Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88184.t1 | XP_013455783.2 | 97 | 271 | 8 | 0 | 1 | 271 | 1 | 271 | 3.30E-143 | 517.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88184.t1 | Q94KL7 | 56.5 | 271 | 114 | 1 | 2 | 268 | 3 | 273 | 7.5e-80 | 298.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88184.t1 | A0A396I496 | 97.0 | 271 | 8 | 0 | 1 | 271 | 1 | 271 | 2.4e-143 | 517.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene88184 | 0.816881 | 4.40E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene88184 | 0.834981 | 2.19E-56 | -1.69E-46 |
| MS.gene050654 | MS.gene88184 | 0.8327 | 8.14E-56 | -1.69E-46 |
| MS.gene050941 | MS.gene88184 | 0.800945 | 1.14E-48 | -1.69E-46 |
| MS.gene051122 | MS.gene88184 | 0.807498 | 4.91E-50 | -1.69E-46 |
| MS.gene051184 | MS.gene88184 | 0.801817 | 7.53E-49 | -1.69E-46 |
| MS.gene051275 | MS.gene88184 | 0.807268 | 5.49E-50 | -1.69E-46 |
| MS.gene051831 | MS.gene88184 | 0.817952 | 2.53E-52 | -1.69E-46 |
| MS.gene052674 | MS.gene88184 | 0.804153 | 2.48E-49 | -1.69E-46 |
| MS.gene052675 | MS.gene88184 | 0.800843 | 1.19E-48 | -1.69E-46 |
| MS.gene052677 | MS.gene88184 | 0.80042 | 1.45E-48 | -1.69E-46 |
| MS.gene053726 | MS.gene88184 | 0.809111 | 2.22E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene88184 | 0.840009 | 1.13E-57 | -1.69E-46 |
| MS.gene054893 | MS.gene88184 | 0.838519 | 2.74E-57 | -1.69E-46 |
| MS.gene057155 | MS.gene88184 | 0.823868 | 1.10E-53 | -1.69E-46 |
| MS.gene057622 | MS.gene88184 | 0.804149 | 2.48E-49 | -1.69E-46 |
| MS.gene058429 | MS.gene88184 | 0.825405 | 4.77E-54 | -1.69E-46 |
| MS.gene058592 | MS.gene88184 | 0.818658 | 1.75E-52 | -1.69E-46 |
| MS.gene060259 | MS.gene88184 | 0.835125 | 2.01E-56 | -1.69E-46 |
| MS.gene060850 | MS.gene88184 | 0.819938 | 8.93E-53 | -1.69E-46 |
| MS.gene060851 | MS.gene88184 | 0.838322 | 3.08E-57 | -1.69E-46 |
| MS.gene060852 | MS.gene88184 | 0.838634 | 2.56E-57 | -1.69E-46 |
| MS.gene060932 | MS.gene88184 | 0.833384 | 5.50E-56 | -1.69E-46 |
| MS.gene06121 | MS.gene88184 | 0.806516 | 7.92E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88184.t1 | MTR_4g052300 | 96.198 | 263 | 10 | 0 | 9 | 271 | 3 | 265 | 0.0 | 515 |
| MS.gene88184.t1 | MTR_4g052350 | 82.657 | 271 | 47 | 0 | 1 | 271 | 1 | 271 | 1.74e-168 | 467 |
| MS.gene88184.t1 | MTR_4g052340 | 84.133 | 271 | 43 | 0 | 1 | 271 | 1 | 271 | 3.00e-167 | 464 |
| MS.gene88184.t1 | MTR_4g052320 | 87.500 | 264 | 32 | 1 | 9 | 271 | 3 | 266 | 3.22e-162 | 451 |
| MS.gene88184.t1 | MTR_7g105460 | 58.238 | 261 | 106 | 1 | 13 | 270 | 12 | 272 | 2.21e-100 | 294 |
| MS.gene88184.t1 | MTR_7g071680 | 51.460 | 274 | 108 | 5 | 12 | 262 | 27 | 298 | 2.29e-90 | 270 |
| MS.gene88184.t1 | MTR_7g107670 | 50.193 | 259 | 120 | 3 | 12 | 262 | 31 | 288 | 4.73e-79 | 241 |
| MS.gene88184.t1 | MTR_7g105590 | 60.870 | 184 | 72 | 0 | 12 | 195 | 6 | 189 | 3.24e-76 | 230 |
| MS.gene88184.t1 | MTR_7g110130 | 48.649 | 259 | 127 | 3 | 12 | 266 | 4 | 260 | 3.39e-76 | 233 |
| MS.gene88184.t1 | MTR_7g083870 | 48.519 | 270 | 124 | 5 | 12 | 269 | 33 | 299 | 8.76e-76 | 233 |
| MS.gene88184.t1 | MTR_2g090165 | 49.412 | 255 | 122 | 4 | 12 | 261 | 4 | 256 | 1.47e-75 | 231 |
| MS.gene88184.t1 | MTR_7g105580 | 50.196 | 255 | 102 | 4 | 12 | 261 | 6 | 240 | 1.93e-75 | 230 |
| MS.gene88184.t1 | MTR_6g023590 | 45.977 | 261 | 135 | 4 | 1 | 256 | 1 | 260 | 4.76e-75 | 229 |
| MS.gene88184.t1 | MTR_7g110140 | 48.819 | 254 | 125 | 3 | 13 | 262 | 5 | 257 | 1.03e-74 | 229 |
| MS.gene88184.t1 | MTR_3g020670 | 49.064 | 267 | 126 | 3 | 12 | 268 | 14 | 280 | 7.55e-74 | 227 |
| MS.gene88184.t1 | MTR_4g078630 | 46.241 | 266 | 125 | 4 | 10 | 262 | 15 | 275 | 8.80e-72 | 222 |
| MS.gene88184.t1 | MTR_7g105570 | 48.077 | 260 | 81 | 2 | 14 | 270 | 21 | 229 | 5.67e-71 | 218 |
| MS.gene88184.t1 | MTR_7g110160 | 47.244 | 254 | 111 | 3 | 12 | 261 | 4 | 238 | 5.60e-70 | 216 |
| MS.gene88184.t1 | MTR_6g023950 | 47.126 | 261 | 132 | 4 | 1 | 256 | 1 | 260 | 1.45e-69 | 216 |
| MS.gene88184.t1 | MTR_6g023610 | 46.245 | 253 | 131 | 3 | 8 | 255 | 7 | 259 | 3.55e-69 | 215 |
| MS.gene88184.t1 | MTR_6g023990 | 44.177 | 249 | 134 | 3 | 13 | 256 | 13 | 261 | 2.16e-68 | 213 |
| MS.gene88184.t1 | MTR_6g023910 | 46.614 | 251 | 123 | 5 | 13 | 255 | 12 | 259 | 3.80e-67 | 209 |
| MS.gene88184.t1 | MTR_6g023600 | 45.211 | 261 | 137 | 4 | 1 | 256 | 1 | 260 | 1.59e-66 | 208 |
| MS.gene88184.t1 | MTR_6g035395 | 45.833 | 264 | 121 | 5 | 12 | 271 | 3 | 248 | 2.32e-66 | 207 |
| MS.gene88184.t1 | MTR_6g023600 | 44.444 | 261 | 133 | 5 | 1 | 256 | 1 | 254 | 1.23e-61 | 195 |
| MS.gene88184.t1 | MTR_4g084800 | 62.121 | 132 | 50 | 0 | 12 | 143 | 11 | 142 | 2.46e-55 | 175 |
| MS.gene88184.t1 | MTR_3g113870 | 44.144 | 222 | 113 | 3 | 5 | 221 | 17 | 232 | 8.82e-54 | 174 |
| MS.gene88184.t1 | MTR_3g085740 | 31.765 | 255 | 164 | 6 | 8 | 257 | 69 | 318 | 1.33e-33 | 124 |
| MS.gene88184.t1 | MTR_1g082760 | 33.463 | 257 | 157 | 6 | 13 | 259 | 39 | 291 | 8.99e-28 | 108 |
| MS.gene88184.t1 | MTR_4g058840 | 30.769 | 273 | 177 | 7 | 4 | 267 | 1 | 270 | 2.75e-27 | 107 |
| MS.gene88184.t1 | MTR_4g058820 | 30.769 | 273 | 177 | 7 | 4 | 267 | 1 | 270 | 2.75e-27 | 107 |
| MS.gene88184.t1 | MTR_4g058810 | 30.000 | 270 | 163 | 8 | 14 | 267 | 11 | 270 | 4.05e-25 | 101 |
| MS.gene88184.t1 | MTR_7g113650 | 30.385 | 260 | 161 | 8 | 13 | 259 | 39 | 291 | 4.64e-25 | 101 |
| MS.gene88184.t1 | MTR_1g051165 | 30.827 | 266 | 163 | 9 | 11 | 259 | 11 | 272 | 5.49e-25 | 100 |
| MS.gene88184.t1 | MTR_4g131740 | 32.075 | 265 | 159 | 10 | 9 | 259 | 35 | 292 | 3.96e-24 | 99.0 |
| MS.gene88184.t1 | MTR_4g086400 | 34.426 | 244 | 134 | 9 | 16 | 244 | 6 | 238 | 2.17e-22 | 96.7 |
| MS.gene88184.t1 | MTR_3g068155 | 29.600 | 250 | 169 | 6 | 14 | 259 | 19 | 265 | 1.90e-21 | 91.3 |
| MS.gene88184.t1 | MTR_8g442750 | 29.927 | 274 | 162 | 9 | 14 | 268 | 14 | 276 | 6.56e-21 | 90.1 |
| MS.gene88184.t1 | MTR_4g086410 | 31.818 | 242 | 143 | 6 | 16 | 244 | 6 | 238 | 1.25e-20 | 91.7 |
| MS.gene88184.t1 | MTR_3g068070 | 28.682 | 258 | 169 | 7 | 14 | 264 | 15 | 264 | 1.43e-20 | 88.6 |
| MS.gene88184.t1 | MTR_8g096580 | 30.263 | 228 | 145 | 6 | 14 | 235 | 45 | 264 | 1.74e-20 | 89.4 |
| MS.gene88184.t1 | MTR_4g064887 | 28.235 | 255 | 166 | 7 | 14 | 259 | 15 | 261 | 2.04e-20 | 88.2 |
| MS.gene88184.t1 | MTR_1196s0010 | 28.794 | 257 | 163 | 7 | 8 | 256 | 268 | 512 | 2.30e-20 | 90.5 |
| MS.gene88184.t1 | MTR_3g068175 | 28.244 | 262 | 179 | 5 | 8 | 264 | 9 | 266 | 6.53e-20 | 87.0 |
| MS.gene88184.t1 | MTR_7g094510 | 28.676 | 272 | 159 | 10 | 1 | 256 | 1 | 253 | 8.35e-20 | 86.3 |
| MS.gene88184.t1 | MTR_4g132850 | 26.984 | 252 | 170 | 6 | 12 | 257 | 5 | 248 | 1.43e-19 | 85.9 |
| MS.gene88184.t1 | MTR_3g068085 | 28.462 | 260 | 167 | 7 | 14 | 264 | 15 | 264 | 2.89e-19 | 85.1 |
| MS.gene88184.t1 | MTR_7g063390 | 30.000 | 270 | 174 | 8 | 1 | 259 | 1 | 266 | 1.17e-18 | 83.6 |
| MS.gene88184.t1 | MTR_4g097510 | 30.220 | 182 | 123 | 3 | 15 | 195 | 3 | 181 | 2.47e-18 | 82.8 |
| MS.gene88184.t1 | MTR_3g068175 | 27.820 | 266 | 179 | 6 | 8 | 264 | 9 | 270 | 1.04e-17 | 80.9 |
| MS.gene88184.t1 | MTR_3g068065 | 26.667 | 255 | 178 | 7 | 14 | 264 | 17 | 266 | 1.34e-17 | 80.9 |
| MS.gene88184.t1 | MTR_4g064883 | 28.626 | 262 | 176 | 8 | 8 | 264 | 8 | 263 | 1.57e-17 | 80.5 |
| MS.gene88184.t1 | MTR_7g063320 | 30.952 | 252 | 161 | 7 | 14 | 256 | 15 | 262 | 5.41e-17 | 79.0 |
| MS.gene88184.t1 | MTR_7g105560 | 62.500 | 56 | 21 | 0 | 12 | 67 | 11 | 66 | 4.65e-16 | 73.9 |
| MS.gene88184.t1 | MTR_7g063330 | 27.273 | 253 | 172 | 7 | 14 | 258 | 15 | 263 | 1.05e-15 | 75.1 |
| MS.gene88184.t1 | MTR_7g063270 | 27.778 | 252 | 172 | 6 | 14 | 258 | 16 | 264 | 1.75e-15 | 74.7 |
| MS.gene88184.t1 | MTR_7g094520 | 26.587 | 252 | 172 | 4 | 14 | 256 | 11 | 258 | 2.71e-15 | 73.9 |
| MS.gene88184.t1 | MTR_4g064887 | 28.866 | 194 | 129 | 4 | 14 | 202 | 15 | 204 | 3.24e-15 | 73.2 |
| MS.gene88184.t1 | MTR_3g087850 | 30.556 | 180 | 117 | 4 | 18 | 195 | 30 | 203 | 1.67e-14 | 72.4 |
| MS.gene88184.t1 | MTR_7g063360 | 28.519 | 270 | 178 | 8 | 1 | 259 | 1 | 266 | 3.34e-14 | 71.2 |
| MS.gene88184.t1 | MTR_8g096620 | 25.238 | 210 | 151 | 4 | 16 | 222 | 47 | 253 | 3.66e-14 | 72.0 |
| MS.gene88184.t1 | MTR_7g063260 | 27.273 | 253 | 173 | 5 | 14 | 258 | 16 | 265 | 7.24e-14 | 70.1 |
| MS.gene88184.t1 | MTR_3g087860 | 30.120 | 166 | 109 | 3 | 31 | 195 | 29 | 188 | 1.56e-13 | 69.3 |
| MS.gene88184.t1 | MTR_4g064883 | 29.500 | 200 | 134 | 5 | 8 | 203 | 8 | 204 | 3.74e-13 | 67.4 |
| MS.gene88184.t1 | MTR_8g044240 | 28.824 | 170 | 115 | 2 | 20 | 183 | 75 | 244 | 1.20e-12 | 67.4 |
| MS.gene88184.t1 | MTR_4g058830 | 29.885 | 174 | 102 | 5 | 105 | 267 | 52 | 216 | 5.50e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88184.t1 | AT3G51680 | 52.920 | 274 | 108 | 6 | 12 | 266 | 30 | 301 | 9.76e-90 | 268 |
| MS.gene88184.t1 | AT2G47140 | 49.603 | 252 | 122 | 3 | 12 | 259 | 4 | 254 | 2.23e-77 | 235 |
| MS.gene88184.t1 | AT1G52340 | 49.446 | 271 | 122 | 3 | 12 | 268 | 16 | 285 | 3.46e-77 | 236 |
| MS.gene88184.t1 | AT4G03140 | 52.157 | 255 | 113 | 3 | 12 | 258 | 76 | 329 | 8.28e-76 | 234 |
| MS.gene88184.t1 | AT3G26770 | 48.062 | 258 | 120 | 4 | 12 | 258 | 39 | 293 | 8.50e-75 | 230 |
| MS.gene88184.t1 | AT3G29250 | 47.431 | 253 | 124 | 4 | 13 | 259 | 5 | 254 | 2.16e-73 | 225 |
| MS.gene88184.t1 | AT3G26760 | 44.697 | 264 | 134 | 3 | 6 | 258 | 28 | 290 | 7.77e-73 | 225 |
| MS.gene88184.t1 | AT3G29250 | 47.431 | 253 | 124 | 4 | 13 | 259 | 41 | 290 | 9.23e-73 | 225 |
| MS.gene88184.t1 | AT3G29250 | 46.899 | 258 | 127 | 5 | 9 | 259 | 38 | 292 | 6.91e-72 | 223 |
| MS.gene88184.t1 | AT2G47130 | 48.016 | 252 | 123 | 4 | 13 | 259 | 5 | 253 | 1.41e-71 | 221 |
| MS.gene88184.t1 | AT2G47120 | 46.484 | 256 | 128 | 5 | 9 | 259 | 2 | 253 | 1.67e-69 | 215 |
| MS.gene88184.t1 | AT2G47120 | 46.825 | 252 | 125 | 5 | 13 | 259 | 5 | 252 | 4.96e-69 | 214 |
| MS.gene88184.t1 | AT3G29260 | 46.825 | 252 | 128 | 4 | 12 | 259 | 4 | 253 | 3.78e-68 | 212 |
| MS.gene88184.t1 | AT3G42960 | 44.195 | 267 | 132 | 6 | 7 | 260 | 1 | 263 | 2.74e-57 | 184 |
| MS.gene88184.t1 | AT1G24360 | 30.000 | 260 | 160 | 7 | 11 | 259 | 71 | 319 | 1.03e-29 | 114 |
| MS.gene88184.t1 | AT3G55290 | 32.812 | 256 | 160 | 7 | 14 | 259 | 17 | 270 | 2.41e-29 | 112 |
| MS.gene88184.t1 | AT3G55290 | 32.812 | 256 | 160 | 7 | 14 | 259 | 18 | 271 | 2.62e-29 | 112 |
| MS.gene88184.t1 | AT1G63380 | 31.641 | 256 | 164 | 6 | 14 | 259 | 15 | 269 | 4.43e-28 | 109 |
| MS.gene88184.t1 | AT1G63380 | 31.641 | 256 | 164 | 6 | 14 | 259 | 22 | 276 | 4.88e-28 | 109 |
| MS.gene88184.t1 | AT1G63380 | 31.250 | 256 | 165 | 6 | 14 | 259 | 17 | 271 | 5.17e-28 | 108 |
| MS.gene88184.t1 | AT1G63380 | 31.641 | 256 | 164 | 6 | 14 | 259 | 19 | 273 | 5.55e-28 | 108 |
| MS.gene88184.t1 | AT2G17845 | 31.008 | 258 | 165 | 6 | 14 | 259 | 47 | 303 | 7.02e-28 | 109 |
| MS.gene88184.t1 | AT1G62610 | 30.469 | 256 | 167 | 6 | 14 | 259 | 15 | 269 | 2.30e-27 | 107 |
| MS.gene88184.t1 | AT1G62610 | 30.469 | 256 | 167 | 6 | 14 | 259 | 13 | 267 | 2.33e-27 | 107 |
| MS.gene88184.t1 | AT1G62610 | 30.469 | 256 | 167 | 6 | 14 | 259 | 14 | 268 | 2.38e-27 | 107 |
| MS.gene88184.t1 | AT1G62610 | 30.469 | 256 | 167 | 6 | 14 | 259 | 19 | 273 | 2.49e-27 | 107 |
| MS.gene88184.t1 | AT2G30670 | 30.769 | 260 | 173 | 4 | 14 | 270 | 7 | 262 | 1.25e-26 | 105 |
| MS.gene88184.t1 | AT3G55310 | 31.641 | 256 | 163 | 7 | 14 | 259 | 17 | 270 | 2.17e-26 | 104 |
| MS.gene88184.t1 | AT3G46170 | 30.418 | 263 | 159 | 8 | 13 | 259 | 25 | 279 | 1.12e-25 | 102 |
| MS.gene88184.t1 | AT2G47150 | 32.677 | 254 | 112 | 8 | 14 | 266 | 1 | 196 | 3.81e-24 | 96.7 |
| MS.gene88184.t1 | AT1G54870 | 31.538 | 260 | 158 | 8 | 13 | 259 | 83 | 335 | 3.81e-24 | 99.8 |
| MS.gene88184.t1 | AT1G54870 | 31.538 | 260 | 158 | 8 | 13 | 259 | 81 | 333 | 3.94e-24 | 99.8 |
| MS.gene88184.t1 | AT2G29330 | 30.078 | 256 | 168 | 6 | 14 | 264 | 7 | 256 | 7.22e-24 | 97.4 |
| MS.gene88184.t1 | AT3G05260 | 29.572 | 257 | 166 | 6 | 13 | 259 | 36 | 287 | 4.56e-23 | 95.9 |
| MS.gene88184.t1 | AT2G29340 | 29.134 | 254 | 173 | 4 | 14 | 264 | 7 | 256 | 1.51e-22 | 94.0 |
| MS.gene88184.t1 | AT2G29310 | 30.800 | 250 | 166 | 5 | 14 | 259 | 7 | 253 | 1.97e-22 | 93.6 |
| MS.gene88184.t1 | AT1G07450 | 30.588 | 255 | 167 | 7 | 14 | 264 | 8 | 256 | 2.33e-22 | 93.6 |
| MS.gene88184.t1 | AT2G29340 | 29.134 | 254 | 173 | 4 | 14 | 264 | 7 | 256 | 2.84e-22 | 94.0 |
| MS.gene88184.t1 | AT5G06060 | 28.627 | 255 | 173 | 6 | 14 | 264 | 9 | 258 | 6.30e-22 | 92.4 |
| MS.gene88184.t1 | AT2G29300 | 31.746 | 252 | 162 | 7 | 14 | 259 | 7 | 254 | 1.11e-21 | 91.7 |
| MS.gene88184.t1 | AT1G49670 | 35.000 | 200 | 116 | 5 | 16 | 202 | 6 | 204 | 4.68e-21 | 92.8 |
| MS.gene88184.t1 | AT2G29300 | 31.474 | 251 | 162 | 7 | 14 | 258 | 7 | 253 | 5.57e-21 | 90.1 |
| MS.gene88184.t1 | AT1G49670 | 35.000 | 200 | 116 | 5 | 16 | 202 | 6 | 204 | 6.47e-21 | 92.4 |
| MS.gene88184.t1 | AT4G05530 | 31.621 | 253 | 157 | 8 | 12 | 257 | 7 | 250 | 7.35e-21 | 89.4 |
| MS.gene88184.t1 | AT1G07440 | 27.559 | 254 | 176 | 5 | 14 | 264 | 12 | 260 | 1.84e-20 | 88.6 |
| MS.gene88184.t1 | AT2G29290 | 27.559 | 254 | 177 | 4 | 14 | 264 | 7 | 256 | 3.89e-20 | 87.4 |
| MS.gene88184.t1 | AT5G10050 | 31.694 | 183 | 117 | 4 | 15 | 195 | 6 | 182 | 4.12e-20 | 87.8 |
| MS.gene88184.t1 | AT2G29370 | 27.413 | 259 | 171 | 6 | 14 | 264 | 16 | 265 | 4.71e-20 | 87.4 |
| MS.gene88184.t1 | AT5G50690 | 32.044 | 181 | 108 | 5 | 13 | 185 | 44 | 217 | 6.42e-20 | 86.7 |
| MS.gene88184.t1 | AT5G50590 | 32.044 | 181 | 108 | 5 | 13 | 185 | 44 | 217 | 6.42e-20 | 86.7 |
| MS.gene88184.t1 | AT2G29350 | 28.244 | 262 | 180 | 5 | 6 | 264 | 7 | 263 | 6.55e-20 | 87.0 |
| MS.gene88184.t1 | AT5G18210 | 29.658 | 263 | 165 | 5 | 7 | 255 | 1 | 257 | 6.70e-20 | 86.7 |
| MS.gene88184.t1 | AT5G50690 | 32.044 | 181 | 108 | 5 | 13 | 185 | 44 | 217 | 1.49e-19 | 86.7 |
| MS.gene88184.t1 | AT5G50590 | 32.044 | 181 | 108 | 5 | 13 | 185 | 44 | 217 | 1.49e-19 | 86.7 |
| MS.gene88184.t1 | AT2G29260 | 28.205 | 273 | 175 | 7 | 2 | 264 | 56 | 317 | 1.79e-19 | 86.7 |
| MS.gene88184.t1 | AT2G29150 | 30.189 | 265 | 155 | 9 | 14 | 264 | 16 | 264 | 1.09e-18 | 83.6 |
| MS.gene88184.t1 | AT5G65205 | 32.973 | 185 | 112 | 6 | 15 | 195 | 7 | 183 | 1.73e-18 | 83.6 |
| MS.gene88184.t1 | AT2G29340 | 31.250 | 192 | 127 | 3 | 14 | 202 | 7 | 196 | 2.47e-18 | 81.3 |
| MS.gene88184.t1 | AT2G29340 | 31.250 | 192 | 127 | 3 | 14 | 202 | 7 | 196 | 2.47e-18 | 81.3 |
| MS.gene88184.t1 | AT5G18210 | 29.197 | 274 | 169 | 6 | 7 | 266 | 1 | 263 | 2.55e-18 | 82.8 |
| MS.gene88184.t1 | AT2G29320 | 30.000 | 260 | 170 | 8 | 11 | 264 | 10 | 263 | 3.44e-18 | 82.4 |
| MS.gene88184.t1 | AT2G29360 | 28.405 | 257 | 171 | 5 | 14 | 264 | 16 | 265 | 3.92e-18 | 82.0 |
| MS.gene88184.t1 | AT3G47350 | 30.348 | 201 | 124 | 6 | 16 | 208 | 46 | 238 | 8.83e-18 | 82.0 |
| MS.gene88184.t1 | AT5G50600 | 26.754 | 228 | 154 | 6 | 14 | 235 | 45 | 265 | 1.02e-17 | 82.0 |
| MS.gene88184.t1 | AT5G50700 | 26.754 | 228 | 154 | 6 | 14 | 235 | 45 | 265 | 1.02e-17 | 82.0 |
| MS.gene88184.t1 | AT3G47350 | 30.348 | 201 | 124 | 6 | 16 | 208 | 46 | 238 | 1.14e-17 | 81.3 |
| MS.gene88184.t1 | AT3G12800 | 29.885 | 261 | 166 | 7 | 14 | 261 | 10 | 266 | 1.19e-17 | 81.3 |
| MS.gene88184.t1 | AT1G10310 | 31.100 | 209 | 138 | 5 | 1 | 207 | 3 | 207 | 5.22e-17 | 78.6 |
| MS.gene88184.t1 | AT4G13180 | 29.710 | 276 | 171 | 9 | 1 | 266 | 1 | 263 | 8.30e-17 | 78.2 |
| MS.gene88184.t1 | AT2G29310 | 31.771 | 192 | 126 | 3 | 14 | 202 | 7 | 196 | 1.21e-16 | 76.6 |
| MS.gene88184.t1 | AT3G03980 | 26.882 | 279 | 170 | 8 | 1 | 256 | 1 | 268 | 6.17e-16 | 75.9 |
| MS.gene88184.t1 | AT2G29350 | 29.949 | 197 | 133 | 3 | 9 | 202 | 10 | 204 | 1.83e-15 | 73.9 |
| MS.gene88184.t1 | AT5G50770 | 31.500 | 200 | 131 | 5 | 16 | 212 | 47 | 243 | 1.87e-15 | 75.5 |
| MS.gene88184.t1 | AT2G29310 | 29.688 | 192 | 130 | 4 | 70 | 259 | 63 | 251 | 5.36e-15 | 73.2 |
| MS.gene88184.t1 | AT2G29290 | 27.041 | 196 | 138 | 3 | 70 | 264 | 48 | 239 | 1.22e-14 | 72.0 |
| MS.gene88184.t1 | AT2G29350 | 28.571 | 196 | 134 | 4 | 70 | 264 | 35 | 225 | 1.50e-14 | 71.6 |
| MS.gene88184.t1 | AT5G04900 | 31.361 | 169 | 111 | 2 | 20 | 183 | 83 | 251 | 1.77e-14 | 72.8 |
| MS.gene88184.t1 | AT2G29320 | 31.795 | 195 | 125 | 5 | 11 | 200 | 10 | 201 | 2.15e-13 | 67.8 |
| MS.gene88184.t1 | AT2G29320 | 29.146 | 199 | 131 | 7 | 70 | 264 | 53 | 245 | 4.87e-11 | 62.0 |
Find 76 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTGGACCATTCGGTATT+AGG | 0.230853 | 4.4:+50283231 | MS.gene88184:CDS |
| GCAGCTTCAGCCACATCTTT+AGG | 0.256732 | 4.4:-50283368 | None:intergenic |
| GTACAAGATTAGTACCCTTT+AGG | 0.308441 | 4.4:-50283346 | None:intergenic |
| AACTTGGTTGGCGTCTTTCT+TGG | 0.316400 | 4.4:+50283056 | MS.gene88184:CDS |
| GCTTGGACCATTCGGTATTA+GGG | 0.326280 | 4.4:+50283232 | MS.gene88184:CDS |
| ATAGGAGTCGCAAGAAAATA+AGG | 0.364524 | 4.4:-50283269 | None:intergenic |
| GATATCTAGTTTACCGTACT+TGG | 0.373680 | 4.4:-50282946 | None:intergenic |
| CTTGGAAACGGTTGTGTTCA+CGG | 0.391770 | 4.4:-50282928 | None:intergenic |
| AACTTGTTCATACCTTCTTA+AGG | 0.396248 | 4.4:-50282493 | None:intergenic |
| GGCTGAAGCTGCTCTGTACT+TGG | 0.402325 | 4.4:+50283379 | MS.gene88184:CDS |
| GGTCTTAATCTTGTCATAGA+TGG | 0.404623 | 4.4:+50283428 | MS.gene88184:CDS |
| ACCGGTGGTGCGAGCGGCAT+TGG | 0.406360 | 4.4:+50282750 | MS.gene88184:CDS |
| AAACAAATTATCTGAATTTG+AGG | 0.415679 | 4.4:+50283019 | MS.gene88184:CDS |
| TAGAGTGTCCTTTGTCGTCT+TGG | 0.425344 | 4.4:-50282830 | None:intergenic |
| GATGAGTCTAAGTATGTTAG+TGG | 0.435502 | 4.4:+50283407 | MS.gene88184:CDS |
| GTGATTAAAGTTAACTTGGT+TGG | 0.442187 | 4.4:+50283044 | MS.gene88184:CDS |
| AATTTCTTTAAGCTTGATGA+TGG | 0.444421 | 4.4:+50283299 | MS.gene88184:CDS |
| GGGAAGGTGGCTCTGATCAC+CGG | 0.449053 | 4.4:+50282732 | MS.gene88184:CDS |
| AGTTCAAAGCACGCCGTTGT+TGG | 0.452888 | 4.4:+50283185 | MS.gene88184:CDS |
| TCTTTAAGCTTGATGATGGT+GGG | 0.454681 | 4.4:+50283303 | MS.gene88184:CDS |
| GTTCAAAGCACGCCGTTGTT+GGG | 0.459124 | 4.4:+50283186 | MS.gene88184:CDS |
| GGAAGTGATTAAAGTTAACT+TGG | 0.460772 | 4.4:+50283040 | MS.gene88184:CDS |
| AACACAACCGTTTCCAAGTA+CGG | 0.463216 | 4.4:+50282933 | MS.gene88184:CDS |
| AGAAACACGGCCATCGAGCT+TGG | 0.469330 | 4.4:+50283215 | MS.gene88184:CDS |
| CAAGACTCTTCTCCGAGCAT+GGG | 0.470310 | 4.4:+50282784 | MS.gene88184:CDS |
| GCCATCGAGCTTGGACCATT+CGG | 0.474487 | 4.4:+50283224 | MS.gene88184:CDS |
| ATTTACAAGGCTTGAGGGGA+AGG | 0.480148 | 4.4:+50282716 | MS.gene88184:intron |
| ATTATGCTACCCCGTCGAGC+AGG | 0.480860 | 4.4:-50283107 | None:intergenic |
| GGTAATGATCCCTGCTCGAC+GGG | 0.482899 | 4.4:+50283097 | MS.gene88184:CDS |
| CTTTAAGCTTGATGATGGTG+GGG | 0.483378 | 4.4:+50283304 | MS.gene88184:CDS |
| ACCAATGCCGCTCGCACCAC+CGG | 0.490510 | 4.4:-50282751 | None:intergenic |
| AATTCATTTACAAGGCTTGA+GGG | 0.492849 | 4.4:+50282711 | MS.gene88184:intron |
| AACAATGGCAACCGTTCCAT+TGG | 0.500328 | 4.4:+50282461 | None:intergenic |
| TAGTTTACCGTACTTGGAAA+CGG | 0.505519 | 4.4:-50282940 | None:intergenic |
| GCAAGACTCTTCTCCGAGCA+TGG | 0.508760 | 4.4:+50282783 | MS.gene88184:CDS |
| TTCTTTAAGCTTGATGATGG+TGG | 0.511555 | 4.4:+50283302 | MS.gene88184:CDS |
| ACCAATGCTTCCACCAACAC+TGG | 0.517064 | 4.4:-50283138 | None:intergenic |
| AGTGTTGGTGGAAGCATTGG+TGG | 0.519339 | 4.4:+50283140 | MS.gene88184:CDS |
| CAATTCATTTACAAGGCTTG+AGG | 0.526989 | 4.4:+50282710 | MS.gene88184:intron |
| TTGGAACAAAGCATGCATCA+AGG | 0.538346 | 4.4:+50283075 | MS.gene88184:CDS |
| GCCAGTGTTGGTGGAAGCAT+TGG | 0.538454 | 4.4:+50283137 | MS.gene88184:CDS |
| AACGACTTGAGCCCCATGCT+CGG | 0.539844 | 4.4:-50282796 | None:intergenic |
| ATTAACACAGCCAGTGTTGG+TGG | 0.541696 | 4.4:+50283128 | MS.gene88184:CDS |
| TTAAAGAAATTTGTAACCAT+AGG | 0.542029 | 4.4:-50283287 | None:intergenic |
| GCTGAAGCTGCTCTGTACTT+GGG | 0.550906 | 4.4:+50283380 | MS.gene88184:CDS |
| CTTAAGGCATTAGAGACCAA+TGG | 0.551569 | 4.4:-50282477 | None:intergenic |
| ACCGAATGGTCCAAGCTCGA+TGG | 0.561776 | 4.4:-50283225 | None:intergenic |
| CTGATCACCGGTGGTGCGAG+CGG | 0.567749 | 4.4:+50282744 | MS.gene88184:CDS |
| TGGTGCGAGCGGCATTGGTG+AGG | 0.569615 | 4.4:+50282755 | MS.gene88184:CDS |
| TGTCACGTCACAACGAACAT+AGG | 0.574819 | 4.4:-50282883 | None:intergenic |
| TGGTCTCTAATGCCTTAAGA+AGG | 0.576031 | 4.4:+50282481 | MS.gene88184:CDS |
| TGGAACAAAGCATGCATCAA+GGG | 0.577105 | 4.4:+50283076 | MS.gene88184:CDS |
| TACAAGGCTTGAGGGGAAGG+TGG | 0.585321 | 4.4:+50282719 | MS.gene88184:intron |
| GGAGTCAGTGTCGCTAACAA+TGG | 0.587254 | 4.4:+50283452 | MS.gene88184:CDS |
| CTTAATCTTGTCATAGATGG+AGG | 0.588109 | 4.4:+50283431 | MS.gene88184:CDS |
| GGGTAATGATCCCTGCTCGA+CGG | 0.588135 | 4.4:+50283096 | MS.gene88184:CDS |
| GATATCATGTTTAACAACGC+TGG | 0.588151 | 4.4:+50282963 | MS.gene88184:CDS |
| AAGACTCTTCTCCGAGCATG+GGG | 0.588198 | 4.4:+50282785 | MS.gene88184:CDS |
| ATAATTAACACAGCCAGTGT+TGG | 0.597332 | 4.4:+50283125 | MS.gene88184:CDS |
| TTATGCTACCCCGTCGAGCA+GGG | 0.605399 | 4.4:-50283106 | None:intergenic |
| TTTAACAACGCTGGCATAAG+CGG | 0.605608 | 4.4:+50282972 | MS.gene88184:CDS |
| GGCATTAGAGACCAATGGAA+CGG | 0.606755 | 4.4:-50282472 | None:intergenic |
| ACAACGAACATAGGAAGAAG+AGG | 0.612882 | 4.4:-50282874 | None:intergenic |
| TGTTCGTTGTGACGTGACAA+AGG | 0.616110 | 4.4:+50282887 | MS.gene88184:CDS |
| TTTGAACTTGTGTAGGCATG+TGG | 0.618438 | 4.4:-50283170 | None:intergenic |
| GGCGTGCTTTGAACTTGTGT+AGG | 0.622128 | 4.4:-50283177 | None:intergenic |
| ATTCATTTACAAGGCTTGAG+GGG | 0.635187 | 4.4:+50282712 | MS.gene88184:intron |
| TAATCTTGTACCTAAAGATG+TGG | 0.641687 | 4.4:+50283358 | MS.gene88184:CDS |
| AAGGTGGCTCTGATCACCGG+TGG | 0.652302 | 4.4:+50282735 | MS.gene88184:CDS |
| GTTTCTCATCAGCCCAACAA+CGG | 0.652719 | 4.4:-50283198 | None:intergenic |
| CAATTCACCCTAATACCGAA+TGG | 0.666486 | 4.4:-50283239 | None:intergenic |
| GCTGACATCCAAGACGACAA+AGG | 0.668183 | 4.4:+50282822 | MS.gene88184:CDS |
| CAACGAACATAGGAAGAAGA+GGG | 0.668786 | 4.4:-50282873 | None:intergenic |
| TGTTGGGCTGATGAGAAACA+CGG | 0.693612 | 4.4:+50283202 | MS.gene88184:CDS |
| ATGCTCGGAGAAGAGTCTTG+CGG | 0.699817 | 4.4:-50282781 | None:intergenic |
| GTAATGATCCCTGCTCGACG+GGG | 0.704946 | 4.4:+50283098 | MS.gene88184:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTATTTTGTGTATATTAA+TGG | + | chr4.4:50282533-50282552 | MS.gene88184:intron | 10.0% |
| !! | GATTTATGAAAAAATATAAG+TGG | + | chr4.4:50282629-50282648 | MS.gene88184:intron | 15.0% |
| !! | TACACAAAATAAATGAAATA+AGG | - | chr4.4:50282527-50282546 | None:intergenic | 15.0% |
| !!! | TTATTTTACTTAAATTTGTG+TGG | - | chr4.4:50282678-50282697 | None:intergenic | 15.0% |
| !! | AAACAAATTATCTGAATTTG+AGG | + | chr4.4:50283019-50283038 | MS.gene88184:CDS | 20.0% |
| !! | CATAAATCGTATATTTATGT+AGG | - | chr4.4:50282617-50282636 | None:intergenic | 20.0% |
| !! | TTAAAGAAATTTGTAACCAT+AGG | - | chr4.4:50283290-50283309 | None:intergenic | 20.0% |
| !!! | AGATATTTTTTCTAACCTAA+AGG | + | chr4.4:50283331-50283350 | MS.gene88184:CDS | 20.0% |
| !!! | GATATTTTTTCTAACCTAAA+GGG | + | chr4.4:50283332-50283351 | MS.gene88184:CDS | 20.0% |
| ! | AAATATAAGTGGACATTTGA+AGG | + | chr4.4:50282640-50282659 | MS.gene88184:intron | 25.0% |
| ! | AATTTCTTTAAGCTTGATGA+TGG | + | chr4.4:50283299-50283318 | MS.gene88184:CDS | 25.0% |
| !! | CGTATATTTATGTAGGATTT+TGG | - | chr4.4:50282610-50282629 | None:intergenic | 25.0% |
| AATTCATTTACAAGGCTTGA+GGG | + | chr4.4:50282711-50282730 | MS.gene88184:intron | 30.0% | |
| AGATAATCACAGACTTAAGT+TGG | - | chr4.4:50282587-50282606 | None:intergenic | 30.0% | |
| GGAAGTGATTAAAGTTAACT+TGG | + | chr4.4:50283040-50283059 | MS.gene88184:CDS | 30.0% | |
| TAATCTTGTACCTAAAGATG+TGG | + | chr4.4:50283358-50283377 | MS.gene88184:CDS | 30.0% | |
| ! | AACTTGTTCATACCTTCTTA+AGG | - | chr4.4:50282496-50282515 | None:intergenic | 30.0% |
| ! | GTGATTAAAGTTAACTTGGT+TGG | + | chr4.4:50283044-50283063 | MS.gene88184:CDS | 30.0% |
| ATAATTAACACAGCCAGTGT+TGG | + | chr4.4:50283125-50283144 | MS.gene88184:CDS | 35.0% | |
| ATAGGAGTCGCAAGAAAATA+AGG | - | chr4.4:50283272-50283291 | None:intergenic | 35.0% | |
| ATTCATTTACAAGGCTTGAG+GGG | + | chr4.4:50282712-50282731 | MS.gene88184:intron | 35.0% | |
| CAATTCATTTACAAGGCTTG+AGG | + | chr4.4:50282710-50282729 | MS.gene88184:intron | 35.0% | |
| CTTAATCTTGTCATAGATGG+AGG | + | chr4.4:50283431-50283450 | MS.gene88184:CDS | 35.0% | |
| GATATCATGTTTAACAACGC+TGG | + | chr4.4:50282963-50282982 | MS.gene88184:CDS | 35.0% | |
| GATGAGTCTAAGTATGTTAG+TGG | + | chr4.4:50283407-50283426 | MS.gene88184:CDS | 35.0% | |
| GCATGCTCAATTCATTTACA+AGG | + | chr4.4:50282703-50282722 | MS.gene88184:intron | 35.0% | |
| GGTCTTAATCTTGTCATAGA+TGG | + | chr4.4:50283428-50283447 | MS.gene88184:CDS | 35.0% | |
| GTACAAGATTAGTACCCTTT+AGG | - | chr4.4:50283349-50283368 | None:intergenic | 35.0% | |
| TAGTTTACCGTACTTGGAAA+CGG | - | chr4.4:50282943-50282962 | None:intergenic | 35.0% | |
| ! | GATATCTAGTTTACCGTACT+TGG | - | chr4.4:50282949-50282968 | None:intergenic | 35.0% |
| ! | TTATTTTCTTGCGACTCCTA+TGG | + | chr4.4:50283271-50283290 | MS.gene88184:CDS | 35.0% |
| !! | TCTTTAAGCTTGATGATGGT+GGG | + | chr4.4:50283303-50283322 | MS.gene88184:CDS | 35.0% |
| !! | TTCTTTAAGCTTGATGATGG+TGG | + | chr4.4:50283302-50283321 | MS.gene88184:CDS | 35.0% |
| AACACAACCGTTTCCAAGTA+CGG | + | chr4.4:50282933-50282952 | MS.gene88184:CDS | 40.0% | |
| ACAACGAACATAGGAAGAAG+AGG | - | chr4.4:50282877-50282896 | None:intergenic | 40.0% | |
| CAACGAACATAGGAAGAAGA+GGG | - | chr4.4:50282876-50282895 | None:intergenic | 40.0% | |
| CAATTCACCCTAATACCGAA+TGG | - | chr4.4:50283242-50283261 | None:intergenic | 40.0% | |
| TGGAACAAAGCATGCATCAA+GGG | + | chr4.4:50283076-50283095 | MS.gene88184:CDS | 40.0% | |
| TGGTCTCTAATGCCTTAAGA+AGG | + | chr4.4:50282481-50282500 | MS.gene88184:CDS | 40.0% | |
| TTGGAACAAAGCATGCATCA+AGG | + | chr4.4:50283075-50283094 | MS.gene88184:CDS | 40.0% | |
| TTTAACAACGCTGGCATAAG+CGG | + | chr4.4:50282972-50282991 | MS.gene88184:CDS | 40.0% | |
| TTTGAACTTGTGTAGGCATG+TGG | - | chr4.4:50283173-50283192 | None:intergenic | 40.0% | |
| ! | CTTAAGGCATTAGAGACCAA+TGG | - | chr4.4:50282480-50282499 | None:intergenic | 40.0% |
| !! | CTTTAAGCTTGATGATGGTG+GGG | + | chr4.4:50283304-50283323 | MS.gene88184:CDS | 40.0% |
| AACTTGGTTGGCGTCTTTCT+TGG | + | chr4.4:50283056-50283075 | MS.gene88184:CDS | 45.0% | |
| AGCTTGGACCATTCGGTATT+AGG | + | chr4.4:50283231-50283250 | MS.gene88184:CDS | 45.0% | |
| ATTTACAAGGCTTGAGGGGA+AGG | + | chr4.4:50282716-50282735 | MS.gene88184:intron | 45.0% | |
| CTTGGAAACGGTTGTGTTCA+CGG | - | chr4.4:50282931-50282950 | None:intergenic | 45.0% | |
| GCTTGGACCATTCGGTATTA+GGG | + | chr4.4:50283232-50283251 | MS.gene88184:CDS | 45.0% | |
| GGCATTAGAGACCAATGGAA+CGG | - | chr4.4:50282475-50282494 | None:intergenic | 45.0% | |
| GTTTCTCATCAGCCCAACAA+CGG | - | chr4.4:50283201-50283220 | None:intergenic | 45.0% | |
| TGTCACGTCACAACGAACAT+AGG | - | chr4.4:50282886-50282905 | None:intergenic | 45.0% | |
| TGTTCGTTGTGACGTGACAA+AGG | + | chr4.4:50282887-50282906 | MS.gene88184:CDS | 45.0% | |
| TGTTGGGCTGATGAGAAACA+CGG | + | chr4.4:50283202-50283221 | MS.gene88184:CDS | 45.0% | |
| ! | ATTAACACAGCCAGTGTTGG+TGG | + | chr4.4:50283128-50283147 | MS.gene88184:CDS | 45.0% |
| ! | TAGAGTGTCCTTTGTCGTCT+TGG | - | chr4.4:50282833-50282852 | None:intergenic | 45.0% |
| !!! | AAATTTAAGTAAAATAATTT+TGG | + | chr4.4:50282681-50282700 | MS.gene88184:intron | 5.0% |
| AAGACTCTTCTCCGAGCATG+GGG | + | chr4.4:50282785-50282804 | MS.gene88184:CDS | 50.0% | |
| ACCAATGCTTCCACCAACAC+TGG | - | chr4.4:50283141-50283160 | None:intergenic | 50.0% | |
| AGTTCAAAGCACGCCGTTGT+TGG | + | chr4.4:50283185-50283204 | MS.gene88184:CDS | 50.0% | |
| ATGCTCGGAGAAGAGTCTTG+CGG | - | chr4.4:50282784-50282803 | None:intergenic | 50.0% | |
| CAAGACTCTTCTCCGAGCAT+GGG | + | chr4.4:50282784-50282803 | MS.gene88184:CDS | 50.0% | |
| GCAGCTTCAGCCACATCTTT+AGG | - | chr4.4:50283371-50283390 | None:intergenic | 50.0% | |
| GCTGAAGCTGCTCTGTACTT+GGG | + | chr4.4:50283380-50283399 | MS.gene88184:CDS | 50.0% | |
| GCTGACATCCAAGACGACAA+AGG | + | chr4.4:50282822-50282841 | MS.gene88184:CDS | 50.0% | |
| GTTCAAAGCACGCCGTTGTT+GGG | + | chr4.4:50283186-50283205 | MS.gene88184:CDS | 50.0% | |
| ! | GGAGTCAGTGTCGCTAACAA+TGG | + | chr4.4:50283452-50283471 | MS.gene88184:CDS | 50.0% |
| ! | GGCGTGCTTTGAACTTGTGT+AGG | - | chr4.4:50283180-50283199 | None:intergenic | 50.0% |
| !! | AGTGTTGGTGGAAGCATTGG+TGG | + | chr4.4:50283140-50283159 | MS.gene88184:CDS | 50.0% |
| AACGACTTGAGCCCCATGCT+CGG | - | chr4.4:50282799-50282818 | None:intergenic | 55.0% | |
| ACCGAATGGTCCAAGCTCGA+TGG | - | chr4.4:50283228-50283247 | None:intergenic | 55.0% | |
| AGAAACACGGCCATCGAGCT+TGG | + | chr4.4:50283215-50283234 | MS.gene88184:CDS | 55.0% | |
| ATTATGCTACCCCGTCGAGC+AGG | - | chr4.4:50283110-50283129 | None:intergenic | 55.0% | |
| GCAAGACTCTTCTCCGAGCA+TGG | + | chr4.4:50282783-50282802 | MS.gene88184:CDS | 55.0% | |
| GCCATCGAGCTTGGACCATT+CGG | + | chr4.4:50283224-50283243 | MS.gene88184:CDS | 55.0% | |
| GGCTGAAGCTGCTCTGTACT+TGG | + | chr4.4:50283379-50283398 | MS.gene88184:CDS | 55.0% | |
| GGGTAATGATCCCTGCTCGA+CGG | + | chr4.4:50283096-50283115 | MS.gene88184:CDS | 55.0% | |
| GGTAATGATCCCTGCTCGAC+GGG | + | chr4.4:50283097-50283116 | MS.gene88184:CDS | 55.0% | |
| GTAATGATCCCTGCTCGACG+GGG | + | chr4.4:50283098-50283117 | MS.gene88184:CDS | 55.0% | |
| TACAAGGCTTGAGGGGAAGG+TGG | + | chr4.4:50282719-50282738 | MS.gene88184:intron | 55.0% | |
| TTATGCTACCCCGTCGAGCA+GGG | - | chr4.4:50283109-50283128 | None:intergenic | 55.0% | |
| !! | GCCAGTGTTGGTGGAAGCAT+TGG | + | chr4.4:50283137-50283156 | MS.gene88184:CDS | 55.0% |
| !! | AAGGTGGCTCTGATCACCGG+TGG | + | chr4.4:50282735-50282754 | MS.gene88184:CDS | 60.0% |
| !! | GGGAAGGTGGCTCTGATCAC+CGG | + | chr4.4:50282732-50282751 | MS.gene88184:CDS | 60.0% |
| ACCAATGCCGCTCGCACCAC+CGG | - | chr4.4:50282754-50282773 | None:intergenic | 65.0% | |
| CTGATCACCGGTGGTGCGAG+CGG | + | chr4.4:50282744-50282763 | MS.gene88184:CDS | 65.0% | |
| !! | TGGTGCGAGCGGCATTGGTG+AGG | + | chr4.4:50282755-50282774 | MS.gene88184:CDS | 65.0% |
| ACCGGTGGTGCGAGCGGCAT+TGG | + | chr4.4:50282750-50282769 | MS.gene88184:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 50282465 | 50283502 | 50282465 | ID=MS.gene88184 |
| chr4.4 | mRNA | 50282465 | 50283502 | 50282465 | ID=MS.gene88184.t1;Parent=MS.gene88184 |
| chr4.4 | exon | 50282465 | 50282502 | 50282465 | ID=MS.gene88184.t1.exon1;Parent=MS.gene88184.t1 |
| chr4.4 | CDS | 50282465 | 50282502 | 50282465 | ID=cds.MS.gene88184.t1;Parent=MS.gene88184.t1 |
| chr4.4 | exon | 50282725 | 50283502 | 50282725 | ID=MS.gene88184.t1.exon2;Parent=MS.gene88184.t1 |
| chr4.4 | CDS | 50282725 | 50283502 | 50282725 | ID=cds.MS.gene88184.t1;Parent=MS.gene88184.t1 |
| Gene Sequence |
| Protein sequence |
