Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89254.t1 | XP_003623196.1 | 94.6 | 224 | 12 | 0 | 1 | 224 | 1 | 224 | 2.50E-117 | 431.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89254.t1 | P32110 | 71.6 | 225 | 63 | 1 | 1 | 224 | 1 | 225 | 9.5e-89 | 327.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89254.t1 | G7L6H0 | 94.6 | 224 | 12 | 0 | 1 | 224 | 1 | 224 | 1.8e-117 | 431.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051154 | MS.gene89254 | 0.823091 | 1.67E-53 | -1.69E-46 |
| MS.gene053094 | MS.gene89254 | 0.824203 | 9.17E-54 | -1.69E-46 |
| MS.gene053963 | MS.gene89254 | 0.854615 | 1.09E-61 | -1.69E-46 |
| MS.gene054222 | MS.gene89254 | 0.811145 | 8.10E-51 | -1.69E-46 |
| MS.gene05469 | MS.gene89254 | 0.808211 | 3.46E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene89254 | 0.850053 | 2.18E-60 | -1.69E-46 |
| MS.gene054893 | MS.gene89254 | 0.850337 | 1.81E-60 | -1.69E-46 |
| MS.gene055147 | MS.gene89254 | 0.967799 | 8.89E-128 | -1.69E-46 |
| MS.gene055148 | MS.gene89254 | 0.97189 | 7.00E-134 | -1.69E-46 |
| MS.gene055149 | MS.gene89254 | 0.873629 | 1.27E-67 | -1.69E-46 |
| MS.gene055150 | MS.gene89254 | 0.831632 | 1.50E-55 | -1.69E-46 |
| MS.gene055226 | MS.gene89254 | 0.83862 | 2.58E-57 | -1.69E-46 |
| MS.gene056986 | MS.gene89254 | 0.804615 | 1.98E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene89254 | 0.807309 | 5.38E-50 | -1.69E-46 |
| MS.gene058592 | MS.gene89254 | 0.81458 | 1.43E-51 | -1.69E-46 |
| MS.gene05878 | MS.gene89254 | 0.803574 | 3.27E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene89254 | 0.818766 | 1.65E-52 | -1.69E-46 |
| MS.gene060412 | MS.gene89254 | 0.827402 | 1.60E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89254.t1 | MTR_7g065600 | 94.643 | 224 | 12 | 0 | 1 | 224 | 1 | 224 | 9.34e-159 | 438 |
| MS.gene89254.t1 | MTR_7g065590 | 79.911 | 224 | 45 | 0 | 1 | 224 | 1 | 224 | 2.69e-135 | 379 |
| MS.gene89254.t1 | MTR_7g065290 | 77.232 | 224 | 51 | 0 | 1 | 224 | 1 | 224 | 4.64e-130 | 365 |
| MS.gene89254.t1 | MTR_7g065265 | 74.107 | 224 | 58 | 0 | 1 | 224 | 1 | 224 | 1.03e-123 | 350 |
| MS.gene89254.t1 | MTR_7g065230 | 75.893 | 224 | 49 | 1 | 1 | 224 | 1 | 219 | 2.21e-123 | 348 |
| MS.gene89254.t1 | MTR_7g065270 | 72.768 | 224 | 61 | 0 | 1 | 224 | 1 | 224 | 1.95e-121 | 344 |
| MS.gene89254.t1 | MTR_7g065260 | 76.444 | 225 | 52 | 1 | 1 | 224 | 8 | 232 | 2.99e-116 | 331 |
| MS.gene89254.t1 | MTR_7g065720 | 69.333 | 225 | 68 | 1 | 1 | 224 | 1 | 225 | 1.08e-114 | 327 |
| MS.gene89254.t1 | MTR_7g065660 | 67.713 | 223 | 72 | 0 | 1 | 223 | 1 | 223 | 4.53e-113 | 323 |
| MS.gene89254.t1 | MTR_7g065740 | 62.946 | 224 | 82 | 1 | 1 | 223 | 1 | 224 | 3.47e-107 | 308 |
| MS.gene89254.t1 | MTR_7g065630 | 66.816 | 223 | 70 | 1 | 1 | 223 | 19 | 237 | 4.17e-107 | 308 |
| MS.gene89254.t1 | MTR_7g065750 | 63.839 | 224 | 80 | 1 | 1 | 223 | 1 | 224 | 2.91e-104 | 300 |
| MS.gene89254.t1 | MTR_4g019790 | 60.987 | 223 | 87 | 0 | 1 | 223 | 1 | 223 | 8.47e-103 | 296 |
| MS.gene89254.t1 | MTR_7g065640 | 61.883 | 223 | 67 | 1 | 1 | 223 | 1 | 205 | 4.31e-99 | 286 |
| MS.gene89254.t1 | MTR_7g065710 | 64.734 | 207 | 69 | 1 | 8 | 214 | 5 | 207 | 5.64e-96 | 279 |
| MS.gene89254.t1 | MTR_4g019780 | 62.150 | 214 | 79 | 2 | 3 | 215 | 4 | 216 | 1.25e-93 | 273 |
| MS.gene89254.t1 | MTR_7g065680 | 65.766 | 222 | 72 | 1 | 1 | 222 | 1 | 218 | 7.77e-93 | 271 |
| MS.gene89254.t1 | MTR_7g065700 | 64.019 | 214 | 73 | 1 | 1 | 214 | 1 | 210 | 1.28e-87 | 258 |
| MS.gene89254.t1 | MTR_1g090150 | 44.796 | 221 | 117 | 2 | 5 | 222 | 1 | 219 | 5.55e-65 | 201 |
| MS.gene89254.t1 | MTR_6g080440 | 47.826 | 207 | 106 | 2 | 8 | 213 | 4 | 209 | 1.15e-63 | 197 |
| MS.gene89254.t1 | MTR_8g087425 | 46.789 | 218 | 114 | 2 | 4 | 220 | 2 | 218 | 1.64e-63 | 197 |
| MS.gene89254.t1 | MTR_3g099757 | 48.636 | 220 | 111 | 2 | 5 | 223 | 3 | 221 | 2.76e-62 | 194 |
| MS.gene89254.t1 | MTR_8g087410 | 45.161 | 217 | 116 | 3 | 1 | 216 | 1 | 215 | 3.17e-58 | 184 |
| MS.gene89254.t1 | MTR_1g115195 | 45.070 | 213 | 114 | 2 | 7 | 216 | 3 | 215 | 4.34e-58 | 183 |
| MS.gene89254.t1 | MTR_5g040430 | 41.892 | 222 | 121 | 3 | 1 | 215 | 1 | 221 | 1.32e-57 | 182 |
| MS.gene89254.t1 | MTR_1g090070 | 42.793 | 222 | 118 | 4 | 8 | 223 | 10 | 228 | 9.84e-57 | 180 |
| MS.gene89254.t1 | MTR_1g090100 | 42.986 | 221 | 120 | 4 | 7 | 223 | 2 | 220 | 9.29e-55 | 174 |
| MS.gene89254.t1 | MTR_1g090060 | 42.081 | 221 | 122 | 4 | 8 | 224 | 4 | 222 | 7.39e-54 | 172 |
| MS.gene89254.t1 | MTR_5g037380 | 43.182 | 220 | 115 | 3 | 1 | 212 | 1 | 218 | 8.91e-54 | 172 |
| MS.gene89254.t1 | MTR_4g059730 | 39.906 | 213 | 124 | 2 | 6 | 215 | 3 | 214 | 8.45e-52 | 167 |
| MS.gene89254.t1 | MTR_8g061950 | 42.922 | 219 | 117 | 3 | 5 | 215 | 3 | 221 | 3.64e-51 | 166 |
| MS.gene89254.t1 | MTR_1g090090 | 41.627 | 209 | 116 | 4 | 8 | 212 | 4 | 210 | 1.43e-50 | 164 |
| MS.gene89254.t1 | MTR_2g070200 | 40.196 | 204 | 118 | 3 | 6 | 207 | 3 | 204 | 1.04e-43 | 146 |
| MS.gene89254.t1 | MTR_2g070150 | 38.235 | 204 | 121 | 4 | 6 | 207 | 3 | 203 | 3.94e-42 | 142 |
| MS.gene89254.t1 | MTR_3g467420 | 42.000 | 200 | 111 | 4 | 7 | 204 | 9 | 205 | 4.20e-42 | 142 |
| MS.gene89254.t1 | MTR_2g070130 | 37.864 | 206 | 123 | 4 | 6 | 209 | 3 | 205 | 6.73e-41 | 139 |
| MS.gene89254.t1 | MTR_2g070180 | 37.745 | 204 | 122 | 4 | 6 | 207 | 3 | 203 | 1.26e-40 | 138 |
| MS.gene89254.t1 | MTR_2g070140 | 37.629 | 194 | 116 | 4 | 21 | 212 | 2 | 192 | 5.80e-40 | 136 |
| MS.gene89254.t1 | MTR_4g124130 | 43.229 | 192 | 99 | 6 | 5 | 191 | 2 | 188 | 1.27e-39 | 136 |
| MS.gene89254.t1 | MTR_3g467430 | 39.901 | 203 | 117 | 4 | 4 | 204 | 6 | 205 | 1.46e-38 | 133 |
| MS.gene89254.t1 | MTR_8g056940 | 42.458 | 179 | 98 | 4 | 16 | 192 | 13 | 188 | 3.22e-38 | 132 |
| MS.gene89254.t1 | MTR_5g076900 | 38.164 | 207 | 123 | 4 | 3 | 207 | 2 | 205 | 3.66e-38 | 132 |
| MS.gene89254.t1 | MTR_2g070210 | 37.915 | 211 | 124 | 5 | 6 | 212 | 3 | 210 | 3.95e-38 | 132 |
| MS.gene89254.t1 | MTR_2g070120 | 37.864 | 206 | 123 | 4 | 6 | 209 | 3 | 205 | 1.11e-37 | 131 |
| MS.gene89254.t1 | MTR_2g070070 | 38.693 | 199 | 117 | 4 | 8 | 204 | 5 | 200 | 8.97e-36 | 126 |
| MS.gene89254.t1 | MTR_2g070060 | 36.634 | 202 | 123 | 4 | 8 | 207 | 5 | 203 | 3.78e-35 | 124 |
| MS.gene89254.t1 | MTR_2g070110 | 37.186 | 199 | 119 | 4 | 16 | 212 | 13 | 207 | 1.71e-30 | 112 |
| MS.gene89254.t1 | MTR_0186s0030 | 45.385 | 130 | 69 | 2 | 16 | 144 | 13 | 141 | 3.19e-30 | 109 |
| MS.gene89254.t1 | MTR_2g072120 | 44.615 | 65 | 35 | 1 | 51 | 114 | 2 | 66 | 3.71e-15 | 68.2 |
| MS.gene89254.t1 | MTR_4g134370 | 28.571 | 210 | 126 | 8 | 10 | 204 | 18 | 218 | 5.43e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89254.t1 | AT3G09270 | 50.893 | 224 | 106 | 4 | 3 | 223 | 2 | 224 | 3.07e-76 | 229 |
| MS.gene89254.t1 | AT2G29420 | 48.402 | 219 | 111 | 2 | 3 | 220 | 5 | 222 | 3.93e-72 | 219 |
| MS.gene89254.t1 | AT2G29490 | 47.847 | 209 | 106 | 3 | 1 | 207 | 1 | 208 | 4.21e-60 | 188 |
| MS.gene89254.t1 | AT2G29450 | 43.498 | 223 | 124 | 2 | 3 | 223 | 2 | 224 | 9.99e-57 | 180 |
| MS.gene89254.t1 | AT2G29460 | 43.694 | 222 | 122 | 3 | 1 | 220 | 1 | 221 | 2.09e-55 | 176 |
| MS.gene89254.t1 | AT2G29480 | 44.498 | 209 | 113 | 3 | 1 | 207 | 1 | 208 | 2.95e-54 | 173 |
| MS.gene89254.t1 | AT1G10370 | 43.439 | 221 | 116 | 3 | 1 | 214 | 1 | 219 | 5.61e-53 | 170 |
| MS.gene89254.t1 | AT2G29440 | 41.778 | 225 | 127 | 4 | 1 | 223 | 1 | 223 | 1.47e-52 | 169 |
| MS.gene89254.t1 | AT2G29470 | 43.810 | 210 | 114 | 4 | 1 | 207 | 1 | 209 | 1.74e-52 | 169 |
| MS.gene89254.t1 | AT1G69930 | 38.839 | 224 | 131 | 2 | 2 | 219 | 7 | 230 | 1.21e-51 | 167 |
| MS.gene89254.t1 | AT1G10360 | 41.262 | 206 | 114 | 2 | 6 | 204 | 4 | 209 | 4.40e-50 | 163 |
| MS.gene89254.t1 | AT1G27130 | 40.000 | 225 | 126 | 4 | 1 | 217 | 1 | 224 | 5.26e-49 | 160 |
| MS.gene89254.t1 | AT1G59700 | 44.037 | 218 | 114 | 3 | 5 | 214 | 4 | 221 | 7.73e-49 | 160 |
| MS.gene89254.t1 | AT1G59670 | 43.269 | 208 | 110 | 3 | 5 | 204 | 4 | 211 | 1.24e-48 | 159 |
| MS.gene89254.t1 | AT5G62480 | 39.367 | 221 | 123 | 4 | 5 | 215 | 6 | 225 | 8.21e-46 | 152 |
| MS.gene89254.t1 | AT1G27140 | 38.767 | 227 | 129 | 4 | 1 | 218 | 1 | 226 | 1.07e-44 | 149 |
| MS.gene89254.t1 | AT1G17170 | 40.826 | 218 | 121 | 5 | 6 | 220 | 3 | 215 | 6.72e-44 | 147 |
| MS.gene89254.t1 | AT1G78320 | 40.865 | 208 | 118 | 4 | 5 | 210 | 2 | 206 | 7.42e-44 | 147 |
| MS.gene89254.t1 | AT1G78370 | 41.206 | 199 | 112 | 4 | 16 | 212 | 13 | 208 | 1.82e-43 | 145 |
| MS.gene89254.t1 | AT1G78380 | 41.063 | 207 | 117 | 4 | 8 | 212 | 5 | 208 | 3.17e-43 | 145 |
| MS.gene89254.t1 | AT1G69920 | 37.445 | 227 | 132 | 4 | 1 | 217 | 26 | 252 | 1.83e-42 | 144 |
| MS.gene89254.t1 | AT1G78340 | 41.148 | 209 | 118 | 4 | 6 | 212 | 3 | 208 | 2.45e-42 | 143 |
| MS.gene89254.t1 | AT1G74590 | 34.361 | 227 | 142 | 3 | 1 | 221 | 1 | 226 | 2.58e-42 | 143 |
| MS.gene89254.t1 | AT1G53680 | 38.571 | 210 | 124 | 4 | 1 | 207 | 1 | 208 | 1.91e-40 | 138 |
| MS.gene89254.t1 | AT1G17180 | 37.799 | 209 | 125 | 4 | 6 | 212 | 3 | 208 | 2.69e-39 | 135 |
| MS.gene89254.t1 | AT1G78360 | 39.904 | 208 | 119 | 5 | 8 | 212 | 5 | 209 | 2.40e-38 | 132 |
| MS.gene89254.t1 | AT1G17190 | 38.785 | 214 | 124 | 5 | 1 | 212 | 1 | 209 | 4.89e-38 | 132 |
| MS.gene89254.t1 | AT3G43800 | 35.749 | 207 | 124 | 6 | 4 | 204 | 2 | 205 | 2.58e-35 | 125 |
| MS.gene89254.t1 | AT5G62480 | 31.364 | 220 | 116 | 4 | 5 | 215 | 6 | 199 | 3.68e-28 | 106 |
| MS.gene89254.t1 | AT5G62480 | 31.364 | 220 | 115 | 4 | 5 | 215 | 6 | 198 | 7.48e-28 | 105 |
| MS.gene89254.t1 | AT1G78320 | 33.816 | 207 | 107 | 4 | 5 | 210 | 2 | 179 | 2.74e-27 | 103 |
| MS.gene89254.t1 | AT2G02380 | 29.302 | 215 | 133 | 6 | 5 | 207 | 9 | 216 | 3.56e-17 | 77.4 |
| MS.gene89254.t1 | AT2G02390 | 29.817 | 218 | 132 | 7 | 3 | 207 | 4 | 213 | 1.18e-16 | 76.3 |
| MS.gene89254.t1 | AT2G02390 | 28.889 | 225 | 132 | 8 | 3 | 207 | 4 | 220 | 2.64e-14 | 69.7 |
| MS.gene89254.t1 | AT2G02390 | 41.237 | 97 | 53 | 2 | 3 | 96 | 4 | 99 | 8.78e-14 | 67.8 |
Find 48 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGCCTTGGCTCGTTTC+TGG | 0.120947 | 7.1:+36956387 | MS.gene89254:CDS |
| CAGGAAAATGTGAAGCTTTA+TGG | 0.125337 | 7.1:+36956122 | MS.gene89254:CDS |
| GAGCTTAAGGATAATTTCTT+TGG | 0.282538 | 7.1:+36957433 | MS.gene89254:CDS |
| TAAGGATCAGAAGGCAATAT+TGG | 0.299422 | 7.1:-36956362 | None:intergenic |
| ACAGGAACCTTCTTGTAAAC+AGG | 0.304362 | 7.1:-36956263 | None:intergenic |
| GCCTCCTAGAGAAGGACTTT+TGG | 0.337294 | 7.1:+36957621 | MS.gene89254:CDS |
| AATTCTTGAGAATGAGCTTA+AGG | 0.354197 | 7.1:+36957420 | MS.gene89254:CDS |
| TTCTTTGGTGGAGAGGAGAT+TGG | 0.368042 | 7.1:+36957448 | MS.gene89254:CDS |
| GGCAATTTATCCTTAACAAC+TGG | 0.375316 | 7.1:-36957601 | None:intergenic |
| TTGACTCCATTTGTAAAGCT+TGG | 0.384299 | 7.1:-36957563 | None:intergenic |
| CACCAACCATCCAGTTGTTA+AGG | 0.388600 | 7.1:+36957591 | MS.gene89254:CDS |
| TGACTCCATTTGTAAAGCTT+GGG | 0.390868 | 7.1:-36957562 | None:intergenic |
| CACTAAGATGGCATCAAATC+AGG | 0.391111 | 7.1:+36956103 | None:intergenic |
| TTTGTTGCTTCTTGTACAAT+GGG | 0.408906 | 7.1:-36957511 | None:intergenic |
| TACAAATATGAGTTAGAAAA+GGG | 0.419037 | 7.1:+36956206 | MS.gene89254:CDS |
| GTTTGTTGCTTCTTGTACAA+TGG | 0.430175 | 7.1:-36957512 | None:intergenic |
| ATCACAAGGGATTCTGATAT+AGG | 0.433145 | 7.1:-36956305 | None:intergenic |
| GACCAAGTTCATAGATGATA+AGG | 0.434027 | 7.1:+36956409 | MS.gene89254:CDS |
| ATCTCCACCCTGCTCACAAA+TGG | 0.436953 | 7.1:-36956158 | None:intergenic |
| ATACAAATATGAGTTAGAAA+AGG | 0.446746 | 7.1:+36956205 | MS.gene89254:CDS |
| CTTAAGGATAATTTCTTTGG+TGG | 0.454634 | 7.1:+36957436 | MS.gene89254:CDS |
| GGAGATTGCTCTAACATTGA+AGG | 0.460355 | 7.1:+36956175 | MS.gene89254:CDS |
| AATTTCCCAAGCTTTACAAA+TGG | 0.474830 | 7.1:+36957557 | MS.gene89254:CDS |
| TACCTTATCATCTATGAACT+TGG | 0.479710 | 7.1:-36956411 | None:intergenic |
| ATCCTTAACAACTGGATGGT+TGG | 0.488666 | 7.1:-36957593 | None:intergenic |
| TTATCATTATGAACTAATAC+AGG | 0.517988 | 7.1:-36956281 | None:intergenic |
| GGATAATTTCTTTGGTGGAG+AGG | 0.526031 | 7.1:+36957441 | MS.gene89254:CDS |
| TGTGAAGCTTTATGGAATGA+TGG | 0.547157 | 7.1:+36956130 | MS.gene89254:CDS |
| GATAAATTGCCTCCTAGAGA+AGG | 0.547220 | 7.1:+36957613 | MS.gene89254:CDS |
| TGATCCTTACAAAAGAGCCT+TGG | 0.548089 | 7.1:+36956376 | MS.gene89254:CDS |
| TGGCAAGTCCATTTGTGAGC+AGG | 0.549506 | 7.1:+36956150 | MS.gene89254:CDS |
| TTGAGTATGTCGATGAGACC+TGG | 0.549849 | 7.1:+36956330 | MS.gene89254:CDS |
| TAAGCCAAAAGTCCTTCTCT+AGG | 0.550201 | 7.1:-36957625 | None:intergenic |
| CAGGAACCTTCTTGTAAACA+GGG | 0.551890 | 7.1:-36956262 | None:intergenic |
| AGAACGTGAGAAAGCTATTG+AGG | 0.557970 | 7.1:+36957378 | MS.gene89254:CDS |
| ATTTATCCTTAACAACTGGA+TGG | 0.561475 | 7.1:-36957597 | None:intergenic |
| AATATGAGTTAGAAAAGGGA+GGG | 0.564400 | 7.1:+36956210 | MS.gene89254:CDS |
| ATACAACCCTGTTTACAAGA+AGG | 0.566628 | 7.1:+36956256 | MS.gene89254:CDS |
| GGCAAGTCCATTTGTGAGCA+GGG | 0.574715 | 7.1:+36956151 | MS.gene89254:CDS |
| AAATATGAGTTAGAAAAGGG+AGG | 0.578650 | 7.1:+36956209 | MS.gene89254:CDS |
| GAGATTGCTCTAACATTGAA+GGG | 0.597295 | 7.1:+36956176 | MS.gene89254:CDS |
| CGACATACTCAAGAATCACA+AGG | 0.607291 | 7.1:-36956319 | None:intergenic |
| GCCAAAAGTCCTTCTCTAGG+AGG | 0.619286 | 7.1:-36957622 | None:intergenic |
| ACCAGTGTTTAAGTGCTGCA+CGG | 0.628510 | 7.1:+36957329 | MS.gene89254:intron |
| CTTGGTCCAGAAACGAGCCA+AGG | 0.682377 | 7.1:-36956393 | None:intergenic |
| TTGTTGCTTCTTGTACAATG+GGG | 0.684989 | 7.1:-36957510 | None:intergenic |
| GACATACTCAAGAATCACAA+GGG | 0.702786 | 7.1:-36956318 | None:intergenic |
| AAGTCCATTTGTGAGCAGGG+TGG | 0.747804 | 7.1:+36956154 | MS.gene89254:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTTTTCTTTTTAAAATTA+CGG | - | chr7.1:36956964-36956983 | None:intergenic | 10.0% |
| !!! | TAGTTTTCATTTTTAAATTA+CGG | + | chr7.1:36956835-36956854 | MS.gene89254:intron | 10.0% |
| !! | AATAAATATGATATTTGAAG+CGG | - | chr7.1:36957068-36957087 | None:intergenic | 15.0% |
| !! | AATATTTAAGAAGAATAATC+TGG | + | chr7.1:36957195-36957214 | MS.gene89254:intron | 15.0% |
| !! | ATACAAATATGAGTTAGAAA+AGG | + | chr7.1:36956205-36956224 | MS.gene89254:CDS | 20.0% |
| !! | TACAAATATGAGTTAGAAAA+GGG | + | chr7.1:36956206-36956225 | MS.gene89254:CDS | 20.0% |
| !! | TTATCATTATGAACTAATAC+AGG | - | chr7.1:36956284-36956303 | None:intergenic | 20.0% |
| !!! | ACACTGGTTTTAAAAAATTA+AGG | - | chr7.1:36957317-36957336 | None:intergenic | 20.0% |
| !!! | CACTTTTAAAGTGTATAAAT+GGG | + | chr7.1:36956510-36956529 | MS.gene89254:intron | 20.0% |
| !!! | TCACTTTTAAAGTGTATAAA+TGG | + | chr7.1:36956509-36956528 | MS.gene89254:intron | 20.0% |
| ! | ATAGAGAAAAACAATACATG+TGG | + | chr7.1:36956722-36956741 | MS.gene89254:intron | 25.0% |
| ! | ATGACTATTATATATGCATG+TGG | + | chr7.1:36957106-36957125 | MS.gene89254:intron | 25.0% |
| ! | TAAAATATTTCACAAGCATG+TGG | + | chr7.1:36956644-36956663 | MS.gene89254:intron | 25.0% |
| ! | TTATTCAACAAAACGAGTAA+CGG | + | chr7.1:36957083-36957102 | MS.gene89254:intron | 25.0% |
| !! | TGAAATATAATGACTTGTGA+CGG | - | chr7.1:36957155-36957174 | None:intergenic | 25.0% |
| !!! | ATGTATTGTTTTTCTCTATG+CGG | - | chr7.1:36956721-36956740 | None:intergenic | 25.0% |
| AAATATGAGTTAGAAAAGGG+AGG | + | chr7.1:36956209-36956228 | MS.gene89254:CDS | 30.0% | |
| AATATGAGTTAGAAAAGGGA+GGG | + | chr7.1:36956210-36956229 | MS.gene89254:CDS | 30.0% | |
| AATTCTTGAGAATGAGCTTA+AGG | + | chr7.1:36957420-36957439 | MS.gene89254:CDS | 30.0% | |
| AATTTCCCAAGCTTTACAAA+TGG | + | chr7.1:36957557-36957576 | MS.gene89254:CDS | 30.0% | |
| ATTTATCCTTAACAACTGGA+TGG | - | chr7.1:36957600-36957619 | None:intergenic | 30.0% | |
| CTTAAGGATAATTTCTTTGG+TGG | + | chr7.1:36957436-36957455 | MS.gene89254:CDS | 30.0% | |
| GAGCTTAAGGATAATTTCTT+TGG | + | chr7.1:36957433-36957452 | MS.gene89254:CDS | 30.0% | |
| TACCTTATCATCTATGAACT+TGG | - | chr7.1:36956414-36956433 | None:intergenic | 30.0% | |
| TGTATATTATATGCAGGGAT+CGG | - | chr7.1:36956554-36956573 | None:intergenic | 30.0% | |
| ! | TTTGTTGCTTCTTGTACAAT+GGG | - | chr7.1:36957514-36957533 | None:intergenic | 30.0% |
| !! | CAATATTGGATTTTGTTTCC+AGG | - | chr7.1:36956351-36956370 | None:intergenic | 30.0% |
| AAATACCACAAACTTCACTG+AGG | + | chr7.1:36956767-36956786 | MS.gene89254:intron | 35.0% | |
| AATACCACAAACTTCACTGA+GGG | + | chr7.1:36956768-36956787 | MS.gene89254:intron | 35.0% | |
| ATACAACCCTGTTTACAAGA+AGG | + | chr7.1:36956256-36956275 | MS.gene89254:CDS | 35.0% | |
| ATACGCTAGAGAGACATTTA+GGG | - | chr7.1:36957031-36957050 | None:intergenic | 35.0% | |
| ATATTTCACAAGCATGTGGA+TGG | + | chr7.1:36956648-36956667 | MS.gene89254:intron | 35.0% | |
| ATCACAAGGGATTCTGATAT+AGG | - | chr7.1:36956308-36956327 | None:intergenic | 35.0% | |
| CAGGAAAATGTGAAGCTTTA+TGG | + | chr7.1:36956122-36956141 | MS.gene89254:CDS | 35.0% | |
| GAATTACGTTCATGTGTTCT+CGG | - | chr7.1:36956595-36956614 | None:intergenic | 35.0% | |
| GACATACTCAAGAATCACAA+GGG | - | chr7.1:36956321-36956340 | None:intergenic | 35.0% | |
| GACCAAGTTCATAGATGATA+AGG | + | chr7.1:36956409-36956428 | MS.gene89254:CDS | 35.0% | |
| GACGCTGTATATTATATGCA+GGG | - | chr7.1:36956559-36956578 | None:intergenic | 35.0% | |
| GAGATTGCTCTAACATTGAA+GGG | + | chr7.1:36956176-36956195 | MS.gene89254:CDS | 35.0% | |
| GGCAATTTATCCTTAACAAC+TGG | - | chr7.1:36957604-36957623 | None:intergenic | 35.0% | |
| TAAGGATCAGAAGGCAATAT+TGG | - | chr7.1:36956365-36956384 | None:intergenic | 35.0% | |
| TATACGCTAGAGAGACATTT+AGG | - | chr7.1:36957032-36957051 | None:intergenic | 35.0% | |
| TGACTCCATTTGTAAAGCTT+GGG | - | chr7.1:36957565-36957584 | None:intergenic | 35.0% | |
| TTGACTCCATTTGTAAAGCT+TGG | - | chr7.1:36957566-36957585 | None:intergenic | 35.0% | |
| ! | GTTTGTTGCTTCTTGTACAA+TGG | - | chr7.1:36957515-36957534 | None:intergenic | 35.0% |
| ! | TGTGAAGCTTTATGGAATGA+TGG | + | chr7.1:36956130-36956149 | MS.gene89254:CDS | 35.0% |
| ! | TTGTTGCTTCTTGTACAATG+GGG | - | chr7.1:36957513-36957532 | None:intergenic | 35.0% |
| !! | TATAATGACTTGTGACGGAT+TGG | - | chr7.1:36957150-36957169 | None:intergenic | 35.0% |
| ACAGGAACCTTCTTGTAAAC+AGG | - | chr7.1:36956266-36956285 | None:intergenic | 40.0% | |
| AGAACGTGAGAAAGCTATTG+AGG | + | chr7.1:36957378-36957397 | MS.gene89254:CDS | 40.0% | |
| ATCCTTAACAACTGGATGGT+TGG | - | chr7.1:36957596-36957615 | None:intergenic | 40.0% | |
| CAGGAACCTTCTTGTAAACA+GGG | - | chr7.1:36956265-36956284 | None:intergenic | 40.0% | |
| CGACATACTCAAGAATCACA+AGG | - | chr7.1:36956322-36956341 | None:intergenic | 40.0% | |
| GATAAATTGCCTCCTAGAGA+AGG | + | chr7.1:36957613-36957632 | MS.gene89254:CDS | 40.0% | |
| GGACGCTGTATATTATATGC+AGG | - | chr7.1:36956560-36956579 | None:intergenic | 40.0% | |
| GGAGATTGCTCTAACATTGA+AGG | + | chr7.1:36956175-36956194 | MS.gene89254:CDS | 40.0% | |
| GGATAATTTCTTTGGTGGAG+AGG | + | chr7.1:36957441-36957460 | MS.gene89254:CDS | 40.0% | |
| TAAGCCAAAAGTCCTTCTCT+AGG | - | chr7.1:36957628-36957647 | None:intergenic | 40.0% | |
| TGATCCTTACAAAAGAGCCT+TGG | + | chr7.1:36956376-36956395 | MS.gene89254:CDS | 40.0% | |
| TGTGTTTGGATGGAAGGTTT+AGG | + | chr7.1:36956791-36956810 | MS.gene89254:intron | 40.0% | |
| ! | ATTTGAAGCGGTTCTCAATG+TGG | - | chr7.1:36957056-36957075 | None:intergenic | 40.0% |
| ! | CTGCAGTCTTCATAGCTTTT+TGG | + | chr7.1:36957485-36957504 | MS.gene89254:CDS | 40.0% |
| ! | GCTCTTTTGTAAGGATCAGA+AGG | - | chr7.1:36956374-36956393 | None:intergenic | 40.0% |
| ! | TCTTTATTTGTGCGCATGTG+TGG | + | chr7.1:36956620-36956639 | MS.gene89254:intron | 40.0% |
| ATGGAAGGTTTAGGAGTGGA+AGG | + | chr7.1:36956800-36956819 | MS.gene89254:intron | 45.0% | |
| CACCAACCATCCAGTTGTTA+AGG | + | chr7.1:36957591-36957610 | MS.gene89254:CDS | 45.0% | |
| CTTGGATTGAGGGTTTAGGA+GGG | - | chr7.1:36957004-36957023 | None:intergenic | 45.0% | |
| TCATGTGTTCTCGGTTCAGT+TGG | - | chr7.1:36956586-36956605 | None:intergenic | 45.0% | |
| TGGAAGGTTTAGGAGTGGAA+GGG | + | chr7.1:36956801-36956820 | MS.gene89254:intron | 45.0% | |
| TGTGCTTGGATTGAGGGTTT+AGG | - | chr7.1:36957008-36957027 | None:intergenic | 45.0% | |
| TTAGGGTGTGCTTGGATTGA+GGG | - | chr7.1:36957014-36957033 | None:intergenic | 45.0% | |
| TTCTTTGGTGGAGAGGAGAT+TGG | + | chr7.1:36957448-36957467 | MS.gene89254:CDS | 45.0% | |
| TTGAGTATGTCGATGAGACC+TGG | + | chr7.1:36956330-36956349 | MS.gene89254:CDS | 45.0% | |
| TTGGATGGAAGGTTTAGGAG+TGG | + | chr7.1:36956796-36956815 | MS.gene89254:intron | 45.0% | |
| TTGGATTGAGGGTTTAGGAG+GGG | - | chr7.1:36957003-36957022 | None:intergenic | 45.0% | |
| ! | AACTTCACTGAGGGTGTGTT+TGG | + | chr7.1:36956777-36956796 | MS.gene89254:intron | 45.0% |
| ! | ACCAGTGTTTAAGTGCTGCA+CGG | + | chr7.1:36957329-36957348 | MS.gene89254:intron | 45.0% |
| ! | AGAGACATTTAGGGTGTGCT+TGG | - | chr7.1:36957022-36957041 | None:intergenic | 45.0% |
| ! | TGTTCTCGGTTCAGTTGGTA+GGG | - | chr7.1:36956581-36956600 | None:intergenic | 45.0% |
| ! | TTTAGGGTGTGCTTGGATTG+AGG | - | chr7.1:36957015-36957034 | None:intergenic | 45.0% |
| AAGTCCATTTGTGAGCAGGG+TGG | + | chr7.1:36956154-36956173 | MS.gene89254:CDS | 50.0% | |
| AGGGATCGGAGTTCGAACTT+CGG | - | chr7.1:36956540-36956559 | None:intergenic | 50.0% | |
| ATCTCCACCCTGCTCACAAA+TGG | - | chr7.1:36956161-36956180 | None:intergenic | 50.0% | |
| CACACCCTCAGTGAAGTTTG+TGG | - | chr7.1:36956775-36956794 | None:intergenic | 50.0% | |
| GCCAAAAGTCCTTCTCTAGG+AGG | - | chr7.1:36957625-36957644 | None:intergenic | 50.0% | |
| GCTTGGATTGAGGGTTTAGG+AGG | - | chr7.1:36957005-36957024 | None:intergenic | 50.0% | |
| GGCAAGTCCATTTGTGAGCA+GGG | + | chr7.1:36956151-36956170 | MS.gene89254:CDS | 50.0% | |
| GTGTTCTCGGTTCAGTTGGT+AGG | - | chr7.1:36956582-36956601 | None:intergenic | 50.0% | |
| TAGGAGTGGAAGGGAGATGA+GGG | + | chr7.1:36956810-36956829 | MS.gene89254:intron | 50.0% | |
| TCCGTGCAGCACTTAAACAC+TGG | - | chr7.1:36957333-36957352 | None:intergenic | 50.0% | |
| TGGCAAGTCCATTTGTGAGC+AGG | + | chr7.1:36956150-36956169 | MS.gene89254:CDS | 50.0% | |
| TTAGGAGTGGAAGGGAGATG+AGG | + | chr7.1:36956809-36956828 | MS.gene89254:intron | 50.0% | |
| ! | AAAGAGCCTTGGCTCGTTTC+TGG | + | chr7.1:36956387-36956406 | MS.gene89254:CDS | 50.0% |
| ! | CGAGCCAAGGCTCTTTTGTA+AGG | - | chr7.1:36956383-36956402 | None:intergenic | 50.0% |
| ! | GCCTCCTAGAGAAGGACTTT+TGG | + | chr7.1:36957621-36957640 | MS.gene89254:CDS | 50.0% |
| ! | TCACTGAGGGTGTGTTTGGA+TGG | + | chr7.1:36956781-36956800 | MS.gene89254:intron | 50.0% |
| ! | TGAGGGTGTGTTTGGATGGA+AGG | + | chr7.1:36956785-36956804 | MS.gene89254:intron | 50.0% |
| ATTGAGGGTTTAGGAGGGGC+AGG | - | chr7.1:36956999-36957018 | None:intergenic | 55.0% | |
| CTTGGTCCAGAAACGAGCCA+AGG | - | chr7.1:36956396-36956415 | None:intergenic | 55.0% | |
| TTGAGGGTTTAGGAGGGGCA+GGG | - | chr7.1:36956998-36957017 | None:intergenic | 55.0% | |
| GGTTTAGGAGGGGCAGGGAG+AGG | - | chr7.1:36956993-36957012 | None:intergenic | 65.0% | |
| TAGGAGGGGCAGGGAGAGGA+GGG | - | chr7.1:36956989-36957008 | None:intergenic | 65.0% | |
| TTAGGAGGGGCAGGGAGAGG+AGG | - | chr7.1:36956990-36957009 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 36956110 | 36957687 | 36956110 | ID=MS.gene89254 |
| chr7.1 | mRNA | 36956110 | 36957687 | 36956110 | ID=MS.gene89254.t1;Parent=MS.gene89254 |
| chr7.1 | exon | 36956110 | 36956430 | 36956110 | ID=MS.gene89254.t1.exon1;Parent=MS.gene89254.t1 |
| chr7.1 | CDS | 36956110 | 36956430 | 36956110 | ID=cds.MS.gene89254.t1;Parent=MS.gene89254.t1 |
| chr7.1 | exon | 36957334 | 36957687 | 36957334 | ID=MS.gene89254.t1.exon2;Parent=MS.gene89254.t1 |
| chr7.1 | CDS | 36957334 | 36957687 | 36957334 | ID=cds.MS.gene89254.t1;Parent=MS.gene89254.t1 |
| Gene Sequence |
| Protein sequence |
