Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88630.t1 | RHN78432.1 | 91.1 | 281 | 15 | 1 | 1 | 281 | 1 | 271 | 8.70E-106 | 393.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88630.t1 | A0A072VGP8 | 91.1 | 281 | 15 | 1 | 1 | 281 | 1 | 271 | 6.2e-106 | 393.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene88630 | 0.883012 | 6.43E-71 | -1.69E-46 |
| MS.gene049758 | MS.gene88630 | 0.808643 | 2.80E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene88630 | 0.823691 | 1.21E-53 | -1.69E-46 |
| MS.gene050227 | MS.gene88630 | 0.825901 | 3.64E-54 | -1.69E-46 |
| MS.gene050228 | MS.gene88630 | 0.821636 | 3.63E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene88630 | 0.807495 | 4.92E-50 | -1.69E-46 |
| MS.gene050558 | MS.gene88630 | 0.848105 | 7.57E-60 | -1.69E-46 |
| MS.gene050642 | MS.gene88630 | 0.810364 | 1.20E-50 | -1.69E-46 |
| MS.gene050820 | MS.gene88630 | 0.82352 | 1.33E-53 | -1.69E-46 |
| MS.gene051662 | MS.gene88630 | 0.856818 | 2.49E-62 | -1.69E-46 |
| MS.gene051663 | MS.gene88630 | 0.86967 | 2.60E-66 | -1.69E-46 |
| MS.gene051860 | MS.gene88630 | 0.80646 | 8.14E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene88630 | 0.807427 | 5.08E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene88630 | 0.805649 | 1.21E-49 | -1.69E-46 |
| MS.gene052600 | MS.gene88630 | 0.832323 | 1.01E-55 | -1.69E-46 |
| MS.gene053630 | MS.gene88630 | 0.808191 | 3.50E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene88630 | 0.855117 | 7.82E-62 | -1.69E-46 |
| MS.gene054473 | MS.gene88630 | 0.802076 | 6.66E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene88630 | 0.802752 | 4.83E-49 | -1.69E-46 |
| MS.gene054942 | MS.gene88630 | 0.869994 | 2.04E-66 | -1.69E-46 |
| MS.gene054983 | MS.gene88630 | 0.802466 | 5.54E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene88630 | 0.818201 | 2.22E-52 | -1.69E-46 |
| MS.gene055428 | MS.gene88630 | 0.817048 | 4.03E-52 | -1.69E-46 |
| MS.gene056875 | MS.gene88630 | 0.836741 | 7.83E-57 | -1.69E-46 |
| MS.gene057121 | MS.gene88630 | 0.857644 | 1.42E-62 | -1.69E-46 |
| MS.gene057245 | MS.gene88630 | 0.809103 | 2.23E-50 | -1.69E-46 |
| MS.gene057260 | MS.gene88630 | 0.838251 | 3.21E-57 | -1.69E-46 |
| MS.gene057439 | MS.gene88630 | 0.8123 | 4.54E-51 | -1.69E-46 |
| MS.gene057539 | MS.gene88630 | 0.805542 | 1.27E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene88630 | 0.84998 | 2.28E-60 | -1.69E-46 |
| MS.gene05811 | MS.gene88630 | 0.80986 | 1.54E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene88630 | 0.821839 | 3.26E-53 | -1.69E-46 |
| MS.gene058749 | MS.gene88630 | 0.831191 | 1.92E-55 | -1.69E-46 |
| MS.gene058833 | MS.gene88630 | 0.841336 | 5.06E-58 | -1.69E-46 |
| MS.gene059247 | MS.gene88630 | 0.820839 | 5.55E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene88630 | 0.822868 | 1.88E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88630.t1 | MTR_1g039490 | 84.752 | 282 | 31 | 3 | 1 | 281 | 1 | 271 | 3.91e-149 | 422 |
| MS.gene88630.t1 | MTR_1g039490 | 85.000 | 280 | 30 | 3 | 1 | 279 | 1 | 269 | 6.51e-148 | 419 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene88630.t1 | AT5G08540 | 61.511 | 278 | 102 | 3 | 8 | 281 | 1 | 277 | 4.35e-109 | 322 |
Find 72 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCATATCCAGACAGGTTT+TGG | 0.271336 | 1.4:+24134371 | MS.gene88630:intron |
| GGTCAAAGCGGGCACAATTT+TGG | 0.277627 | 1.4:+24137150 | MS.gene88630:CDS |
| CTAGCTGTTCAGGCCCTCTT+TGG | 0.292467 | 1.4:+24136464 | MS.gene88630:CDS |
| CAAAGCGCAGCGCCGTAAAT+TGG | 0.306453 | 1.4:+24133007 | MS.gene88630:CDS |
| AAGAGGAAGAGATGAAATTA+AGG | 0.321398 | 1.4:+24133324 | MS.gene88630:CDS |
| GCTGTTCCGCTTGGTTATTT+AGG | 0.322575 | 1.4:+24132933 | MS.gene88630:CDS |
| ACAAGAAACGAACCAATTTA+CGG | 0.328436 | 1.4:-24133019 | None:intergenic |
| TCTCAAGGCTATTGAGAATA+AGG | 0.332468 | 1.4:+24133354 | MS.gene88630:CDS |
| AATTTACGGCGCTGCGCTTT+GGG | 0.337845 | 1.4:-24133005 | None:intergenic |
| CAATTTACGGCGCTGCGCTT+TGG | 0.344955 | 1.4:-24133006 | None:intergenic |
| CAAGAGAAAACTAGCTGTTC+AGG | 0.359683 | 1.4:+24136454 | MS.gene88630:CDS |
| CCGCTACAAAGCGGAGCGTT+TGG | 0.368741 | 1.4:+24137076 | MS.gene88630:CDS |
| ATTAAATCAGCTACAACATC+AGG | 0.370866 | 1.4:-24134452 | None:intergenic |
| GCGGGTGAAGTGGGCGCTAT+TGG | 0.381197 | 1.4:+24137104 | MS.gene88630:CDS |
| CCTGATTTATTCATTACAAT+AGG | 0.384185 | 1.4:-24136413 | None:intergenic |
| CGCTATTGGTGGAGCGGAGC+GGG | 0.385062 | 1.4:+24137118 | MS.gene88630:CDS |
| TAAATCAGGTTATACTGAAA+AGG | 0.391414 | 1.4:+24136427 | MS.gene88630:CDS |
| CGGGTTAGTGTTGTTGGAAG+AGG | 0.395276 | 1.4:-24132748 | None:intergenic |
| ATTATTCGGGTTAGTGTTGT+TGG | 0.400335 | 1.4:-24132754 | None:intergenic |
| TTTGTTTGGATTGATTATTC+GGG | 0.409804 | 1.4:-24132767 | None:intergenic |
| TAGCTGATTTAATTCAACTA+AGG | 0.440271 | 1.4:+24134462 | MS.gene88630:CDS |
| TCAGTTACACAAGCAATTCC+TGG | 0.441636 | 1.4:+24132873 | MS.gene88630:CDS |
| AAATCAGGTTATACTGAAAA+GGG | 0.451512 | 1.4:+24136428 | MS.gene88630:CDS |
| CCTATTGTAATGAATAAATC+AGG | 0.452441 | 1.4:+24136413 | MS.gene88630:CDS |
| GCCACTCCGCGCTGCGATAG+CGG | 0.455980 | 1.4:-24137030 | None:intergenic |
| CTTGACCTTGTTGAATTCAC+CGG | 0.459910 | 1.4:+24132849 | MS.gene88630:CDS |
| GGTGAAGTGGGCGCTATTGG+TGG | 0.468858 | 1.4:+24137107 | MS.gene88630:CDS |
| GTTTCTCATTCAGAGCATAT+CGG | 0.471136 | 1.4:-24134421 | None:intergenic |
| GAAGAAGAAGTAAAAGCCAT+TGG | 0.480454 | 1.4:-24132564 | None:intergenic |
| GCTACAACATCAGGGTTGAA+TGG | 0.484197 | 1.4:-24134443 | None:intergenic |
| TGGATTCTCGCTGTTCCGCT+TGG | 0.485199 | 1.4:+24132924 | MS.gene88630:CDS |
| GAGAATCCACGGCAATGAAG+TGG | 0.498552 | 1.4:-24132910 | None:intergenic |
| GAGCGGAGCGGGTCAATAGC+AGG | 0.502540 | 1.4:+24137129 | MS.gene88630:CDS |
| TGAAGCAACGGTTGAGATTG+AGG | 0.506664 | 1.4:-24132712 | None:intergenic |
| AAAGAACGGTTGAGATTGAA+AGG | 0.511231 | 1.4:-24132637 | None:intergenic |
| CGAAGAATTGTGCGAGACAA+AGG | 0.514186 | 1.4:+24134539 | MS.gene88630:CDS |
| GAAGAAGATAAGAACAAGAG+TGG | 0.515773 | 1.4:-24132684 | None:intergenic |
| AGCAATTCCTGGTCCACGAG+TGG | 0.518626 | 1.4:+24132884 | MS.gene88630:CDS |
| AGAACGGTTGAGATTGAAAG+GGG | 0.520327 | 1.4:-24132635 | None:intergenic |
| GCCGCTATCGCAGCGCGGAG+TGG | 0.524815 | 1.4:+24137029 | MS.gene88630:CDS |
| GGTCAATAGCAGGTCAAAGC+GGG | 0.531825 | 1.4:+24137139 | MS.gene88630:CDS |
| AAGTTGAAGAAGAACTTCCA+TGG | 0.535057 | 1.4:+24132811 | MS.gene88630:CDS |
| AGCGGAACAGCGAGAATCCA+CGG | 0.540855 | 1.4:-24132921 | None:intergenic |
| GTGGGACCCACTCGTGGACC+AGG | 0.541794 | 1.4:-24132891 | None:intergenic |
| TTGGAGAAAGCGGGTGAAGT+GGG | 0.544278 | 1.4:+24137095 | MS.gene88630:CDS |
| TGTTCAGGCCCTCTTTGGAA+AGG | 0.545946 | 1.4:+24136469 | MS.gene88630:CDS |
| TTTGGAGAAAGCGGGTGAAG+TGG | 0.547547 | 1.4:+24137094 | MS.gene88630:CDS |
| TGGGTCCCACTTCATTGCCG+TGG | 0.547911 | 1.4:+24132904 | MS.gene88630:CDS |
| AATTGCTTGTGTAACTGAAC+CGG | 0.552177 | 1.4:-24132868 | None:intergenic |
| AGCGGAGCGTTTGGAGAAAG+CGG | 0.560607 | 1.4:+24137085 | MS.gene88630:CDS |
| ATAGAAGACCTTTCCAAAGA+GGG | 0.564726 | 1.4:-24136477 | None:intergenic |
| GCGCTATTGGTGGAGCGGAG+CGG | 0.577200 | 1.4:+24137117 | MS.gene88630:CDS |
| AAGAACGGTTGAGATTGAAA+GGG | 0.579968 | 1.4:-24132636 | None:intergenic |
| AATTAAGGTTGATGATCTCA+AGG | 0.595749 | 1.4:+24133339 | MS.gene88630:CDS |
| GCGGAGCGTTTGGAGAAAGC+GGG | 0.597510 | 1.4:+24137086 | MS.gene88630:CDS |
| AGAATCCACGGCAATGAAGT+GGG | 0.599412 | 1.4:-24132909 | None:intergenic |
| CCAAACGCTCCGCTTTGTAG+CGG | 0.605109 | 1.4:-24137076 | None:intergenic |
| AGTGGGCGCTATTGGTGGAG+CGG | 0.606852 | 1.4:+24137112 | MS.gene88630:CDS |
| TTTCGATGATGCTGAAGCAA+CGG | 0.607673 | 1.4:-24132724 | None:intergenic |
| AATGAAGTGGGACCCACTCG+TGG | 0.613344 | 1.4:-24132897 | None:intergenic |
| GATAGAAGACCTTTCCAAAG+AGG | 0.622411 | 1.4:-24136478 | None:intergenic |
| GCAATTCCTGGTCCACGAGT+GGG | 0.631783 | 1.4:+24132885 | MS.gene88630:CDS |
| GTGGATGAGTTGTTGCAAAG+AGG | 0.637380 | 1.4:+24133307 | MS.gene88630:CDS |
| TGCAATGCTGTGTAAGTCGG+TGG | 0.642042 | 1.4:+24133288 | MS.gene88630:CDS |
| AGCGATGCACCGCTACAAAG+CGG | 0.651654 | 1.4:+24137067 | MS.gene88630:CDS |
| AAATGCAATGCTGTGTAAGT+CGG | 0.653400 | 1.4:+24133285 | MS.gene88630:CDS |
| AAAGGTCTTCTATCTATCTG+AGG | 0.657891 | 1.4:+24136487 | MS.gene88630:CDS |
| TTAAATCAGCTACAACATCA+GGG | 0.663431 | 1.4:-24134451 | None:intergenic |
| CTGAACCGGTGAATTCAACA+AGG | 0.671168 | 1.4:-24132854 | None:intergenic |
| GTAAGACCTAAATAACCAAG+CGG | 0.691105 | 1.4:-24132939 | None:intergenic |
| GGGTCAATAGCAGGTCAAAG+CGG | 0.693787 | 1.4:+24137138 | MS.gene88630:CDS |
| TAGCGGCCGCTATCGCAGCG+CGG | 0.750590 | 1.4:+24137024 | MS.gene88630:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTATTTAAAAAAAATAGTT+TGG | - | chr1.4:24135279-24135298 | None:intergenic | 10.0% |
| !!! | TAAAACAATTTTTAAATCTA+AGG | + | chr1.4:24135250-24135269 | MS.gene88630:intron | 10.0% |
| !!! | TATGTTAAATAAACTTTTTA+AGG | - | chr1.4:24136520-24136539 | None:intergenic | 10.0% |
| !!! | AAAATAAAACAGAATTTGTT+TGG | + | chr1.4:24135555-24135574 | MS.gene88630:intron | 15.0% |
| !!! | AAGATTTTTCACAAATATTT+AGG | - | chr1.4:24133720-24133739 | None:intergenic | 15.0% |
| !!! | ATAATACTGAAATTGTTTTA+GGG | + | chr1.4:24136663-24136682 | MS.gene88630:intron | 15.0% |
| !!! | ATTTTATTTCAATGATTTTC+AGG | + | chr1.4:24136389-24136408 | MS.gene88630:intron | 15.0% |
| !!! | CAAATTCTGTTTTATTTTAA+TGG | - | chr1.4:24135553-24135572 | None:intergenic | 15.0% |
| !!! | TAAAAACTTTAAAACTTGTT+TGG | + | chr1.4:24134992-24135011 | MS.gene88630:intron | 15.0% |
| !!! | TTGTTTGTTTTTGATATATA+AGG | + | chr1.4:24135422-24135441 | MS.gene88630:intron | 15.0% |
| !!! | TTTTATTTCAATGATTTTCA+GGG | + | chr1.4:24136390-24136409 | MS.gene88630:intron | 15.0% |
| !! | AATATAAACCTGCAAAATTA+AGG | - | chr1.4:24133796-24133815 | None:intergenic | 20.0% |
| !! | AGCATAATAGTTAATAGTAA+TGG | - | chr1.4:24136196-24136215 | None:intergenic | 20.0% |
| !! | AGGAATTTGAATAAAATAGA+AGG | + | chr1.4:24136048-24136067 | MS.gene88630:intron | 20.0% |
| !! | AGTATAGTTAGTATTACAAT+GGG | - | chr1.4:24135522-24135541 | None:intergenic | 20.0% |
| !! | ATAGTGTATCGTTAATTAAA+AGG | - | chr1.4:24133605-24133624 | None:intergenic | 20.0% |
| !! | ATATAAACCTGCAAAATTAA+GGG | - | chr1.4:24133795-24133814 | None:intergenic | 20.0% |
| !! | ATTAAAGATATTAAAGCCAT+AGG | - | chr1.4:24136726-24136745 | None:intergenic | 20.0% |
| !! | ATTTGCTCAACAATTATTAT+GGG | + | chr1.4:24136638-24136657 | MS.gene88630:intron | 20.0% |
| !! | CTAAAACAATTTCAGTATTA+TGG | - | chr1.4:24136664-24136683 | None:intergenic | 20.0% |
| !! | GGAATTTGAATAAAATAGAA+GGG | + | chr1.4:24136049-24136068 | MS.gene88630:intron | 20.0% |
| !! | TAAACAACAATACATTATGA+GGG | + | chr1.4:24133407-24133426 | MS.gene88630:intron | 20.0% |
| !! | TAGTATAGTTAGTATTACAA+TGG | - | chr1.4:24135523-24135542 | None:intergenic | 20.0% |
| !! | TAGTGTATCGTTAATTAAAA+GGG | - | chr1.4:24133604-24133623 | None:intergenic | 20.0% |
| !! | TTAAACAACAATACATTATG+AGG | + | chr1.4:24133406-24133425 | MS.gene88630:intron | 20.0% |
| !!! | AATTCTTTTTGTCTTTCATT+CGG | + | chr1.4:24136539-24136558 | MS.gene88630:intron | 20.0% |
| !!! | ACCTTTTTAAACTTTGAATA+TGG | + | chr1.4:24133826-24133845 | MS.gene88630:intron | 20.0% |
| !!! | ATTTATCATCTAAAATCCAA+TGG | - | chr1.4:24135388-24135407 | None:intergenic | 20.0% |
| !!! | CATAATACTGAAATTGTTTT+AGG | + | chr1.4:24136662-24136681 | MS.gene88630:intron | 20.0% |
| !!! | TACTTTTAAAAACAGCAAAA+TGG | - | chr1.4:24135056-24135075 | None:intergenic | 20.0% |
| !!! | TGTATTTTTTAGAAAAGTCA+AGG | - | chr1.4:24135194-24135213 | None:intergenic | 20.0% |
| !!! | TTGTTTTTGATATATAAGGT+TGG | + | chr1.4:24135426-24135445 | MS.gene88630:intron | 20.0% |
| !!! | TTTTAATTAACGATACACTA+TGG | + | chr1.4:24133604-24133623 | MS.gene88630:intron | 20.0% |
| !!! | TTTTGTTTGGATTGATTATT+CGG | - | chr1.4:24132771-24132790 | None:intergenic | 20.0% |
| !!! | TTTTTCCATTAATGAGAAAA+TGG | - | chr1.4:24135155-24135174 | None:intergenic | 20.0% |
| !!! | TTTTTCTAATTTTGGAGTTT+CGG | - | chr1.4:24135119-24135138 | None:intergenic | 20.0% |
| ! | AAAAAAATGATTTCATGGAC+TGG | - | chr1.4:24136308-24136327 | None:intergenic | 25.0% |
| ! | AAAAACCAAAACAGCAAATA+TGG | + | chr1.4:24135076-24135095 | MS.gene88630:intron | 25.0% |
| ! | AAAACCAAAACAGCAAATAT+GGG | + | chr1.4:24135077-24135096 | MS.gene88630:intron | 25.0% |
| ! | AAAATTGAATAACCACCAAT+AGG | + | chr1.4:24135983-24136002 | MS.gene88630:intron | 25.0% |
| ! | AAACAACAATACATTATGAG+GGG | + | chr1.4:24133408-24133427 | MS.gene88630:intron | 25.0% |
| ! | AAAGCAAAACTAAATCAAAC+AGG | + | chr1.4:24135338-24135357 | MS.gene88630:intron | 25.0% |
| ! | AAATACCATAAATACAGAAC+TGG | + | chr1.4:24133962-24133981 | MS.gene88630:intron | 25.0% |
| ! | AAATCAGGTTATACTGAAAA+GGG | + | chr1.4:24136428-24136447 | MS.gene88630:CDS | 25.0% |
| ! | AAATTGAATAACCACCAATA+GGG | + | chr1.4:24135984-24136003 | MS.gene88630:intron | 25.0% |
| ! | AAGTTACTTGTAAGTCAAAA+AGG | + | chr1.4:24136248-24136267 | MS.gene88630:intron | 25.0% |
| ! | ACTCCAAAATTAGAAAAACA+CGG | + | chr1.4:24135121-24135140 | MS.gene88630:intron | 25.0% |
| ! | ATATTACTAATAAGCCACAA+AGG | - | chr1.4:24134187-24134206 | None:intergenic | 25.0% |
| ! | ATTGACAAAGGTTTAATATC+TGG | + | chr1.4:24134668-24134687 | MS.gene88630:intron | 25.0% |
| ! | CAATCAAAAGTGATGAATAA+GGG | - | chr1.4:24135364-24135383 | None:intergenic | 25.0% |
| ! | CCTATTGTAATGAATAAATC+AGG | + | chr1.4:24136413-24136432 | MS.gene88630:CDS | 25.0% |
| ! | CCTGATTTATTCATTACAAT+AGG | - | chr1.4:24136416-24136435 | None:intergenic | 25.0% |
| ! | GCAGAAAAAAAATGATTTCA+TGG | - | chr1.4:24136313-24136332 | None:intergenic | 25.0% |
| ! | GCCATATTCAAAGTTTAAAA+AGG | - | chr1.4:24133830-24133849 | None:intergenic | 25.0% |
| ! | GTATAGTTAGTATTACAATG+GGG | - | chr1.4:24135521-24135540 | None:intergenic | 25.0% |
| ! | GTTAAGATTATCATATCAGA+TGG | - | chr1.4:24136607-24136626 | None:intergenic | 25.0% |
| ! | GTTGAATCACTAACAAAATA+TGG | - | chr1.4:24135735-24135754 | None:intergenic | 25.0% |
| ! | TAAATCAGGTTATACTGAAA+AGG | + | chr1.4:24136427-24136446 | MS.gene88630:CDS | 25.0% |
| ! | TAATAATTGTTGAGCAAATC+CGG | - | chr1.4:24136637-24136656 | None:intergenic | 25.0% |
| ! | TACAAACATTAAGGATGTAT+GGG | - | chr1.4:24135954-24135973 | None:intergenic | 25.0% |
| ! | TCTAGTTAAATGAAGAAGTT+CGG | + | chr1.4:24136338-24136357 | MS.gene88630:intron | 25.0% |
| ! | TGAAAAATCTTAGTGAAATG+TGG | + | chr1.4:24133729-24133748 | MS.gene88630:intron | 25.0% |
| ! | TGATATGATAATCTTAACTG+TGG | + | chr1.4:24136609-24136628 | MS.gene88630:intron | 25.0% |
| ! | TTGACAAAGGTTTAATATCT+GGG | + | chr1.4:24134669-24134688 | MS.gene88630:intron | 25.0% |
| ! | TTGTGGCTTATTAGTAATAT+AGG | + | chr1.4:24134187-24134206 | MS.gene88630:intron | 25.0% |
| ! | TTTGTTTGGATTGATTATTC+GGG | - | chr1.4:24132770-24132789 | None:intergenic | 25.0% |
| !! | AGTTGTTACTTAAAATCAGA+TGG | - | chr1.4:24134347-24134366 | None:intergenic | 25.0% |
| !! | GATTTGCTCAACAATTATTA+TGG | + | chr1.4:24136637-24136656 | MS.gene88630:intron | 25.0% |
| !! | TAGCTGATTTAATTCAACTA+AGG | + | chr1.4:24134462-24134481 | MS.gene88630:CDS | 25.0% |
| !! | TTCTAAAAAATACACAGGAT+TGG | + | chr1.4:24135200-24135219 | MS.gene88630:intron | 25.0% |
| !!! | AACAATTTCTTCGTTTTGTT+TGG | - | chr1.4:24132784-24132803 | None:intergenic | 25.0% |
| !!! | ATTTGCCATTTTCTCATTAA+TGG | + | chr1.4:24135147-24135166 | MS.gene88630:intron | 25.0% |
| !!! | CTGTATTTATGGTATTTTAG+TGG | - | chr1.4:24133959-24133978 | None:intergenic | 25.0% |
| !!! | GACTTTTCTAAAAAATACAC+AGG | + | chr1.4:24135195-24135214 | MS.gene88630:intron | 25.0% |
| !!! | GTTTGTTGTTTAATGATGTA+TGG | + | chr1.4:24133861-24133880 | MS.gene88630:intron | 25.0% |
| !!! | TATTTTTTGATCTAGACAGA+TGG | - | chr1.4:24134226-24134245 | None:intergenic | 25.0% |
| AAAATAGCAGTGGAGAAAAA+AGG | + | chr1.4:24136028-24136047 | MS.gene88630:intron | 30.0% | |
| AAATAGATCTCCAAACACTT+AGG | + | chr1.4:24134921-24134940 | MS.gene88630:intron | 30.0% | |
| AACATATTGTGGGATCTTAA+TGG | - | chr1.4:24135806-24135825 | None:intergenic | 30.0% | |
| AAGAGGAAGAGATGAAATTA+AGG | + | chr1.4:24133324-24133343 | MS.gene88630:CDS | 30.0% | |
| AATAGATCTCCAAACACTTA+GGG | + | chr1.4:24134922-24134941 | MS.gene88630:intron | 30.0% | |
| AATTAAGAAGTGGAGTGATT+AGG | + | chr1.4:24135469-24135488 | MS.gene88630:intron | 30.0% | |
| AATTGAATAACCACCAATAG+GGG | + | chr1.4:24135985-24136004 | MS.gene88630:intron | 30.0% | |
| ACAAGAAACGAACCAATTTA+CGG | - | chr1.4:24133022-24133041 | None:intergenic | 30.0% | |
| ACATGACATTCAACAGTTTA+AGG | - | chr1.4:24135908-24135927 | None:intergenic | 30.0% | |
| AGGTAATGTCTTCTTAATAC+TGG | + | chr1.4:24134559-24134578 | MS.gene88630:intron | 30.0% | |
| AGTTTCTCTGTTGTTAATAG+CGG | + | chr1.4:24137007-24137026 | MS.gene88630:intron | 30.0% | |
| ATAAACCCCAAAACAAAATG+AGG | - | chr1.4:24133889-24133908 | None:intergenic | 30.0% | |
| ATCCTTAATGTTTGTAGGTT+TGG | + | chr1.4:24135958-24135977 | MS.gene88630:intron | 30.0% | |
| ATTAAATCAGCTACAACATC+AGG | - | chr1.4:24134455-24134474 | None:intergenic | 30.0% | |
| ATTAAGATCCCACAATATGT+TGG | + | chr1.4:24135805-24135824 | MS.gene88630:intron | 30.0% | |
| CAATACCAGTTCTGTATTTA+TGG | - | chr1.4:24133970-24133989 | None:intergenic | 30.0% | |
| CAGTTAACAAAACCAAACAA+TGG | - | chr1.4:24134890-24134909 | None:intergenic | 30.0% | |
| CATACATCCTTAATGTTTGT+AGG | + | chr1.4:24135953-24135972 | MS.gene88630:intron | 30.0% | |
| CCAATCAAAAGTGATGAATA+AGG | - | chr1.4:24135365-24135384 | None:intergenic | 30.0% | |
| CTACAAACATTAAGGATGTA+TGG | - | chr1.4:24135955-24135974 | None:intergenic | 30.0% | |
| CTTGCTCTTTATATTGACAA+AGG | + | chr1.4:24134656-24134675 | MS.gene88630:intron | 30.0% | |
| GAACAATAATGTTTCTCAGT+TGG | + | chr1.4:24136140-24136159 | MS.gene88630:intron | 30.0% | |
| GAATTTGGATAAAATAGCAG+TGG | + | chr1.4:24136018-24136037 | MS.gene88630:intron | 30.0% | |
| TAAACCATAGAGTTCAAGTA+AGG | + | chr1.4:24136782-24136801 | MS.gene88630:intron | 30.0% | |
| TAATTATGTAGTCACCTTTG+TGG | + | chr1.4:24134170-24134189 | MS.gene88630:intron | 30.0% | |
| TAGTGGTATGGTATATTATC+AGG | - | chr1.4:24136701-24136720 | None:intergenic | 30.0% | |
| TCCATGATGTCAAATTCAAA+CGG | + | chr1.4:24134692-24134711 | MS.gene88630:intron | 30.0% | |
| TCCTTAATGTTTGTAGGTTT+GGG | + | chr1.4:24135959-24135978 | MS.gene88630:intron | 30.0% | |
| TTAAATCAGCTACAACATCA+GGG | - | chr1.4:24134454-24134473 | None:intergenic | 30.0% | |
| ! | ACTAAGTTGTTTCACTTAGA+TGG | - | chr1.4:24135583-24135602 | None:intergenic | 30.0% |
| ! | CAAAAAACCCTTAATTTTGC+AGG | + | chr1.4:24133785-24133804 | MS.gene88630:intron | 30.0% |
| ! | CACAAATATTTAGGATTGTG+AGG | - | chr1.4:24133711-24133730 | None:intergenic | 30.0% |
| ! | TCTCCGTGTTTTTCTAATTT+TGG | - | chr1.4:24135127-24135146 | None:intergenic | 30.0% |
| ! | TGGTCAATGCTTTAAATTTC+TGG | + | chr1.4:24133624-24133643 | MS.gene88630:intron | 30.0% |
| ! | TTTCTCTTCATTTTGCATGA+TGG | - | chr1.4:24136749-24136768 | None:intergenic | 30.0% |
| ! | TTTGATATATAAGGTTGGCT+TGG | + | chr1.4:24135431-24135450 | MS.gene88630:intron | 30.0% |
| ! | TTTGTTTGTTTCTTTGTTGC+AGG | + | chr1.4:24133255-24133274 | MS.gene88630:intron | 30.0% |
| !! | AATTAAGGTTGATGATCTCA+AGG | + | chr1.4:24133339-24133358 | MS.gene88630:CDS | 30.0% |
| !! | AGTTCTTAGCTTTCCTTTTA+CGG | + | chr1.4:24134245-24134264 | MS.gene88630:intron | 30.0% |
| !! | CCTTATTCATCACTTTTGAT+TGG | + | chr1.4:24135362-24135381 | MS.gene88630:intron | 30.0% |
| !!! | AAAACCCATATTTGCTGTTT+TGG | - | chr1.4:24135084-24135103 | None:intergenic | 30.0% |
| !!! | ATTCTAGAGAGATTTTTGGT+TGG | - | chr1.4:24132615-24132634 | None:intergenic | 30.0% |
| !!! | GGATTTTTAGTCGAATTTGT+CGG | + | chr1.4:24136070-24136089 | MS.gene88630:intron | 30.0% |
| !!! | GTTTTTTTGAGTGGAGTTTA+GGG | - | chr1.4:24132665-24132684 | None:intergenic | 30.0% |
| !!! | TTCTAGAGAGATTTTTGGTT+GGG | - | chr1.4:24132614-24132633 | None:intergenic | 30.0% |
| AAAATAAACTTCCACGCACA+AGG | - | chr1.4:24134607-24134626 | None:intergenic | 35.0% | |
| AAAGAACGGTTGAGATTGAA+AGG | - | chr1.4:24132640-24132659 | None:intergenic | 35.0% | |
| AAAGGTCTTCTATCTATCTG+AGG | + | chr1.4:24136487-24136506 | MS.gene88630:CDS | 35.0% | |
| AAATGCAATGCTGTGTAAGT+CGG | + | chr1.4:24133285-24133304 | MS.gene88630:CDS | 35.0% | |
| AAGAACGGTTGAGATTGAAA+GGG | - | chr1.4:24132639-24132658 | None:intergenic | 35.0% | |
| AAGTTGAAGAAGAACTTCCA+TGG | + | chr1.4:24132811-24132830 | MS.gene88630:CDS | 35.0% | |
| AATTCCGACCAACATATTGT+GGG | - | chr1.4:24135816-24135835 | None:intergenic | 35.0% | |
| AATTGCTTGTGTAACTGAAC+CGG | - | chr1.4:24132871-24132890 | None:intergenic | 35.0% | |
| AATTTCACCGAAGTTTAGAC+AGG | - | chr1.4:24134070-24134089 | None:intergenic | 35.0% | |
| ACCGTTTGAATTTGACATCA+TGG | - | chr1.4:24134696-24134715 | None:intergenic | 35.0% | |
| AGGGGCAGTAATAATGAATT+TGG | + | chr1.4:24136003-24136022 | MS.gene88630:intron | 35.0% | |
| AGTTAGTATTACAATGGGGT+GGG | - | chr1.4:24135517-24135536 | None:intergenic | 35.0% | |
| ATAGAAGACCTTTCCAAAGA+GGG | - | chr1.4:24136480-24136499 | None:intergenic | 35.0% | |
| ATTAACGTTAAGCTTGTGTG+TGG | - | chr1.4:24136855-24136874 | None:intergenic | 35.0% | |
| ATTGTTGTCATGTGACTGAA+AGG | + | chr1.4:24133453-24133472 | MS.gene88630:intron | 35.0% | |
| ATTTATCTGACCAATGTCAC+AGG | + | chr1.4:24135879-24135898 | MS.gene88630:intron | 35.0% | |
| CTAAGTGAAACAACTTAGTC+AGG | + | chr1.4:24135584-24135603 | MS.gene88630:intron | 35.0% | |
| CTATTCATTAGTACCTTCGA+GGG | + | chr1.4:24134818-24134837 | MS.gene88630:intron | 35.0% | |
| GAAGAAGATAAGAACAAGAG+TGG | - | chr1.4:24132687-24132706 | None:intergenic | 35.0% | |
| GATAATCTTAACTGTGGTTC+CGG | + | chr1.4:24136615-24136634 | MS.gene88630:intron | 35.0% | |
| GATGAGTTTCACTAAGAAAC+CGG | - | chr1.4:24136980-24136999 | None:intergenic | 35.0% | |
| GCTTCGTAGATTGTGATTAA+AGG | + | chr1.4:24133220-24133239 | MS.gene88630:intron | 35.0% | |
| GTAAGACCTAAATAACCAAG+CGG | - | chr1.4:24132942-24132961 | None:intergenic | 35.0% | |
| GTGCCTATTTGACTAACATA+GGG | - | chr1.4:24136954-24136973 | None:intergenic | 35.0% | |
| GTTTCTCATTCAGAGCATAT+CGG | - | chr1.4:24134424-24134443 | None:intergenic | 35.0% | |
| TAAACTTTGAATATGGCGTG+TGG | + | chr1.4:24133833-24133852 | MS.gene88630:intron | 35.0% | |
| TAAATCTCTCACAGCAGTAT+AGG | - | chr1.4:24136900-24136919 | None:intergenic | 35.0% | |
| TACAAAGTGAACACAGTTCA+GGG | - | chr1.4:24133755-24133774 | None:intergenic | 35.0% | |
| TAGTTAGTATTACAATGGGG+TGG | - | chr1.4:24135518-24135537 | None:intergenic | 35.0% | |
| TATTAAAGCCATAGGACTAG+TGG | - | chr1.4:24136718-24136737 | None:intergenic | 35.0% | |
| TCAAACAAACCCTAAGTGTT+TGG | - | chr1.4:24134934-24134953 | None:intergenic | 35.0% | |
| TCCCAAACCTACAAACATTA+AGG | - | chr1.4:24135963-24135982 | None:intergenic | 35.0% | |
| TCTCAAGGCTATTGAGAATA+AGG | + | chr1.4:24133354-24133373 | MS.gene88630:CDS | 35.0% | |
| TCTTTCGCAGGTTACAAAAA+TGG | - | chr1.4:24135780-24135799 | None:intergenic | 35.0% | |
| TGGAGTTTAGGGAAAAAGAA+CGG | - | chr1.4:24132654-24132673 | None:intergenic | 35.0% | |
| TGGTCATTTATGCCATTGTT+TGG | + | chr1.4:24134875-24134894 | MS.gene88630:intron | 35.0% | |
| TGTAGTAGACCTCTAAATTG+TGG | + | chr1.4:24133658-24133677 | MS.gene88630:intron | 35.0% | |
| TTCACCTTACTTGAACTCTA+TGG | - | chr1.4:24136789-24136808 | None:intergenic | 35.0% | |
| TTCATTATTACTGCCCCTAT+TGG | - | chr1.4:24136001-24136020 | None:intergenic | 35.0% | |
| TTCCTTTGGGTAACATTGAA+GGG | + | chr1.4:24134849-24134868 | MS.gene88630:intron | 35.0% | |
| TTGAATTTCCTGCATAGTAG+TGG | - | chr1.4:24134789-24134808 | None:intergenic | 35.0% | |
| TTGCGTACAATACACCAAAT+GGG | + | chr1.4:24133527-24133546 | MS.gene88630:intron | 35.0% | |
| ! | ATTCATATCCAGACAGGTTT+TGG | + | chr1.4:24134371-24134390 | MS.gene88630:intron | 35.0% |
| ! | TCTTTTGCCTGTCTAAACTT+CGG | + | chr1.4:24134060-24134079 | MS.gene88630:intron | 35.0% |
| ! | TTGTGCGTGGAAGTTTATTT+TGG | + | chr1.4:24134606-24134625 | MS.gene88630:intron | 35.0% |
| ! | TTTGTTTCTTTGTTGCAGGT+TGG | + | chr1.4:24133259-24133278 | MS.gene88630:intron | 35.0% |
| !! | AGAGCTTTTTCTTGAATCCA+TGG | - | chr1.4:24132831-24132850 | None:intergenic | 35.0% |
| !! | ATTATTCGGGTTAGTGTTGT+TGG | - | chr1.4:24132757-24132776 | None:intergenic | 35.0% |
| !! | CATATTTGGGTTGTATACTC+TGG | + | chr1.4:24136166-24136185 | MS.gene88630:intron | 35.0% |
| !! | GATGTATGGGTTGATTTACT+GGG | - | chr1.4:24135941-24135960 | None:intergenic | 35.0% |
| !! | GTTCTTAGCTTTCCTTTTAC+GGG | + | chr1.4:24134246-24134265 | MS.gene88630:intron | 35.0% |
| !! | TATGGCTCCTCATTTTGTTT+TGG | + | chr1.4:24133879-24133898 | MS.gene88630:intron | 35.0% |
| !! | TCTCAGTTGGTAGCATATTT+GGG | + | chr1.4:24136153-24136172 | MS.gene88630:intron | 35.0% |
| !! | TCTTAATGGATTTCTTTCGC+AGG | - | chr1.4:24135792-24135811 | None:intergenic | 35.0% |
| !! | TTCTCAGTTGGTAGCATATT+TGG | + | chr1.4:24136152-24136171 | MS.gene88630:intron | 35.0% |
| !! | TTTTTCAGCATCAATAGCCT+TGG | - | chr1.4:24135629-24135648 | None:intergenic | 35.0% |
| !!! | ACAAGAGTGGTTTTTTTGAG+TGG | - | chr1.4:24132674-24132693 | None:intergenic | 35.0% |
| !!! | ATGGCTCCTCATTTTGTTTT+GGG | + | chr1.4:24133880-24133899 | MS.gene88630:intron | 35.0% |
| !!! | GAAATTGTTTTAGGGAGATG+TGG | + | chr1.4:24136671-24136690 | MS.gene88630:intron | 35.0% |
| !!! | GGTTTTTTTGAGTGGAGTTT+AGG | - | chr1.4:24132666-24132685 | None:intergenic | 35.0% |
| !!! | GTGGAAGTTTATTTTGGCTT+AGG | + | chr1.4:24134612-24134631 | MS.gene88630:intron | 35.0% |
| AAAGGACCGATACAGAATCA+CGG | + | chr1.4:24136266-24136285 | MS.gene88630:intron | 40.0% | |
| AAGAAGTGGAGTGATTAGGA+GGG | + | chr1.4:24135473-24135492 | MS.gene88630:intron | 40.0% | |
| AATTTCCTGCATAGTAGTGG+TGG | - | chr1.4:24134786-24134805 | None:intergenic | 40.0% | |
| AGAACGGTTGAGATTGAAAG+GGG | - | chr1.4:24132638-24132657 | None:intergenic | 40.0% | |
| AGATCCCACAATATGTTGGT+CGG | + | chr1.4:24135809-24135828 | MS.gene88630:intron | 40.0% | |
| AGCCTCTTGTGTAAATAACC+GGG | + | chr1.4:24133499-24133518 | MS.gene88630:intron | 40.0% | |
| AGGCTATTGAGAATAAGGTG+AGG | + | chr1.4:24133359-24133378 | MS.gene88630:intron | 40.0% | |
| AGTCGAATTTGTCGGTACTA+TGG | + | chr1.4:24136078-24136097 | MS.gene88630:intron | 40.0% | |
| AGTCTGCAACCACAATTTAG+AGG | - | chr1.4:24133670-24133689 | None:intergenic | 40.0% | |
| AGTTTCACTAAGAAACCGGT+GGG | - | chr1.4:24136976-24136995 | None:intergenic | 40.0% | |
| ATACCATACCACTAGTCCTA+TGG | + | chr1.4:24136707-24136726 | MS.gene88630:intron | 40.0% | |
| ATATCAGAGTCTATCCTTGC+AGG | - | chr1.4:24135857-24135876 | None:intergenic | 40.0% | |
| ATCTCGTTCTCTTACCACTA+CGG | - | chr1.4:24135697-24135716 | None:intergenic | 40.0% | |
| ATGTTGGTCGGAATTGCTAA+AGG | + | chr1.4:24135821-24135840 | MS.gene88630:intron | 40.0% | |
| ATTATTACTGCCCCTATTGG+TGG | - | chr1.4:24135998-24136017 | None:intergenic | 40.0% | |
| CAAGAGAAAACTAGCTGTTC+AGG | + | chr1.4:24136454-24136473 | MS.gene88630:CDS | 40.0% | |
| CAATTCCGACCAACATATTG+TGG | - | chr1.4:24135817-24135836 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAATAAC+CGG | + | chr1.4:24133498-24133517 | MS.gene88630:intron | 40.0% | |
| CATGTTCCGTGATTCTGTAT+CGG | - | chr1.4:24136275-24136294 | None:intergenic | 40.0% | |
| CCATCACGATGAATTGATGA+TGG | - | chr1.4:24134003-24134022 | None:intergenic | 40.0% | |
| CCATCATCAATTCATCGTGA+TGG | + | chr1.4:24134000-24134019 | MS.gene88630:intron | 40.0% | |
| CCTATTCATTAGTACCTTCG+AGG | + | chr1.4:24134817-24134836 | MS.gene88630:intron | 40.0% | |
| CGTTAATTAAAAGGGCAACC+CGG | - | chr1.4:24133596-24133615 | None:intergenic | 40.0% | |
| CTACAAAGTGAACACAGTTC+AGG | - | chr1.4:24133756-24133775 | None:intergenic | 40.0% | |
| CTGCAAATTCATATCCAGAC+AGG | + | chr1.4:24134365-24134384 | MS.gene88630:intron | 40.0% | |
| CTTGACCTTGTTGAATTCAC+CGG | + | chr1.4:24132849-24132868 | MS.gene88630:CDS | 40.0% | |
| CTTGTGTAAATAACCGGGTA+AGG | + | chr1.4:24133504-24133523 | MS.gene88630:intron | 40.0% | |
| GAGCCCTATGTTAGTCAAAT+AGG | + | chr1.4:24136948-24136967 | MS.gene88630:intron | 40.0% | |
| GAGGGAAAAGTAGTTCCTTT+GGG | + | chr1.4:24134836-24134855 | MS.gene88630:intron | 40.0% | |
| GATAGAAGACCTTTCCAAAG+AGG | - | chr1.4:24136481-24136500 | None:intergenic | 40.0% | |
| GGTGCCTATTTGACTAACAT+AGG | - | chr1.4:24136955-24136974 | None:intergenic | 40.0% | |
| GTTAGTATTACAATGGGGTG+GGG | - | chr1.4:24135516-24135535 | None:intergenic | 40.0% | |
| GTTCCTTTGGGTAACATTGA+AGG | + | chr1.4:24134848-24134867 | MS.gene88630:intron | 40.0% | |
| GTTGCGTACAATACACCAAA+TGG | + | chr1.4:24133526-24133545 | MS.gene88630:intron | 40.0% | |
| TAAGAAGTGGAGTGATTAGG+AGG | + | chr1.4:24135472-24135491 | MS.gene88630:intron | 40.0% | |
| TACATTATGAGGGGTAACCT+TGG | + | chr1.4:24133417-24133436 | MS.gene88630:intron | 40.0% | |
| TACCCGGTTATTTACACAAG+AGG | - | chr1.4:24133504-24133523 | None:intergenic | 40.0% | |
| TATCAGAGTCTATCCTTGCA+GGG | - | chr1.4:24135856-24135875 | None:intergenic | 40.0% | |
| TCAGTTACACAAGCAATTCC+TGG | + | chr1.4:24132873-24132892 | MS.gene88630:CDS | 40.0% | |
| TGCGTACAATACACCAAATG+GGG | + | chr1.4:24133528-24133547 | MS.gene88630:intron | 40.0% | |
| TGGTTAAGATACAACTCTGC+TGG | - | chr1.4:24135760-24135779 | None:intergenic | 40.0% | |
| TTAAGATACAACTCTGCTGG+TGG | - | chr1.4:24135757-24135776 | None:intergenic | 40.0% | |
| TTTCGATGATGCTGAAGCAA+CGG | - | chr1.4:24132727-24132746 | None:intergenic | 40.0% | |
| TTTGTCTTCCTGTGCAAATG+TGG | + | chr1.4:24134321-24134340 | MS.gene88630:intron | 40.0% | |
| ! | AGTAGTGGTGGTGAATTGTT+TGG | - | chr1.4:24134774-24134793 | None:intergenic | 40.0% |
| ! | CTGGACACAGTTTTCATTTG+AGG | + | chr1.4:24134578-24134597 | MS.gene88630:intron | 40.0% |
| ! | GTAGTGGTGGTGAATTGTTT+GGG | - | chr1.4:24134773-24134792 | None:intergenic | 40.0% |
| ! | GTCTTCTATCTATCTGAGGT+AGG | + | chr1.4:24136491-24136510 | MS.gene88630:intron | 40.0% |
| ! | TAGCTTTCCTTTTACGGGTT+GGG | + | chr1.4:24134251-24134270 | MS.gene88630:intron | 40.0% |
| !! | ATGGGTTGATTTACTGGGAA+GGG | - | chr1.4:24135936-24135955 | None:intergenic | 40.0% |
| !! | CATCACTTTTGATTGGCCAT+TGG | + | chr1.4:24135369-24135388 | MS.gene88630:intron | 40.0% |
| !! | CCTCGAAGGTACTAATGAAT+AGG | - | chr1.4:24134820-24134839 | None:intergenic | 40.0% |
| !! | GATATATAAGGTTGGCTTGG+TGG | + | chr1.4:24135434-24135453 | MS.gene88630:intron | 40.0% |
| !! | GGATGTATGGGTTGATTTAC+TGG | - | chr1.4:24135942-24135961 | None:intergenic | 40.0% |
| !! | GGCTGTGTAGAAAAGTATTC+TGG | + | chr1.4:24134633-24134652 | MS.gene88630:intron | 40.0% |
| !! | GGGGATTCTAGAGAGATTTT+TGG | - | chr1.4:24132619-24132638 | None:intergenic | 40.0% |
| !! | TATGGGTTGATTTACTGGGA+AGG | - | chr1.4:24135937-24135956 | None:intergenic | 40.0% |
| !! | TTAGCTTTCCTTTTACGGGT+TGG | + | chr1.4:24134250-24134269 | MS.gene88630:intron | 40.0% |
| !!! | AGAGATTTTTGGTTGGGAGA+GGG | - | chr1.4:24132608-24132627 | None:intergenic | 40.0% |
| !!! | GCATCGCTTTTTGTCAGTTT+TGG | - | chr1.4:24137055-24137074 | None:intergenic | 40.0% |
| !!! | TATCCAGACAGGTTTTGGTT+TGG | + | chr1.4:24134376-24134395 | MS.gene88630:intron | 40.0% |
| !!! | TGGCTCCTCATTTTGTTTTG+GGG | + | chr1.4:24133881-24133900 | MS.gene88630:intron | 40.0% |
| AGAATCCACGGCAATGAAGT+GGG | - | chr1.4:24132912-24132931 | None:intergenic | 45.0% | |
| ATTCACCACCACTACTATGC+AGG | + | chr1.4:24134778-24134797 | MS.gene88630:intron | 45.0% | |
| ATTTGAGGAATCCTTGTGCG+TGG | + | chr1.4:24134593-24134612 | MS.gene88630:intron | 45.0% | |
| CGAAGAATTGTGCGAGACAA+AGG | + | chr1.4:24134539-24134558 | MS.gene88630:CDS | 45.0% | |
| CGAGGGAAAAGTAGTTCCTT+TGG | + | chr1.4:24134835-24134854 | MS.gene88630:intron | 45.0% | |
| CGTACAATACACCAAATGGG+GGG | + | chr1.4:24133530-24133549 | MS.gene88630:intron | 45.0% | |
| CTAACCAGTAGAGAGTCACA+AGG | + | chr1.4:24136923-24136942 | MS.gene88630:intron | 45.0% | |
| CTGAACCGGTGAATTCAACA+AGG | - | chr1.4:24132857-24132876 | None:intergenic | 45.0% | |
| CTTCCAAACCAAAACCTGTC+TGG | - | chr1.4:24134382-24134401 | None:intergenic | 45.0% | |
| CTTCTGATGGAAGACGTGTT+CGG | + | chr1.4:24133088-24133107 | MS.gene88630:intron | 45.0% | |
| GACCCTTCAATGTTACCCAA+AGG | - | chr1.4:24134854-24134873 | None:intergenic | 45.0% | |
| GAGTTTCACTAAGAAACCGG+TGG | - | chr1.4:24136977-24136996 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+GGG | + | chr1.4:24133529-24133548 | MS.gene88630:intron | 45.0% | |
| GCTACAACATCAGGGTTGAA+TGG | - | chr1.4:24134446-24134465 | None:intergenic | 45.0% | |
| GCTGTTCCGCTTGGTTATTT+AGG | + | chr1.4:24132933-24132952 | MS.gene88630:CDS | 45.0% | |
| GTATTGTACGCAACCTTACC+CGG | - | chr1.4:24133520-24133539 | None:intergenic | 45.0% | |
| GTGGATGAGTTGTTGCAAAG+AGG | + | chr1.4:24133307-24133326 | MS.gene88630:CDS | 45.0% | |
| TGAAGCAACGGTTGAGATTG+AGG | - | chr1.4:24132715-24132734 | None:intergenic | 45.0% | |
| TGGGTAACATTGAAGGGTCT+TGG | + | chr1.4:24134855-24134874 | MS.gene88630:intron | 45.0% | |
| TTAGTCAAATAGGCACCCAC+CGG | + | chr1.4:24136958-24136977 | MS.gene88630:intron | 45.0% | |
| ! | AAGCCATAGGACTAGTGGTA+TGG | - | chr1.4:24136713-24136732 | None:intergenic | 45.0% |
| ! | AATAGCCTTGGACTTTGGCA+AGG | - | chr1.4:24135617-24135636 | None:intergenic | 45.0% |
| ! | CAATTTTACCAGTTGCGCCA+AGG | - | chr1.4:24133437-24133456 | None:intergenic | 45.0% |
| ! | GATTTTCCCCAACCCGTAAA+AGG | - | chr1.4:24134261-24134280 | None:intergenic | 45.0% |
| ! | GCATCAATAGCCTTGGACTT+TGG | - | chr1.4:24135622-24135641 | None:intergenic | 45.0% |
| ! | GTACTGACACACACTTCTGA+TGG | + | chr1.4:24133075-24133094 | MS.gene88630:intron | 45.0% |
| ! | TAGCAGAGGCTTTTCTCAGA+GGG | - | chr1.4:24135671-24135690 | None:intergenic | 45.0% |
| ! | TTTAAGGCAGCCTGTGACAT+TGG | - | chr1.4:24135892-24135911 | None:intergenic | 45.0% |
| !! | AGCTTTCCTTTTACGGGTTG+GGG | + | chr1.4:24134252-24134271 | MS.gene88630:intron | 45.0% |
| !! | AGGAACTACTTTTCCCTCGA+AGG | - | chr1.4:24134834-24134853 | None:intergenic | 45.0% |
| !! | ATAAGGTTGGCTTGGTGGTT+GGG | + | chr1.4:24135439-24135458 | MS.gene88630:intron | 45.0% |
| !! | TATAAGGTTGGCTTGGTGGT+TGG | + | chr1.4:24135438-24135457 | MS.gene88630:intron | 45.0% |
| !!! | GAGAGATTTTTGGTTGGGAG+AGG | - | chr1.4:24132609-24132628 | None:intergenic | 45.0% |
| AAGGCTGTAGAATCCCTGCA+AGG | + | chr1.4:24135840-24135859 | MS.gene88630:intron | 50.0% | |
| AATTTACGGCGCTGCGCTTT+GGG | - | chr1.4:24133008-24133027 | None:intergenic | 50.0% | |
| AGGGAAGAGGTTCAGTTGCA+TGG | - | chr1.4:24135652-24135671 | None:intergenic | 50.0% | |
| AGTATTACAATGGGGTGGGG+TGG | - | chr1.4:24135513-24135532 | None:intergenic | 50.0% | |
| CACATGTGTCAGTGTCACGT+CGG | - | chr1.4:24133121-24133140 | None:intergenic | 50.0% | |
| GAGAATCCACGGCAATGAAG+TGG | - | chr1.4:24132913-24132932 | None:intergenic | 50.0% | |
| GGGGTGGAGGAATTAAGAAG+TGG | + | chr1.4:24135459-24135478 | MS.gene88630:intron | 50.0% | |
| GGGTCAATAGCAGGTCAAAG+CGG | + | chr1.4:24137138-24137157 | MS.gene88630:CDS | 50.0% | |
| GGTCAATAGCAGGTCAAAGC+GGG | + | chr1.4:24137139-24137158 | MS.gene88630:CDS | 50.0% | |
| GTATTACAATGGGGTGGGGT+GGG | - | chr1.4:24135512-24135531 | None:intergenic | 50.0% | |
| TACCACTACGGATCTAGCAG+AGG | - | chr1.4:24135685-24135704 | None:intergenic | 50.0% | |
| TATTACAATGGGGTGGGGTG+GGG | - | chr1.4:24135511-24135530 | None:intergenic | 50.0% | |
| TCAGATGGCCACATTTGCAC+AGG | - | chr1.4:24134332-24134351 | None:intergenic | 50.0% | |
| TCTGCCTTGTGACTCTCTAC+TGG | - | chr1.4:24136930-24136949 | None:intergenic | 50.0% | |
| TGCAATGCTGTGTAAGTCGG+TGG | + | chr1.4:24133288-24133307 | MS.gene88630:CDS | 50.0% | |
| TGGAGTGATTAGGAGGGAGA+GGG | + | chr1.4:24135479-24135498 | MS.gene88630:intron | 50.0% | |
| TTGGAGAAAGCGGGTGAAGT+GGG | + | chr1.4:24137095-24137114 | MS.gene88630:CDS | 50.0% | |
| TTTGGAGAAAGCGGGTGAAG+TGG | + | chr1.4:24137094-24137113 | MS.gene88630:CDS | 50.0% | |
| ! | AGGCTTTTCTCAGAGGGAAG+AGG | - | chr1.4:24135665-24135684 | None:intergenic | 50.0% |
| ! | ATGCGGGAGCTTTAGTACAC+CGG | + | chr1.4:24133574-24133593 | MS.gene88630:intron | 50.0% |
| ! | CTAGCAGAGGCTTTTCTCAG+AGG | - | chr1.4:24135672-24135691 | None:intergenic | 50.0% |
| ! | GGTCAAAGCGGGCACAATTT+TGG | + | chr1.4:24137150-24137169 | MS.gene88630:CDS | 50.0% |
| ! | TGTTCAGGCCCTCTTTGGAA+AGG | + | chr1.4:24136469-24136488 | MS.gene88630:CDS | 50.0% |
| !! | CGGGTTAGTGTTGTTGGAAG+AGG | - | chr1.4:24132751-24132770 | None:intergenic | 50.0% |
| !! | TAAGGTTGGCTTGGTGGTTG+GGG | + | chr1.4:24135440-24135459 | MS.gene88630:intron | 50.0% |
| AATGAAGTGGGACCCACTCG+TGG | - | chr1.4:24132900-24132919 | None:intergenic | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | - | chr1.4:24133570-24133589 | None:intergenic | 55.0% | |
| AGCAATTCCTGGTCCACGAG+TGG | + | chr1.4:24132884-24132903 | MS.gene88630:CDS | 55.0% | |
| AGCCTCTGCTAGATCCGTAG+TGG | + | chr1.4:24135680-24135699 | MS.gene88630:intron | 55.0% | |
| AGCCTTGGACTTTGGCAAGG+TGG | - | chr1.4:24135614-24135633 | None:intergenic | 55.0% | |
| AGCGATGCACCGCTACAAAG+CGG | + | chr1.4:24137067-24137086 | MS.gene88630:CDS | 55.0% | |
| AGCGGAACAGCGAGAATCCA+CGG | - | chr1.4:24132924-24132943 | None:intergenic | 55.0% | |
| CAAAGCGCAGCGCCGTAAAT+TGG | + | chr1.4:24133007-24133026 | MS.gene88630:CDS | 55.0% | |
| CAATTTACGGCGCTGCGCTT+TGG | - | chr1.4:24133009-24133028 | None:intergenic | 55.0% | |
| CCAAACGCTCCGCTTTGTAG+CGG | - | chr1.4:24137079-24137098 | None:intergenic | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | - | chr1.4:24133569-24133588 | None:intergenic | 55.0% | |
| CTAGCTGTTCAGGCCCTCTT+TGG | + | chr1.4:24136464-24136483 | MS.gene88630:CDS | 55.0% | |
| GCAATTCCTGGTCCACGAGT+GGG | + | chr1.4:24132885-24132904 | MS.gene88630:CDS | 55.0% | |
| GTGGAGTGATTAGGAGGGAG+AGG | + | chr1.4:24135478-24135497 | MS.gene88630:intron | 55.0% | |
| TGCCACCTTGCCAAAGTCCA+AGG | + | chr1.4:24135609-24135628 | MS.gene88630:intron | 55.0% | |
| TGGATTCTCGCTGTTCCGCT+TGG | + | chr1.4:24132924-24132943 | MS.gene88630:CDS | 55.0% | |
| ! | AGCGGAGCGTTTGGAGAAAG+CGG | + | chr1.4:24137085-24137104 | MS.gene88630:CDS | 55.0% |
| ! | TGCGGGAGCTTTAGTACACC+GGG | + | chr1.4:24133575-24133594 | MS.gene88630:intron | 55.0% |
| !! | TGGAAGACGTGTTCGGTGTC+AGG | + | chr1.4:24133095-24133114 | MS.gene88630:intron | 55.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr1.4:24133426-24133445 | MS.gene88630:intron | 60.0% | |
| AGTGGGCGCTATTGGTGGAG+CGG | + | chr1.4:24137112-24137131 | MS.gene88630:CDS | 60.0% | |
| CATACGCAGGGTCTGGGAAG+GGG | - | chr1.4:24133557-24133576 | None:intergenic | 60.0% | |
| CTTCCCAGACCCTGCGTATG+CGG | + | chr1.4:24133557-24133576 | MS.gene88630:intron | 60.0% | |
| GCATACGCAGGGTCTGGGAA+GGG | - | chr1.4:24133558-24133577 | None:intergenic | 60.0% | |
| GGTGAAGTGGGCGCTATTGG+TGG | + | chr1.4:24137107-24137126 | MS.gene88630:CDS | 60.0% | |
| TGGGTCCCACTTCATTGCCG+TGG | + | chr1.4:24132904-24132923 | MS.gene88630:CDS | 60.0% | |
| TTCCCAGACCCTGCGTATGC+GGG | + | chr1.4:24133558-24133577 | MS.gene88630:intron | 60.0% | |
| ! | CCGCTACAAAGCGGAGCGTT+TGG | + | chr1.4:24137076-24137095 | MS.gene88630:CDS | 60.0% |
| ! | GCGGAGCGTTTGGAGAAAGC+GGG | + | chr1.4:24137086-24137105 | MS.gene88630:CDS | 60.0% |
| CGCATACGCAGGGTCTGGGA+AGG | - | chr1.4:24133559-24133578 | None:intergenic | 65.0% | |
| CGCTATTGGTGGAGCGGAGC+GGG | + | chr1.4:24137118-24137137 | MS.gene88630:CDS | 65.0% | |
| CTCCCGCATACGCAGGGTCT+GGG | - | chr1.4:24133563-24133582 | None:intergenic | 65.0% | |
| GAGCGGAGCGGGTCAATAGC+AGG | + | chr1.4:24137129-24137148 | MS.gene88630:CDS | 65.0% | |
| GCGCTATTGGTGGAGCGGAG+CGG | + | chr1.4:24137117-24137136 | MS.gene88630:CDS | 65.0% | |
| GCGGGTGAAGTGGGCGCTAT+TGG | + | chr1.4:24137104-24137123 | MS.gene88630:CDS | 65.0% | |
| TGGGAAGGGGTCCCCCCATT+TGG | - | chr1.4:24133544-24133563 | None:intergenic | 65.0% | |
| !! | GGTTGGCTTGGTGGTTGGGG+TGG | + | chr1.4:24135443-24135462 | MS.gene88630:intron | 65.0% |
| !! | TGGCTTGGTGGTTGGGGTGG+AGG | + | chr1.4:24135446-24135465 | MS.gene88630:intron | 65.0% |
| GCCACTCCGCGCTGCGATAG+CGG | - | chr1.4:24137033-24137052 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+TGG | - | chr1.4:24133564-24133583 | None:intergenic | 70.0% | |
| GTGGGACCCACTCGTGGACC+AGG | - | chr1.4:24132894-24132913 | None:intergenic | 70.0% | |
| TAGCGGCCGCTATCGCAGCG+CGG | + | chr1.4:24137024-24137043 | MS.gene88630:intron | 70.0% | |
| GCCGCTATCGCAGCGCGGAG+TGG | + | chr1.4:24137029-24137048 | MS.gene88630:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 24132567 | 24137182 | 24132567 | ID=MS.gene88630 |
| chr1.4 | mRNA | 24132567 | 24137182 | 24132567 | ID=MS.gene88630.t1;Parent=MS.gene88630 |
| chr1.4 | exon | 24132567 | 24133028 | 24132567 | ID=MS.gene88630.t1.exon1;Parent=MS.gene88630.t1 |
| chr1.4 | CDS | 24132567 | 24133028 | 24132567 | ID=cds.MS.gene88630.t1;Parent=MS.gene88630.t1 |
| chr1.4 | exon | 24133277 | 24133375 | 24133277 | ID=MS.gene88630.t1.exon2;Parent=MS.gene88630.t1 |
| chr1.4 | CDS | 24133277 | 24133375 | 24133277 | ID=cds.MS.gene88630.t1;Parent=MS.gene88630.t1 |
| chr1.4 | exon | 24134383 | 24134560 | 24134383 | ID=MS.gene88630.t1.exon3;Parent=MS.gene88630.t1 |
| chr1.4 | CDS | 24134383 | 24134560 | 24134383 | ID=cds.MS.gene88630.t1;Parent=MS.gene88630.t1 |
| chr1.4 | exon | 24136411 | 24136508 | 24136411 | ID=MS.gene88630.t1.exon4;Parent=MS.gene88630.t1 |
| chr1.4 | CDS | 24136411 | 24136508 | 24136411 | ID=cds.MS.gene88630.t1;Parent=MS.gene88630.t1 |
| chr1.4 | exon | 24137027 | 24137182 | 24137027 | ID=MS.gene88630.t1.exon5;Parent=MS.gene88630.t1 |
| chr1.4 | CDS | 24137027 | 24137182 | 24137027 | ID=cds.MS.gene88630.t1;Parent=MS.gene88630.t1 |
| Gene Sequence |
| Protein sequence |
