43e-33 | 119 |
| MS.gene85111.t1 | MTR_4g079350 | 39.286 | 168 | 84 | 5 | 10 | 166 | 13 | 173 | 3.29e-33 | 118 |
| MS.gene85111.t1 | MTR_2g096550 | 37.097 | 186 | 102 | 5 | 1 | 176 | 6 | 186 | 7.01e-33 | 117 |
| MS.gene85111.t1 | MTR_1g115325 | 35.437 | 206 | 109 | 5 | 10 | 197 | 15 | 214 | 1.65e-32 | 116 |
| MS.gene85111.t1 | MTR_8g006970 | 39.011 | 182 | 93 | 5 | 10 | 181 | 8 | 181 | 1.90e-32 | 115 |
| MS.gene85111.t1 | MTR_7g100020 | 39.286 | 168 | 86 | 4 | 10 | 167 | 15 | 176 | 3.70e-32 | 115 |
| MS.gene85111.t1 | MTR_1g052475 | 37.037 | 189 | 102 | 5 | 10 | 188 | 15 | 196 | 9.74e-32 | 115 |
| MS.gene85111.t1 | MTR_3g087160 | 35.784 | 204 | 107 | 5 | 12 | 199 | 11 | 206 | 1.80e-31 | 114 |
| MS.gene85111.t1 | MTR_8g090215 | 36.765 | 204 | 106 | 5 | 12 | 199 | 11 | 207 | 1.93e-31 | 114 |
| MS.gene85111.t1 | MTR_4g099470 | 38.418 | 177 | 97 | 6 | 25 | 197 | 8 | 176 | 4.29e-31 | 112 |
| MS.gene85111.t1 | MTR_7g405790 | 35.393 | 178 | 98 | 4 | 10 | 177 | 15 | 185 | 5.02e-31 | 113 |
| MS.gene85111.t1 | MTR_2g075950 | 33.493 | 209 | 111 | 6 | 10 | 197 | 13 | 214 | 5.30e-31 | 112 |
| MS.gene85111.t1 | MTR_4g098950 | 34.975 | 203 | 110 | 4 | 12 | 199 | 11 | 206 | 8.08e-31 | 112 |
| MS.gene85111.t1 | MTR_8g036220 | 38.889 | 162 | 82 | 4 | 10 | 161 | 16 | 170 | 2.45e-30 | 111 |
| MS.gene85111.t1 | MTR_2g090865 | 35.204 | 196 | 101 | 6 | 10 | 186 | 11 | 199 | 2.86e-30 | 110 |
| MS.gene85111.t1 | MTR_1686s0010 | 67.647 | 68 | 22 | 0 | 32 | 99 | 13 | 80 | 3.81e-30 | 107 |
| MS.gene85111.t1 | MTR_7g051940 | 35.465 | 172 | 94 | 4 | 10 | 171 | 13 | 177 | 5.61e-30 | 110 |
| MS.gene85111.t1 | MTR_6g079550 | 38.095 | 168 | 86 | 5 | 10 | 166 | 12 | 172 | 1.71e-29 | 108 |
| MS.gene85111.t1 | MTR_4g063160 | 35.266 | 207 | 109 | 7 | 10 | 197 | 15 | 215 | 2.92e-29 | 108 |
| MS.gene85111.t1 | MTR_3g064390 | 33.514 | 185 | 106 | 4 | 1 | 175 | 1 | 178 | 3.36e-29 | 107 |
| MS.gene85111.t1 | MTR_6g021790 | 36.628 | 172 | 92 | 4 | 10 | 171 | 6 | 170 | 4.32e-29 | 107 |
| MS.gene85111.t1 | MTR_5g076590 | 33.514 | 185 | 106 | 4 | 1 | 175 | 1 | 178 | 4.44e-29 | 107 |
| MS.gene85111.t1 | MTR_2g083860 | 37.654 | 162 | 84 | 4 | 10 | 161 | 13 | 167 | 5.11e-29 | 107 |
| MS.gene85111.t1 | MTR_8g103550 | 33.696 | 184 | 105 | 4 | 3 | 176 | 2 | 178 | 7.45e-29 | 107 |
| MS.gene85111.t1 | MTR_3g086980 | 36.364 | 165 | 88 | 4 | 10 | 164 | 16 | 173 | 8.89e-29 | 107 |
| MS.gene85111.t1 | MTR_8g089985 | 33.721 | 172 | 97 | 4 | 3 | 164 | 10 | 174 | 1.06e-28 | 107 |
| MS.gene85111.t1 | MTR_0262s0050 | 37.576 | 165 | 86 | 4 | 10 | 164 | 15 | 172 | 1.24e-28 | 107 |
| MS.gene85111.t1 | MTR_1g078200 | 35.928 | 167 | 90 | 5 | 10 | 166 | 14 | 173 | 2.46e-28 | 106 |
| MS.gene85111.t1 | MTR_8g093740 | 38.650 | 163 | 84 | 5 | 10 | 162 | 13 | 169 | 3.63e-28 | 105 |
| MS.gene85111.t1 | MTR_8g031680 | 37.430 | 179 | 92 | 5 | 3 | 171 | 2 | 170 | 7.54e-28 | 104 |
| MS.gene85111.t1 | MTR_8g107070 | 38.272 | 162 | 83 | 4 | 10 | 161 | 14 | 168 | 8.71e-28 | 105 |
| MS.gene85111.t1 | MTR_2g027660 | 37.037 | 162 | 85 | 4 | 10 | 161 | 6 | 160 | 2.55e-27 | 103 |
| MS.gene85111.t1 | MTR_8g027220 | 36.420 | 162 | 86 | 4 | 10 | 161 | 26 | 180 | 6.51e-27 | 102 |
| MS.gene85111.t1 | MTR_1812s0010 | 60.274 | 73 | 29 | 0 | 103 | 175 | 2 | 74 | 1.27e-26 | 97.4 |
| MS.gene85111.t1 | MTR_2g093510 | 79.104 | 67 | 14 | 0 | 111 | 177 | 761 | 827 | 2.25e-26 | 105 |
| MS.gene85111.t1 | MTR_1g029450 | 34.328 | 201 | 98 | 6 | 10 | 182 | 17 | 211 | 2.73e-26 | 100 |
| MS.gene85111.t1 | MTR_8g031870 | 35.152 | 165 | 90 | 4 | 7 | 161 | 3 | 160 | 3.65e-26 | 99.8 |
| MS.gene85111.t1 | MTR_8g031660 | 36.686 | 169 | 87 | 5 | 3 | 161 | 2 | 160 | 1.51e-25 | 98.6 |
| MS.gene85111.t1 | MTR_1g062760 | 38.272 | 162 | 84 | 5 | 11 | 162 | 15 | 170 | 3.56e-25 | 97.8 |
| MS.gene85111.t1 | MTR_7g117910 | 36.486 | 148 | 76 | 4 | 10 | 147 | 20 | 159 | 4.31e-25 | 97.4 |
| MS.gene85111.t1 | MTR_3g096350 | 36.810 | 163 | 87 | 5 | 10 | 162 | 12 | 168 | 8.45e-25 | 96.7 |
| MS.gene85111.t1 | MTR_7g103070 | 38.889 | 162 | 82 | 6 | 12 | 162 | 18 | 173 | 9.59e-25 | 96.7 |
| MS.gene85111.t1 | MTR_1g068730 | 39.837 | 123 | 60 | 2 | 10 | 122 | 15 | 133 | 1.08e-24 | 95.5 |
| MS.gene85111.t1 | MTR_1g094220 | 31.868 | 182 | 106 | 5 | 7 | 177 | 28 | 202 | 1.10e-24 | 96.3 |
| MS.gene85111.t1 | MTR_1g090717 | 37.427 | 171 | 89 | 5 | 11 | 169 | 16 | 180 | 1.27e-24 | 96.3 |
| MS.gene85111.t1 | MTR_1g068740 | 39.837 | 123 | 60 | 2 | 10 | 122 | 15 | 133 | 1.47e-24 | 95.5 |
| MS.gene85111.t1 | MTR_1g094220 | 32.749 | 171 | 97 | 5 | 7 | 166 | 28 | 191 | 2.26e-24 | 95.1 |
| MS.gene85111.t1 | MTR_2g102060 | 31.579 | 190 | 113 | 4 | 12 | 191 | 12 | 194 | 2.72e-24 | 95.1 |
| MS.gene85111.t1 | MTR_1g094220 | 31.282 | 195 | 107 | 8 | 7 | 188 | 28 | 208 | 4.12e-23 | 92.8 |
| MS.gene85111.t1 | MTR_8g031830 | 34.568 | 162 | 89 | 4 | 7 | 158 | 3 | 157 | 6.01e-23 | 91.7 |
| MS.gene85111.t1 | MTR_1g094220 | 32.143 | 168 | 96 | 5 | 7 | 163 | 28 | 188 | 6.07e-23 | 91.7 |
| MS.gene85111.t1 | MTR_3g064390 | 35.606 | 132 | 71 | 2 | 1 | 122 | 1 | 128 | 1.40e-22 | 89.4 |
| MS.gene85111.t1 | MTR_8g093740 | 39.098 | 133 | 74 | 4 | 31 | 162 | 10 | 136 | 1.31e-21 | 87.4 |
| MS.gene85111.t1 | MTR_3g096350 | 38.843 | 121 | 61 | 3 | 10 | 120 | 12 | 129 | 4.71e-21 | 85.1 |
| MS.gene85111.t1 | MTR_3g096350 | 38.843 | 121 | 61 | 3 | 10 | 120 | 12 | 129 | 7.16e-21 | 85.1 |
| MS.gene85111.t1 | MTR_5g036990 | 47.561 | 82 | 41 | 2 | 19 | 99 | 21 | 101 | 2.24e-18 | 77.4 |
| MS.gene85111.t1 | MTR_6g087980 | 29.469 | 207 | 114 | 7 | 10 | 198 | 6 | 198 | 1.35e-17 | 77.8 |
| MS.gene85111.t1 | MTR_3g107717 | 31.928 | 166 | 83 | 7 | 11 | 161 | 14 | 164 | 1.54e-17 | 77.8 |
| MS.gene85111.t1 | MTR_3g107713 | 31.325 | 166 | 84 | 6 | 11 | 161 | 14 | 164 | 1.63e-17 | 77.8 |
| MS.gene85111.t1 | MTR_3g107707 | 31.325 | 166 | 84 | 6 | 11 | 161 | 14 | 164 | 1.63e-17 | 77.8 |
| MS.gene85111.t1 | MTR_4g113620 | 29.775 | 178 | 100 | 6 | 11 | 180 | 14 | 174 | 3.94e-17 | 76.6 |
| MS.gene85111.t1 | MTR_7g103070 | 40.870 | 115 | 61 | 5 | 49 | 162 | 9 | 117 | 2.18e-16 | 73.2 |
| MS.gene85111.t1 | MTR_4g088055 | 29.775 | 178 | 102 | 6 | 10 | 169 | 6 | 178 | 6.62e-15 | 70.1 |
| MS.gene85111.t1 | MTR_2g090875 | 29.213 | 178 | 103 | 6 | 10 | 169 | 6 | 178 | 3.28e-14 | 68.2 |
| MS.gene85111.t1 | MTR_5g022600 | 29.213 | 178 | 103 | 7 | 10 | 169 | 6 | 178 | 1.09e-13 | 67.0 |
| MS.gene85111.t1 | MTR_8g075240 | 29.775 | 178 | 102 | 7 | 10 | 169 | 6 | 178 | 2.04e-13 | 66.2 |
| MS.gene85111.t1 | MTR_4g073250 | 27.027 | 185 | 112 | 5 | 10 | 176 | 6 | 185 | 7.17e-13 | 64.7 |
| MS.gene85111.t1 | MTR_3g078260 | 28.866 | 194 | 112 | 7 | 1 | 176 | 1 | 186 | 1.43e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85111.t1 | AT1G52280 | 86.829 | 205 | 16 | 2 | 5 | 199 | 3 | 206 | 3.43e-131 | 367 |
| MS.gene85111.t1 | AT3G16100 | 84.878 | 205 | 20 | 2 | 5 | 199 | 3 | 206 | 1.46e-128 | 360 |
| MS.gene85111.t1 | AT3G18820 | 84.390 | 205 | 21 | 2 | 5 | 199 | 3 | 206 | 6.43e-124 | 348 |
| MS.gene85111.t1 | AT1G49300 | 81.463 | 205 | 27 | 2 | 5 | 199 | 3 | 206 | 5.45e-120 | 338 |
| MS.gene85111.t1 | AT1G49300 | 81.463 | 205 | 27 | 2 | 5 | 199 | 3 | 206 | 5.45e-120 | 338 |
| MS.gene85111.t1 | AT1G22740 | 69.417 | 206 | 47 | 4 | 5 | 199 | 3 | 203 | 2.69e-99 | 286 |
| MS.gene85111.t1 | AT4G09720 | 65.865 | 208 | 54 | 3 | 5 | 199 | 3 | 206 | 1.55e-97 | 281 |
| MS.gene85111.t1 | AT4G09720 | 62.557 | 219 | 54 | 4 | 5 | 199 | 3 | 217 | 7.37e-94 | 273 |
| MS.gene85111.t1 | AT4G09720 | 63.850 | 213 | 55 | 4 | 5 | 199 | 3 | 211 | 7.82e-94 | 273 |
| MS.gene85111.t1 | AT2G21880 | 67.222 | 180 | 49 | 1 | 6 | 175 | 5 | 184 | 9.72e-86 | 252 |
| MS.gene85111.t1 | AT4G09720 | 65.341 | 176 | 54 | 2 | 27 | 199 | 1 | 172 | 3.11e-82 | 242 |
| MS.gene85111.t1 | AT4G09720 | 65.341 | 176 | 54 | 2 | 27 | 199 | 1 | 172 | 3.11e-82 | 242 |
| MS.gene85111.t1 | AT4G09720 | 65.341 | 176 | 54 | 2 | 27 | 199 | 1 | 172 | 3.11e-82 | 242 |
| MS.gene85111.t1 | AT2G21880 | 62.778 | 180 | 49 | 2 | 6 | 175 | 5 | 176 | 5.05e-76 | 227 |
| MS.gene85111.t1 | AT2G21880 | 65.409 | 159 | 45 | 1 | 27 | 175 | 1 | 159 | 2.21e-72 | 217 |
| MS.gene85111.t1 | AT2G21880 | 65.409 | 159 | 45 | 1 | 27 | 175 | 1 | 159 | 2.21e-72 | 217 |
| MS.gene85111.t1 | AT5G39620 | 56.977 | 172 | 64 | 1 | 11 | 172 | 6 | 177 | 7.14e-67 | 204 |
| MS.gene85111.t1 | AT1G09630 | 40.606 | 165 | 81 | 4 | 10 | 164 | 12 | 169 | 1.65e-35 | 124 |
| MS.gene85111.t1 | AT1G28550 | 37.374 | 198 | 97 | 6 | 10 | 187 | 13 | 203 | 1.67e-35 | 124 |
| MS.gene85111.t1 | AT4G17530 | 38.308 | 201 | 103 | 6 | 10 | 197 | 8 | 200 | 1.94e-35 | 124 |
| MS.gene85111.t1 | AT5G47200 | 38.308 | 201 | 103 | 6 | 10 | 197 | 8 | 200 | 2.43e-35 | 123 |
| MS.gene85111.t1 | AT1G02130 | 35.821 | 201 | 109 | 5 | 10 | 197 | 8 | 201 | 4.48e-34 | 120 |
| MS.gene85111.t1 | AT2G33870 | 36.548 | 197 | 98 | 6 | 10 | 186 | 13 | 202 | 5.94e-34 | 120 |
| MS.gene85111.t1 | AT5G59840 | 36.408 | 206 | 107 | 6 | 10 | 197 | 15 | 214 | 9.45e-34 | 120 |
| MS.gene85111.t1 | AT2G44610 | 36.098 | 205 | 107 | 4 | 12 | 199 | 11 | 208 | 9.84e-34 | 119 |
| MS.gene85111.t1 | AT5G60860 | 40.741 | 162 | 79 | 4 | 10 | 161 | 13 | 167 | 1.15e-33 | 119 |
| MS.gene85111.t1 | AT3G53610 | 36.098 | 205 | 110 | 7 | 10 | 199 | 15 | 213 | 2.09e-33 | 119 |
| MS.gene85111.t1 | AT3G53610 | 36.098 | 205 | 110 | 7 | 10 | 199 | 15 | 213 | 2.09e-33 | 119 |
| MS.gene85111.t1 | AT3G53610 | 36.098 | 205 | 110 | 7 | 10 | 199 | 15 | 213 | 2.09e-33 | 119 |
| MS.gene85111.t1 | AT3G15060 | 39.877 | 163 | 81 | 4 | 9 | 161 | 12 | 167 | 2.10e-33 | 119 |
| MS.gene85111.t1 | AT5G45750 | 34.928 | 209 | 107 | 7 | 10 | 197 | 13 | 213 | 8.10e-33 | 117 |
| MS.gene85111.t1 | AT3G46060 | 35.922 | 206 | 108 | 6 | 10 | 197 | 15 | 214 | 1.05e-32 | 117 |
| MS.gene85111.t1 | AT3G46060 | 35.922 | 206 | 108 | 6 | 10 | 197 | 15 | 214 | 1.05e-32 | 117 |
| MS.gene85111.t1 | AT3G46060 | 35.922 | 206 | 108 | 6 | 10 | 197 | 15 | 214 | 1.05e-32 | 117 |
| MS.gene85111.t1 | AT5G59150 | 36.970 | 165 | 87 | 4 | 10 | 164 | 12 | 169 | 2.05e-32 | 116 |
| MS.gene85111.t1 | AT3G11730 | 36.139 | 202 | 108 | 5 | 10 | 197 | 8 | 202 | 3.13e-32 | 115 |
| MS.gene85111.t1 | AT1G05810 | 35.165 | 182 | 101 | 4 | 6 | 177 | 8 | 182 | 3.40e-32 | 116 |
| MS.gene85111.t1 | AT1G07410 | 36.970 | 165 | 87 | 4 | 10 | 164 | 12 | 169 | 4.62e-32 | 115 |
| MS.gene85111.t1 | AT3G46830 | 37.576 | 165 | 86 | 4 | 10 | 164 | 12 | 169 | 5.98e-32 | 115 |
| MS.gene85111.t1 | AT3G46830 | 37.576 | 165 | 86 | 4 | 10 | 164 | 12 | 169 | 5.98e-32 | 115 |
| MS.gene85111.t1 | AT1G05810 | 35.165 | 182 | 101 | 4 | 6 | 177 | 54 | 228 | 7.81e-32 | 116 |
| MS.gene85111.t1 | AT5G03520 | 40.476 | 168 | 84 | 4 | 10 | 167 | 15 | 176 | 8.76e-32 | 115 |
| MS.gene85111.t1 | AT2G31680 | 34.831 | 178 | 99 | 4 | 10 | 177 | 12 | 182 | 1.18e-31 | 114 |
| MS.gene85111.t1 | AT5G64990 | 37.619 | 210 | 97 | 7 | 12 | 199 | 9 | 206 | 4.49e-31 | 112 |
| MS.gene85111.t1 | AT4G18430 | 32.381 | 210 | 112 | 8 | 10 | 197 | 13 | 214 | 5.43e-31 | 112 |
| MS.gene85111.t1 | AT3G12160 | 38.788 | 165 | 84 | 4 | 10 | 164 | 15 | 172 | 7.45e-31 | 112 |
| MS.gene85111.t1 | AT3G09900 | 41.071 | 168 | 83 | 5 | 10 | 167 | 15 | 176 | 7.68e-31 | 112 |
| MS.gene85111.t1 | AT1G18200 | 39.506 | 162 | 81 | 4 | 10 | 161 | 13 | 167 | 9.01e-31 | 112 |
| MS.gene85111.t1 | AT2G43130 | 34.831 | 178 | 99 | 4 | 10 | 177 | 12 | 182 | 1.34e-30 | 112 |
| MS.gene85111.t1 | AT1G06400 | 38.095 | 168 | 86 | 5 | 10 | 166 | 13 | 173 | 2.32e-30 | 111 |
| MS.gene85111.t1 | AT5G45130 | 33.333 | 210 | 115 | 6 | 1 | 197 | 1 | 198 | 2.44e-30 | 110 |
| MS.gene85111.t1 | AT4G18800 | 38.095 | 168 | 86 | 5 | 10 | 166 | 13 | 173 | 2.46e-30 | 111 |
| MS.gene85111.t1 | AT5G47960 | 33.491 | 212 | 110 | 6 | 10 | 197 | 15 | 219 | 2.67e-30 | 111 |
| MS.gene85111.t1 | AT1G16920 | 38.095 | 168 | 86 | 6 | 10 | 166 | 13 | 173 | 4.86e-30 | 110 |
| MS.gene85111.t1 | AT5G10260 | 35.122 | 205 | 108 | 5 | 12 | 199 | 11 | 207 | 6.37e-30 | 109 |
| MS.gene85111.t1 | AT4G35860 | 37.209 | 172 | 91 | 4 | 10 | 171 | 6 | 170 | 1.34e-29 | 109 |
| MS.gene85111.t1 | AT4G39990 | 36.364 | 165 | 88 | 4 | 10 | 164 | 17 | 174 | 2.10e-29 | 108 |
| MS.gene85111.t1 | AT1G73640 | 38.272 | 162 | 83 | 4 | 10 | 161 | 13 | 167 | 2.19e-29 | 109 |
| MS.gene85111.t1 | AT4G19640 | 34.054 | 185 | 105 | 4 | 1 | 175 | 1 | 178 | 4.36e-29 | 107 |
| MS.gene85111.t1 | AT5G47520 | 35.928 | 167 | 90 | 4 | 10 | 166 | 14 | 173 | 6.06e-29 | 107 |
| MS.gene85111.t1 | AT3G07410 | 34.884 | 172 | 95 | 4 | 10 | 171 | 12 | 176 | 6.68e-29 | 107 |
| MS.gene85111.t1 | AT4G39890 | 37.805 | 164 | 86 | 3 | 11 | 164 | 10 | 167 | 8.30e-29 | 107 |
| MS.gene85111.t1 | AT5G64990 | 36.406 | 217 | 97 | 8 | 12 | 199 | 9 | 213 | 2.07e-28 | 106 |
| MS.gene85111.t1 | AT5G65270 | 34.545 | 165 | 91 | 4 | 10 | 164 | 17 | 174 | 2.16e-28 | 106 |
| MS.gene85111.t1 | AT4G17160 | 37.888 | 161 | 83 | 4 | 11 | 161 | 7 | 160 | 4.06e-28 | 105 |
| MS.gene85111.t1 | AT5G45130 | 33.503 | 197 | 106 | 6 | 14 | 197 | 22 | 206 | 1.20e-27 | 103 |
| MS.gene85111.t1 | AT2G22290 | 33.981 | 206 | 109 | 5 | 12 | 199 | 11 | 207 | 1.80e-27 | 103 |
| MS.gene85111.t1 | AT4G17170 | 37.037 | 162 | 85 | 4 | 10 | 161 | 6 | 160 | 2.07e-27 | 103 |
| MS.gene85111.t1 | AT1G43890 | 38.650 | 163 | 84 | 5 | 10 | 162 | 13 | 169 | 1.08e-26 | 101 |
| MS.gene85111.t1 | AT1G43890 | 38.650 | 163 | 84 | 5 | 10 | 162 | 13 | 169 | 1.08e-26 | 101 |
| MS.gene85111.t1 | AT1G43890 | 38.650 | 163 | 84 | 5 | 10 | 162 | 13 | 169 | 1.08e-26 | 101 |
| MS.gene85111.t1 | AT5G03530 | 36.082 | 194 | 90 | 7 | 11 | 176 | 14 | 201 | 2.52e-26 | 100 |
| MS.gene85111.t1 | AT5G03530 | 36.082 | 194 | 90 | 7 | 11 | 176 | 14 | 201 | 2.52e-26 | 100 |
| MS.gene85111.t1 | AT1G01200 | 35.185 | 162 | 89 | 3 | 10 | 161 | 28 | 183 | 9.08e-26 | 99.8 |
| MS.gene85111.t1 | AT3G54840 | 33.333 | 168 | 94 | 5 | 7 | 163 | 30 | 190 | 2.16e-25 | 97.8 |
| MS.gene85111.t1 | AT3G54840 | 32.584 | 178 | 102 | 5 | 7 | 173 | 30 | 200 | 3.75e-25 | 97.4 |
| MS.gene85111.t1 | AT5G03520 | 41.667 | 132 | 71 | 3 | 36 | 167 | 41 | 166 | 5.54e-25 | 97.1 |
| MS.gene85111.t1 | AT3G54840 | 33.140 | 172 | 97 | 5 | 13 | 173 | 2 | 166 | 2.22e-24 | 94.4 |
| MS.gene85111.t1 | AT4G19640 | 35.135 | 148 | 81 | 3 | 1 | 138 | 1 | 143 | 3.77e-24 | 93.2 |
| MS.gene85111.t1 | AT4G19640 | 36.641 | 131 | 69 | 2 | 1 | 121 | 1 | 127 | 8.68e-23 | 90.9 |
| MS.gene85111.t1 | AT5G59150 | 37.398 | 123 | 70 | 3 | 42 | 164 | 3 | 118 | 6.98e-22 | 87.8 |
| MS.gene85111.t1 | AT3G09910 | 35.088 | 171 | 95 | 5 | 11 | 171 | 14 | 178 | 1.23e-21 | 88.2 |
| MS.gene85111.t1 | AT3G09910 | 35.088 | 171 | 95 | 5 | 11 | 171 | 14 | 178 | 1.23e-21 | 88.2 |
| MS.gene85111.t1 | AT3G09910 | 35.802 | 162 | 88 | 5 | 11 | 162 | 14 | 169 | 1.99e-21 | 87.8 |
| MS.gene85111.t1 | AT3G09910 | 35.802 | 162 | 88 | 5 | 11 | 162 | 14 | 169 | 1.99e-21 | 87.8 |
| MS.gene85111.t1 | AT3G09910 | 35.802 | 162 | 88 | 5 | 11 | 162 | 14 | 169 | 1.99e-21 | 87.8 |
| MS.gene85111.t1 | AT4G35860 | 36.923 | 130 | 75 | 3 | 42 | 171 | 2 | 124 | 5.48e-21 | 85.5 |
| MS.gene85111.t1 | AT5G55190 | 31.325 | 166 | 84 | 6 | 11 | 161 | 14 | 164 | 1.50e-17 | 77.8 |
| MS.gene85111.t1 | AT5G20020 | 31.325 | 166 | 84 | 6 | 11 | 161 | 14 | 164 | 1.64e-17 | 77.8 |
| MS.gene85111.t1 | AT5G20010 | 31.325 | 166 | 84 | 6 | 11 | 161 | 14 | 164 | 1.84e-17 | 77.8 |
| MS.gene85111.t1 | AT5G55080 | 29.193 | 161 | 94 | 4 | 11 | 161 | 14 | 164 | 2.16e-17 | 77.4 |
| MS.gene85111.t1 | AT4G28950 | 29.268 | 205 | 116 | 7 | 10 | 198 | 6 | 197 | 8.00e-17 | 75.5 |
| MS.gene85111.t1 | AT5G45970 | 28.492 | 179 | 105 | 6 | 10 | 170 | 6 | 179 | 3.37e-14 | 68.6 |
| MS.gene85111.t1 | AT4G35020 | 28.492 | 179 | 105 | 5 | 10 | 170 | 6 | 179 | 5.56e-13 | 65.1 |
| MS.gene85111.t1 | AT4G35020 | 28.492 | 179 | 105 | 5 | 10 | 170 | 6 | 179 | 5.56e-13 | 65.1 |
| MS.gene85111.t1 | AT4G35020 | 28.492 | 179 | 105 | 5 | 10 | 170 | 6 | 179 | 5.56e-13 | 65.1 |
| MS.gene85111.t1 | AT1G20090 | 28.090 | 178 | 105 | 6 | 10 | 169 | 5 | 177 | 6.44e-13 | 65.1 |
| MS.gene85111.t1 | AT5G62880 | 29.787 | 188 | 107 | 6 | 1 | 170 | 1 | 181 | 6.74e-13 | 65.1 |
| MS.gene85111.t1 | AT2G44690 | 28.655 | 171 | 99 | 6 | 10 | 162 | 18 | 183 | 7.35e-13 | 65.1 |
| MS.gene85111.t1 | AT3G48040 | 29.787 | 188 | 107 | 6 | 1 | 170 | 1 | 181 | 9.06e-13 | 64.7 |
| MS.gene85111.t1 | AT1G75840 | 28.090 | 178 | 105 | 6 | 10 | 169 | 6 | 178 | 1.27e-12 | 63.9 |
| MS.gene85111.t1 | AT3G51300 | 28.652 | 178 | 104 | 6 | 10 | 169 | 6 | 178 | 1.57e-12 | 63.9 |
| MS.gene85111.t1 | AT5G09910 | 24.855 | 173 | 91 | 5 | 11 | 146 | 23 | 193 | 5.70e-12 | 63.9 |
| MS.gene85111.t1 | AT5G09910 | 24.855 | 173 | 91 | 5 | 11 | 146 | 23 | 193 | 5.70e-12 | 63.9 |
| MS.gene85111.t1 | AT2G17800 | 28.090 | 178 | 105 | 6 | 10 | 169 | 6 | 178 | 9.60e-12 | 61.6 |
| MS.gene85111.t1 | AT2G17800 | 28.090 | 178 | 105 | 6 | 10 | 169 | 6 | 178 | 9.60e-12 | 61.6 |
| MS.gene85111.t1 | AT4G35950 | 28.090 | 178 | 105 | 6 | 10 | 169 | 6 | 178 | 1.21e-11 | 61.6 |
| MS.gene85111.t1 | AT5G64813 | 24.873 | 197 | 102 | 6 | 11 | 163 | 23 | 217 | 2.12e-11 | 62.4 |
| MS.gene85111.t1 | AT5G64813 | 24.873 | 197 | 102 | 6 | 11 | 163 | 23 | 217 | 2.12e-11 | 62.4 |
| MS.gene85111.t1 | AT5G64813 | 24.873 | 197 | 102 | 6 | 11 | 163 | 23 | 217 | 2.12e-11 | 62.4 |
Find 52 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACCGACATCAATTGTTTC+TGG | 0.232108 | 2.4:-3027335 | None:intergenic |
| AAAACTCACAATTCTTCTTC+AGG | 0.319718 | 2.4:-3026979 | None:intergenic |
| GCGAGAAGAGTTCCTTATTC+AGG | 0.320875 | 2.4:+3026512 | MS.gene85111:CDS |
| TTGTTTCCCAACACCACAAA+TGG | 0.348208 | 2.4:-3026649 | None:intergenic |
| ACTCTTCTCGCCAGTGGTTA+AGG | 0.372983 | 2.4:-3026500 | None:intergenic |
| TCCTGAAAACTTCCCATTTG+TGG | 0.376974 | 2.4:+3026636 | MS.gene85111:CDS |
| AGACAGGTTGTTCACATTGC+AGG | 0.381648 | 2.4:+3025023 | MS.gene85111:CDS |
| TTTGCAGAGGTCTCAAAGTA+TGG | 0.397953 | 2.4:-3026895 | None:intergenic |
| AACTTCCCATTTGTGGTGTT+GGG | 0.400986 | 2.4:+3026643 | MS.gene85111:CDS |
| GTCTTCAACTTGAACTTCCT+TGG | 0.413731 | 2.4:-3025004 | None:intergenic |
| GTCATCATCCTCGGTGATAG+TGG | 0.414536 | 2.4:+3024748 | MS.gene85111:CDS |
| GGACGGCAACAGAGGTCAAC+AGG | 0.434788 | 2.4:+3027362 | MS.gene85111:CDS |
| ACAATTGATGTCGGTGGCGG+TGG | 0.446109 | 2.4:+3027341 | MS.gene85111:CDS |
| CAACTTGAACTTCCTTGGTA+AGG | 0.448202 | 2.4:-3024999 | None:intergenic |
| AAAGGCATGGTGTGCTTCCA+AGG | 0.464084 | 2.4:+3026864 | MS.gene85111:CDS |
| GATCTGGGATACTGCTGGTC+AGG | 0.467671 | 2.4:+3026386 | MS.gene85111:intron |
| CAGGAGAGGTTTCAAAGTCT+TGG | 0.475629 | 2.4:+3026405 | MS.gene85111:CDS |
| AAACTTCCCATTTGTGGTGT+TGG | 0.495054 | 2.4:+3026642 | MS.gene85111:CDS |
| GGAAACAAAGTAGATGTTGA+TGG | 0.512592 | 2.4:+3026664 | MS.gene85111:CDS |
| CTTTGAGACCTCTGCAAAGG+AGG | 0.516360 | 2.4:+3026900 | MS.gene85111:CDS |
| AAAGTATGGTATATTCCCCT+TGG | 0.522925 | 2.4:-3026881 | None:intergenic |
| AGGAAGTTCAAGTTGAAGAC+AGG | 0.529226 | 2.4:+3025007 | MS.gene85111:CDS |
| TGTTTCCCAACACCACAAAT+GGG | 0.537488 | 2.4:-3026648 | None:intergenic |
| TTGATGTCGGTGGCGGTGGA+CGG | 0.543988 | 2.4:+3027345 | MS.gene85111:CDS |
| GCGGCGAGAATGAGAAGCCA+TGG | 0.559756 | 2.4:-3024710 | None:intergenic |
| ATGCAGATCTGGGATACTGC+TGG | 0.566605 | 2.4:+3026381 | MS.gene85111:intron |
| GAAACAATTGATGTCGGTGG+CGG | 0.576334 | 2.4:+3027338 | MS.gene85111:CDS |
| GAGGTTTCAAAGTCTTGGTG+TGG | 0.576541 | 2.4:+3026410 | MS.gene85111:CDS |
| CTTGGTGTGGCTTTCTACCG+AGG | 0.578330 | 2.4:+3026423 | MS.gene85111:CDS |
| AATCAGTATAAGGCTACCAT+TGG | 0.580849 | 2.4:+3024967 | MS.gene85111:intron |
| TTTGAGACCTCTGCAAAGGA+GGG | 0.585589 | 2.4:+3026901 | MS.gene85111:CDS |
| AAGGCATGGTGTGCTTCCAA+GGG | 0.586547 | 2.4:+3026865 | MS.gene85111:CDS |
| GGTAAGGAAATCAGCACCAA+TGG | 0.599639 | 2.4:-3024983 | None:intergenic |
| AACAAAGTAGATGTTGATGG+TGG | 0.603728 | 2.4:+3026667 | MS.gene85111:CDS |
| GTGGCGGTGGACGGCAACAG+AGG | 0.605632 | 2.4:+3027354 | MS.gene85111:CDS |
| CTGAGAAGAAAGCAAAGGCA+TGG | 0.611252 | 2.4:+3026851 | MS.gene85111:CDS |
| TAAGGAACTCTTCTCGCCAG+TGG | 0.617763 | 2.4:-3026506 | None:intergenic |
| TCATCATCCTCGGTGATAGT+GGG | 0.618638 | 2.4:+3024749 | MS.gene85111:CDS |
| TTATTGAAAGTCATCATCCT+CGG | 0.622878 | 2.4:+3024739 | MS.gene85111:CDS |
| CCAGAAACAATTGATGTCGG+TGG | 0.629506 | 2.4:+3027335 | MS.gene85111:CDS |
| GGGATACTGCTGGTCAGGAG+AGG | 0.630015 | 2.4:+3026391 | MS.gene85111:CDS |
| TGGTGCTGATTTCCTTACCA+AGG | 0.632236 | 2.4:+3024987 | MS.gene85111:CDS |
| GGTTTCTGAGAAGAAAGCAA+AGG | 0.639361 | 2.4:+3026846 | MS.gene85111:intron |
| ATTAAAACCCTCCTTTGCAG+AGG | 0.646100 | 2.4:-3026908 | None:intergenic |
| ATACTTTGAGACCTCTGCAA+AGG | 0.653339 | 2.4:+3026897 | MS.gene85111:CDS |
| ATGCCAGAAACAATTGATGT+CGG | 0.654391 | 2.4:+3027332 | MS.gene85111:CDS |
| TGACATTTACATCATAAACA+AGG | 0.673979 | 2.4:-3026461 | None:intergenic |
| TGATGACTTTCAATAACATG+CGG | 0.690006 | 2.4:-3024732 | None:intergenic |
| GGACACAGCAATCTGCACCT+CGG | 0.707086 | 2.4:-3026440 | None:intergenic |
| AGGCATGGTGTGCTTCCAAG+GGG | 0.713588 | 2.4:+3026866 | MS.gene85111:CDS |
| TGACTTTCAATAACATGCGG+CGG | 0.715122 | 2.4:-3024729 | None:intergenic |
| TTATATACCCACTATCACCG+AGG | 0.799645 | 2.4:-3024756 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAATAAATAAATAATTGA+AGG | + | chr2.4:3026024-3026043 | MS.gene85111:intron | 10.0% |
| !! | AATTATGTATGTAATATGAA+AGG | + | chr2.4:3026264-3026283 | MS.gene85111:intron | 15.0% |
| !! | ATTATGTATGTAATATGAAA+GGG | + | chr2.4:3026265-3026284 | MS.gene85111:intron | 15.0% |
| !! | TTCATATTACATACATAATT+AGG | - | chr2.4:3026264-3026283 | None:intergenic | 15.0% |
| !! | AAAGTTTAGTAATCAGTATA+AGG | + | chr2.4:3024957-3024976 | MS.gene85111:intron | 20.0% |
| !! | CTACATGTTAAATGTTAATA+GGG | - | chr2.4:3025499-3025518 | None:intergenic | 20.0% |
| !! | TCAAAAAAAAAAAGTTGTGT+TGG | + | chr2.4:3027065-3027084 | MS.gene85111:intron | 20.0% |
| !! | TTAGAATATTAAAGATGGTA+GGG | + | chr2.4:3027094-3027113 | MS.gene85111:intron | 20.0% |
| !!! | ACCTAATTGATTTGATTTTT+AGG | + | chr2.4:3026600-3026619 | MS.gene85111:intron | 20.0% |
| !!! | AGGATTTAGAATATTAAAGA+TGG | + | chr2.4:3027089-3027108 | MS.gene85111:intron | 20.0% |
| !!! | ATATATTTTGACATTGAGAA+TGG | - | chr2.4:3025470-3025489 | None:intergenic | 20.0% |
| !!! | ATTACTATCAGCTTTTAAAT+AGG | - | chr2.4:3025585-3025604 | None:intergenic | 20.0% |
| !!! | GAATTCTGAAAAATAATTTG+AGG | - | chr2.4:3026721-3026740 | None:intergenic | 20.0% |
| !!! | TTATTTTTATTTGTTTGGCA+GGG | + | chr2.4:3024897-3024916 | MS.gene85111:intron | 20.0% |
| !!! | TTTAGAATATTAAAGATGGT+AGG | + | chr2.4:3027093-3027112 | MS.gene85111:intron | 20.0% |
| !!! | TTTATTTTTATTTGTTTGGC+AGG | + | chr2.4:3024896-3024915 | MS.gene85111:intron | 20.0% |
| ! | AAAGAGCAAAACTTCTTAAA+TGG | - | chr2.4:3027046-3027065 | None:intergenic | 25.0% |
| ! | AATTGAAAAGGAAAAGGAAA+AGG | - | chr2.4:3024801-3024820 | None:intergenic | 25.0% |
| ! | AGGATCAAACAAAATATCTA+TGG | - | chr2.4:3027290-3027309 | None:intergenic | 25.0% |
| ! | AGTTATACATTCATTCATAG+CGG | - | chr2.4:3027200-3027219 | None:intergenic | 25.0% |
| ! | AGTTGAAATTGAAAAGGAAA+AGG | - | chr2.4:3024807-3024826 | None:intergenic | 25.0% |
| ! | AGTTTATACCCAAAAAAACA+GGG | - | chr2.4:3025625-3025644 | None:intergenic | 25.0% |
| ! | ATCTTAACACAATTTCTGAA+GGG | + | chr2.4:3026561-3026580 | MS.gene85111:intron | 25.0% |
| ! | GAATAAAAATCACCTGAATA+AGG | - | chr2.4:3026527-3026546 | None:intergenic | 25.0% |
| ! | GAGATAAATAACTTACAACT+CGG | - | chr2.4:3026699-3026718 | None:intergenic | 25.0% |
| ! | GATCCATTTAATCAATACAA+TGG | - | chr2.4:3026235-3026254 | None:intergenic | 25.0% |
| ! | GCCTAAAAATCAAATCAATT+AGG | - | chr2.4:3026604-3026623 | None:intergenic | 25.0% |
| ! | GCTACATGTTAAATGTTAAT+AGG | - | chr2.4:3025500-3025519 | None:intergenic | 25.0% |
| ! | TAGAATATTAAAGATGGTAG+GGG | + | chr2.4:3027095-3027114 | MS.gene85111:intron | 25.0% |
| ! | TAGTTTATACCCAAAAAAAC+AGG | - | chr2.4:3025626-3025645 | None:intergenic | 25.0% |
| ! | TCCTAAAACATGTCATATAT+TGG | - | chr2.4:3025079-3025098 | None:intergenic | 25.0% |
| ! | TGACATTTACATCATAAACA+AGG | - | chr2.4:3026464-3026483 | None:intergenic | 25.0% |
| ! | TGATATTCTGACATCAATTT+GGG | - | chr2.4:3025537-3025556 | None:intergenic | 25.0% |
| ! | TGTGATAGTTGAAATTGAAA+AGG | - | chr2.4:3024813-3024832 | None:intergenic | 25.0% |
| ! | TTCAACTATCACATGTTAAA+GGG | + | chr2.4:3024820-3024839 | MS.gene85111:intron | 25.0% |
| ! | TTTCAACTATCACATGTTAA+AGG | + | chr2.4:3024819-3024838 | MS.gene85111:intron | 25.0% |
| !! | AAAAAAAAAGTTGTGTTGGT+AGG | + | chr2.4:3027069-3027088 | MS.gene85111:intron | 25.0% |
| !! | AAATTCATGTTTCTTTTTCC+TGG | + | chr2.4:3026177-3026196 | MS.gene85111:intron | 25.0% |
| !! | AATTAATGTTCGATTCGATT+CGG | + | chr2.4:3024864-3024883 | MS.gene85111:intron | 25.0% |
| !! | CTTTTGTCTAAGAAAGATAA+AGG | - | chr2.4:3025834-3025853 | None:intergenic | 25.0% |
| !! | TATCAAAAAACAAAGTGTCA+TGG | - | chr2.4:3026083-3026102 | None:intergenic | 25.0% |
| !! | TCCAATATATGACATGTTTT+AGG | + | chr2.4:3025075-3025094 | MS.gene85111:intron | 25.0% |
| !! | TTCAGGTGATTTTTATTCTT+TGG | + | chr2.4:3026529-3026548 | MS.gene85111:intron | 25.0% |
| !!! | AGACCATTGTATTGATTAAA+TGG | + | chr2.4:3026229-3026248 | MS.gene85111:intron | 25.0% |
| !!! | ATAGATATTTTGTTTGATCC+TGG | + | chr2.4:3027289-3027308 | MS.gene85111:intron | 25.0% |
| !!! | GTATAACTTGCTATTTCAAT+TGG | + | chr2.4:3027212-3027231 | MS.gene85111:intron | 25.0% |
| AAAACTCACAATTCTTCTTC+AGG | - | chr2.4:3026982-3027001 | None:intergenic | 30.0% | |
| AACAAGGTTTAAGAAGCTAT+TGG | + | chr2.4:3025931-3025950 | MS.gene85111:intron | 30.0% | |
| ACAAGGTTTAAGAAGCTATT+GGG | + | chr2.4:3025932-3025951 | MS.gene85111:intron | 30.0% | |
| ACACTGTCGTAAATTGTAAT+CGG | - | chr2.4:3025387-3025406 | None:intergenic | 30.0% | |
| AGAATATTAAAGATGGTAGG+GGG | + | chr2.4:3027096-3027115 | MS.gene85111:intron | 30.0% | |
| AGATTCTTGAGCAATATGTT+TGG | - | chr2.4:3026000-3026019 | None:intergenic | 30.0% | |
| AGTCTATCAACTACATATGA+TGG | - | chr2.4:3026743-3026762 | None:intergenic | 30.0% | |
| ATATGCCTAGATATGTATCT+AGG | - | chr2.4:3026056-3026075 | None:intergenic | 30.0% | |
| CAATATTAAGTGTATGACCT+TGG | - | chr2.4:3025194-3025213 | None:intergenic | 30.0% | |
| CATGTCATATATTGGAAACA+CGG | - | chr2.4:3025071-3025090 | None:intergenic | 30.0% | |
| CTTAGACAAAAGTCAAATGT+TGG | + | chr2.4:3025842-3025861 | MS.gene85111:intron | 30.0% | |
| GACAAATGTTAGTAAGTTAG+CGG | + | chr2.4:3025139-3025158 | MS.gene85111:intron | 30.0% | |
| GAGAATGGAAAAAAGAAGTA+TGG | - | chr2.4:3025455-3025474 | None:intergenic | 30.0% | |
| GATATCTCTTCAATGTGATT+TGG | - | chr2.4:3025977-3025996 | None:intergenic | 30.0% | |
| GATCTTAACACAATTTCTGA+AGG | + | chr2.4:3026560-3026579 | MS.gene85111:intron | 30.0% | |
| GATTCTTGAGCAATATGTTT+GGG | - | chr2.4:3025999-3026018 | None:intergenic | 30.0% | |
| GTGATATTCTGACATCAATT+TGG | - | chr2.4:3025538-3025557 | None:intergenic | 30.0% | |
| TACTTCCTAGATACATATCT+AGG | + | chr2.4:3026048-3026067 | MS.gene85111:intron | 30.0% | |
| TCACTACATGATGAAAAACA+AGG | + | chr2.4:3025915-3025934 | MS.gene85111:intron | 30.0% | |
| TGATGACTTTCAATAACATG+CGG | - | chr2.4:3024735-3024754 | None:intergenic | 30.0% | |
| TTATTGAAAGTCATCATCCT+CGG | + | chr2.4:3024739-3024758 | MS.gene85111:CDS | 30.0% | |
| ! | AATTTAATCCTGTGCACTTT+TGG | + | chr2.4:3025875-3025894 | MS.gene85111:intron | 30.0% |
| ! | TATCAGCTTTTAAATAGGAC+TGG | - | chr2.4:3025580-3025599 | None:intergenic | 30.0% |
| !! | ACAAAAGCATCTTCTAACTT+TGG | + | chr2.4:3025702-3025721 | MS.gene85111:intron | 30.0% |
| !!! | GTTTTAGGATCTATAAAGCT+CGG | + | chr2.4:3025090-3025109 | MS.gene85111:intron | 30.0% |
| !!! | TTCATCTACCCTGTTTTTTT+GGG | + | chr2.4:3025614-3025633 | MS.gene85111:intron | 30.0% |
| !!! | TTCATTCTTGAGAGCATTTT+TGG | - | chr2.4:3026959-3026978 | None:intergenic | 30.0% |
| !!! | TTTCATCTACCCTGTTTTTT+TGG | + | chr2.4:3025613-3025632 | MS.gene85111:intron | 30.0% |
| AAAGGAAAAGGAAAAGGAGA+AGG | - | chr2.4:3024795-3024814 | None:intergenic | 35.0% | |
| AAAGTATGGTATATTCCCCT+TGG | - | chr2.4:3026884-3026903 | None:intergenic | 35.0% | |
| AATCAGTATAAGGCTACCAT+TGG | + | chr2.4:3024967-3024986 | MS.gene85111:intron | 35.0% | |
| ATCTGTCATAATCAACAACC+AGG | - | chr2.4:3027310-3027329 | None:intergenic | 35.0% | |
| ATGCCAGAAACAATTGATGT+CGG | + | chr2.4:3027332-3027351 | MS.gene85111:CDS | 35.0% | |
| ATGTAGTGAGAGGAACAAAA+TGG | - | chr2.4:3025904-3025923 | None:intergenic | 35.0% | |
| ATTAAGTGTATGACCTTGGT+AGG | - | chr2.4:3025190-3025209 | None:intergenic | 35.0% | |
| GAGACAAGAATGTCAAACAT+TGG | - | chr2.4:3025798-3025817 | None:intergenic | 35.0% | |
| GGAAACAAAGTAGATGTTGA+TGG | + | chr2.4:3026664-3026683 | MS.gene85111:CDS | 35.0% | |
| GTAATCGGCATCAACTAATT+CGG | - | chr2.4:3025372-3025391 | None:intergenic | 35.0% | |
| GTACTTGAGATATGATGACA+TGG | + | chr2.4:3026147-3026166 | MS.gene85111:intron | 35.0% | |
| TCTGATTTACCATATGCTCA+CGG | + | chr2.4:3026781-3026800 | MS.gene85111:intron | 35.0% | |
| TGAGATATGATGACATGGTT+GGG | + | chr2.4:3026152-3026171 | MS.gene85111:intron | 35.0% | |
| TTGAGATATGATGACATGGT+TGG | + | chr2.4:3026151-3026170 | MS.gene85111:intron | 35.0% | |
| TTTATGCGCATTGTTAACTG+TGG | + | chr2.4:3027019-3027038 | MS.gene85111:intron | 35.0% | |
| ! | AACAAAGTAGATGTTGATGG+TGG | + | chr2.4:3026667-3026686 | MS.gene85111:CDS | 35.0% |
| ! | GTTTCAAGTGATTCTCTTTG+AGG | + | chr2.4:3027246-3027265 | MS.gene85111:intron | 35.0% |
| ! | GTTTTTCATCATGTAGTGAG+AGG | - | chr2.4:3025914-3025933 | None:intergenic | 35.0% |
| ! | TTAACACAATTTCTGAAGGG+CGG | + | chr2.4:3026564-3026583 | MS.gene85111:intron | 35.0% |
| ! | TTTAAATAGGACTGGTGAAG+TGG | - | chr2.4:3025572-3025591 | None:intergenic | 35.0% |
| ! | TTTTGTGACTAGTGTGAACA+AGG | - | chr2.4:3025688-3025707 | None:intergenic | 35.0% |
| !! | AAAGGAGGGTTTTAATGTTG+AGG | + | chr2.4:3026915-3026934 | MS.gene85111:CDS | 35.0% |
| !! | CTTTTGAAAACCTTAACCAC+TGG | + | chr2.4:3026490-3026509 | MS.gene85111:CDS | 35.0% |
| !! | TTTTATTTGTTTGGCAGGGT+TGG | + | chr2.4:3024901-3024920 | MS.gene85111:intron | 35.0% |
| !!! | AAGCATCGATCTTTTTATCC+AGG | - | chr2.4:3026198-3026217 | None:intergenic | 35.0% |
| AAACTTCCCATTTGTGGTGT+TGG | + | chr2.4:3026642-3026661 | MS.gene85111:CDS | 40.0% | |
| AACTTCCCATTTGTGGTGTT+GGG | + | chr2.4:3026643-3026662 | MS.gene85111:CDS | 40.0% | |
| AGACTTTCTTCCTCTTGAGA+GGG | + | chr2.4:3026758-3026777 | MS.gene85111:intron | 40.0% | |
| AGTCTGTGCTTCTTTCGTTA+CGG | - | chr2.4:3025418-3025437 | None:intergenic | 40.0% | |
| ATTAAAACCCTCCTTTGCAG+AGG | - | chr2.4:3026911-3026930 | None:intergenic | 40.0% | |
| CAACTTGAACTTCCTTGGTA+AGG | - | chr2.4:3025002-3025021 | None:intergenic | 40.0% | |
| CTGATTTACCATATGCTCAC+GGG | + | chr2.4:3026782-3026801 | MS.gene85111:intron | 40.0% | |
| GTCTTCAACTTGAACTTCCT+TGG | - | chr2.4:3025007-3025026 | None:intergenic | 40.0% | |
| TAGACTTTCTTCCTCTTGAG+AGG | + | chr2.4:3026757-3026776 | MS.gene85111:intron | 40.0% | |
| TCCTGAAAACTTCCCATTTG+TGG | + | chr2.4:3026636-3026655 | MS.gene85111:CDS | 40.0% | |
| TCGACGAGACAACACATATA+CGG | + | chr2.4:3025218-3025237 | MS.gene85111:intron | 40.0% | |
| TGACTTTCAATAACATGCGG+CGG | - | chr2.4:3024732-3024751 | None:intergenic | 40.0% | |
| TGATTTACCATATGCTCACG+GGG | + | chr2.4:3026783-3026802 | MS.gene85111:intron | 40.0% | |
| TGTTTCCCAACACCACAAAT+GGG | - | chr2.4:3026651-3026670 | None:intergenic | 40.0% | |
| TTACATGACCCACTTGAAGA+TGG | - | chr2.4:3025768-3025787 | None:intergenic | 40.0% | |
| TTATATACCCACTATCACCG+AGG | - | chr2.4:3024759-3024778 | None:intergenic | 40.0% | |
| TTGTTTCCCAACACCACAAA+TGG | - | chr2.4:3026652-3026671 | None:intergenic | 40.0% | |
| TTTGCAGAGGTCTCAAAGTA+TGG | - | chr2.4:3026898-3026917 | None:intergenic | 40.0% | |
| ! | AATGGATTCCAAAAGTGCAC+AGG | - | chr2.4:3025886-3025905 | None:intergenic | 40.0% |
| ! | ACCACAAATGGGAAGTTTTC+AGG | - | chr2.4:3026640-3026659 | None:intergenic | 40.0% |
| ! | GAAGCTATTGGGCATGTTTT+TGG | + | chr2.4:3025943-3025962 | MS.gene85111:intron | 40.0% |
| ! | GCATTTGTTGCTTCTGTTTC+AGG | + | chr2.4:3026825-3026844 | MS.gene85111:intron | 40.0% |
| ! | GGTTTCTGAGAAGAAAGCAA+AGG | + | chr2.4:3026846-3026865 | MS.gene85111:intron | 40.0% |
| ! | TCAAGTGATTCTCTTTGAGG+AGG | + | chr2.4:3027249-3027268 | MS.gene85111:intron | 40.0% |
| !! | AGGAAGTTCAAGTTGAAGAC+AGG | + | chr2.4:3025007-3025026 | MS.gene85111:CDS | 40.0% |
| !! | ATACTTTGAGACCTCTGCAA+AGG | + | chr2.4:3026897-3026916 | MS.gene85111:CDS | 40.0% |
| ACCAATTGAGCTTCCTACCA+AGG | + | chr2.4:3025174-3025193 | MS.gene85111:intron | 45.0% | |
| ACCTTGGTAGGAAGCTCAAT+TGG | - | chr2.4:3025178-3025197 | None:intergenic | 45.0% | |
| AGACAGGTTGTTCACATTGC+AGG | + | chr2.4:3025023-3025042 | MS.gene85111:CDS | 45.0% | |
| AGTTCACCACCATCTTCAAG+TGG | + | chr2.4:3025756-3025775 | MS.gene85111:intron | 45.0% | |
| ATTTACCATATGCTCACGGG+GGG | + | chr2.4:3026785-3026804 | MS.gene85111:intron | 45.0% | |
| CAGGAGAGGTTTCAAAGTCT+TGG | + | chr2.4:3026405-3026424 | MS.gene85111:CDS | 45.0% | |
| CCACCGACATCAATTGTTTC+TGG | - | chr2.4:3027338-3027357 | None:intergenic | 45.0% | |
| CCAGAAACAATTGATGTCGG+TGG | + | chr2.4:3027335-3027354 | MS.gene85111:CDS | 45.0% | |
| CGACGAGACAACACATATAC+GGG | + | chr2.4:3025219-3025238 | MS.gene85111:intron | 45.0% | |
| CGTTGTGTACATGCAGATCT+GGG | + | chr2.4:3026371-3026390 | MS.gene85111:intron | 45.0% | |
| CTGAGAAGAAAGCAAAGGCA+TGG | + | chr2.4:3026851-3026870 | MS.gene85111:CDS | 45.0% | |
| GAAACAATTGATGTCGGTGG+CGG | + | chr2.4:3027338-3027357 | MS.gene85111:CDS | 45.0% | |
| GAGGTTTCAAAGTCTTGGTG+TGG | + | chr2.4:3026410-3026429 | MS.gene85111:CDS | 45.0% | |
| GATTTACCATATGCTCACGG+GGG | + | chr2.4:3026784-3026803 | MS.gene85111:intron | 45.0% | |
| GCGAGAAGAGTTCCTTATTC+AGG | + | chr2.4:3026512-3026531 | MS.gene85111:CDS | 45.0% | |
| GGTAAGGAAATCAGCACCAA+TGG | - | chr2.4:3024986-3025005 | None:intergenic | 45.0% | |
| GTAAATCAGACCCTCTCAAG+AGG | - | chr2.4:3026771-3026790 | None:intergenic | 45.0% | |
| GTCTGTGCTTCTTTCGTTAC+GGG | - | chr2.4:3025417-3025436 | None:intergenic | 45.0% | |
| GTTCACCACCATCTTCAAGT+GGG | + | chr2.4:3025757-3025776 | MS.gene85111:intron | 45.0% | |
| TCATCATCCTCGGTGATAGT+GGG | + | chr2.4:3024749-3024768 | MS.gene85111:CDS | 45.0% | |
| TCGTTGTGTACATGCAGATC+TGG | + | chr2.4:3026370-3026389 | MS.gene85111:intron | 45.0% | |
| ! | GTGATTCTCTTTGAGGAGGA+TGG | + | chr2.4:3027253-3027272 | MS.gene85111:intron | 45.0% |
| ! | TGGTGGTGAACTTCATGAAC+AGG | - | chr2.4:3025748-3025767 | None:intergenic | 45.0% |
| ! | TTCTCTTTGAGGAGGATGGT+TGG | + | chr2.4:3027257-3027276 | MS.gene85111:intron | 45.0% |
| ! | TTTGAGACCTCTGCAAAGGA+GGG | + | chr2.4:3026901-3026920 | MS.gene85111:CDS | 45.0% |
| !! | GGGAAGTTTTCAGGATCAGA+TGG | - | chr2.4:3026631-3026650 | None:intergenic | 45.0% |
| !! | TGGTGCTGATTTCCTTACCA+AGG | + | chr2.4:3024987-3025006 | MS.gene85111:CDS | 45.0% |
| !!! | TTTTTTTATTTTTATTTGTT+TGG | + | chr2.4:3024892-3024911 | MS.gene85111:intron | 5.0% |
| AAGGCATGGTGTGCTTCCAA+GGG | + | chr2.4:3026865-3026884 | MS.gene85111:CDS | 50.0% | |
| ACTCTTCTCGCCAGTGGTTA+AGG | - | chr2.4:3026503-3026522 | None:intergenic | 50.0% | |
| CATGACCCACTTGAAGATGG+TGG | - | chr2.4:3025765-3025784 | None:intergenic | 50.0% | |
| GTCATCATCCTCGGTGATAG+TGG | + | chr2.4:3024748-3024767 | MS.gene85111:CDS | 50.0% | |
| TAAGGAACTCTTCTCGCCAG+TGG | - | chr2.4:3026509-3026528 | None:intergenic | 50.0% | |
| TTTACCATATGCTCACGGGG+GGG | + | chr2.4:3026786-3026805 | MS.gene85111:intron | 50.0% | |
| ! | AAAGGCATGGTGTGCTTCCA+AGG | + | chr2.4:3026864-3026883 | MS.gene85111:CDS | 50.0% |
| ! | ATGCAGATCTGGGATACTGC+TGG | + | chr2.4:3026381-3026400 | MS.gene85111:intron | 50.0% |
| ! | TAGGACTGGTGAAGTGGTGA+TGG | - | chr2.4:3025566-3025585 | None:intergenic | 50.0% |
| !! | CTTTGAGACCTCTGCAAAGG+AGG | + | chr2.4:3026900-3026919 | MS.gene85111:CDS | 50.0% |
| AGGCATGGTGTGCTTCCAAG+GGG | + | chr2.4:3026866-3026885 | MS.gene85111:CDS | 55.0% | |
| GGACACAGCAATCTGCACCT+CGG | - | chr2.4:3026443-3026462 | None:intergenic | 55.0% | |
| TTAACCCCCCCGTGAGCATA+TGG | - | chr2.4:3026793-3026812 | None:intergenic | 55.0% | |
| ! | ACAATTGATGTCGGTGGCGG+TGG | + | chr2.4:3027341-3027360 | MS.gene85111:CDS | 55.0% |
| ! | CTTGGTGTGGCTTTCTACCG+AGG | + | chr2.4:3026423-3026442 | MS.gene85111:CDS | 55.0% |
| ! | GATCTGGGATACTGCTGGTC+AGG | + | chr2.4:3026386-3026405 | MS.gene85111:intron | 55.0% |
| GGACGGCAACAGAGGTCAAC+AGG | + | chr2.4:3027362-3027381 | MS.gene85111:CDS | 60.0% | |
| GGGATACTGCTGGTCAGGAG+AGG | + | chr2.4:3026391-3026410 | MS.gene85111:CDS | 60.0% | |
| ! | TTGATGTCGGTGGCGGTGGA+CGG | + | chr2.4:3027345-3027364 | MS.gene85111:CDS | 60.0% |
| GTGGCGGTGGACGGCAACAG+AGG | + | chr2.4:3027354-3027373 | MS.gene85111:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 3024712 | 3027397 | 3024712 | ID=MS.gene85111 |
| chr2.4 | mRNA | 3024712 | 3027397 | 3024712 | ID=MS.gene85111.t1;Parent=MS.gene85111 |
| chr2.4 | exon | 3024712 | 3024770 | 3024712 | ID=MS.gene85111.t1.exon1;Parent=MS.gene85111.t1 |
| chr2.4 | CDS | 3024712 | 3024770 | 3024712 | ID=cds.MS.gene85111.t1;Parent=MS.gene85111.t1 |
| chr2.4 | exon | 3024918 | 3024948 | 3024918 | ID=MS.gene85111.t1.exon2;Parent=MS.gene85111.t1 |
| chr2.4 | CDS | 3024918 | 3024948 | 3024918 | ID=cds.MS.gene85111.t1;Parent=MS.gene85111.t1 |
| chr2.4 | exon | 3024979 | 3025044 | 3024979 | ID=MS.gene85111.t1.exon3;Parent=MS.gene85111.t1 |
| chr2.4 | CDS | 3024979 | 3025044 | 3024979 | ID=cds.MS.gene85111.t1;Parent=MS.gene85111.t1 |
| chr2.4 | exon | 3026387 | 3026533 | 3026387 | ID=MS.gene85111.t1.exon4;Parent=MS.gene85111.t1 |
| chr2.4 | CDS | 3026387 | 3026533 | 3026387 | ID=cds.MS.gene85111.t1;Parent=MS.gene85111.t1 |
| chr2.4 | exon | 3026622 | 3026702 | 3026622 | ID=MS.gene85111.t1.exon5;Parent=MS.gene85111.t1 |
| chr2.4 | CDS | 3026622 | 3026702 | 3026622 | ID=cds.MS.gene85111.t1;Parent=MS.gene85111.t1 |
| chr2.4 | exon | 3026847 | 3026992 | 3026847 | ID=MS.gene85111.t1.exon6;Parent=MS.gene85111.t1 |
| chr2.4 | CDS | 3026847 | 3026992 | 3026847 | ID=cds.MS.gene85111.t1;Parent=MS.gene85111.t1 |
| chr2.4 | exon | 3027328 | 3027397 | 3027328 | ID=MS.gene85111.t1.exon7;Parent=MS.gene85111.t1 |
| chr2.4 | CDS | 3027328 | 3027397 | 3027328 | ID=cds.MS.gene85111.t1;Parent=MS.gene85111.t1 |
| Gene Sequence |
| Protein sequence |
